Miyakogusa Predicted Gene
- Lj0g3v0084459.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0084459.1 tr|G7J833|G7J833_MEDTR Transmembrane 9
superfamily protein member OS=Medicago truncatula
GN=MTR_3g08,91.81,0,TRANSMEMBRANE 9 SUPERFAMILY PROTEIN,NULL;
TRANSMEMBRANE 9 SUPERFAMILY PROTEIN,Nonaspanin (TM9SF); EM,CUFF.4457.1
(1981 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|GO023858 similar to UniRef100_A7Q2V0 Cluster: Chromosom... 1493 0.0
gnl|LJGI|TC73354 homologue to UniRef100_A7Q2V0 Cluster: Chromoso... 1455 0.0
gnl|LJGI|GO024943 homologue to UniRef100_A7Q2V0 Cluster: Chromos... 662 0.0
gnl|LJGI|DN652276 similar to UniRef100_A7Q2V0 Cluster: Chromosom... 214 2e-54
gnl|LJGI|TC80054 similar to UniRef100_Q9FYQ8 Cluster: Endosomal ... 88 2e-16
gnl|LJGI|TC60944 homologue to UniRef100_A7QS13 Cluster: Chromoso... 56 9e-07
>gnl|LJGI|GO023858 similar to UniRef100_A7Q2V0 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (38%)
Length = 761
Score = 1493 bits (753), Expect = 0.0
Identities = 760/761 (99%), Gaps = 1/761 (0%)
Strand = Plus / Plus
Query: 947 gaactgtaagaagggacttgacaaggtatgaggaattggacaaagaggcacaagctcaga 1006
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gaactgtaagaagggacttgacaaggtatgaggaattggacaaagaggcacaagctcaga 61
Query: 1007 tgaatgaggagctctctggatggaaactagttgtgggtgatgtgtttagggagcctgatt 1066
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgaatgaggagctctctggatggaaactagttgtgggtgatgtgtttagggagcctgatt 121
Query: 1067 gctcaaagcttctctgtgtgatggttggagatggggttcagattcttggaatggctggtg 1126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gctcaaagcttctctgtgtgatggttggagatggggttcagattcttggaatggctggtg 181
Query: 1127 ttactattgttttctcagcacttggtttcatgtcgccagcatcccgaggtatgctactaa 1186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 ttactattgttttctcagcacttggtttcatgtcgccagcatcccgaggtatgctactaa 241
Query: 1187 cagggatgatcattttatatcttatcctgggaatttcggctggctatgtcagtgtacgtc 1246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 cagggatgatcattttatatcttatcctgggaatttcggctggctatgtcagtgtacgtc 301
Query: 1247 tctggaggaccattaagggaacatcagaagggtggagatcgatttcctggtctgctgcat 1306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 tctggaggaccattaagggaacatcagaagggtggagatcgatttcctggtctgctgcat 361
Query: 1307 gttttttccctggaattgctttcattatcctcacaatactgaattttattctatggagca 1366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gttttttccctggaattgctttcattatcctcacaatactgaattttattctatggagca 421
Query: 1367 gcaacagtactggtgctatacccatttcgttgtatttcgaactgttcttcctctggtttt 1426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 gcaacagtactggtgctatacccatttcgttgtatttcgaactgttcttcctctggtttt 481
Query: 1427 gcatctcagtacctcttaccctcattggaggatttatggggacaaaagctgagcccattg 1486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 gcatctcagtacctcttaccctcattggaggatttatggggacaaaagctgagcccattg 541
Query: 1487 aatttcctgtgcggactaatcagattccaagggaaattcctgcacggaaatatccatcat 1546
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 aatttcctgtgcggactaatcagattccaagggaaattcctgcacggaaatatccatcat 601
Query: 1547 ggcttcttgttcttggtgctggaactcttccatttggaaccctcttcattgaacttttct 1606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 ggcttcttgttcttggtgctggaactcttccatttggaaccctcttcattgaacttttct 661
Query: 1607 ttatcctttccagtatctggcttgggaggttctattatgtgtttggtttcctgttggtgg 1666
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 662 ttatcctttccagtatctggcttggga-gttctattatgtgtttggtttcctgttggtgg 720
Query: 1667 ttcttctattgctggttatcgtctgtgctgaagtttcagtg 1707
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 721 ttcttctattgctggttatcgtctgtgctgaagtttcagtg 761
