BLAST2 result
BLASTP 2.1.2 [Oct-19-2000]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33190.1 473 aa
(473 letters)
Database: nr
640,428 sequences; 201,912,487 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P06004|PSBC_PEA PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN ... 984 0.0
sp|P06413|PSBC_TOBAC PHOTOSYSTEM II 44 KD REACTION CENTER PROTEI... 984 0.0
gi|7525029 PSII 43 KDa protein [Arabidopsis thaliana] >gi|668579... 982 0.0
gb|AAD24583.1|AF134324_2 (AF134324) chlorophyll a-binding protei... 975 0.0
gi|11497521 PSII 44kd protein [Spinacia oleracea] >gi|131286|sp|... 974 0.0
pir||T08998 photosystem II protein, 44K - spinach chloroplast >g... 969 0.0
gi|11466771 PSII 43kDa protein [Oryza sativa] >gi|131283|sp|P121... 964 0.0
emb|CAB67143.1| (AJ271079) PSII 44kD protein [Oenothera elata su... 962 0.0
prf||1603356H photosystem II 43kD protein [Oryza sativa] 962 0.0
pir||JN0346 photosystem II chlorophyll a-binding protein psbC pr... 962 0.0
gi|11466699 psbC [Marchantia polymorpha] >gi|131282|sp|P06414|PS... 962 0.0
emb|CAA25802.1| (X01647) open reading frame (ORF701) pot. membra... 962 0.0
gi|11465950 PSII 44kd protein [Nicotiana tabacum] >gi|2924262|em... 959 0.0
sp|P10804|PSBC_SECCE PHOTOSYSTEM II 44 KD REACTION CENTER PROTEI... 959 0.0
sp|P11095|PSBC_HORVU PHOTOSYSTEM II 44 KD REACTION CENTER PROTEI... 957 0.0
gi|11467177 PSII 43 KDa protein [Zea mays] >gi|1346846|sp|P48187... 954 0.0
gi|7524715 PSII 44kDa protein [Pinus thunbergii] >gi|1172676|sp|... 952 0.0
emb|CAA31745.1| (X13366) pot. alt. CP-a2 protein (AA 1 - 461) [S... 936 0.0
gi|11467795 CP43 chlorophyll apoprotein of photosystem II [Nephr... 913 0.0
gi|11466346 CP43 chlorophyll apoprotein of photosystem II [Mesos... 904 0.0
gi|7524798 photosystem II 43kDa protein [Chlorella vulgaris] >gi... 898 0.0
gb|AAG26176.1| (AF123820) photosystem II CP43 protein [Drimys wi... 864 0.0
gb|AAG26162.1| (AF123813) photosystem II CP43 protein [Acorus ca... 864 0.0
sp|Q08684|PSBC_CHLEU PHOTOSYSTEM II 44 KD REACTION CENTER PROTEI... 863 0.0
gb|AAG44375.1| (AF235043) photosystem II CP43 protein [Amborella... 862 0.0
gb|AAG26166.1| (AF123815) photosystem II CP43 protein [Cabomba c... 862 0.0
gb|AAG26185.1| (AF123825) photosystem II CP43 protein [Liriodend... 862 0.0
gb|AAG26168.1| (AF123816) photosystem II CP43 protein [Calycanth... 862 0.0
gb|AAG26190.1| (AF123827) photosystem II CP43 protein [Trochoden... 861 0.0
gb|AAF82676.1| (AF188854) photosystem II CP43 protein [Nymphaea ... 861 0.0
gb|AAG26183.1| (AF123824) photosystem II CP43 protein [Lactoris ... 860 0.0
gb|AAG26188.1| (AF123826) photosystem II CP43 protein [Saururus ... 859 0.0
gb|AAG26181.1| (AF123823) photosystem II CP43 protein [Illicium ... 859 0.0
gi|11465822 Photosystem II 44 Kd apoprotein [Porphyra purpurea] ... 859 0.0
emb|CAA32084.1| (X13879) psbC protein (AA 1-461) [Chlamydomonas ... 858 0.0
sp|P10898|PSBC_CHLRE PHOTOSYSTEM II 44 KD REACTION CENTER PROTEI... 857 0.0
sp|P28254|PSBC_CYACA PHOTOSYSTEM II 44 KD REACTION CENTER PROTEI... 857 0.0
gb|AAG26174.1| (AF123819) photosystem II CP43 protein [Dioscorea... 855 0.0
gb|AAG26164.1| (AF123814) photosystem II CP43 protein [Asarum ca... 852 0.0
gi|11467391 CP43 [Cyanophora paradoxa] >gi|1346845|sp|P48104|PSB... 852 0.0
gb|AAG26172.1| (AF123818) photosystem II CP43 protein [Cercidiph... 851 0.0
gb|AAF73304.1| (AF188848) photosystem II CP43 protein [Zamia fur... 849 0.0
gb|AAG26178.1| (AF123821) photosystem II CP43 protein [Ginkgo bi... 842 0.0
gb|AAG26179.1| (AF123822) photosystem II CP43 protein [Gnetum gn... 840 0.0
sp|O78426|PSBC_GUITH PHOTOSYSTEM II 44 KD REACTION CENTER PROTEI... 834 0.0
gi|11467625 PSII CP43 apoprotein [Guillardia theta] >gi|3602950|... 834 0.0
gi|11467542 PSII, CP43 chlorophyll apoprotein [Odontella sinensi... 826 0.0
dbj|BAA17799.1| (D90909) photosystem II 44kD reaction center pro... 821 0.0
sp|P09193|PSBC_SYNY3 PHOTOSYSTEM II 44 KD REACTION CENTER PROTEI... 819 0.0
pir||S42647 photosystem II chlorophyll a-binding protein psbC - ... 811 0.0
pir||S06469 photosystem II chlorophyll a-binding protein psbC - ... 804 0.0
gi|11465588 unknown; Photosystem II 44 Kd apoprotein [Cyanidium ... 799 0.0
sp|P11004|PSBC_SYNP7 PHOTOSYSTEM II 44 KD REACTION CENTER PROTEI... 790 0.0
gb|AAG26170.1| (AF123817) photosystem II CP43 protein [Ceratophy... 787 0.0
prf||1707315B photosystem II CP43 protein [Synechococcus sp.] 786 0.0
gi|11466985 PSII polypeptide (CP43) [Euglena gracilis] >gi|46448... 778 0.0
sp|P51753|PSBC_PROHO PHOTOSYSTEM II 44 KD REACTION CENTER PROTEI... 757 0.0
gb|AAD44702.1| (AF130035) PSII CP43 apoprotein [Heterocapsa triq... 645 0.0
emb|CAA32263.1| (X14106) chlorophyll a/b-binding protein (AA 1 -... 629 e-179
emb|CAA30071.1| (X07018) psbC gene product (300 AA) [Synechocyst... 517 e-145
dbj|BAB18403.1| (AB044477) photosystem II CP43 apoprotein [Volvo... 481 e-135
dbj|BAB18453.1| (AB044527) photosystem II CP43 apoprotein [Chlam... 480 e-134
dbj|BAB18407.1| (AB044481) photosystem II CP43 apoprotein [Goniu... 480 e-134
dbj|BAB18424.1| (AB044498) photosystem II CP43 apoprotein [Volvu... 479 e-134
dbj|BAB18420.1| (AB044494) photosystem II CP43 apoprotein [Platy... 479 e-134
dbj|BAB18412.1| (AB044486) photosystem II CP43 apoprotein [Eudor... 479 e-134
dbj|BAB18402.1| (AB044476) photosystem II CP43 apoprotein [Volvo... 479 e-134
dbj|BAB18400.1| (AB044474) photosystem II CP43 apoprotein [Volvo... 479 e-134
dbj|BAB18438.1| (AB044512) photosystem II CP43 apoprotein [Pando... 478 e-134
dbj|BAB18430.1| (AB044504) photosystem II CP43 apoprotein [Volvu... 478 e-134
dbj|BAB18447.1| (AB044521) photosystem II CP43 apoprotein [Goniu... 478 e-134
dbj|BAB18431.1| (AB044505) photosystem II CP43 apoprotein [Pando... 478 e-134
dbj|BAB18425.1| (AB044499) photosystem II CP43 apoprotein [Volvu... 478 e-134
dbj|BAB18411.1| (AB044485) photosystem II CP43 apoprotein [Eudor... 477 e-133
dbj|BAB18455.1| (AB044529) photosystem II CP43 apoprotein [Vitre... 477 e-133
dbj|BAB18446.1| (AB044520) photosystem II CP43 apoprotein [Goniu... 477 e-133
dbj|BAB18427.1| (AB044501) photosystem II CP43 apoprotein [Volvu... 477 e-133
dbj|BAB18421.1| (AB044495) photosystem II CP43 apoprotein [Yamag... 476 e-133
dbj|BAB18454.1| (AB044528) photosystem II CP43 apoprotein [Chlam... 476 e-133
dbj|BAB18401.1| (AB044475) photosystem II CP43 apoprotein [Volvo... 476 e-133
dbj|BAB18435.1| (AB044509) photosystem II CP43 apoprotein [Pando... 476 e-133
dbj|BAB18426.1| (AB044500) photosystem II CP43 apoprotein [Volvu... 476 e-133
dbj|BAB18456.1| (AB044530) photosystem II CP43 apoprotein [Lobom... 475 e-133
dbj|BAB18451.1| (AB044525) photosystem II CP43 apoprotein [Tetra... 475 e-133
