Miyakogusa Predicted Gene
- Lj0g3v0083289.2
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0083289.2 tr|I1JQN7|I1JQN7_SOYBN Pectinesterase OS=Glycine
max PE=3 SV=1,80.43,0,SUBFAMILY NOT NAMED,NULL; FAMILY NOT NAMED,NULL;
Pectin lyase-like,Pectin lyase fold/virulence facto,CUFF.4370.2
(1683 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC60462 weakly similar to UniRef100_A0ZNK1 Cluster: Pec... 1356 0.0
gnl|LJGI|FS349507 similar to UniRef100_A7Q0F7 Cluster: Chromosom... 1114 0.0
gnl|LJGI|GO016380 similar to UniRef100_A7Q0F7 Cluster: Chromosom... 718 0.0
gnl|LJGI|TC70575 similar to UniRef100_A7Q0F7 Cluster: Chromosome... 92 1e-17
gnl|LJGI|TC63520 similar to UniRef100_A7QAI4 Cluster: Chromosome... 88 2e-16
gnl|LJGI|TC82573 homologue to UniRef100_Q708X4 Cluster: Pectin m... 58 2e-07
gnl|LJGI|TC61921 similar to UniRef100_Q708X4 Cluster: Pectin met... 58 2e-07
>gnl|LJGI|TC60462 weakly similar to UniRef100_A0ZNK1 Cluster: Pectin methylesterase
3; n=1; Pyrus communis|Rep: Pectin methylesterase 3 -
Pyrus communis (Pear), partial (29%)
Length = 774
Score = 1356 bits (684), Expect = 0.0
Identities = 687/688 (99%)
Strand = Plus / Plus
Query: 1 atggctttcataaactttgcccttctcacgctctgcatttcgcttattctttccatcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 atggctttcataaactttgcccttctcacgctctgcatttcgcttattctttccatcttg 128
Query: 61 gcatcatcatccatagcttccaacccacctatagttcccccagaaactatttgcagatcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 gcatcatcatccatagcttccaacccacctatagttcccccagaaactatttgcagatcc 188
Query: 121 actacagatccttccttctgtaaaacagtgcttgcaaacaaaaacggcaccgtctttgac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 actacagatccttccttctgtaaaacagtgcttgcaaacaaaaacggcaccgtctttgac 248
Query: 181 tatggccgcattgctgtcacaaagtccttatcccaatcccgcaagttcttaaacttagtg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 tatggccgcattgctgtcacaaagtccttatcccaatcccgcaagttcttaaacttagtg 308
Query: 241 gattcacaccttcaagataaatcatctttgtcccaacccacaatttcttctcttgaagat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gattcacaccttcaagataaatcatctttgtcccaacccacaatttcttctcttgaagat 368
Query: 301 tgtctttttcttgctgaactaaactttgaatacttatcaaacactattaacaccgctaat 360
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 tgtccttttcttgctgaactaaactttgaatacttatcaaacactattaacaccgctaat 428
Query: 361 aaatctagtgatgttcttccctcttcccaagcagaagaaatacacacgttactaagtgct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 aaatctagtgatgttcttccctcttcccaagcagaagaaatacacacgttactaagtgct 488
Query: 421 gttctcacaaaccaacaaacttgcttagatggcctagagaccacggcttctgatcagaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 gttctcacaaaccaacaaacttgcttagatggcctagagaccacggcttctgatcagaga 548
Query: 481 gtgaagaattatttatcatcctcgctttctaatgatacaaagcttcatggtgtctcactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 549 gtgaagaattatttatcatcctcgctttctaatgatacaaagcttcatggtgtctcactt 608
Query: 541 gccctctttgtgaagggctgggtgcctgagaagaaaatacaaacatcatggcaatttaat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 609 gccctctttgtgaagggctgggtgcctgagaagaaaatacaaacatcatggcaatttaat 668
