Miyakogusa Predicted Gene

Lj0g3v0163069.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0163069.1 Non Chatacterized Hit- tr|B6TZL4|B6TZL4_MAIZE
Putative uncharacterized protein OS=Zea mays PE=2
SV=1,33.88,4e-18,seg,NULL,CUFF.10160.1
         (681 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|BP035370 similar to UniRef100_A7NUZ1 Cluster: Chromosom...   597   e-170

>gnl|LJGI|BP035370 similar to UniRef100_A7NUZ1 Cluster: Chromosome chr18 scaffold_1,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr18 scaffold_1, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (20%)
          Length = 563

 Score =  597 bits (301), Expect = e-170
 Identities = 301/301 (100%)
 Strand = Plus / Minus

                                                                       
Query: 381 gaagaagatcaggaaagaagacagcgatgacatgagtgagaagaagaagaattctggttc 440
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gaagaagatcaggaaagaagacagcgatgacatgagtgagaagaagaagaattctggttc 504

                                                                       
Query: 441 cctcttgattgaatcaagcaataacaaaaaggattcatgtgttttaactcaaactccatc 500
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 cctcttgattgaatcaagcaataacaaaaaggattcatgtgttttaactcaaactccatc 444

                                                                       
Query: 501 atggttatcatcagaaggtgatgatcacaatgagatgatcgcagcagtttgcatgaggtg 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 atggttatcatcagaaggtgatgatcacaatgagatgatcgcagcagtttgcatgaggtg 384

                                                                       
Query: 561 tcacttgttggtgatgctttgcaaatcatctccttcatgcccaaactgcaaattcatgca 620
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 tcacttgttggtgatgctttgcaaatcatctccttcatgcccaaactgcaaattcatgca 324

                                                                       
Query: 621 cccaccagatcagagcccttcacagttcttgaagagaagaaggttcagcctcttgtgctg 680
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cccaccagatcagagcccttcacagttcttgaagagaagaaggttcagcctcttgtgctg 264

            
Query: 681 a 681
           |
Sbjct: 263 a 263