dbj|BAB18423.1| (AB044497) photosystem II CP43 apoprotein [Yamag... 475 e-133
dbj|BAB18422.1| (AB044496) photosystem II CP43 apoprotein [Yamag... 474 e-132
dbj|BAB18433.1| (AB044507) photosystem II CP43 apoprotein [Pando... 455 e-127
dbj|BAB18436.1| (AB044510) photosystem II CP43 apoprotein [Pando... 398 e-110
emb|CAC13147.1| (AJ296146) putative chl a/b-binding protein [Fis... 321 2e-86
emb|CAC08491.1| (AJ295840) CP 43' protein [Fischerella muscicola] 303 4e-81
sp|P31157|ISIA_SYNP2 IRON-STRESS INDUCED CHLOROPHYLL-BINDING PRO... 300 3e-80
emb|CAA65756.1| (X97043) chlorophyll a /b antenna, 38 kDa protei... 294 2e-78
emb|CAA96551.1| (Z72476) chlorophyll-binding protein [Prochloron... 286 4e-76
sp|Q55274|ISIA_SYNY3 IRON-STRESS INDUCED CHLOROPHYLL-BINDING PRO... 284 2e-75
gb|AAA27291.1| (L26530) iron-stress chlorophyll-binding protein ... 283 3e-75
pir||S42648 photosystem II chlorophyll a-binding protein isiA - ... 281 1e-74
sp|P15347|ISIA_SYNP7 IRON-STRESS INDUCED CHLOROPHYLL-BINDING PRO... 279 6e-74
pir||A30189 iron stress-induced hypothetical protein precursor -... 279 6e-74
dbj|BAB18440.1| (AB044514) photosystem II CP43 apoprotein [Astre... 279 7e-74
dbj|BAB18416.1| (AB044490) photosystem II CP43 apoprotein [Eudor... 277 3e-73
dbj|BAB18429.1| (AB044503) photosystem II CP43 apoprotein [Volvu... 275 6e-73
dbj|BAB18441.1| (AB044515) photosystem II CP43 apoprotein [Astre... 272 5e-72
dbj|BAB18458.1| (AB044532) photosystem II CP43 apoprotein [Pauls... 272 9e-72
dbj|BAB18448.1| (AB044522) photosystem II CP43 apoprotein [Goniu... 272 9e-72
dbj|BAB18413.1| (AB044487) photosystem II CP43 apoprotein [Eudor... 271 1e-71
dbj|BAB18445.1| (AB044519) photosystem II CP43 apoprotein [Astre... 262 6e-69
emb|CAA65757.1| (X97043) chlorophyll a /b antenna, 32 kDa protei... 250 2e-65
emb|CAA65758.1| (X97043) pcbB [Prochlorothrix hollandica] 244 2e-63
dbj|BAB18444.1| (AB044518) photosystem II CP43 apoprotein [Astre... 220 3e-56
prf||1010249B URF 1 [Euglena gracilis] 212 8e-54
dbj|BAB18414.1| (AB044488) photosystem II CP43 apoprotein [Eudor... 211 1e-53
dbj|BAB18457.1| (AB044531) photosystem II CP43 apoprotein [Pauls... 207 2e-52
dbj|BAB18428.1| (AB044502) photosystem II CP43 apoprotein [Volvu... 205 8e-52
dbj|BAB18439.1| (AB044513) photosystem II CP43 apoprotein [Astre... 205 1e-51
dbj|BAB18415.1| (AB044489) photosystem II CP43 apoprotein [Eudor... 203 3e-51
gb|AAC45351.1| (U57660) chlorophyll a/b binding light harvesting... 203 4e-51
gb|AAF61303.1|AF198528_1 (AF198528) chlorophyll a/b binding ligh... 177 3e-43
emb|CAA28193.1| (X04509) 44 kDA protein of photosystem II [Eugle... 174 3e-42
gb|AAF61306.1|AF198531_1 (AF198531) chlorophyll a/b binding ligh... 170 4e-41
emb|CAA96550.1| (Z72475) chlorophyll a/b light-harvesting protei... 167 3e-40
gb|AAC45352.1| (U57661) chlorophyll a/b binding light harvesting... 161 1e-38
prf||1010249C URF 2 C term [Euglena gracilis] 157 2e-37
gb|AAF61305.1|AF198530_1 (AF198530) chlorophyll a/b binding ligh... 155 8e-37
gb|AAF61304.1|AF198529_1 (AF198529) chlorophyll a/b binding ligh... 151 2e-35
gb|AAF61302.1|AF198527_1 (AF198527) chlorophyll a/b binding ligh... 150 4e-35
emb|CAA10617.1| (AJ132263) PSII CP43 chlorophyll apoprotein [Ske... 142 1e-32
gb|AAF61301.1|AF198526_1 (AF198526) chlorophyll a/b binding ligh... 138 2e-31
dbj|BAB18442.1| (AB044516) photosystem II CP43 apoprotein [Astre... 131 2e-29
emb|CAA30402.1| (X07522) psbC (AA 1-52) (1408 is 1st base in cod... 103 4e-21
sp|P31094|PSBB_SYNP7 PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 101 2e-20
gb|AAD10227.1| (U72054) psbC [Anabaena sp. CA] 100 5e-20
gi|11465788 Photosystem II p680 chlorophyll A apoprotein (CP-47)... 98 3e-19
dbj|BAB19261.1| (AB052566) CP47 protein [Thermosynechococcus elo... 96 9e-19
emb|CAA39391.1| (X55900) psbB product, chlorophyll a-binding apo... 96 9e-19
sp|P10900|PSBB_HORVU PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 96 9e-19
sp|P20093|PSBB_ANASP PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 96 1e-18
sp|P19819|PSBB_OENHO PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 96 1e-18
sp|O03061|PSBB_POPDE PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 95 2e-18
gi|11467310 PsbB subunit of the photosystem II complex [Cyanopho... 95 2e-18
sp|P05429|PSBB_SYNY3 PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 94 4e-18
gb|AAD51003.1|AF170925_1 (AF170925) photosystem II chlorophyll-b... 94 5e-18
gi|11465984 PSII 47kD protein [Nicotiana tabacum] >gi|131276|sp|... 94 5e-18
gi|7525059 PSII 47KDa protein [Arabidopsis thaliana] >gi|6685792... 93 6e-18
emb|CAA67379.1| (X98877) CP47 [Spinacia oleracea] 93 8e-18
gi|11497552 PSII 47kDa protein [Spinacia oleracea] >gi|7636133|e... 92 1e-17
gi|11467747 PSII CP47 apoprotein [Guillardia theta] >gi|6093809|... 92 1e-17
gb|AAD41884.1|AF153442_1 (AF153442) photosystem II chlorophyll a... 92 2e-17
prf||1612384A psbB gene [Pisum sativum] 92 2e-17
sp|P24065|PSBB_WHEAT PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 92 2e-17
sp|P09447|PSBB_SECCE PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 92 2e-17
gi|11465509 unknown; Photosystem II p680 chlorophyll A apoprotei... 91 2e-17
gi|11467217 PSII 47KDa protein [Zea mays] >gi|131268|sp|P05641|P... 91 3e-17
gi|11466815 PSII 47kDa protein [Oryza sativa] >gi|131271|sp|P121... 91 3e-17
gb|AAG26305.1| (AF123857) photosystem II CP47 protein [Trochoden... 90 4e-17
gb|AAG26269.1| (AF123848) photosystem II CP47 protein [Cercidiph... 90 4e-17
gi|11466350 CP47 chlorophyll apoprotein of photosystem II [Mesos... 90 5e-17
pir||QJSP6A photosystem II chlorophyll a-binding protein psbB - ... 90 7e-17
sp|P04160|PSBB_SPIOL PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 90 7e-17
gi|11467830 CP47 chlorophyll apoprotein of photosystem II [Nephr... 89 9e-17
gb|AAG26301.1| (AF123856) photosystem II CP47 protein [Saururus ... 89 2e-16
gb|AAG26257.1| (AF123845) photosystem II CP47 protein [Cabomba c... 88 3e-16
sp|P37255|PSBB_CHLRE PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 88 3e-16
gi|11466728 psbB [Marchantia polymorpha] >gi|131269|sp|P06412|PS... 88 3e-16
gb|AAG44370.1| (AF235042) CP47 protein [Amborella trichopoda] 87 5e-16
gb|AAG26293.1| (AF123854) photosystem II CP47 protein [Lactoris ... 87 6e-16
gb|AAF82666.1| (AF188851) photosystem II CP47 protein [Nymphaea ... 87 6e-16
gb|AAF72604.1| (AF222703) photosystem II apoprotein [Huperzia sq... 87 6e-16
gb|AAG26273.1| (AF123849) photosystem II CP47 protein [Dioscorea... 86 8e-16
gb|AAG26265.1| (AF123847) photosystem II CP47 protein [Ceratophy... 86 8e-16
gb|AAF72611.1| (AF222710) photosystem II apoprotein [Pisum sativum] 86 8e-16
