Miyakogusa Predicted Gene
- Lj0g3v0108459.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0108459.2 Non Chatacterized Hit- tr|H2ZU33|H2ZU33_LATCH
Uncharacterized protein OS=Latimeria chalumnae
GN=FBXO,25.19,2e-17,ApaG-like,ApaG domain; F-box domain,F-box domain,
cyclin-like; FBOX,F-box domain, cyclin-like; APAG,,CUFF.6249.2
(1086 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC62615 weakly similar to UniRef100_A7QYR3 Cluster: Chr... 1041 0.0
gnl|LJGI|TC81284 similar to UniRef100_A7QYQ9 Cluster: Chromosome... 531 e-150
gnl|LJGI|BI420918 similar to UniRef100_A7QYR1 Cluster: Chromosom... 214 9e-55
>gnl|LJGI|TC62615 weakly similar to UniRef100_A7QYR3 Cluster: Chromosome chr5
scaffold_253, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr5 scaffold_253, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (60%)
Length = 755
Score = 1041 bits (525), Expect = 0.0
Identities = 525/525 (100%)
Strand = Plus / Plus
Query: 1 atgatggggttggaaacggtggttgatttggcgattcacgatgttctgaggaggctcagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 78 atgatggggttggaaacggtggttgatttggcgattcacgatgttctgaggaggctcagc 137
Query: 61 cctgaagacattgccagagtcgcatgtgtgagcaagaagttgaggtctctagccttcgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 138 cctgaagacattgccagagtcgcatgtgtgagcaagaagttgaggtctctagccttcgat 197
Query: 121 gatgactctctttggctcacaatctgcatcagtgaactcgatttgcatcagcctcttgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 198 gatgactctctttggctcacaatctgcatcagtgaactcgatttgcatcagcctcttgat 257
Query: 181 catctcggaaaccctcttccttccttcaaggcaacttatcaagcttggagagaagctttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 catctcggaaaccctcttccttccttcaaggcaacttatcaagcttggagagaagctttt 317
Query: 241 gctatgtatccttggtctcttgttaagcgtgtaaaacagtgctgggacaaattaaagacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gctatgtatccttggtctcttgttaagcgtgtaaaacagtgctgggacaaattaaagacc 377
Query: 301 tggctggttaataattttccagaagctgaggccactctttgtaaaggtgcatctgaagct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 378 tggctggttaataattttccagaagctgaggccactctttgtaaaggtgcatctgaagct 437
Query: 361 gagatactagagttggagaatgtcttagaagtgaaattacctcttcctacaaggatcctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 gagatactagagttggagaatgtcttagaagtgaaattacctcttcctacaaggatcctt 497
Query: 421 taccgctttcataacgggcaagaaattgcaaatggagatctagaatctgatacatttggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 498 taccgctttcataacgggcaagaaattgcaaatggagatctagaatctgatacatttggc 557
Query: 481 agttcattgggtctaattggtggctactccttctatagtcatttg 525
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 558 agttcattgggtctaattggtggctactccttctatagtcatttg 602
>gnl|LJGI|TC81284 similar to UniRef100_A7QYQ9 Cluster: Chromosome chr5 scaffold_253,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_253, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (77%)
Length = 362
Score = 531 bits (268), Expect = e-150
Identities = 278/280 (99%), Gaps = 1/280 (0%)
Strand = Plus / Plus
Query: 808 agctcttgtcagctacattggaggcattggatcatccgtgctaatgatattgtagtatct 867
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 agctcttgtcagctacattggaggcattggatcatccgtgctaatgatattgtagtatct 60
Query: 868 gatgtcaatggagaagctgttataggaatgttcccacttttacgtccaggtgctgaagaa 927
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 gatgtcaatggagaagctgttataggaatgttcccacttttacgtccaggtgctgaagaa 120
Query: 928 tttgtttatcagagttgcacatatcttccaacatcatcaggttccgtcgaaggctctttt 987
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 tttgtttatcagagttgcacatatcttccaacatcatcaggttccgtcgaaggctctttt 180
Query: 988 acatttgtacctggcagattggcaaacccaaaaggagactctttcctagccacagtggac 1047
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 181 acatttgtacctggcagattggcaaaccccaaaggagactctttcctagccacagtggac 240
Query: 1048 cgc-ttccctattcagcttccagactatattttctgattt 1086
||| ||||||||||||||||||||||||||||||||||||
Sbjct: 241 cgctttccctattcagcttccagactatattttctgattt 280
>gnl|LJGI|BI420918 similar to UniRef100_A7QYR1 Cluster: Chromosome chr5 scaffold_253,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr5 scaffold_253, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (54%)
Length = 580
Score = 214 bits (108), Expect = 9e-55
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 897 gttcccacttttacgtccaggtgctgaagaatttgtttatcagagttgcacatatcttcc 956
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8 gttcccacttttacgtccaggtgctgaagaatttgtttatcagagttgcacatatcttcc 67
Query: 957 aacatcatcaggttccgtcgaaggctcttttacatttgtacctggcag 1004
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68 aacatcatcaggttccgtcgaaggctcttttacatttgtacctggcag 115