Miyakogusa Predicted Gene

Lj0g3v0072269.2
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0072269.2 Non Chatacterized Hit- tr|K3Z829|K3Z829_SETIT
Uncharacterized protein OS=Setaria italica
GN=Si022021,63.51,1e-17,PPR_2,Pentatricopeptide repeat;
PPR,Pentatricopeptide repeat; OS02G0126500 PROTEIN,NULL; FAMILY NOT
,CUFF.3568.2
         (444 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|TC62456 similar to UniRef100_A7PLZ7 Cluster: Chromosome...   825   0.0  

>gnl|LJGI|TC62456 similar to UniRef100_A7PLZ7 Cluster: Chromosome chr14 scaffold_21,
           whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
           Chromosome chr14 scaffold_21, whole genome shotgun
           sequence - Vitis vinifera (Grape), partial (46%)
          Length = 752

 Score =  825 bits (416), Expect = 0.0
 Identities = 416/416 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   atgatgcttgatggggtgaagccgaaccgtgacactttccattcccttgttgttgggacc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 atgatgcttgatggggtgaagccgaaccgtgacactttccattcccttgttgttgggacc 335

                                                                       
Query: 61  atgagaggctctagaatgcaagatgctttctacttcttgaatcaaatgaaaatcatgggt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 atgagaggctctagaatgcaagatgctttctacttcttgaatcaaatgaaaatcatgggt 395

                                                                       
Query: 121 ttggttcctgatgttactttatacaactttctgatttcaacttgtgggaaatccaagaac 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 ttggttcctgatgttactttatacaactttctgatttcaacttgtgggaaatccaagaac 455

                                                                       
Query: 181 tctgatcaggctattcagattttggaggagatgaagttcatggaagtaaagccaaatgta 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 tctgatcaggctattcagattttggaggagatgaagttcatggaagtaaagccaaatgta 515

                                                                       
Query: 241 cgaacctacatctgcttgctgcatgcttgtgcagccgatggacgcttagaccgagtgaat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 cgaacctacatctgcttgctgcatgcttgtgcagccgatggacgcttagaccgagtgaat 575

                                                                       
Query: 301 gcaattgttcgcgatatgactgcagctggtctgggattaaacaagttctgctatgcgggg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 576 gcaattgttcgcgatatgactgcagctggtctgggattaaacaagttctgctatgcgggg 635

                                                                   
Query: 361 cttatagttgctcacaagaacaaaacacctgttaccgatgattttgctgcaaaagt 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 cttatagttgctcacaagaacaaaacacctgttaccgatgattttgctgcaaaagt 691