gb|AAF72610.1| (AF222709) photosystem II apoprotein [Chloranthus... 86 8e-16
pir||S07546 photosystem II chlorophyll a-binding protein psbB - ... 86 8e-16
gb|AAF72599.1| (AF222698) photosystem II apoprotein [Adiantum ca... 86 1e-15
gb|AAF72597.1| (AF222696) photosystem II apoprotein [Equisetum p... 86 1e-15
gi|11467517 PSII, CP47 chlorophyll apoprotein [Odontella sinensi... 86 1e-15
gb|AAF72609.1| (AF222708) photosystem II apoprotein [Drimys wint... 85 1e-15
gi|7524675 PSII P680 chlorophyll A apoprotein [Pinus thunbergii]... 85 1e-15
gb|AAG26250.1| (AF123843) photosystem II CP47 protein [Acorus ca... 85 2e-15
sp|P27200|PSBB_PROHO PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEI... 85 2e-15
gb|AAG26297.1| (AF123855) photosystem II CP47 protein [Liriodend... 85 2e-15
gb|AAG26289.1| (AF123853) photosystem II CP47 protein [Illicium ... 85 2e-15
gb|AAF72605.1| (AF222704) photosystem II apoprotein [Welwitschia... 85 2e-15
dbj|BAB18437.1| (AB044511) photosystem II CP43 apoprotein [Pando... 84 3e-15
gb|AAG26277.1| (AF123850) photosystem II CP47 protein [Drimys wi... 84 4e-15
gb|AAG26254.1| (AF123844) photosystem II CP47 protein [Asarum ca... 84 4e-15
gb|AAF72603.1| (AF222702) photosystem II apoprotein [Ephedra twe... 84 4e-15
gi|11467039 PSII(CP47) polypeptide [Euglena gracilis] >gi|333447... 84 4e-15
gb|AAF72600.1| (AF222699) photosystem II apoprotein [Angiopteris... 83 5e-15
gi|7524847 photosystem II P680 chlorophyll A apoprotein CP-47 pr... 83 7e-15
gb|AAG26261.1| (AF123846) photosystem II CP47 protein [Calycanth... 83 9e-15
gb|AAF72608.1| (AF222707) photosystem II apoprotein [Psilotum nu... 82 2e-14
gb|AAF72601.1| (AF222700) photosystem II apoprotein [Encephalart... 81 3e-14
gb|AAG26285.1| (AF123852) photosystem II CP47 protein [Gnetum gn... 81 4e-14
emb|CAB75843.1| (AJ250263) photosystem II chlorophyll-binding pr... 80 5e-14
gb|AAF72602.1| (AF222701) photosystem II apoprotein [Araucaria a... 80 8e-14
gb|AAF72607.1| (AF222706) photosystem II apoprotein [Torreya cal... 78 2e-13
gb|AAF72598.1| (AF222697) photosystem II apoprotein [Cycas revol... 78 2e-13
gb|AAG26281.1| (AF123851) photosystem II CP47 protein [Ginkgo bi... 77 4e-13
gb|AAF72606.1| (AF222705) photosystem II apoprotein [Ginkgo biloba] 77 4e-13
gb|AAD44701.1| (AF130034) PSII CP47 apoprotein [Heterocapsa triq... 69 2e-10
gb|AAF73295.1| (AF188846) photosystem II CP47 protein [Zamia fur... 62 2e-08
emb|CAB16960.1| (Z99835) PsbC [Euglena myxocylindracea] >gi|3702... 52 2e-05
emb|CAB16958.1| (Z99834) PsbC [Lepocinclis buetschlii] 49 1e-04
emb|CAB16956.1| (Z99832) PsbC [Cryptoglena pigra] 43 0.011
dbj|BAA78035.1| (AB027572) PSII 43kDa protein [Triticum aestivum] 42 0.014
emb|CAA10849.1| (AJ222581) PsbC protein [Euglena anabaena] 39 0.095
dbj|BAB24660.1| (AK006582) putative [Mus musculus] 36 1.4
dbj|BAB05176.1| (AP001512) glycine betaine transporter [Bacillus... 36 1.4
sp|P96169|SGLT_VIBPA SODIUM/GLUCOSE COTRANSPORTER (NA(+)/GLUCOSE... 35 2.4
dbj|BAA11215.1| (D78137) Na+/glucose symporter [Vibrio parahaemo... 35 2.4
gb|AAC90628.1| (U48232) chlorophyll a-binding protein [Oenothera... 35 2.4
emb|CAA10853.1| (AJ222583) PsbC protein [Euglena spirogyra] 34 3.2
pir||D71112 hypothetical protein PH0667 - Pyrococcus horikoshii ... 34 3.2
pir||S60182 ATP-binding transport protein exsA - Rhizobium melil... 34 3.2
pir||JT0672 apolipoprotein A-I - pig 34 3.2
emb|CAA10855.1| (AJ222584) PsbC protein [Euglena viridis] 34 4.2
pir||T15310 hypothetical protein B0286.4 - Caenorhabditis elegan... 34 4.2
sp|P18648|APA1_PIG APOLIPOPROTEIN A-I PRECURSOR (APO-AI) 34 4.2
pir||A46018 apolipoprotein AI - pig >gi|164359|gb|AAA30992.1| (L... 34 4.2
emb|CAC28848.1| (AL513467) related to CAX4 protein [Neurospora c... 34 5.5
pir||A56704 regulatory protein Myef-2 - mouse (fragment) 34 5.5
pir||E82714 preprotein translocase SecY subunit XF1172 [imported... 33 7.1
emb|CAA10851.1| (AJ222582) PsbC protein [Euglena granulata] 33 7.1
gb|AAA78270.1| (U13262) myelin gene expression factor [Mus muscu... 33 7.1
>sp|P06004|PSBC_PEA PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
gb|AAB59336.1| (M27309) 44 kd photosystem II protein [Pisum sativum]
Length = 473
Score = 984 bits (2517), Expect = 0.0
Identities = 467/473 (98%), Positives = 470/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIG+FLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGSFLLVFKAF 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITN TLSPSI+FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNFTLSPSILFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL AL+VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>sp|P06413|PSBC_TOBAC PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||F2NT44 photosystem II chlorophyll a-binding protein psbC precursor -
common tobacco chloroplast
prf||1211235W photosystem II 44kD protein [Nicotiana tabacum]
Length = 473
Score = 984 bits (2517), Expect = 0.0
Identities = 467/473 (98%), Positives = 469/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYHVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>gi|7525029 PSII 43 KDa protein [Arabidopsis thaliana]
sp|P56778|PSBC_ARATH PHOTOSYSTEM II 44 KDA REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
dbj|BAA84381.1| (AP000423) PSII 43 KDa protein [Arabidopsis thaliana]
Length = 473
Score = 982 bits (2510), Expect = 0.0
Identities = 465/473 (98%), Positives = 469/473 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYHVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGVGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICI GGIWHILTKPFAWARRALVWSGEAYLSYSLAALSV GFIACCFVWFNNTAYPSE
Sbjct: 241 GSICIFGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVCGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL+TSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLSTSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>gb|AAD24583.1|AF134324_2 (AF134324) chlorophyll a-binding protein PsbC [Populus deltoides]
Length = 473
Score = 975 bits (2492), Expect = 0.0
Identities = 463/473 (97%), Positives = 466/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGW VSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWTVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL AL+VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRD EPVL MTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMTPLN 473
>gi|11497521 PSII 44kd protein [Spinacia oleracea]
sp|P06003|PSBC_SPIOL PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN PRECURSOR (P6 PROTEIN)
(CP43)
pir||F2SP44 photosystem II chlorophyll a-binding protein psbC precursor -
spinach chloroplast
gb|AAA84631.1| (M36833) 44 kD chlorophyll a apoprotein [Spinacia oleracea]
