Miyakogusa Predicted Gene
- Lj0g3v0088659.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0088659.1 Non Chatacterized Hit- tr|D8U117|D8U117_VOLCA
Putative uncharacterized protein OS=Volvox carteri
GN=,43.69,6e-17,T-COMPLEX 11-RELATED,NULL; TESTIS-SPECIFIC PROTEIN
PBS13 (T-COMPLEX 11 ),T-complex 11;
Tcp11,T-compl,NODE_14568_length_2376_cov_188.041245.path3.1
(1668 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC82631 weakly similar to UniRef100_A7PYI6 Cluster: Chr... 1148 0.0
gnl|LJGI|TC68146 similar to UniRef100_A7PYI6 Cluster: Chromosome... 1076 0.0
>gnl|LJGI|TC82631 weakly similar to UniRef100_A7PYI6 Cluster: Chromosome chr12
scaffold_38, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr12 scaffold_38, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (20%)
Length = 817
Score = 1148 bits (579), Expect = 0.0
Identities = 579/579 (100%)
Strand = Plus / Plus
Query: 1086 tgttaatgaatttgtccatgagcatcaccgtagttttgctgatggccttgatgtatctga 1145
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tgttaatgaatttgtccatgagcatcaccgtagttttgctgatggccttgatgtatctga 60
Query: 1146 tcacattcaaaacagcattgaggggaatataataaaacagacaatggagaaggccttttg 1205
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 tcacattcaaaacagcattgaggggaatataataaaacagacaatggagaaggccttttg 120
Query: 1206 ggatggtatcatggaatctgttgagcaggatcagcccaactatgaccagattattcaact 1265
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 121 ggatggtatcatggaatctgttgagcaggatcagcccaactatgaccagattattcaact 180
Query: 1266 catgggagaggttagggatgaaatttgtgagatggctccgaaaagctggaaggaggatat 1325
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 catgggagaggttagggatgaaatttgtgagatggctccgaaaagctggaaggaggatat 240
Query: 1326 tgttgcagccattgacttggaaattctttctcaggtgctgagatctggtaacctggatgt 1385
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 tgttgcagccattgacttggaaattctttctcaggtgctgagatctggtaacctggatgt 300
Query: 1386 tgattgccttggaaaaattcttcggttttcactaggttgcttgcagaagctctcatctcc 1445
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgattgccttggaaaaattcttcggttttcactaggttgcttgcagaagctctcatctcc 360
Query: 1446 agccaatgaggagataatgaaggccacacacgagacattattctccgagttgagtgaaat 1505
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 agccaatgaggagataatgaaggccacacacgagacattattctccgagttgagtgaaat 420
Query: 1506 atgtcaatctagagatgagtcaaacaagtcttgtgttgtagccttggtgaagggtctgaa 1565
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 atgtcaatctagagatgagtcaaacaagtcttgtgttgtagccttggtgaagggtctgaa 480
Query: 1566 atttgtcctggaacagattcagattcttaagaaagagataagcaaagcacgcataagatt 1625
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 atttgtcctggaacagattcagattcttaagaaagagataagcaaagcacgcataagatt 540
Query: 1626 aatggagcctttgattaagggacctgctggtctggacta 1664
|||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatggagcctttgattaagggacctgctggtctggacta 579
>gnl|LJGI|TC68146 similar to UniRef100_A7PYI6 Cluster: Chromosome chr12 scaffold_38,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_38, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 1724
Score = 1076 bits (543), Expect = 0.0
Identities = 552/555 (99%)
Strand = Plus / Plus
Query: 1 atgctggggctcaatgaaaaatctgtcaagtcgatgccatttgatcagcttgctcttctg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 atgctggggctcaatgaaaaatctgtcaagtcgatgccatttgatcagcttgctcttctg 1229
Query: 61 attgaatcagcttctactcttcagaccgtgaaaactttacttgaccggttggagaaccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 attgaatcagcttctactcttcagaccgtgaaaactttacttgaccggttggagaaccgc 1289
Query: 121 ctcaaattgtcaacaacagttgctcctcgtaatcatatgtcaagtttgcataacattgat 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 1290 ctcaaattgtcaacaacagttgctcctcgtaatcatatgtcaagtttggataacattgat 1349
Query: 181 caccttctgaaacgggctgctacccccaacaaaaaggctactcccaggagttctttgaga 240
|||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 1350 caccttctgaaacgggttgctacccccaagaaaaaggctactcccaggagttctttgaga 1409
Query: 241 agcaggggggtgaggaaaatagattcagtcaagaggtcaaacaatagcttagctgggtta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1410 agcaggggggtgaggaaaatagattcagtcaagaggtcaaacaatagcttagctgggtta 1469
Query: 301 tcaagatatccagtgagaattgttctttgtgcttatatgatattgggtcatccagatgct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1470 tcaagatatccagtgagaattgttctttgtgcttatatgatattgggtcatccagatgct 1529
Query: 361 gttttcagtggaacgggagaacgtgagatttctttggccaagtctgctaaagaatttgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1530 gttttcagtggaacgggagaacgtgagatttctttggccaagtctgctaaagaatttgtc 1589
Query: 421 caaatgtttgagctgttaataaaggttattctagaggggccgatacagagttctgatgaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1590 caaatgtttgagctgttaataaaggttattctagaggggccgatacagagttctgatgaa 1649
Query: 481 gagtctctctcaaccgttatgaggcgttgtaccttcagatcacagctttccgcctttgat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1650 gagtctctctcaaccgttatgaggcgttgtaccttcagatcacagctttccgcctttgat 1709
Query: 541 aaagcatggtgctca 555
|||||||||||||||
Sbjct: 1710 aaagcatggtgctca 1724