>gnl|LJGI|TC73354 homologue to UniRef100_A7Q2V0 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 1060
Score = 1455 bits (734), Expect = 0.0
Identities = 734/734 (100%)
Strand = Plus / Plus
Query: 1248 ctggaggaccattaagggaacatcagaagggtggagatcgatttcctggtctgctgcatg 1307
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 ctggaggaccattaagggaacatcagaagggtggagatcgatttcctggtctgctgcatg 61
Query: 1308 ttttttccctggaattgctttcattatcctcacaatactgaattttattctatggagcag 1367
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttttttccctggaattgctttcattatcctcacaatactgaattttattctatggagcag 121
Query: 1368 caacagtactggtgctatacccatttcgttgtatttcgaactgttcttcctctggttttg 1427
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caacagtactggtgctatacccatttcgttgtatttcgaactgttcttcctctggttttg 181
Query: 1428 catctcagtacctcttaccctcattggaggatttatggggacaaaagctgagcccattga 1487
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 catctcagtacctcttaccctcattggaggatttatggggacaaaagctgagcccattga 241
Query: 1488 atttcctgtgcggactaatcagattccaagggaaattcctgcacggaaatatccatcatg 1547
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 atttcctgtgcggactaatcagattccaagggaaattcctgcacggaaatatccatcatg 301
Query: 1548 gcttcttgttcttggtgctggaactcttccatttggaaccctcttcattgaacttttctt 1607
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gcttcttgttcttggtgctggaactcttccatttggaaccctcttcattgaacttttctt 361
Query: 1608 tatcctttccagtatctggcttgggaggttctattatgtgtttggtttcctgttggtggt 1667
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 tatcctttccagtatctggcttgggaggttctattatgtgtttggtttcctgttggtggt 421
Query: 1668 tcttctattgctggttatcgtctgtgctgaagtttcagtggttctcacatatatgcatct 1727
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 422 tcttctattgctggttatcgtctgtgctgaagtttcagtggttctcacatatatgcatct 481
Query: 1728 ctgtgtggaagattggcggtggtggtggaaggcgttctttgcttcaggttctgttgcact 1787
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctgtgtggaagattggcggtggtggtggaaggcgttctttgcttcaggttctgttgcact 541
Query: 1788 atatgttttcttgtactccgtcaactacttggtttttgacctgcagagtttgagtggacc 1847
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 542 atatgttttcttgtactccgtcaactacttggtttttgacctgcagagtttgagtggacc 601
Query: 1848 tgtctccgctgtcctttaccttggctattcactgctaatggcagttgctatcatgttgtc 1907
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 tgtctccgctgtcctttaccttggctattcactgctaatggcagttgctatcatgttgtc 661
Query: 1908 gaccgggaccattggcttcctcatgtcattctactttgtgcactacttgttctcttctgt 1967
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 gaccgggaccattggcttcctcatgtcattctactttgtgcactacttgttctcttctgt 721
Query: 1968 gaagatagattgag 1981
||||||||||||||
Sbjct: 722 gaagatagattgag 735
>gnl|LJGI|GO024943 homologue to UniRef100_A7Q2V0 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (27%)
Length = 753
Score = 662 bits (334), Expect = 0.0
Identities = 496/550 (90%)
Strand = Plus / Plus
Query: 1432 tcagtacctcttaccctcattggaggatttatggggacaaaagctgagcccattgaattt 1491
||||| || |||||||||||||||||||||||||||||||||||| | |||||||||
Sbjct: 3 tcagtgccacttaccctcattggaggatttatggggacaaaagctccacaaattgaattt 62
Query: 1492 cctgtgcggactaatcagattccaagggaaattcctgcacggaaatatccatcatggctt 1551
|||||||| |||||||||||||||||||||||||| |||| ||||| ||||||||||||
Sbjct: 63 cctgtgcgaactaatcagattccaagggaaattccaacacgtaaatacccatcatggctt 122
Query: 1552 cttgttcttggtgctggaactcttccatttggaaccctcttcattgaacttttctttatc 1611
|||||||||||||||||||||||||| ||||||||||| |||||||| ||||||||||||
Sbjct: 123 cttgttcttggtgctggaactcttccgtttggaacccttttcattgagcttttctttatc 182
Query: 1612 ctttccagtatctggcttgggaggttctattatgtgtttggtttcctgttggtggttctt 1671