emb|CAB88722.1| (AJ400848) PSII 44kd protein [Spinacia oleracea]
Length = 473
Score = 974 bits (2490), Expect = 0.0
Identities = 463/473 (97%), Positives = 467/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTL L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLTLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITN+TLSPSIIFG LLKSPFGGEGWIVSVDDLEDIIGGHVW+
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNVTLSPSIIFGCLLKSPFGGEGWIVSVDDLEDIIGGHVWI 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GVICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL+TSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLSTSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>pir||T08998 photosystem II protein, 44K - spinach chloroplast
gb|AAA84634.1| (M27308) 44 kd photosystem II protein [Spinacia oleracea]
Length = 473
Score = 969 bits (2477), Expect = 0.0
Identities = 462/473 (97%), Positives = 466/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTL L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLTLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITN+TLSPSIIFG LLKSPFGGEGWIVSVDDLEDIIGGHVW+
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNVTLSPSIIFGCLLKSPFGGEGWIVSVDDLEDIIGGHVWI 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GVICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRS L+TSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSCLSTSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>gi|11466771 PSII 43kDa protein [Oryza sativa]
sp|P12158|PSBC_ORYSA PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||F2RZ44 photosystem II chlorophyll a-binding protein psbC precursor - rice
chloroplast
emb|CAA34014.1| (X15901) PSII 43kDa protein [Oryza sativa]
Length = 473
Score = 964 bits (2466), Expect = 0.0
Identities = 456/473 (96%), Positives = 459/473 (96%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IC+ GGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GFICVFGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVL MTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMTPLN 473
>emb|CAB67143.1| (AJ271079) PSII 44kD protein [Oenothera elata subsp. hookeri]
Length = 473
Score = 962 bits (2460), Expect = 0.0
Identities = 459/473 (97%), Positives = 462/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPSI+FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSILFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GFHLYTWRIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEP LSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPALSMTPLN 473
>prf||1603356H photosystem II 43kD protein [Oryza sativa]
Length = 472
Score = 962 bits (2460), Expect = 0.0
Identities = 455/472 (96%), Positives = 458/472 (96%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IC+ GGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GFICVFGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPL 472
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVL MTPL
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMTPL 472
>pir||JN0346 photosystem II chlorophyll a-binding protein psbC precursor -
barley chloroplast
Length = 473
Score = 962 bits (2459), Expect = 0.0
Identities = 453/473 (95%), Positives = 460/473 (96%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IC+ GGIWHILTKPFAWARRA VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GFICVFGGIWHILTKPFAWARRAFVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYL+RSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLIRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL+TSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVL M PLN
Sbjct: 421 SPRSWLSTSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMNPLN 473
>gi|11466699 psbC [Marchantia polymorpha]
sp|P06414|PSBC_MARPO PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||F2LV44 photosystem II chlorophyll a-binding protein psbC precursor -
liverwort (Marchantia polymorpha) chloroplast
emb|CAA28081.1| (X04465) psbC [Marchantia polymorpha]
Length = 473
Score = 962 bits (2459), Expect = 0.0
Identities = 452/473 (95%), Positives = 463/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYS RRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSQRRFYPVETLFNGTLALGGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGE++DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHAL+GPETLEESFPFFGYVWKD+NKMTTILGIHLILLG GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALIGPETLEESFPFFGYVWKDKNKMTTILGIHLILLGAGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVD+LEDIIGGHVWL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDNLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICI GGIWHILTKPFAWARRALVWSGEAYLSYSL A++VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICIFGGIWHILTKPFAWARRALVWSGEAYLSYSLGAIAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKY+MRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYIMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLS+LKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSKLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>emb|CAA25802.1| (X01647) open reading frame (ORF701) pot. membrane protein (aa
1-487) [Marchantia polymorpha]
Length = 487
Score = 962 bits (2459), Expect = 0.0
Identities = 452/473 (95%), Positives = 463/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYS RRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 15 MKILYSQRRFYPVETLFNGTLALGGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 74
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGE++DTFPYFVSGVLHLI
Sbjct: 75 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 134
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHAL+GPETLEESFPFFGYVWKD+NKMTTILGIHLILLG GAFLLVFKA
Sbjct: 135 SSAVLGFGGIYHALIGPETLEESFPFFGYVWKDKNKMTTILGIHLILLGAGAFLLVFKAL 194
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVD+LEDIIGGHVWL
Sbjct: 195 YFGGIYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDNLEDIIGGHVWL 254
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICI GGIWHILTKPFAWARRALVWSGEAYLSYSL A++VFGFIACCFVWFNNTAYPSE
Sbjct: 255 GSICIFGGIWHILTKPFAWARRALVWSGEAYLSYSLGAIAVFGFIACCFVWFNNTAYPSE 314
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKY+MRSPTGE+IFGGETMRFWD
Sbjct: 315 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYIMRSPTGEIIFGGETMRFWD 374
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLS+LKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 375 LRAPWLEPLRGPNGLDLSKLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 434
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 435 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 487
>gi|11465950 PSII 44kd protein [Nicotiana tabacum]
