Miyakogusa Predicted Gene
- Lj0g3v0086209.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0086209.1 Non Chatacterized Hit- tr|B9RJZ5|B9RJZ5_RICCO
ATP-binding cassette transporter, putative OS=Ricinus
,23.67,0.0000003,seg,NULL; ABC2_membrane,ABC-2 type transporter;
ATP-BINDING CASSETTE TRANSPORTER (PDR),NULL; ATP-BIN,CUFF.4570.1
(651 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC80265 weakly similar to UniRef100_A7P7L7 Cluster: Chr... 492 e-138
gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome... 262 2e-69
gnl|LJGI|TC67939 similar to UniRef100_A7P7K4 Cluster: Chromosome... 100 2e-20
gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome... 96 3e-19
gnl|LJGI|TC75444 similar to UniRef100_Q1M2R7 Cluster: PDR-like A... 82 5e-15
gnl|LJGI|GO024126 similar to UniRef100_A7P7K4 Cluster: Chromosom... 58 7e-08
>gnl|LJGI|TC80265 weakly similar to UniRef100_A7P7L7 Cluster: Chromosome chr9
scaffold_7, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome chr9 scaffold_7, whole genome
shotgun sequence - Vitis vinifera (Grape), partial (9%)
Length = 522
Score = 492 bits (248), Expect = e-138
Identities = 364/405 (89%)
Strand = Plus / Plus
Query: 247 ttcatgttcttcacattgtgctacttcacatactatggcatgatgactgttgctgttacc 306
||||||||||||||||||||||||||||| ||||| |||||||||||||| |||||||||
Sbjct: 1 ttcatgttcttcacattgtgctacttcacctactacggcatgatgactgtggctgttacc 60
Query: 307 ccaaatcaccatgttgctgcaattgtggcctctgcattttatggaatttggaacctcttt 366
|||||||||||||||||| ||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 61 ccaaatcaccatgttgcttcaattgtggccgctgcattttatgcaatttggaacctcttt 120
Query: 367 gcgggatttgtcatcccacgaacaaaatttcctgtgtggtggaggttgtactactgggca 426
| ||||||||| |||||||| ||| |||||||||||||||||| |||||||||||||
Sbjct: 121 tcaggatttgtcgtcccacgaccaaggattcctgtgtggtggaggtggtactactgggca 180
Query: 427 tgtccggtggcttggactctctatgggatggtagcgtcgcagtttggggatatagacaac 486
||||| |||||||||||| ||||||||||||| |||||||||||||| |||||||| ||
Sbjct: 181 tgtcctgtggcttggactatctatgggatggttgcgtcgcagtttggagatatagagcac 240
Query: 487 atgcttgaatcagatgatatttcagtccaagacttcatcaggagnnnnnnnggtatgaat 546
|| || |||||||||||| | |||||| | || ||||| ||||| ||||||||
Sbjct: 241 atactggaatcagatgatgtgtcagtcaaggagttcattaggagttattttggtatgaaa 300
Query: 547 catgacttcgtaggagtttgtgcagttgcggttgttgggtttgcagtgggctttgcattt 606
||||||||| |||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 301 catgacttcataggagtttgtgcagttgtggttgttgggtttgccgtgggctttgcattt 360
Query: 607 atctttgcagtctcaatcaaggtcttcaacttccaaagacgttag 651
||||||||||||||| |||||||||||||||||| ||||||||||
Sbjct: 361 atctttgcagtctcattcaaggtcttcaacttcccaagacgttag 405
>gnl|LJGI|TC79697 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (39%)
Length = 695
Score = 262 bits (132), Expect = 2e-69
Identities = 366/444 (82%)
Strand = Plus / Plus
Query: 9 tgctgttctcttccttggcatccagaattctgcctcagtacaacccgtggtagctgttga 68
|||||||||||||||||| | || || ||| | || ||||| || |||||| | |||||
Sbjct: 81 tgctgttctcttccttggagtgcaaaactcttcatctgtacagccagtggtatcagttga 140
Query: 69 aagaactgtcttttatagagaaagagcagctggaatgtattctgccttgccctatggact 128
|||||| ||||| |||||||||| ||| |||||||||||||||||||| ||||||| | |
Sbjct: 141 aagaacagtcttctatagagaaaaagctgctggaatgtattctgccttaccctatgcatt 200
Query: 129 tgcacaggttatcatagagctaccttatgtttttgcccaagctgtatcatacgtcgtcat 188
||| ||| || | | |||||||| ||| |||| |||||| || | || | |||||
Sbjct: 201 tgctcagattctagtggagctaccatatattttcttccaagccgtgacgtatggtgtcat 260
Query: 189 agtttattccatgatgggatttgaatggactgttgagaaattcttttggtatttgttctt 248
||||||| ||||||| |||||||| ||||||| ||||||||||||||||||||||||||
Sbjct: 261 agtttatgccatgatcggatttgattggactgcagagaaattcttttggtatttgttctt 320
Query: 249 catgttcttcacattgtgctacttcacatactatggcatgatgactgttgctgttacccc 308
||||| ||||||||||| |||||||| | |||||| |||||| ||| || || || ||
