Miyakogusa Predicted Gene

Lj0g3v0158249.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0158249.1 Non Chatacterized Hit- tr|D8RUG2|D8RUG2_SELML
Putative uncharacterized protein (Fragment)
OS=Selagin,51.85,5e-19,seg,NULL,CUFF.9931.1
         (396 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC63594 similar to UniRef100_A7P5Q3 Cluster: Chromosome...   718   0.0  

>gnl|LJGI|TC63594 similar to UniRef100_A7P5Q3 Cluster: Chromosome chr4 scaffold_6,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr4 scaffold_6, whole genome shotgun
           sequence - Vitis vinifera (Grape), complete
          Length = 880

 Score =  718 bits (362), Expect = 0.0
 Identities = 375/378 (99%), Gaps = 1/378 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggcgacgacctccaagaccacggtttccaagaccacggtatcaccttcttcttcatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42  atggcgacgacctccaagaccacggtttccaagaccacggtatcaccttcttcttcatca 101

                                                                       
Query: 61  tcgaagagttggacgaagaatgtttcatcaattgcagctcgcatctacttcctcctcatc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 tcgaagagttggacgaagaatgtttcatcaattgcagctcgcatctacttcctcctcatc 161

                                                                       
Query: 121 ctcttccagatccctcttttcagggtgacttgcagatctggtgtgtgtacaaatccttta 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 ctcttccagatccctcttttcagggtgacttgcagatctggtgtgtgtacaaatccttta 221

                                                                       
Query: 181 catgtaacatcgtcacagttgattgcgagtgagatcttccctgttcctgttgtcaagggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 catgtaacatcgtcacagttgattgcgagtgagatcttccctgttcctgttgtcaagggc 281

                                                                       
Query: 241 cttctgtaccctggtgctgttgtgcatggcctcatccacaatatgagtgttccaagctgg 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 282 cttctgtaccctggtgctgttgtgcatggcctcatccacaatatgagtgttccaagttgg 341

                                                                       
Query: 301 ggaaatttgttggagacgtataacttgaccgctgtcaagaatgcttctgcagtcactgat 360
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 ggaaatttgttggagtcgtataacttgaccgctgtcaagaatgcttctgcagtcactgat 401

                             
Query: 361 cttc-acgattggaggtt 377
           |||| |||||||||||||
Sbjct: 402 cttcaacgattggaggtt 419