Miyakogusa Predicted Gene

Lj0g3v0161639.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0161639.1 tr|F2E2N0|F2E2N0_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,47.27,3e-18,Tudor/PWWP/MBT,NULL; seg,NULL; PWWP,PWWP; no
description,NULL,NODE_101934_length_723_cov_12.434301.path1.1
         (627 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC74554 similar to UniRef100_A7PBE8 Cluster: Chromosome...   720   0.0  

>gnl|LJGI|TC74554 similar to UniRef100_A7PBE8 Cluster: Chromosome chr16 scaffold_10,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr16 scaffold_10, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (13%)
          Length = 575

 Score =  720 bits (363), Expect = 0.0
 Identities = 366/367 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggattacggcgtgggatccatcgtgtgggtccgacgacgaaacgggtcgtggtggccg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 209 atggattacggcgtgggatccatcgtgtgggtccgacgacgaaacgggtcgtggtggccg 268

                                                                       
Query: 61  ggtcaaatacttggcctcgatgatctctccgcttctcatctcacctctcctcgatcagga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 269 ggtcaaatacttggcctcgatgatctctccgcttctcatctcacctctcctcgatcagga 328

                                                                       
Query: 121 acccccgtcaagcttctcggccgggaagacgccagcgtggattggtacaatttggagaaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 329 acccccgtcaagcttctcggccgggaagacgccagcgtggattggtacaatttggagaaa 388

                                                                       
Query: 181 tctaagcgtgttaaggcgttccgatgtggcgagtttgatgattgtattgagaaggctgag 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 389 tctaagcgtgttaaggcgttccgatgtggcgagtttgatgattgtattgagaaggctgag 448

                                                                       
Query: 241 tccgctcagggggcgccgttgaagaaaagggagaaatatgcgcgtcgagaagatgccatt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 449 tccgctcagggggcgccgttgaagaaaagggagaaatatgcgcgtcgagaagatgccatt 508

                                                                       
Query: 301 cttcatgcccttgaactcgagaggcaaatgttgcagaagcaagcgaaaatagaggtagca 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 509 cttcatgcccttgaactcgagaggcaaatgttgcagaagcaagcgaaaatagaggtagcg 568

                  
Query: 361 aaggatg 367
           |||||||
Sbjct: 569 aaggatg 575