||||||||||||||||||||||||||||||||||| ||||| ||| ||| | | ||||||
Sbjct: 183 ctttccagtatctggcttgggaggttctattatgtctttggcttcttgtcgattgttctt 242
Query: 1672 ctattgctggttatcgtctgtgctgaagtttcagtggttctcacatatatgcatctctgt 1731
||||| ||| |||| || ||||||||||| |||||||| ||||||||||||||||| |||
Sbjct: 243 ctattactgattattgtttgtgctgaagtgtcagtggtcctcacatatatgcatctttgt 302
Query: 1732 gtggaagattggcggtggtggtggaaggcgttctttgcttcaggttctgttgcactatat 1791
||||||||||||||||||||||||||||| |||||||| ||||| || ||||| || |||
Sbjct: 303 gtggaagattggcggtggtggtggaaggcattctttgcatcaggctccgttgctctttat 362
Query: 1792 gttttcttgtactccgtcaactacttggtttttgacctgcagagtttgagtggacctgtc 1851
|| ||||| |||||| | |||||||||||||| |||||||||||||||||||||||| ||
Sbjct: 363 gtcttcttatactccattaactacttggttttcgacctgcagagtttgagtggacctatc 422
Query: 1852 tccgctgtcctttaccttggctattcactgctaatggcagttgctatcatgttgtcgacc 1911
|| ||| | ||||| ||||||||||| ||||| |||||| |||| ||||||||||| |||
Sbjct: 423 tctgctatactttatcttggctattcgctgctcatggcaattgcaatcatgttgtcaacc 482
Query: 1912 gggaccattggcttcctcatgtcattctactttgtgcactacttgttctcttctgtgaag 1971
||||||||||||||||| |||||||||||||||||||| || |||||||| || ||||||
Sbjct: 483 gggaccattggcttccttatgtcattctactttgtgcattatttgttctcatcagtgaag 542
Query: 1972 atagattgag 1981
||||||||||
Sbjct: 543 atagattgag 552
>gnl|LJGI|DN652276 similar to UniRef100_A7Q2V0 Cluster: Chromosome chr12 scaffold_47,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr12 scaffold_47, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (5%)
Length = 112
Score = 214 bits (108), Expect = 2e-54
Identities = 108/108 (100%)
Strand = Plus / Plus
Query: 699 gcacaaaacatatgataatatctcttctgtaagctgccctggtgagcttgacaagtatca 758
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 gcacaaaacatatgataatatctcttctgtaagctgccctggtgagcttgacaagtatca 64
Query: 759 agtaattagagagcaagaaaggatatcatttacttacgaggttgaatt 806
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 agtaattagagagcaagaaaggatatcatttacttacgaggttgaatt 112
>gnl|LJGI|TC80054 similar to UniRef100_Q9FYQ8 Cluster: Endosomal protein-like; n=1;
Arabidopsis thaliana|Rep: Endosomal protein-like -
Arabidopsis thaliana (Mouse-ear cress), partial (26%)
Length = 504
Score = 87.7 bits (44), Expect = 2e-16
Identities = 188/236 (79%)
Strand = Plus / Plus
Query: 814 agtgatataaaatggccatcacgttgggatgcatatttgaagatggagggttctcgtgtc 873
|||||||| || |||||||| | |||||||| || |||||||||||||| | |||
Sbjct: 160 agtgatatcaagtggccatctagatgggatgcctacttgaagatggagggagccaaggtc 219
Query: 874 cattggttctcaatcctaaattcacttatggttatcttattcctagctggtattgttttt 933
||||||||||| ||||| ||||| |||||||| ||| || || |||||||||||| ||
Sbjct: 220 cattggttctccatcctcaattcgcttatggtgatcacttttcttgctggtattgttctt 279
Query: 934 gtcattttcttaagaactgtaagaagggacttgacaaggtatgaggaattggacaaagag 993
|| || ||| | |||||||| || ||||| |||| | |||||||| | || || |||
Sbjct: 280 gttatcttcctgagaactgttaggagggatctgacccgttatgaggagcttgataaggag 339
Query: 994 gcacaagctcagatgaatgaggagctctctggatggaaactagttgtgggtgatgt 1049
|| ||||| ||||||||||| ||| | ||||| ||||| || |||||||| |||||
Sbjct: 340 gctcaagcacagatgaatgaagagttatctggttggaagcttgttgtgggagatgt 395
>gnl|LJGI|TC60944 homologue to UniRef100_A7QS13 Cluster: Chromosome undetermined
scaffold_155, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_155, whole
genome shotgun sequence - Vitis vinifera (Grape), partial
(27%)
Length = 785
Score = 56.0 bits (28), Expect = 9e-07
Identities = 49/56 (87%)
Strand = Plus / Plus
Query: 1543 tcatggcttcttgttcttggtgctggaactcttccatttggaaccctcttcattga 1598
||||||||| | ||||| |||||||| || ||||||||||| ||||| ||||||||
Sbjct: 100 tcatggcttttggttctaggtgctggcacccttccatttggtacccttttcattga 155