Sbjct: 321 catgtacttcacattgttgtacttcaccttctatgggatgatgggtgtggcagtgacacc 380
Query: 309 aaatcaccatgttgctgcaattgtggcctctgcattttatggaatttggaacctctttgc 368
|||||||||||||||| | |||||||| ||||||| |||| |||||||||||| ||| |
Sbjct: 381 aaatcaccatgttgcttccattgtggctgctgcattctatgcaatttggaacctgttttc 440
Query: 369 gggatttgtcatcccacgaacaaaatttcctgtgtggtggaggttgtactactgggcatg 428
|||||||| ||||| || ||| |||| ||||||||||| | |||||| ||||||||
Sbjct: 441 aggatttgttgtcccaagaccaagcattccagtgtggtggagatggtactattgggcatg 500
Query: 429 tccggtggcttggactctctatgg 452
||| ||||| ||||| |||||||
Sbjct: 501 tccagtggcctggaccatctatgg 524
>gnl|LJGI|TC67939 similar to UniRef100_A7P7K4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (8%)
Length = 631
Score = 99.6 bits (50), Expect = 2e-20
Identities = 122/146 (83%)
Strand = Plus / Plus
Query: 307 ccaaatcaccatgttgctgcaattgtggcctctgcattttatggaatttggaacctcttt 366
|||||||||||||||||| | |||||||| ||||||| |||| |||||||||||| |||
Sbjct: 26 ccaaatcaccatgttgcttccattgtggctgctgcattctatgcaatttggaacctgttt 85
Query: 367 gcgggatttgtcatcccacgaacaaaatttcctgtgtggtggaggttgtactactgggca 426
| |||||||| ||||| || ||| |||| ||||||||||| | |||||| ||||||
Sbjct: 86 tcaggatttgttgtcccaagaccaagcattccagtgtggtggagatggtactattgggca 145
Query: 427 tgtccggtggcttggactctctatgg 452
||||| ||||| ||||| |||||||
Sbjct: 146 tgtccagtggcctggaccatctatgg 171
>gnl|LJGI|TC81588 similar to UniRef100_A7R926 Cluster: Chromosome undetermined
scaffold_3238, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_3238,
whole genome shotgun sequence - Vitis vinifera (Grape),
partial (51%)
Length = 715
Score = 95.6 bits (48), Expect = 3e-19
Identities = 99/116 (85%)
Strand = Plus / Plus
Query: 9 tgctgttctcttccttggcatccagaattctgcctcagtacaacccgtggtagctgttga 68
|||||||||||||||||| | || || ||| | || ||||| || |||||| | |||||
Sbjct: 589 tgctgttctcttccttggagtgcaaaactcttcatctgtacagccagtggtatcagttga 648
Query: 69 aagaactgtcttttatagagaaagagcagctggaatgtattctgccttgccctatg 124
|||||| ||||| |||||||||| ||| |||||||||||||||||||| |||||||
Sbjct: 649 aagaacagtcttctatagagaaaaagctgctggaatgtattctgccttaccctatg 704
>gnl|LJGI|TC75444 similar to UniRef100_Q1M2R7 Cluster: PDR-like ABC-transporter; n=1;
Glycine max|Rep: PDR-like ABC-transporter - Glycine max
(Soybean), partial (22%)
Length = 1248
Score = 81.8 bits (41), Expect = 5e-15
Identities = 203/257 (78%)
Strand = Plus / Plus
Query: 55 gtggtagctgttgaaagaactgtcttttatagagaaagagcagctggaatgtattctgcc 114
||||| |||||||| ||||| |||||||||||||||||||| |||||||||||||| ||
Sbjct: 367 gtggttgctgttgagagaacagtcttttatagagaaagagctgctggaatgtattcagct 426
Query: 115 ttgccctatggacttgcacaggttatcatagagctaccttatgtttttgcccaagctgta 174
||| | |||| |||| |||||| | || ||||| || |||||| || |||||| ||
Sbjct: 427 ttggcatatgcttttgctcaggttctaattgagctcccatatgttcttttacaagctata 486
Query: 175 tcatacgtcgtcatagtttattccatgatgggatttgaatggactgttgagaaattcttt 234
|| | | ||||||||| | ||||| || | |||||||||||| | ||||| ||
Sbjct: 487 gtgtatggctgtatagtttatgcaatgattggttatgaatggactgtggctaaatttttc 546
Query: 235 tggtatttgttcttcatgttcttcacattgtgctacttcacatactatggcatgatgact 294
||||| | |||||||||| |||||||| |||||||| ||||||||||||||| |
Sbjct: 547 tggtacctcttcttcatgtatttcacattcctgtacttcacctactatggcatgatgtca 606
Query: 295 gttgctgttaccccaaa 311
|| ||||| ||||||||
Sbjct: 607 gtggctgtgaccccaaa 623
>gnl|LJGI|GO024126 similar to UniRef100_A7P7K4 Cluster: Chromosome chr9 scaffold_7,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr9 scaffold_7, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (16%)
Length = 723
Score = 58.0 bits (29), Expect = 7e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 59 tagctgttgaaagaactgtcttttatagagaaagagcagctggaatgtattctgccttgc 118
|||| ||||| ||||| ||||| || ||||||||||| |||||||||||||| || ||||
Sbjct: 203 tagcagttgagagaacagtcttctacagagaaagagctgctggaatgtattcagctttgc 262
Query: 119 c 119
|
Sbjct: 263 c 263