Miyakogusa Predicted Gene
- Lj0g3v0127389.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0127389.1 Non Chatacterized Hit- tr|D8T6S5|D8T6S5_SELML
Putative uncharacterized protein EID1-2
OS=Selaginella,32.12,8e-17,seg,NULL; F-box domain,F-box domain,
cyclin-like; no description,NULL; F-box-like,NULL,CUFF.7662.1
(940 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC59770 similar to UniRef100_A7Q0C0 Cluster: Chromosome... 1120 0.0
gnl|LJGI|TC77922 similar to UniRef100_A7Q0C0 Cluster: Chromosome... 359 2e-98
>gnl|LJGI|TC59770 similar to UniRef100_A7Q0C0 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (59%)
Length = 1258
Score = 1120 bits (565), Expect = 0.0
Identities = 565/565 (100%)
Strand = Plus / Plus
Query: 369 cgaatcctccggttggtccctcttcgatgaccttttctacgacaccgtctacgccgcctc 428
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 cgaatcctccggttggtccctcttcgatgaccttttctacgacaccgtctacgccgcctc 499
Query: 429 tgaatccatccaaccaccacaacaatcacaaccaccgcaaccctcgtcggaggaggtggt 488
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tgaatccatccaaccaccacaacaatcacaaccaccgcaaccctcgtcggaggaggtggt 559
Query: 489 gcgtcagggtgttgttgcggaggcgcgtgagacaaagaagcggaaggtatgcggggcgcg 548
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 gcgtcagggtgttgttgcggaggcgcgtgagacaaagaagcggaaggtatgcggggcgcg 619
Query: 549 ggggtcccatttggctaccgggacatggaacctgagcagggaacaagggagcaagcttct 608
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ggggtcccatttggctaccgggacatggaacctgagcagggaacaagggagcaagcttct 679
Query: 609 cgcgaggcagtttcgcgatgactgtctctacgtctgcgattggcctggttgcgttcactc 668
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 cgcgaggcagtttcgcgatgactgtctctacgtctgcgattggcctggttgcgttcactc 739
Query: 669 tgaggagaagaggaagtacatgctcttcagaggggttttcaagaatttcaaacggacgag 728
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tgaggagaagaggaagtacatgctcttcagaggggttttcaagaatttcaaacggacgag 799
Query: 729 ggtttggaggaccatcaatgatgggaatcggaggaagcttgatctgccatgtgcgttctg 788
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ggtttggaggaccatcaatgatgggaatcggaggaagcttgatctgccatgtgcgttctg 859
Query: 789 cgcgtgtaaacacacctgggatctgcactctgctttctgcttgaggcggggtttcgggtt 848
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 cgcgtgtaaacacacctgggatctgcactctgctttctgcttgaggcggggtttcgggtt 919
Query: 849 tcatgatgatggggagcctgtggttcgagcatttgtctgtgacaatggccatgtttctgg 908
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 920 tcatgatgatggggagcctgtggttcgagcatttgtctgtgacaatggccatgtttctgg 979
Query: 909 agcttggaccgatgtgcccatgtac 933
|||||||||||||||||||||||||
Sbjct: 980 agcttggaccgatgtgcccatgtac 1004
Score = 579 bits (292), Expect = e-164
Identities = 292/292 (100%)
Strand = Plus / Plus
Query: 1 atgccgttgttctctgcattgaccgacgacatcgtcctcaacatcttcgccaagctggaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 72 atgccgttgttctctgcattgaccgacgacatcgtcctcaacatcttcgccaagctggaa 131
Query: 61 gacgatcctcgtgattgggcacgcctctcctgcgtctgcaccagattctcttctctcatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 gacgatcctcgtgattgggcacgcctctcctgcgtctgcaccagattctcttctctcatc 191
Query: 121 accgatttctgttggaagaacaagtgctctcgctccatccctcccgatctcctctccgcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 accgatttctgttggaagaacaagtgctctcgctccatccctcccgatctcctctccgcc 251
Query: 181 accgatccgccgctctccctgcacaaactctgcctctgctgccccggcctcctccacgcc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 accgatccgccgctctccctgcacaaactctgcctctgctgccccggcctcctccacgcc 311
Query: 241 ggcctcctcttcgacacctccgatttcggtctcgatcgtgacctcggccccg 292
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ggcctcctcttcgacacctccgatttcggtctcgatcgtgacctcggccccg 363
>gnl|LJGI|TC77922 similar to UniRef100_A7Q0C0 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (15%)
Length = 476
Score = 359 bits (181), Expect = 2e-98
Identities = 184/185 (99%)
Strand = Plus / Plus
Query: 756 tcggaggaagcttgatctgccatgtgcgttctgcgcgtgtaaacacacctgggatctgca 815
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tcggaggaagcttgatctgccatgtgcgttctgcgcgtgtaaacacacctgggatctgca 60
Query: 816 ctctgctttctgcttgaggcggggtttcgggtttcatgatgatggggagcctgtggttcg 875
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctctgctttctgcttgaggcggggtttcgggtttcatgatgatggggagcctgtggttcg 120
Query: 876 agcatttgtctgtgacaatggccatgtttctggagcttggaccgatgtgcccatgtacgc 935
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 agcatttgtctgtgaccatggccatgtttctggagcttggaccgatgtgcccatgtacgc 180
Query: 936 ttgat 940
|||||
Sbjct: 181 ttgat 185