Miyakogusa Predicted Gene

Lj0g3v0044789.1
Show Alignment:  

BLASTN 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Lj0g3v0044789.1 tr|G7L5T5|G7L5T5_MEDTR TMV resistance protein N
OS=Medicago truncatula GN=MTR_7g088950 PE=4 SV=1,70.42,3e-19,no
description,NULL; LRR_1,Leucine-rich repeat; L
domain-like,NULL,NODE_87653_length_186_cov_21.043011.path1.1
         (214 letters)

Database: LJGI 
           47,486 sequences; 32,788,469 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1;...    64   4e-10

>gnl|LJGI|DC597742 similar to UniRef100_A2Q6C2 Cluster: TIR; n=1; Medicago
           truncatula|Rep: TIR - Medicago truncatula (Barrel
           medic), partial (16%)
          Length = 590

 Score = 63.9 bits (32), Expect = 4e-10
 Identities = 59/68 (86%)
 Strand = Plus / Plus

                                                                       
Query: 136 atctataagttgaaatctctgaaaactctcatcctttctggatgtttaatgattgacaag 195
           |||||| ||||||||||| ||| ||||||||||||||| || |||| ||  ||||| |||
Sbjct: 5   atctatcagttgaaatctttgacaactctcatcctttcaggttgttcaaaaattgataag 64

                   
Query: 196 ttggaaga 203
           ||||||||
Sbjct: 65  ttggaaga 72