emb|CAA77414.1| (Z00044) PSII 44kd protein [Nicotiana tabacum]
Length = 461
Score = 959 bits (2452), Expect = 0.0
Identities = 455/461 (98%), Positives = 457/461 (98%)
Query: 13 VETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 72
VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV
Sbjct: 1 VETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 60
Query: 73 AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYH 132
AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYH
Sbjct: 61 AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYH 120
Query: 133 ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG 192
ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA YFGG+YDTWAPG
Sbjct: 121 ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKALYFGGVYDTWAPG 180
Query: 193 GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI 252
GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI
Sbjct: 181 GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI 240
Query: 253 LTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA 312
LTKPFAWARRALVWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA
Sbjct: 241 LTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA 300
Query: 313 QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP 372
QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP
Sbjct: 301 QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP 360
Query: 373 NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFV 432
NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFV
Sbjct: 361 NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFV 420
Query: 433 LGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
LGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 LGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 461
>sp|P10804|PSBC_SECCE PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||S03436 photosystem II chlorophyll a-binding protein psbC precursor - rye
chloroplast
emb|CAA31744.1| (X13366) pot. CP-a2 protein (AA 1 - 473) [Secale cereale]
Length = 473
Score = 959 bits (2452), Expect = 0.0
Identities = 453/473 (95%), Positives = 459/473 (96%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IC+ GGIWHILTKPFAWARRA VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAY SE
Sbjct: 241 GFICVFGGIWHILTKPFAWARRAFVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYSSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL+TSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVL M PLN
Sbjct: 421 SPRSWLSTSHFVLGFFPFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMNPLN 473
>sp|P11095|PSBC_HORVU PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
Length = 473
Score = 957 bits (2447), Expect = 0.0
Identities = 451/473 (95%), Positives = 458/473 (96%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IC+ GGIWHIL KP AWARRA VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GFICVFGGIWHILRKPLAWARRAFVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYL+RSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLIRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL+TSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVL M PLN
Sbjct: 421 SPRSWLSTSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMNPLN 473
>gi|11467177 PSII 43 KDa protein [Zea mays]
sp|P48187|PSBC_MAIZE PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||S58537 photosystem II chlorophyll a-binding protein psbC - maize
chloroplast
emb|CAA60271.1| (X86563) PSII 43 KDa protein [Zea mays]
Length = 473
Score = 954 bits (2439), Expect = 0.0
Identities = 449/473 (94%), Positives = 457/473 (95%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGF WWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFPWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVG GGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGSGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVW+DRNKMTT+LGIHLILLG+GAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWQDRNKMTTLLGIHLILLGLGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSIC+LGGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICVLGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLSRLKKD QPWQERRS EYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDGQPWQERRSGEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRD EPV+ MTPLN
Sbjct: 421 SPRSWLATSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDLEPVVYMTPLN 473
>gi|7524715 PSII 44kDa protein [Pinus thunbergii]
sp|P41643|PSBC_PINTH PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||T07548 photosystem II chlorophyll a-binding protein psbC - Japanese black
pine chloroplast
dbj|BAA04424.1| (D17510) PSII 44kDa protein [Pinus thunbergii]
Length = 473
Score = 952 bits (2434), Expect = 0.0
Identities = 446/473 (94%), Positives = 461/473 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRR Y VETLFNGT+AL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRSYPVETLFNGTIALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGE++DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHAL+GPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFL V KA
Sbjct: 121 SSAVLGFGGIYHALIGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGVGAFLPVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITN TL+PS IFGYLLKSPFGGEGWIVSVD+LED+IGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNPTLNPSAIFGYLLKSPFGGEGWIVSVDNLEDVIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICI GGIWHILTKPFAWARRA VWSGEAYLSYSLAALS+FGFIACCFVWFNNT YPSE
Sbjct: 241 GSICIFGGIWHILTKPFAWARRAFVWSGEAYLSYSLAALSLFGFIACCFVWFNNTVYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGA+VGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGASVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDLS+L+KDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 LRAPWLEPLRGPNGLDLSKLRKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL+TSHFVLGFF FVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN
Sbjct: 421 SPRSWLSTSHFVLGFFFFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
>emb|CAA31745.1| (X13366) pot. alt. CP-a2 protein (AA 1 - 461) [Secale cereale]
Length = 461
Score = 936 bits (2393), Expect = 0.0
Identities = 442/461 (95%), Positives = 448/461 (96%)
Query: 13 VETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 72
VETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV
Sbjct: 1 VETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 60
Query: 73 AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYH 132
AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLISSAVLGFGGIYH
Sbjct: 61 AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLISSAVLGFGGIYH 120
Query: 133 ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG 192
ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLV KA YFGG+YDTWAPG
Sbjct: 121 ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVLKALYFGGVYDTWAPG 180
Query: 193 GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI 252
GGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLG IC+ GGIWHI
Sbjct: 181 GGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGFICVFGGIWHI 240
Query: 253 LTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA 312
LTKPFAWARRA VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAY SEFYGPTGPEASQA
Sbjct: 241 LTKPFAWARRAFVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYSSEFYGPTGPEASQA 300
Query: 313 QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP 372
QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP
Sbjct: 301 QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP 360
Query: 373 NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFV 432
NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWL+TSHFV
Sbjct: 361 NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLSTSHFV 420
Query: 433 LGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
LGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVL M PLN
Sbjct: 421 LGFFPFVGHLWHAGRARAAAAGFEKGIDRDLEPVLYMNPLN 461
>gi|11467795 CP43 chlorophyll apoprotein of photosystem II [Nephroselmis
olivacea]
gb|AAD54817.1|AF137379_40 (AF137379) CP43 chlorophyll apoprotein of photosystem II
[Nephroselmis olivacea]
Length = 473
Score = 913 bits (2333), Expect = 0.0
Identities = 421/473 (89%), Positives = 448/473 (94%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGTL + GRDQE+TGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKNLYSLRRFYHVETLFNGTLIVGGRDQESTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLG+GVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGYGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGG+YH+L+GPETLEESFPFFGYVWKD+NKMTTILGIHL+LLG+GA LLV KA
Sbjct: 121 SSAVLGFGGVYHSLIGPETLEESFPFFGYVWKDKNKMTTILGIHLVLLGLGALLLVLKAR 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Y GG+YDTWAPGGGDVR ITN T SP++IFGY+LKSPFGGEGWIVSVD++ED+IGGH+W+
Sbjct: 181 YLGGVYDTWAPGGGDVRVITNPTTSPAVIFGYILKSPFGGEGWIVSVDNMEDVIGGHLWI 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G +C+ GGIWHILTKPF WARRA VWSGEAYLSYSL A+SV GFIACCFVWFNNT YPSE
Sbjct: 241 GLLCVFGGIWHILTKPFGWARRAFVWSGEAYLSYSLGAISVMGFIACCFVWFNNTVYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
RAPW+EPLRGPNGLDLS+LK DIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN+V
Sbjct: 361 TRAPWIEPLRGPNGLDLSKLKNDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNFV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL+TSHFVLGFF FV HLWHAGRARAAAAGFEKGIDRD EP L M PL+
Sbjct: 421 SPRSWLSTSHFVLGFFFFVAHLWHAGRARAAAAGFEKGIDRDTEPTLFMRPLD 473
>gi|11466346 CP43 chlorophyll apoprotein of photosystem II [Mesostigma viride]
gb|AAF43790.1|AF166114_2 (AF166114) CP43 chlorophyll apoprotein of photosystem II
[Mesostigma viride]
Length = 473
Score = 904 bits (2310), Expect = 0.0
Identities = 413/473 (87%), Positives = 452/473 (95%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVETLFNGTL+++GRDQE+TGFAWW+GNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYHVETLFNGTLSISGRDQESTGFAWWSGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHF PEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFTPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGG+YH+L+GPETLEESFPFFGYVWKD+NKMTTILGIHLI+LG+GA+LLV+KA
Sbjct: 121 SSAVLGFGGVYHSLIGPETLEESFPFFGYVWKDKNKMTTILGIHLIVLGVGAYLLVWKAC 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVR IT+ TLSP++IFGYLLKSPFGGEGWI SVD++ED+IGGH+W+
Sbjct: 181 YFGGVYDTWAPGGGDVRIITDPTLSPAVIFGYLLKSPFGGEGWICSVDNMEDVIGGHIWI 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G++ I GGIWHILTKP+AWARRA VWSGEAYLSYSL A++ G+IACCF WFNNTAYPSE
Sbjct: 241 GNLLIFGGIWHILTKPWAWARRAFVWSGEAYLSYSLGAIATMGWIACCFSWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGAN+ S+QGPTGLGKYLMRSP+GE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANIASSQGPTGLGKYLMRSPSGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
RAPW+EPLRGPNGLDL++LK DIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN+V
Sbjct: 361 CRAPWIEPLRGPNGLDLNKLKNDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNFV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHF L FF FVGHLWHAGRARAAAAGFEKGI+R+ EPVL M PL+
Sbjct: 421 SPRSWLATSHFTLAFFFFVGHLWHAGRARAAAAGFEKGIERETEPVLFMKPLD 473
>gi|7524798 photosystem II 43kDa protein [Chlorella vulgaris]
sp|P56308|PSBC_CHLVU PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||T07228 photosystem II chlorophyll a-binding protein psbC - Chlorella
vulgaris chloroplast
dbj|BAA57875.1| (AB001684) photosystem II 43kDa protein [Chlorella vulgaris]
Length = 473
Score = 898 bits (2295), Expect = 0.0
Identities = 413/473 (87%), Positives = 447/473 (94%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNG+L + GRDQE+TGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKNLYSLRRFYHVETLFNGSLVVGGRDQESTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLG+GVGPGGEVIDT+PYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGYGVGPGGEVIDTYPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGG+YH+L+GPETLEESFPFFGYVWKD+NKMTTILGIHLI+LG GA+LLV+KA
Sbjct: 121 SSAVLGFGGVYHSLVGPETLEESFPFFGYVWKDKNKMTTILGIHLIVLGFGAWLLVWKAM 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVR I+N T+SP +IF Y+LKSPFGG+GWIVSVD++ED+IGGH+W+
Sbjct: 181 YFGGIYDTWAPGGGDVRIISNPTVSPGVIFSYILKSPFGGDGWIVSVDNMEDVIGGHIWI 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G++CI GGIWHILTKP+AWARRA VWSGEAYLSYSL A+++ GF ACC WFN TAYPSE
Sbjct: 241 GTLCIFGGIWHILTKPWAWARRAFVWSGEAYLSYSLGAIALMGFTACCMSWFNTTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQ+Q FTFLVRDQRLGANV SAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQSQTFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
R PWLEPLRGPNGLDL++LK DIQPWQERR+AEYMTHAPLGSLNSVGGVATEINAVNYV
Sbjct: 361 FRGPWLEPLRGPNGLDLNKLKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINAVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWLATSHF LGFF FVGHLWHAGRARAAAAGFEKGIDRD EPVLSM PL+
Sbjct: 421 SPRSWLATSHFCLGFFFFVGHLWHAGRARAAAAGFEKGIDRDNEPVLSMRPLD 473
>gb|AAG26176.1| (AF123820) photosystem II CP43 protein [Drimys winteri]
Length = 418
Score = 864 bits (2209), Expect = 0.0
Identities = 410/418 (98%), Positives = 413/418 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGH+WL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHIWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>gb|AAG26162.1| (AF123813) photosystem II CP43 protein [Acorus calamus]
Length = 418
Score = 864 bits (2209), Expect = 0.0
