Miyakogusa Predicted Gene

Lj0g3v0102309.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0102309.1 Non Chatacterized Hit- tr|I1JFH6|I1JFH6_SOYBN
Uncharacterized protein OS=Glycine max PE=4 SV=1,74.14,0,SUBFAMILY NOT
NAMED,NULL; FAMILY NOT NAMED,NULL; GH3,GH3 auxin-responsive
promoter,CUFF.5768.1
         (1827 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC77138 similar to UniRef100_A7Q094 Cluster: Chromosome...   765   0.0  

>gnl|LJGI|TC77138 similar to UniRef100_A7Q094 Cluster: Chromosome chr7 scaffold_42,
            whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
            Chromosome chr7 scaffold_42, whole genome shotgun
            sequence - Vitis vinifera (Grape), partial (19%)
          Length = 866

 Score =  765 bits (386), Expect = 0.0
 Identities = 410/418 (98%)
 Strand = Plus / Plus

                                                                        
Query: 1410 tcaaaatgttctcctagtggactacaccagttatcctgatacttgtttagcaccaggaca 1469
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1    tcaaaatgttctcctagtggactacaccagttatcctgatacttgtttagcaccaggaca 60

                                                                        
Query: 1470 ctacgtattgtactgggaaattctgcatcagaacacaaaaaagacagagtcaggagcctc 1529
            |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 61   ctacgtattgtactgggaaattctgcatcagaacaccaaaaagacagagtcaggagcctc 120

                                                                        
Query: 1530 acttgatacaaatgtgcttcaggaatgctgcattgcggttgaagagcaactggactacgt 1589
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121  acttgataccaatgtgcttcaggaatgctgcattgcggttgaagagcaactggactacgt 180

                                                                        
Query: 1590 atattgtcatttgcgcaatgacgggtcaatagggccacttgagatacgcgtggtagaggc 1649
            |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 181  atattgtcatttgcgccatgacgggtccatagggccacttgagatacgcgtggtagaggc 240

                                                                        
Query: 1650 aggaacatttgatacattgttggacttgttcattagcctaggagcttcaatcaatcagta 1709
            |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 241  aggaacatttgatacattgttggacttgttcattagcctaggagcttcaatccatcagta 300

                                                                        
Query: 1710 caaaacgccaaggggcattaagtctgataaagcacttaacctgctcaactctaaagttac 1769
            | ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301  ccaaacgcccaggggcattaagtctgataaagcacttaacctgctcaactctaaagttac 360

                                                                      
Query: 1770 tgcttcttttttcagccctagatatcccaaatggggatctaagaaggtgtcttaagtt 1827
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 361  tgcttcttttttcagccctagatatccccaatggggatctaagaaggtgtcttaagtt 418