Miyakogusa Predicted Gene
- Lj0g3v0169949.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0169949.1 tr|G7I8F2|G7I8F2_MEDTR Annotation was added to
scaffolds in November 2011 Long-chain-fatty-acid-CoA
,89.15,0,Acetyl-CoA synthetase-like,NULL; no description,NULL;
AMP-binding,AMP-dependent synthetase/ligase; A,CUFF.10678.1
(1302 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC79284 similar to UniRef100_A7NVD1 Cluster: Chromosome... 452 e-126
gnl|LJGI|DC597857 similar to UniRef100_A7NVD1 Cluster: Chromosom... 436 e-121
gnl|LJGI|TC66710 similar to UniRef100_A7NVD1 Cluster: Chromosome... 307 9e-83
gnl|LJGI|TC73085 similar to UniRef100_A7NVD1 Cluster: Chromosome... 157 2e-37
gnl|LJGI|TC57488 similar to UniRef100_A7Q2X7 Cluster: Chromosome... 66 6e-10
>gnl|LJGI|TC79284 similar to UniRef100_A7NVD1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (18%)
Length = 378
Score = 452 bits (228), Expect = e-126
Identities = 336/372 (90%)
Strand = Plus / Plus
Query: 640 cgttttatactgtccggtggtgctcccctttctggtgatactcagcaattcatcaatatt 699
|||||||||||||| ||||||||||||||||||| |||||| || |||||||||||||
Sbjct: 7 cgttttatactgtctggtggtgctcccctttctgctgatacccaaagattcatcaatatt 66
Query: 700 tgtttcggtgctccaataggtcaaggatatggtcttacagagacttgtgctggggggaca 759
||| | |||||||||||||| |||||||||||||| ||||| ||||||||||| ||||||
Sbjct: 67 tgtcttggtgctccaataggacaaggatatggtctgacagaaacttgtgctggtgggaca 126
Query: 760 ttctctgattttgatgatacatctgttggccgtgttggaccacctctgccttgctcattt 819
|||||||||||||| |||||||||||||||||||||||||||||||| |||||||||| |
Sbjct: 127 ttctctgattttgacgatacatctgttggccgtgttggaccacctcttccttgctcatat 186
Query: 820 attaagctaatcgactggcccgaaggtggatatttaactactgacacaccaatggctcgt 879
||||||||||| |||||||| ||||||||||| | ||||| |||| | |||||| |||||
Sbjct: 187 attaagctaattgactggcctgaaggtggatactcaactaatgactcgccaatgcctcgt 246
Query: 880 ggtgaaattctaattggtggtccaaatgtcactcttgggtacttcaagaatgaagaaaag 939
||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 247 ggtgaaattgtggttggtggtccaaatgtcactcttgggtacttcaaaaatgaagaaaag 306
Query: 940 acaaaagaatcatataaggttgatgacagaggaatgagatggttctacactggtgacata 999
||||| ||||| || ||||||||||| |||||| | || ||||| |||||||||||||||
Sbjct: 307 acaaatgaatcttacaaggttgatgaaagaggagtaaggtggttttacactggtgacata 366
Query: 1000 gggagaattcat 1011
|||||| |||||
Sbjct: 367 gggagatttcat 378
>gnl|LJGI|DC597857 similar to UniRef100_A7NVD1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (17%)
Length = 574
Score = 436 bits (220), Expect = e-121
Identities = 220/220 (100%)
Strand = Plus / Plus
Query: 1 atggatgatgatatcccatctgttgcctcatctgttgaacatggatggacaatcacttcc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 atggatgatgatatcccatctgttgcctcatctgttgaacatggatggacaatcacttcc 414
Query: 61 tttgctgatgtcaagagacttggtaaagaaaatcctgttgatgcagatttacctctttca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 tttgctgatgtcaagagacttggtaaagaaaatcctgttgatgcagatttacctctttca 474
