Miyakogusa Predicted Gene
- Lj0g3v0075379.3
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0075379.3 tr|F4WZ10|F4WZ10_ACREC Extended synaptotagmin-2
OS=Acromyrmex echinatior GN=G5I_11224 PE=4 SV=1,29.47,4e-19,seg,NULL;
C2 DOMAIN-CONTAINING PROTEIN,NULL; EXTENDED
SYNAPTOTAGMIN-RELATED,NULL,CUFF.4146.3
(582 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS333893 similar to UniRef100_A7NSS8 Cluster: Chromosom... 1061 0.0
gnl|LJGI|TC65301 similar to UniRef100_A7NSS8 Cluster: Chromosome... 196 1e-49
gnl|LJGI|FS320530 similar to UniRef100_A7NSS8 Cluster: Chromosom... 115 3e-25
gnl|LJGI|DC593205 similar to UniRef100_A7NSS8 Cluster: Chromosom... 72 4e-12
>gnl|LJGI|FS333893 similar to UniRef100_A7NSS8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 734
Score = 1061 bits (535), Expect = 0.0
Identities = 541/543 (99%)
Strand = Plus / Plus
Query: 1 atgggtttcttcagcaccattttagggtttttcggattcggagttggaatctccattggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 atgggtttcttcagcaccattttagggtttttcggattcggagttggaatctccattggt 251
Query: 61 cttatcgctggctattttctcttcatctacttccaacccaccgatgttgaggatccgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cttatcgctggctattttctcttcatctacttccaacccaccgatgttgaggatccgaaa 311
Query: 121 atcaagccactggcggagcaagacgcggagacgctgctacgaatgctccctgagattccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 atcaagccactggcggagcaagacgcggagacgctgctacgaatgctccctgagattccg 371
Query: 181 ctttggattaagaatccagattttgatcgacttgactggctgaacaagtttttggaatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 372 ctttggattaagaatccagattttgatcgacttgactggctgaacaagtttgtggaatat 431
Query: 241 atgtggccttatcttgacaaggcaatttgtaagactgccaagaacattgcaaaacccata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 atgtggccttatcttgacaaggcaatttgtaagactgccaagaacattgcaaaacccata 491
Query: 301 attgctgagcagattcctaaatataaaattgattctgttgagtttgagacgctcactttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 attgctgagcagattcctaaatataaaattgattctgttgagtttgagacgctcactttg 551
Query: 361 gggtccctgccgccaacttttcaaggaatgaaaatttatatgactgatgagaaggagcta 420
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 ggatccctgccgccaacttttcaaggaatgaaaatttatatgactgatgagaaggagcta 611
Query: 421 attatggagccttctgtaaaatgggcgggaaatcctaatatcactgttgctgttaaggca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 attatggagccttctgtaaaatgggcgggaaatcctaatatcactgttgctgttaaggca 671
Query: 481 tttgggttgaaagcaaccgttcagatcatggatttgcaagttttccttttgccccgcatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 tttgggttgaaagcaaccgttcagatcatggatttgcaagttttccttttgccccgcatt 731
Query: 541 act 543
|||
Sbjct: 732 act 734
>gnl|LJGI|TC65301 similar to UniRef100_A7NSS8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (67%)
Length = 1425
Score = 196 bits (99), Expect = 1e-49
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 484 gggttgaaagcaaccgttcagatcatggatttgcaagttttccttttgccccgcattact 543
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 gggttgaaagcaaccgttcagatcatggatttgcaagttttccttttgccccgcattact 61
Query: 544 ttgaagcctttggttcctagctttccttgctttgccaac 582
|||||||||||||||||||||||||||||||||||||||
Sbjct: 62 ttgaagcctttggttcctagctttccttgctttgccaac 100
>gnl|LJGI|FS320530 similar to UniRef100_A7NSS8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (34%)
Length = 801
Score = 115 bits (58), Expect = 3e-25
Identities = 199/246 (80%)
Strand = Plus / Plus
Query: 183 ttggattaagaatccagattttgatcgacttgactggctgaacaagtttttggaatatat 242
||||||||| |||||||| | |||||| ||||| ||||| || || ||| | || ||||
Sbjct: 438 ttggattaaaaatccagactatgatcgccttgattggcttaataaatttattgagcatat 497
Query: 243 gtggccttatcttgacaaggcaatttgtaagactgccaagaacattgcaaaacccataat 302
|||||||||||| ||||||||||||| |||||||| | | | || ||||| ||||| ||
Sbjct: 498 gtggccttatctaaacaaggcaatttgcaagactgcaagggagatagcaaagcccatcat 557
Query: 303 tgctgagcagattcctaaatataaaattgattctgttgagtttgagacgctcactttggg 362
||||| || ||||| || || ||||||||||| ||||| ||||| |||| |||||
Sbjct: 558 agctgaacaaattccaaagtacaaaattgattcagttgaatttgaagaactcaacttggg 617
Query: 363 gtccctgccgccaacttttcaaggaatgaaaatttatatgactgatgagaaggagctaat 422
|| || || ||||||||||||||||||||| | |||| |||||||| |||||| | ||
Sbjct: 618 ttctcttccaccaacttttcaaggaatgaaagtctatagtactgatgaaaaggagttgat 677
Query: 423 tatgga 428
||||||
Sbjct: 678 tatgga 683
>gnl|LJGI|DC593205 similar to UniRef100_A7NSS8 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (30%)
Length = 587
Score = 71.9 bits (36), Expect = 4e-12
Identities = 135/168 (80%)
Strand = Plus / Plus
Query: 260 aggcaatttgtaagactgccaagaacattgcaaaacccataattgctgagcagattccta 319
|||||||||| |||||||| | | | || ||||| ||||| || ||||| || ||||| |
Sbjct: 104 aggcaatttgcaagactgcaagggagatagcaaagcccatcatagctgaacaaattccaa 163
Query: 320 aatataaaattgattctgttgagtttgagacgctcactttggggtccctgccgccaactt 379
| || ||||||||||| ||||| ||||| |||| ||||| || || || |||||||
Sbjct: 164 agtacaaaattgattcagttgaatttgaagaactcaacttgggttctcttccaccaactt 223
Query: 380 ttcaaggaatgaaaatttatatgactgatgagaaggagctaattatgg 427
|||||||||||||| | |||| |||||||| |||||| | |||||||
Sbjct: 224 ttcaaggaatgaaagtctatagtactgatgaaaaggagttgattatgg 271