Query: 601 gggagacacttgggttttcggaacggtcgcttaccattgaagatgtcaaatcgagcacgt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 669 gggagacacttgggttttcggaacggtcgcttaccattgaagatgtcaaatcgagcacgt 728
Query: 661 gccatttatgattctgcggtctctagag 688
||||||||||||||||||||||||||||
Sbjct: 729 gccatttatgattctgcggtctctagag 756
>gnl|LJGI|FS349507 similar to UniRef100_A7Q0F7 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 684
Score = 1114 bits (562), Expect = 0.0
Identities = 562/562 (100%)
Strand = Plus / Minus
Query: 1122 cagctttgaagggtatcaagacactctgtacacacactctttgaggcaattttaccgtga 1181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 cagctttgaagggtatcaagacactctgtacacacactctttgaggcaattttaccgtga 625
Query: 1182 atgtgacatctatggcacagttgatttcatatttggaaatgccgctgttgttttccaaac 1241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 atgtgacatctatggcacagttgatttcatatttggaaatgccgctgttgttttccaaac 565
Query: 1242 ttgcaacatctatccacgcctccccatgagtggacaattcaatgccattactgctcaagg 1301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 ttgcaacatctatccacgcctccccatgagtggacaattcaatgccattactgctcaagg 505
Query: 1302 tcgaactgatccaaatcaaaacacgggaagttccatacataatgccactattaaagctac 1361
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 tcgaactgatccaaatcaaaacacgggaagttccatacataatgccactattaaagctac 445
Query: 1362 tgaagatttggctccgaaggttagtacagtgaaaacataccttgggaggccatggaaaga 1421
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tgaagatttggctccgaaggttagtacagtgaaaacataccttgggaggccatggaaaga 385
Query: 1422 gtactcaaggactgtgtatttgcaatcattcatggataacttgatagatcccactggttg 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gtactcaaggactgtgtatttgcaatcattcatggataacttgatagatcccactggttg 325
Query: 1482 gcatgaatggagcggagattttgcattaagtaccttgtactatgcagagtataataacac 1541
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcatgaatggagcggagattttgcattaagtaccttgtactatgcagagtataataacac 265
Query: 1542 gggacctggttcaaacactgtgaatagagtgaattggctaggctatcatgttattaatgc 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gggacctggttcaaacactgtgaatagagtgaattggctaggctatcatgttattaatgc 205
Query: 1602 tactgatgcagctaattttactgtgtctaacttcttagatggggataattggctgcctca 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 tactgatgcagctaattttactgtgtctaacttcttagatggggataattggctgcctca 145
Query: 1662 gactggtgtcccatacttgagt 1683
||||||||||||||||||||||
Sbjct: 144 gactggtgtcccatacttgagt 123
>gnl|LJGI|GO016380 similar to UniRef100_A7Q0F7 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (13%)
Length = 362
Score = 718 bits (362), Expect = 0.0
Identities = 362/362 (100%)
Strand = Plus / Minus
Query: 443 gcttagatggcctagagaccacggcttctgatcagagagtgaagaattatttatcatcct 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 gcttagatggcctagagaccacggcttctgatcagagagtgaagaattatttatcatcct 303
Query: 503 cgctttctaatgatacaaagcttcatggtgtctcacttgccctctttgtgaagggctggg 562
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 cgctttctaatgatacaaagcttcatggtgtctcacttgccctctttgtgaagggctggg 243
Query: 563 tgcctgagaagaaaatacaaacatcatggcaatttaatgggagacacttgggttttcgga 622