Identities = 410/418 (98%), Positives = 413/418 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSL AL+VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>sp|Q08684|PSBC_CHLEU PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||S41480 photosystem II chlorophyll a-binding protein psbC - Chlamydomonas
eugametos chloroplast
gb|AAA84148.1| (M90639) chlorophyll a-binding protein [Chlamydomonas eugametos]
Length = 461
Score = 863 bits (2206), Expect = 0.0
Identities = 399/461 (86%), Positives = 431/461 (92%)
Query: 13 VETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 72
+ETLFNGTL + GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV
Sbjct: 1 METLFNGTLTVGGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 60
Query: 73 AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYH 132
+HFVPEKPMYEQGLILLPH+A+LG+GVGPGGEVIDTFPYFVSGVLHLISSAVLGFGG+YH
Sbjct: 61 SHFVPEKPMYEQGLILLPHIASLGYGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGVYH 120
Query: 133 ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG 192
+L+GPETLEESFPFFGY+WKD+NKMT+ILG HLI+LG GA+LLV KA YFGGIYDTWAPG
Sbjct: 121 SLIGPETLEESFPFFGYIWKDKNKMTSILGYHLIMLGCGAWLLVLKAMYFGGIYDTWAPG 180
Query: 193 GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI 252
GGDVR ITN T + + IFGYLL+SPFGG+GWI SVD+LEDIIGGH+W+G++CI GGIWHI
Sbjct: 181 GGDVRIITNPTTNFATIFGYLLRSPFGGDGWICSVDNLEDIIGGHIWIGTLCIFGGIWHI 240
Query: 253 LTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA 312
T P+ WARRA VWSGEAYLSYSL A++ GFIACCF WFNNTAYPSEFYGPTGPEASQA
Sbjct: 241 YTTPWPWARRAFVWSGEAYLSYSLGAIATMGFIACCFSWFNNTAYPSEFYGPTGPEASQA 300
Query: 313 QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP 372
QAFTFLVRDQRLGANV SAQGPTGLGKYLMRSPTGE+IFGGETMRFWD R PW EPLRGP
Sbjct: 301 QAFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPWCEPLRGP 360
Query: 373 NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFV 432
NGLDL++LK DIQPWQERR+AEYMTHAPLGSLNSVGGVATEINAVN+VSPRSWLATSHFV
Sbjct: 361 NGLDLNKLKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINAVNFVSPRSWLATSHFV 420
Query: 433 LGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
LGFF FVGHLWHAGRARAAAAGFEKGIDR EPVLSM PL+
Sbjct: 421 LGFFFFVGHLWHAGRARAAAAGFEKGIDRVDEPVLSMRPLD 461
>gb|AAG44375.1| (AF235043) photosystem II CP43 protein [Amborella trichopoda]
Length = 418
Score = 862 bits (2204), Expect = 0.0
Identities = 408/418 (97%), Positives = 412/418 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGVGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICILGGIWHILTKPFAWARRA VWSGEAYLSYSL ALS+FGFIACCFVWFNNTAYPSE
Sbjct: 241 GFICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSIFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>gb|AAG26166.1| (AF123815) photosystem II CP43 protein [Cabomba caroliniana]
Length = 418
Score = 862 bits (2203), Expect = 0.0
Identities = 407/418 (97%), Positives = 413/418 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVVDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVR+ITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRRITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSL AL+VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>gb|AAG26185.1| (AF123825) photosystem II CP43 protein [Liriodendron tulipifera]
Length = 418
Score = 862 bits (2202), Expect = 0.0
Identities = 408/418 (97%), Positives = 412/418 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTL+L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLSLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVVDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>gb|AAG26168.1| (AF123816) photosystem II CP43 protein [Calycanthus floridus]
Length = 418
Score = 862 bits (2202), Expect = 0.0
Identities = 409/418 (97%), Positives = 411/418 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSP +IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPGVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>gb|AAG26190.1| (AF123827) photosystem II CP43 protein [Trochodendron aralioides]
Length = 417
Score = 861 bits (2201), Expect = 0.0
Identities = 409/417 (98%), Positives = 412/417 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIG+FLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGSFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAV 417
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAV 417
>gb|AAF82676.1| (AF188854) photosystem II CP43 protein [Nymphaea odorata]
Length = 418
Score = 861 bits (2201), Expect = 0.0
Identities = 407/418 (97%), Positives = 412/418 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVVDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVR+ITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRRITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGF ACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFTACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>gb|AAG26183.1| (AF123824) photosystem II CP43 protein [Lactoris fernandeziana]
Length = 418
Score = 860 bits (2198), Expect = 0.0
Identities = 409/418 (97%), Positives = 411/418 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYS RRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSPRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGGIYDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGH+WL
Sbjct: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHIWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTF VRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFXVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>gb|AAG26188.1| (AF123826) photosystem II CP43 protein [Saururus cernuus]
Length = 417
Score = 859 bits (2196), Expect = 0.0
Identities = 408/417 (97%), Positives = 410/417 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAV 417
LRAPWLEPLRGPNGLDL RLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAV
Sbjct: 361 LRAPWLEPLRGPNGLDLGRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAV 417
>gb|AAG26181.1| (AF123823) photosystem II CP43 protein [Illicium parviflorum]
Length = 418
Score = 859 bits (2196), Expect = 0.0
Identities = 407/418 (97%), Positives = 412/418 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVR+ITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVW+
Sbjct: 181 YFGGVYDTWAPGGGDVRRITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWV 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G+ICILGG WHILTKPFAWARRALVWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GAICILGGTWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>gi|11465822 Photosystem II 44 Kd apoprotein [Porphyra purpurea]
sp|P51356|PSBC_PORPU PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||S73277 photosystem II 44K protein - red alga (Porphyra purpurea)
chloroplast
gb|AAC08242.1| (U38804) Photosystem II 44 Kd apoprotein [Porphyra purpurea]
Length = 487
Score = 859 bits (2196), Expect = 0.0
