Miyakogusa Predicted Gene
- Lj0g3v0073769.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0073769.1 gi|1370161|emb|X97853.1|.path1.1
(411 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|TC67279 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus jap... 799 0.0
gnl|LJGI|TC57519 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus jap... 799 0.0
gnl|LJGI|AU089325 UniRef100_Q40204 Cluster: RAB1D; n=1; Lotus ja... 86 2e-16
gnl|LJGI|TC70276 UniRef100_Q40204 Cluster: RAB1D; n=1; Lotus jap... 86 2e-16
gnl|LJGI|TC61894 UniRef100_Q40203 Cluster: RAB1C; n=1; Lotus jap... 86 2e-16
gnl|LJGI|TC58412 UniRef100_Q40203 Cluster: RAB1C; n=1; Lotus jap... 86 2e-16
gnl|LJGI|TC67644 UniRef100_Q40206 Cluster: RAB1X; n=1; Lotus jap... 56 2e-07
gnl|LJGI|TC58877 homologue to UniRef100_A7NSN5 Cluster: Chromoso... 52 3e-06
>gnl|LJGI|TC67279 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus japonicus|Rep: RAB1A -
Lotus japonicus, complete
Length = 956
Score = 799 bits (403), Expect = 0.0
Identities = 409/411 (99%)
Strand = Plus / Plus
Query: 1 atgagcaacgaatacgattacctgttcaagcttctactgatcggagactcctcagttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 51 atgagcaacgaatacgattacctgttcaagcttctactgatcggagactcctcagttgga 110
Query: 61 aaatcttgcttgcttctccgatttgctgatgactcctatgtcgacagctacattagcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 111 aaatcttgcttgcttctccgatttgctgatgactcctatgtcgacagctacattagcacc 170
Query: 121 attggcgttgatttcaaaatcagaactgtcgagctccaaggcaaaaccatcaagctgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 171 attggcgttgatttcaaaatcagaactgtcgagctccaaggcaaaaccatcaagctgcag 230
Query: 181 atttgggatactgctggacaggagcgcttcaggactataacaagcagttactatagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 231 atttgggatactgctggacaggagcgcttcaggactataacaagcagttactatagagga 290
Query: 241 gcacatggaataattattgtctatgatgtcactgagatggaaagcttcaacaatgtcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 291 gcacatggaataattattgtctatgatgtcactgagatggaaagcttcaacaatgtcaag 350
Query: 301 cagtggttgaatgaaattgacagatatgcaaatgactctgtatgcaagcttcttgtgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 351 cagtggttgaatgaaattgacagatatgcaaatgactctgtatgcaagcttcttgtgggg 410
Query: 361 aataaatctgatctagttgaaaataaggttgttgacacgcaaactgctaag 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 aataaatctgatctagttgaaaataaggttgttgacacgcaaactgctaag 461
>gnl|LJGI|TC57519 UniRef100_Q40201 Cluster: RAB1A; n=1; Lotus japonicus|Rep: RAB1A -
Lotus japonicus, complete
Length = 885
Score = 799 bits (403), Expect = 0.0
Identities = 409/411 (99%)
Strand = Plus / Plus
Query: 1 atgagcaacgaatacgattacctgttcaagcttctactgatcggagactcctcagttgga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atgagcaacgaatacgattacctgttcaagcttctactgatcggagactcctcagttgga 188
Query: 61 aaatcttgcttgcttctccgatttgctgatgactcctatgtcgacagctacattagcacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 189 aaatcttgcttgcttctccgatttgctgatgactcctatgtcgacagctacattagcacc 248