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 tgcctgagaagaaaatacaaacatcatggcaatttaatgggagacacttgggttttcgga 183
Query: 623 acggtcgcttaccattgaagatgtcaaatcgagcacgtgccatttatgattctgcggtct 682
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 acggtcgcttaccattgaagatgtcaaatcgagcacgtgccatttatgattctgcggtct 123
Query: 683 ctagaggccgcgggagaaaactgcttcaagcgtcgggtgacaacctaagcgtcacagtga 742
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 ctagaggccgcgggagaaaactgcttcaagcgtcgggtgacaacctaagcgtcacagtga 63
Query: 743 gtgacatcgtggttgttagtcaggatggaagtggaaatttcaccgctatcaacgatgcta 802
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 62 gtgacatcgtggttgttagtcaggatggaagtggaaatttcaccgctatcaacgatgcta 3
Query: 803 ta 804
||
Sbjct: 2 ta 1
>gnl|LJGI|TC70575 similar to UniRef100_A7Q0F7 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 845
Score = 91.7 bits (46), Expect = 1e-17
Identities = 130/158 (82%)
Strand = Plus / Plus
Query: 1180 gaatgtgacatctatggcacagttgatttcatatttggaaatgccgctgttgttttccaa 1239
||||| |||||||| ||||| || ||||||||||||||||||||| ||||| ||||||
Sbjct: 166 gaatgcgacatctacggcacggtggatttcatatttggaaatgccaaggttgtgttccaa 225
Query: 1240 acttgcaacatctatccacgcctccccatgagtggacaattcaatgccattactgctcaa 1299
| |||||||| ||||| || ||||| |||| || |||||||| ||||| ||||| |||
Sbjct: 226 aactgcaacatgtatcctcgtctcccgatgaaggggcaattcaacgccataactgcacaa 285
Query: 1300 ggtcgaactgatccaaatcaaaacacgggaagttccat 1337
|| ||||| || || || ||| |||| |||| ||||||
Sbjct: 286 ggccgaacagaccctaaccaagacacaggaacttccat 323
>gnl|LJGI|TC63520 similar to UniRef100_A7QAI4 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 999
Score = 87.7 bits (44), Expect = 2e-16
Identities = 125/152 (82%)
Strand = Plus / Plus
Query: 1102 ctgtccaccttctacagctgcagctttgaagggtatcaagacactctgtacacacactct 1161
|||||||| |||||| | |||||||| ||||||||||||||||| || || ||||||
Sbjct: 294 ctgtccactttctaccgttgcagcttcgaagggtatcaagacacactctatgtccactct 353
Query: 1162 ttgaggcaattttaccgtgaatgtgacatctatggcacagttgatttcatatttggaaat 1221
|||||||||| ||| | |||||||| ||||||||||| || || ||||| ||||| |||
Sbjct: 354 ctgaggcaattctacagagaatgtgatatctatggcactgtggacttcatttttggcaat 413
Query: 1222 gccgctgttgttttccaaacttgcaacatcta 1253
|| || || || ||||| | |||||||||||
Sbjct: 414 gctgcagtggtcttccagaactgcaacatcta 445
>gnl|LJGI|TC82573 homologue to UniRef100_Q708X4 Cluster: Pectin methylesterase; n=1;
Cicer arietinum|Rep: Pectin methylesterase - Cicer
arietinum (Chickpea) (Garbanzo), partial (23%)
Length = 921
Score = 58.0 bits (29), Expect = 2e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1402 cttgggaggccatggaaagagtactcaaggactgtgt 1438
||||||||||||||||| ||||| |||||||||||||
Sbjct: 314 cttgggaggccatggaaggagtattcaaggactgtgt 350
>gnl|LJGI|TC61921 similar to UniRef100_Q708X4 Cluster: Pectin methylesterase; n=1;
Cicer arietinum|Rep: Pectin methylesterase - Cicer
arietinum (Chickpea) (Garbanzo), partial (89%)
Length = 2214
Score = 58.0 bits (29), Expect = 2e-07
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1402 cttgggaggccatggaaagagtactcaaggactgtgt 1438
||||||||||||||||| ||||| |||||||||||||
Sbjct: 1557 cttgggaggccatggaaggagtattcaaggactgtgt 1593