Miyakogusa Predicted Gene
- Lj0g3v0109639.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0109639.1 tr|G7JIV4|G7JIV4_MEDTR DUF246 domain-containing
protein OS=Medicago truncatula GN=MTR_4g100810 PE=4
,83.93,0,O-FucT,GDP-fucose protein O-fucosyltransferase; FAMILY NOT
NAMED,NULL,CUFF.6305.1
(1617 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC65437 similar to UniRef100_O23508 Cluster: Growth reg... 1271 0.0
gnl|LJGI|TC60175 similar to UniRef100_O23508 Cluster: Growth reg... 692 0.0
gnl|LJGI|DC593118 similar to UniRef100_Q8Y011 Cluster: Probable ... 88 2e-16
gnl|LJGI|TC81975 similar to UniRef100_A7P8K2 Cluster: Chromosome... 56 7e-07
>gnl|LJGI|TC65437 similar to UniRef100_O23508 Cluster: Growth regulator like protein;
n=1; Arabidopsis thaliana|Rep: Growth regulator like
protein - Arabidopsis thaliana (Mouse-ear cress),
partial (13%)
Length = 931
Score = 1271 bits (641), Expect = 0.0
Identities = 641/641 (100%)
Strand = Plus / Plus
Query: 1 atgggtgtggtggggaaagcgtggttgttgcaccacactcaccctagctcatggtcggtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 atgggtgtggtggggaaagcgtggttgttgcaccacactcaccctagctcatggtcggtg 350
Query: 61 atttgcgggttgatgctgttcggattgggtctcatttcactctttacgggtcatgtggct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 atttgcgggttgatgctgttcggattgggtctcatttcactctttacgggtcatgtggct 410
Query: 121 tctcatcttgaatggtactctcatagattcggccaccaccgcagtttatactcttcactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 tctcatcttgaatggtactctcatagattcggccaccaccgcagtttatactcttcactg 470
Query: 181 gatgggaatgatcgcgcgccaatcgatatttggaaatcacattactctaaatactactat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 471 gatgggaatgatcgcgcgccaatcgatatttggaaatcacattactctaaatactactat 530
Query: 241 ggatgcaaagaaagggggcgcgattatgctcctgctgtgcgagagcacaagtcaaatgga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 531 ggatgcaaagaaagggggcgcgattatgctcctgctgtgcgagagcacaagtcaaatgga 590
Query: 301 tacttgcttattgcaacgagtggaggactgaaccaacagagaactgggataactgatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tacttgcttattgcaacgagtggaggactgaaccaacagagaactgggataactgatgct 650
Query: 361 gttgttgttgcccggattcttaatgctacactaattgtacctgagttggaccatcattct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 gttgttgttgcccggattcttaatgctacactaattgtacctgagttggaccatcattct 710
Query: 421 ttttggaaggatgacagtgacttcgccaatatttttgatattaattggttcattacttat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 ttttggaaggatgacagtgacttcgccaatatttttgatattaattggttcattacttat 770
Query: 481 ctcgcaagagatgttactattattaaaagagttccaaataaaatcatgcggtcaatggag 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 771 ctcgcaagagatgttactattattaaaagagttccaaataaaatcatgcggtcaatggag 830
Query: 541 aaacccccatatacgatgcgtgtcccaaggaaatcagaccctgaatattatcttgatcaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 831 aaacccccatatacgatgcgtgtcccaaggaaatcagaccctgaatattatcttgatcaa 890
Query: 601 gttttgccaatactcttgagacgacgggttttgcagttgac 641
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 891 gttttgccaatactcttgagacgacgggttttgcagttgac 931
>gnl|LJGI|TC60175 similar to UniRef100_O23508 Cluster: Growth regulator like protein;
n=1; Arabidopsis thaliana|Rep: Growth regulator like
protein - Arabidopsis thaliana (Mouse-ear cress), partial
(7%)
Length = 766
Score = 692 bits (349), Expect = 0.0
Identities = 358/361 (99%)
Strand = Plus / Plus
Query: 1257 caaaagaaccattagaccaaatgcaaagaagcttagcgcgctgttcatggcaaggaatga 1316
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1 caaaagaaccattagaccaaatgcaaagaagcttagcgcgctgttcatggcaaggcatga 60
Query: 1317 gatggagtgggatacctttgccaaaaaggttaaggaatgccaaagacaattcatggaaga 1376
|||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 61 gatggagtgggatacctttgccaaaaaggttaaggaatgccaaagagaattcatgggaga 120
Query: 1377 gccaggtgagataaaacctggacgattagagtttcatgaatatccaagcacttgtctctg 1436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 gccaggtgagataaaacctggacgattagagtttcatgaatatccaagcacttgtctctg 180
Query: 1437 tgagaaaccatttatagatgaagtgagtgaagatggataccgtccccctaaactagcagc 1496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 tgagaaaccatttatagatgaagtgagtgaagatggataccgtccccctaaactagcagc 240
Query: 1497 acccaaaaacctgacaatgaaggtagaagactatgaaatgaatggtgaccatgaagaaag 1556
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 acccaaaaacctgacaatgaaggtagaagactatgaaatgaatggtgaccatgaagaaag 300
Query: 1557 tgctgtactaccaaaaccaggtaggagaaggattcagcacatgatgaaagatgagtaact 1616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgctgtactaccaaaaccaggtaggagaaggattcagcacatgatgaaagatgagtaact 360
Query: 1617 t 1617
|
Sbjct: 361 t 361
>gnl|LJGI|DC593118 similar to UniRef100_Q8Y011 Cluster: Probable methyl-accepting
chemotaxis transmembrane protein; n=1; Ralstonia
solanacearum|Rep: Probable methyl-accepting chemotaxis
transmembrane protein - Ralstonia solanacearum
(Pseudomonas solanacearum), partial (4%)
Length = 571
Score = 87.7 bits (44), Expect = 2e-16
Identities = 80/92 (86%)
Strand = Plus / Plus
Query: 49 tcatggtcggtgatttgcgggttgatgctgttcggattgggtctcatttcactctttacg 108
|||||||| ||| ||||||| |||||||||||||| |||||||| ||||| || | |||
Sbjct: 377 tcatggtctgtggtttgcggattgatgctgttcgggttgggtctgatttctcttctcacg 436
Query: 109 ggtcatgtggcttctcatcttgaatggtactc 140
||||| |||||||| ||||||||||||||||
Sbjct: 437 ggtcacatggcttctgatcttgaatggtactc 468
>gnl|LJGI|TC81975 similar to UniRef100_A7P8K2 Cluster: Chromosome chr3 scaffold_8,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr3 scaffold_8, whole genome shotgun sequence
- Vitis vinifera (Grape), partial (34%)
Length = 1121
Score = 56.0 bits (28), Expect = 7e-07
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1172 tttgtgatgaaagtaacgtatttgtcactaacaacaatggcaacatggccagaattcttg 1231
||||||||| ||| |||| |||||||| ||||||||||| |||||||| | |||| | |
Sbjct: 234 tttgtgatggcagtgacgtttttgtcacaaacaacaatggtaacatggctaaaattttag 293
Query: 1232 ctggtcgaaggaggta 1247
|||| ||||||||||
Sbjct: 294 ctggaagaaggaggta 309