Miyakogusa Predicted Gene
- Lj0g3v0111069.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0111069.1 tr|F2EK34|F2EK34_HORVD Predicted protein
OS=Hordeum vulgare var. distichum PE=2
SV=1,29,1e-18,PPR_2,Pentatricopeptide repeat; PPR,Pentatricopeptide
repeat; PPR_1,Pentatricopeptide repeat; FAMILY,CUFF.6416.1
(1012 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65116 weakly similar to UniRef100_A7PSX6 Cluster: Chr... 1172 0.0
>gnl|LJGI|TC65116 weakly similar to UniRef100_A7PSX6 Cluster: Chromosome chr8
scaffold_29, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr8 scaffold_29, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (25%)
Length = 750
Score = 1172 bits (591), Expect = 0.0
Identities = 603/607 (99%)
Strand = Plus / Plus
Query: 1 atgaggactcacatgaaaaacttagtttcaagactctctgtacctacatggatcacacac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 atgaggactcacatgaaaaacttagtttcaagactctctgtacctacatggatcacacac 203
Query: 61 caagtagtttcttgtcgctatataaccaaaaccgttcatacccattatcattcccttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 caagtagtttcttgtcgctatataaccaaaaccgttcatacccattatcattcccttgcc 263
Query: 121 accaagcatgagaacaccgttgtacaaaaagacattattccatatggtcttgatccaacc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 accaagcatgagaacaccgttgtacaaaaagacattattccatatggtcttgatccaacc 323
Query: 181 acttttcaagtcgcctgccacatgtttgatgaaatatctgacttgactggtgaatcagcc 240
||||||||||| ||||||||||||||||||||||| ||||||||||||| ||||||||||
Sbjct: 324 acttttcaagttgcctgccacatgtttgatgaaatgtctgacttgactgttgaatcagcc 383
Query: 241 accaccataatttgcggcttcgccaagcggcactgccatgaagacgctattcatcttttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 accaccataatttgcggcttcgccaagcggcactgccatgaagacgctattcatcttttc 443
Query: 301 tcaagaatgcttgcctccaaaattagacccaatgagttcacatttgggactgtgcttcac 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcaagaatacttgcctccaaaattagacccaatgagttcacatttgggactgtgcttcac 503
Query: 361 tcctccactgtactcagaaatgttgttattggtaggcagcttcatgcttgtgcaacaaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcctccactgtactcagaaatgttgttattggtaggcagcttcatgcttgtgcaacaaaa 563
Query: 421 attggccttgcttctaatgtatttgttggtagtgcacttcttgatttgtatgtcaagttg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 attggccttgcttctaatgtatttgttggtagtgcacttcttgatttgtatgtcaagttg 623
Query: 481 agtactatagaagaagcccagaaggctttcggagatacccaacatcccaatgtggtgtct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agtactatagaagaagcccagaaggctttcggagatacccaacatcccaatgtggtgtct 683
Query: 541 tatacagctctggtttgtgggtatttgaagagaggtaggtttgaagatgctttgcaggtt 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 tatacagctctggtttgtgggtatttgaagagaggtaggtttgaagatgctttgcaggtt 743
Query: 601 tttcatg 607
|||||||
Sbjct: 744 tttcatg 750