Query: 121 attggcgttgatttcaaaatcagaactgtcgagctccaaggcaaaaccatcaagctgcag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 attggcgttgatttcaaaatcagaactgtcgagctccaaggcaaaaccatcaagctgcag 308
Query: 181 atttgggatactgctggacaggagcgcttcaggactataacaagcagttactatagagga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 atttgggatactgctggacaggagcgcttcaggactataacaagcagttactatagagga 368
Query: 241 gcacatggaataattattgtctatgatgtcactgagatggaaagcttcaacaatgtcaag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 gcacatggaataattattgtctatgatgtcactgagatggaaagcttcaacaatgtcaag 428
Query: 301 cagtggttgaatgaaattgacagatatgcaaatgactctgtatgcaagcttcttgtgaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 429 cagtggttgaatgaaattgacagatatgcaaatgactctgtatgcaagcttcttgtgggg 488
Query: 361 aataaatctgatctagttgaaaataaggttgttgacacgcaaactgctaag 411
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 aataaatctgatctagttgaaaataaggttgttgacacgcaaactgctaag 539
>gnl|LJGI|AU089325 UniRef100_Q40204 Cluster: RAB1D; n=1; Lotus japonicus|Rep: RAB1D -
Lotus japonicus, partial (79%)
Length = 757
Score = 85.7 bits (43), Expect = 2e-16
Identities = 199/251 (79%)
Strand = Plus / Plus
Query: 16 gattacctgttcaagcttctactgatcggagactcctcagttggaaaatcttgcttgctt 75
||||| ||||||||||| || || || |||||||| ||||||||||| ||| | |||
Sbjct: 63 gattatctgttcaagctccttcttattggagactctggtgttggaaaatcatgccttctt 122
Query: 76 ctccgatttgctgatgactcctatgtcgacagctacattagcaccattggcgttgatttc 135
|| ||||||||||||| || || | || |||||||| |||||||| || ||||||||
Sbjct: 123 ctgagatttgctgatgattcttacattgaaagctacataagcaccatcggagttgatttt 182
Query: 136 aaaatcagaactgtcgagctccaaggcaaaaccatcaagctgcagatttgggatactgct 195
||||| | ||||| |||| | | || ||||| || || ||||||||||||||||||
Sbjct: 183 aaaattcgcactgttgagcaggatgcaaagaccattaaactacagatttgggatactgct 242
Query: 196 ggacaggagcgcttcaggactataacaagcagttactatagaggagcacatggaataatt 255
|| || ||||| || ||||| ||||| || || |||||| | || || |||||||| |||
Sbjct: 243 gggcaagagcgttttaggacaataaccagtagctactatcgtggggctcatggaatcatt 302
Query: 256 attgtctatga 266
||||| |||||
Sbjct: 303 attgtttatga 313
>gnl|LJGI|TC70276 UniRef100_Q40204 Cluster: RAB1D; n=1; Lotus japonicus|Rep: RAB1D -
Lotus japonicus, complete
Length = 1070
Score = 85.7 bits (43), Expect = 2e-16
Identities = 199/251 (79%)
Strand = Plus / Plus
Query: 16 gattacctgttcaagcttctactgatcggagactcctcagttggaaaatcttgcttgctt 75
||||| ||||||||||| || || || |||||||| ||||||||||| ||| | |||
Sbjct: 235 gattatctgttcaagctccttcttattggagactctggtgttggaaaatcatgccttctt 294
Query: 76 ctccgatttgctgatgactcctatgtcgacagctacattagcaccattggcgttgatttc 135
|| ||||||||||||| || || | || |||||||| |||||||| || ||||||||
Sbjct: 295 ctgagatttgctgatgattcttacattgaaagctacataagcaccatcggagttgatttt 354
Query: 136 aaaatcagaactgtcgagctccaaggcaaaaccatcaagctgcagatttgggatactgct 195