Query: 121 gcagatgttgcagttataatgtatacgagtggaagtaccggattacctaagggtgtgatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gcagatgttgcagttataatgtatacgagtggaagtaccggattacctaagggtgtgatg 534
Query: 181 atgacacatggcaatgtcttagctacagtctctgccgtga 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 atgacacatggcaatgtcttagctacagtctctgccgtga 574
>gnl|LJGI|TC66710 similar to UniRef100_A7NVD1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (24%)
Length = 926
Score = 307 bits (155), Expect = 9e-83
Identities = 299/347 (86%)
Strand = Plus / Plus
Query: 954 taaggttgatgacagaggaatgagatggttctacactggtgacatagggagaattcatcg 1013
|||||||||||| |||||| | || ||||| ||||||||||||||||||||| ||||||
Sbjct: 181 taaggttgatgaaagaggagtaaggtggttttacactggtgacatagggagatttcatct 240
Query: 1014 agatggttgtcttgaaatcattgatcgtaaaaaggacattgttaagctgcagcatggaga 1073
|||||||| ||||| ||||||||||| ||||||||||| ||||| ||||||||||||||
Sbjct: 241 ggatggttgccttgagatcattgatcgaaaaaaggacatagttaaactgcagcatggaga 300
Query: 1074 atatgtctccttgggaaaggttgaggcagctctcgttgttagcccctttgtggacaatat 1133
|||||| |||||||||||||||||||||||||| ||| ||||||||||||||||| ||
Sbjct: 301 atatgtgtccttgggaaaggttgaggcagctcttcttggaagcccctttgtggacaacat 360
Query: 1134 tatgttgcatgctgatcctttccatagttactgtgtggcacttgtggtggtttctcagtc 1193
||| |||||||||||||||| |||||||| |||||||||||||||| ||| ||| |
Sbjct: 361 catggtgcatgctgatccttttcatagttattgtgtggcacttgtggcagttcatcatcc 420
Query: 1194 cacattggaagaatgggcttcgaatcaaggaatttcgtattttgatttgtctgaactttg 1253
|| |||||| || |||| ||| || || |||||| | |||| |||||| || ||||| ||
Sbjct: 421 caaattggaggattgggtttcaaagcatggaattgcttattctgatttttcagaactgtg 480
Query: 1254 cacgaaagaagaaactgtgaaggaggtgcatgcatcacttgttaagg 1300
|| ||||| ||||||||||| ||||||||||| |||||||| ||||
Sbjct: 481 cagcaaagatgaaactgtgaaagaggtgcatgcgtcacttgtaaagg 527
>gnl|LJGI|TC73085 similar to UniRef100_A7NVD1 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (11%)
Length = 613
Score = 157 bits (79), Expect = 2e-37
Identities = 79/79 (100%)
Strand = Plus / Minus
Query: 1222 ggaatttcgtattttgatttgtctgaactttgcacgaaagaagaaactgtgaaggaggtg 1281
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ggaatttcgtattttgatttgtctgaactttgcacgaaagaagaaactgtgaaggaggtg 493
Query: 1282 catgcatcacttgttaagg 1300
|||||||||||||||||||
Sbjct: 492 catgcatcacttgttaagg 474
>gnl|LJGI|TC57488 similar to UniRef100_A7Q2X7 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (35%)
Length = 1053
Score = 65.9 bits (33), Expect = 6e-10
Identities = 120/149 (80%)
Strand = Plus / Plus
Query: 955 aaggttgatgacagaggaatgagatggttctacactggtgacatagggagaattcatcga 1014
||||||||||| | ||| ||| | ||||| ||||| |||||||| ||| | |||||
Sbjct: 255 aaggttgatgagaaaggtatgcgctggttttacaccggtgacattgggcaatttcattct 314
Query: 1015 gatggttgtcttgaaatcattgatcgtaaaaaggacattgttaagctgcagcatggagaa 1074
||||| || ||||||||||||||| | |||||||| ||||| || || || ||||| |||
Sbjct: 315 gatggatgccttgaaatcattgatagaaaaaaggatattgtcaaacttcaacatggggaa 374
Query: 1075 tatgtctccttgggaaaggttgaggcagc 1103
||| | || | |||||||||||||||||
Sbjct: 375 tatctatctcttggaaaggttgaggcagc 403