Miyakogusa Predicted Gene
- Lj0g3v0015879.1
BLASTN 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Lj0g3v0015879.1 Non Chatacterized Hit- tr|J3MZR6|J3MZR6_ORYBR
Uncharacterized protein OS=Oryza brachyantha GN=OB09G2,27.45,0.000005,
,CUFF.853.1
(393 letters)
Database: LJGI
47,486 sequences; 32,788,469 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gnl|LJGI|FS349507 similar to UniRef100_A7Q0F7 Cluster: Chromosom... 436 e-122
gnl|LJGI|TC70575 similar to UniRef100_A7Q0F7 Cluster: Chromosome... 92 3e-18
gnl|LJGI|TC63520 similar to UniRef100_A7QAI4 Cluster: Chromosome... 88 5e-17
>gnl|LJGI|FS349507 similar to UniRef100_A7Q0F7 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (33%)
Length = 684
Score = 436 bits (220), Expect = e-122
Identities = 220/220 (100%)
Strand = Plus / Plus
Query: 1 atgtatggaacttcccgtgttttgatttggatcagttcgaccttgagcagtaatggcatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 atgtatggaacttcccgtgttttgatttggatcagttcgaccttgagcagtaatggcatt 524
Query: 61 gaattgtccactcatggggaggcgtggatagatgttgcaagtttggaaaacaacagcggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 gaattgtccactcatggggaggcgtggatagatgttgcaagtttggaaaacaacagcggc 584
Query: 121 atttccaaatatgaaatcaactgtgccatagatgtcacattcacggtaaaattgcctcaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 atttccaaatatgaaatcaactgtgccatagatgtcacattcacggtaaaattgcctcaa 644
Query: 181 agagtgtgtgtacagagtgtcttgatacccttcaaagctg 220
||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 agagtgtgtgtacagagtgtcttgatacccttcaaagctg 684
>gnl|LJGI|TC70575 similar to UniRef100_A7Q0F7 Cluster: Chromosome chr7 scaffold_42,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome chr7 scaffold_42, whole genome shotgun
sequence - Vitis vinifera (Grape), partial (36%)
Length = 845
Score = 91.7 bits (46), Expect = 3e-18
Identities = 130/158 (82%)
Strand = Plus / Minus
Query: 5 atggaacttcccgtgttttgatttggatcagttcgaccttgagcagtaatggcattgaat 64
|||||| |||| |||| ||| || || || ||||| ||||| ||||| ||||| ||||||
Sbjct: 323 atggaagttcctgtgtcttggttagggtctgttcggccttgtgcagttatggcgttgaat 264
Query: 65 tgtccactcatggggaggcgtggatagatgttgcaagtttggaaaacaacagcggcattt 124
|| || |||| ||||| || ||||| |||||||| ||||||| ||||| |||||||
Sbjct: 263 tgccccttcatcgggagacgaggatacatgttgcagttttggaacacaaccttggcattt 204
Query: 125 ccaaatatgaaatcaactgtgccatagatgtcacattc 162
|||||||||||||| || ||||| |||||||| |||||
Sbjct: 203 ccaaatatgaaatccaccgtgccgtagatgtcgcattc 166
>gnl|LJGI|TC63520 similar to UniRef100_A7QAI4 Cluster: Chromosome undetermined
scaffold_71, whole genome shotgun sequence; n=1; Vitis
vinifera|Rep: Chromosome undetermined scaffold_71, whole
genome shotgun sequence - Vitis vinifera (Grape),
complete
Length = 999
Score = 87.7 bits (44), Expect = 5e-17
Identities = 125/152 (82%)
Strand = Plus / Minus
Query: 89 tagatgttgcaagtttggaaaacaacagcggcatttccaaatatgaaatcaactgtgcca 148
||||||||||| | ||||| || || || ||||| ||||| ||||| || || ||||||
Sbjct: 445 tagatgttgcagttctggaagaccactgcagcattgccaaaaatgaagtccacagtgcca 386
Query: 149 tagatgtcacattcacggtaaaattgcctcaaagagtgtgtgtacagagtgtcttgatac 208
||||| |||||||| | ||| |||||||||| |||||| || || ||||||||||||
Sbjct: 385 tagatatcacattctctgtagaattgcctcagagagtggacatagagtgtgtcttgatac 326
Query: 209 ccttcaaagctgcagctgtagaaggtggacag 240
||||| |||||||| | |||||| ||||||||
Sbjct: 325 ccttcgaagctgcaacggtagaaagtggacag 294