Miyakogusa Predicted Gene

Lj0g3v0109989.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0109989.1 Non Chatacterized Hit- tr|I1JI38|I1JI38_SOYBN
Uncharacterized protein OS=Glycine max GN=Gma.52244
PE,70.3,0,seg,NULL; PRONE,Plant specific Rop nucleotide exchanger,
PRONE; SUBFAMILY NOT NAMED,NULL; FAMILY NOT,CUFF.6333.1
         (606 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|FS327751 weakly similar to UniRef100_A7PIJ5 Cluster: Ch...   803   0.0  

>gnl|LJGI|FS327751 weakly similar to UniRef100_A7PIJ5 Cluster: Chromosome chr13
           scaffold_17, whole genome shotgun sequence; n=1; Vitis
           vinifera|Rep: Chromosome chr13 scaffold_17, whole genome
           shotgun sequence - Vitis vinifera (Grape), partial (12%)
          Length = 646

 Score =  803 bits (405), Expect = 0.0
 Identities = 408/409 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   atggaaagtttgagcaacaagggtgaaaatatgcagaagaagagagatgggtatcgttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 238 atggaaagtttgagcaacaagggtgaaaatatgcagaagaagagagatgggtatcgttca 297

                                                                       
Query: 61  cctcgttctgctgctaagggagctaaggtggttaacaagtccttcactggttccagtggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 cctcgttctgctgctaagggagctaaggtggttaacaagtccttcactggttccagtggt 357

                                                                       
Query: 121 gggtcgtgctcctctgtttcaactgaagaacctaaagcggctaaagggtcttctccttct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 gggtcgtgctcctctgtttcaactgaagaacctaaagcggctaaagggtcttctccttct 417

                                                                       
Query: 181 cctgctccttctcctcttggttggcctattcggaaggctgcggtttccaaacgtgggaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 cctgctccttctcctcttggttggcctattcggaaggctgcggtttccaaacgtgggaaa 477

                                                                       
Query: 241 tcagatgagaaagaaaatgaacctgtttctcacttggaagatgctaaaattaccagtgtc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tcagatgagaaagaaaatgaacctgtttctcacttggaagatgctaaaattaccagtgtc 537

                                                                       
Query: 301 agttcaaaaatgtctggggttggtatgatgaaggaaaggtttgcaaaattgctgcttggt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 agttcaaaaatgtctggggttggtatgatgaaggaaaggtttgcaaaattgctgcttggt 597

                                                            
Query: 361 gaagatatgtcaggatctggaaaaggagtttgcactgctttggccatct 409
           ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 598 gaagatatgtcaggacctggaaaaggagtttgcactgctttggccatct 646