Miyakogusa Predicted Gene

Lj0g3v0106709.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0106709.1 Non Chatacterized Hit- tr|I3TA62|I3TA62_LOTJA
Uncharacterized protein OS=Lotus japonicus PE=2
SV=1,73.91,0.0000000005,seg,NULL,CUFF.6084.1
         (178 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC64964 similar to UniRef100_A8MQD8 Cluster: Uncharacte...   109   6e-24

>gnl|LJGI|TC64964 similar to UniRef100_A8MQD8 Cluster: Uncharacterized protein
           At5g10780.2; n=1; Arabidopsis thaliana|Rep:
           Uncharacterized protein At5g10780.2 - Arabidopsis
           thaliana (Mouse-ear cress), partial (76%)
          Length = 886

 Score =  109 bits (55), Expect = 6e-24
 Identities = 106/123 (86%)
 Strand = Plus / Plus

                                                                       
Query: 5   agaaaggaaagggagcgatgggatcagcgtcgggacgaagatggggcattggtttcattg 64
           |||| ||||||||| ||||||||||||| || ||| ||||||||||| |  |||||  ||
Sbjct: 66  agaagggaaagggaccgatgggatcagcatcaggaagaagatggggcgtcagtttctctg 125

                                                                       
Query: 65  gcaattcaacttctcgcggtattccccatcctcctggtttttcttgcacttctctcgaac 124
            ||||||||||||||||| ||||||| |||| |||||||| ||| || ||||||||||||
Sbjct: 126 acaattcaacttctcgcgatattcccgatccccctggtttctctcgcgcttctctcgaac 185

              
Query: 125 agg 127
           |||
Sbjct: 186 agg 188