||||| | ||||| |||| | | || ||||| || || ||||||||||||||||||
Sbjct: 355 aaaattcgcactgttgagcaggatgcaaagaccattaaactacagatttgggatactgct 414
Query: 196 ggacaggagcgcttcaggactataacaagcagttactatagaggagcacatggaataatt 255
|| || ||||| || ||||| ||||| || || |||||| | || || |||||||| |||
Sbjct: 415 gggcaagagcgttttaggacaataaccagtagctactatcgtggggctcatggaatcatt 474
Query: 256 attgtctatga 266
||||| |||||
Sbjct: 475 attgtttatga 485
>gnl|LJGI|TC61894 UniRef100_Q40203 Cluster: RAB1C; n=1; Lotus japonicus|Rep: RAB1C -
Lotus japonicus, complete
Length = 807
Score = 85.7 bits (43), Expect = 2e-16
Identities = 124/151 (82%)
Strand = Plus / Plus
Query: 181 atttgggatactgctggacaggagcgcttcaggactataacaagcagttactatagagga 240
|||||||| |||||||| || || || ||| |||| || |||||||| ||||| | ||
Sbjct: 332 atttgggacactgctggtcaagaacgtttccggacaatcacaagcagctactaccgtggg 391
Query: 241 gcacatggaataattattgtctatgatgtcactgagatggaaagcttcaacaatgtcaag 300
|| ||||| |||||| |||| |||||||||||||| || |||||||||||||| |||
Sbjct: 392 gctcatggcataattgttgtttatgatgtcactgaccaagagagcttcaacaatgttaag 451
Query: 301 cagtggttgaatgaaattgacagatatgcaa 331
|| ||| |||||||||||||| | |||||||
Sbjct: 452 caatggctgaatgaaattgaccgttatgcaa 482
>gnl|LJGI|TC58412 UniRef100_Q40203 Cluster: RAB1C; n=1; Lotus japonicus|Rep: RAB1C -
Lotus japonicus, complete
Length = 1083
Score = 85.7 bits (43), Expect = 2e-16
Identities = 124/151 (82%)
Strand = Plus / Plus
Query: 181 atttgggatactgctggacaggagcgcttcaggactataacaagcagttactatagagga 240
|||||||| |||||||| || || || ||| |||| || |||||||| ||||| | ||
Sbjct: 300 atttgggacactgctggtcaagaacgtttccggacaatcacaagcagctactaccgtggg 359
Query: 241 gcacatggaataattattgtctatgatgtcactgagatggaaagcttcaacaatgtcaag 300
|| ||||| |||||| |||| |||||||||||||| || |||||||||||||| |||
Sbjct: 360 gctcatggcataattgttgtttatgatgtcactgaccaagagagcttcaacaatgttaag 419
Query: 301 cagtggttgaatgaaattgacagatatgcaa 331
|| ||| |||||||||||||| | |||||||
Sbjct: 420 caatggctgaatgaaattgaccgttatgcaa 450
>gnl|LJGI|TC67644 UniRef100_Q40206 Cluster: RAB1X; n=1; Lotus japonicus|Rep: RAB1X -
Lotus japonicus, complete
Length = 1129
Score = 56.0 bits (28), Expect = 2e-07
Identities = 76/92 (82%)
Strand = Plus / Plus
Query: 181 atttgggatactgctggacaggagcgcttcaggactataacaagcagttactatagagga 240
|||||||| || || |||||||| | ||||||||| |||| || |||||||||||||
Sbjct: 305 atttgggacacagcgggacaggaaaggttcaggactctaaccagttcttactatagagga 364
Query: 241 gcacatggaataattattgtctatgatgtcac 272
|| || ||||| ||| |||| |||||||||||
Sbjct: 365 gcgcaaggaatcattcttgtttatgatgtcac 396
>gnl|LJGI|TC58877 homologue to UniRef100_A7NSN5 Cluster: Chromosome chr18 scaffold_1,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr18 scaffold_1, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (98%)
Length = 885
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 232 tatagaggagcacatggaataattattgtctatgatgt 269
|||||||||||||| ||||||||||| || ||||||||
Sbjct: 380 tatagaggagcacaaggaataattatggtatatgatgt 417