Identities = 391/473 (82%), Positives = 440/473 (92%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYS RRFYHVET FN + + GRD E+TGFAWW+GNARLIN+SGKLLGAHVAHAG++
Sbjct: 15 MKTLYSQRRFYHVETPFNTNVGVGGRDIESTGFAWWSGNARLINVSGKLLGAHVAHAGIM 74
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFW GAM LFEVAHFVPEKP+YEQGLIL+PHLATLGWGVGPGGE+ +T+PYFV GV+HLI
Sbjct: 75 VFWTGAMTLFEVAHFVPEKPLYEQGLILIPHLATLGWGVGPGGEIFNTYPYFVVGVVHLI 134
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGG+YH+L+GP+TLEESFPFFGY W+D+NKMTTILGIHL+LLGIGAFLLV K+
Sbjct: 135 SSAVLGFGGLYHSLIGPDTLEESFPFFGYDWRDKNKMTTILGIHLVLLGIGAFLLVIKSL 194
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
+ GG+YDTWAPGGGDVR ++N TL+P +IFGY+LKSPFGG+GWIVSV+++ED+IGGHVW+
Sbjct: 195 FVGGVYDTWAPGGGDVRFVSNPTLNPLVIFGYVLKSPFGGDGWIVSVNNMEDLIGGHVWI 254
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICI GGIWHILTKPFAWARRA VWSGEAYLSYSL ALS+ G A FVW+NNTAYPSE
Sbjct: 255 GIICIAGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSIMGLTASNFVWYNNTAYPSE 314
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANV S+QGPTGLGKYLMRSP+GE+IFGGETMRFWD
Sbjct: 315 FYGPTGPEASQAQAFTFLVRDQRLGANVASSQGPTGLGKYLMRSPSGEIIFGGETMRFWD 374
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPW+EPLRGPNGLDL+++K DIQPWQERR+AEYMTHAPLGSLNSVGGVATEIN+VNYV
Sbjct: 375 LRAPWVEPLRGPNGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNYV 434
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL TSHF LGFFLF+GHLWHAGRARAAAAGFEKGI+R+ EPVLSM PL+
Sbjct: 435 SPRSWLTTSHFFLGFFLFIGHLWHAGRARAAAAGFEKGINRENEPVLSMRPLD 487
>emb|CAA32084.1| (X13879) psbC protein (AA 1-461) [Chlamydomonas reinhardtii]
Length = 461
Score = 858 bits (2193), Expect = 0.0
Identities = 394/461 (85%), Positives = 431/461 (93%)
Query: 13 VETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 72
VETLFNGTL + GRDQETTGFAWW+GNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV
Sbjct: 1 VETLFNGTLTVGGRDQETTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 60
Query: 73 AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYH 132
+HFVPEKPMYEQGLILLPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH
Sbjct: 61 SHFVPEKPMYEQGLILLPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYH 120
Query: 133 ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG 192
+L+GPETLEES+PFFGYVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPG
Sbjct: 121 SLIGPETLEESYPFFGYVWKDKNKMTNILGYHLIMLGLGAWLLVWKAMYFGGVYDTWAPG 180
Query: 193 GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI 252
GGDVR ITN T + ++IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI
Sbjct: 181 GGDVRVITNPTTNAAVIFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHI 240
Query: 253 LTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA 312
T P+ WARRA VWSGEAYLSYSL A+ V GFIACC WFNNTAYPSEFYGPTGPEASQ+
Sbjct: 241 YTTPWPWARRAFVWSGEAYLSYSLGAIGVMGFIACCMSWFNNTAYPSEFYGPTGPEASQS 300
Query: 313 QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP 372
QAFTFLVRDQRLGANV SAQGPTGLGKYLMRSPTGE+IFGGETMRFWD R PWLEPLRGP
Sbjct: 301 QAFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPWLEPLRGP 360
Query: 373 NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFV 432
NGLDL++LK DIQPWQERR+AEYMTHAPLGSLNSVGGVATEINAVN+VSPRSWLA SHF
Sbjct: 361 NGLDLNKLKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINAVNFVSPRSWLACSHFC 420
Query: 433 LGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
LGFF F+GHLWHAGRARAAAAGFEKGIDR EPVLSM PL+
Sbjct: 421 LGFFFFIGHLWHAGRARAAAAGFEKGIDRFDEPVLSMRPLD 461
>sp|P10898|PSBC_CHLRE PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||S04025 photosystem II chlorophyll a-binding protein psbC - Chlamydomonas
reinhardtii chloroplast
Length = 461
Score = 857 bits (2190), Expect = 0.0
Identities = 393/461 (85%), Positives = 431/461 (93%)
Query: 13 VETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 72
+ETLFNGTL + GRDQETTGFAWW+GNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV
Sbjct: 1 METLFNGTLTVGGRDQETTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 60
Query: 73 AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYH 132
+HFVPEKPMYEQGLILLPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH
Sbjct: 61 SHFVPEKPMYEQGLILLPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYH 120
Query: 133 ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG 192
+L+GPETLEES+PFFGYVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPG
Sbjct: 121 SLIGPETLEESYPFFGYVWKDKNKMTNILGYHLIMLGLGAWLLVWKAMYFGGVYDTWAPG 180
Query: 193 GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI 252
GGDVR ITN T + ++IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI
Sbjct: 181 GGDVRVITNPTTNAAVIFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHI 240
Query: 253 LTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA 312
T P+ WARRA VWSGEAYLSYSL A+ V GFIACC WFNNTAYPSEFYGPTGPEASQ+
Sbjct: 241 YTTPWPWARRAFVWSGEAYLSYSLGAIGVMGFIACCMSWFNNTAYPSEFYGPTGPEASQS 300
Query: 313 QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP 372
QAFTFLVRDQRLGANV SAQGPTGLGKYLMRSPTGE+IFGGETMRFWD R PWLEPLRGP
Sbjct: 301 QAFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPWLEPLRGP 360
Query: 373 NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFV 432
NGLDL++LK DIQPWQERR+AEYMTHAPLGSLNSVGGVATEINAVN+VSPRSWLA SHF
Sbjct: 361 NGLDLNKLKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINAVNFVSPRSWLACSHFC 420
Query: 433 LGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
LGFF F+GHLWHAGRARAAAAGFEKGIDR EPVLSM PL+
Sbjct: 421 LGFFFFIGHLWHAGRARAAAAGFEKGIDRFDEPVLSMRPLD 461
>sp|P28254|PSBC_CYACA PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||F2KK4C photosystem II chlorophyll a-binding protein psbC precursor - red
alga (Cyanidium caldarium) chloroplast
emb|CAA44460.1| (X62578) P6 protein of PSII [Cyanidium caldarium]
Length = 473
Score = 857 bits (2189), Expect = 0.0
Identities = 393/469 (83%), Positives = 432/469 (91%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYS RRFYHVE FN + GR E+TG+AWWAGNARLIN+SGKLLGAHVAHAGLI
Sbjct: 1 MKILYSQRRFYHVEMPFNNRIEFAGRSIESTGYAWWAGNARLINVSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFW GAM LFEVAHF+PEKP+YEQG ILLPHLATLGWGVGP GE+IDT+PYFV GVLHL+
Sbjct: 61 VFWTGAMTLFEVAHFLPEKPLYEQGCILLPHLATLGWGVGPTGEIIDTYPYFVIGVLHLV 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGG+YH+L+GPE LEES+PFFGY W+D+NKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGLYHSLIGPEILEESYPFFGYDWRDKNKMTTILGIHLILLGIGAFLLVIKAM 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
+FGG+YDTWAPGGGDVR I N TL+P +IFGYLLKSPFGG+GWI+SV+++ED+IGGH+W+
Sbjct: 181 FFGGVYDTWAPGGGDVRYINNPTLNPLVIFGYLLKSPFGGDGWIISVNNMEDLIGGHIWI 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICI GGIWHILTKPF WARRA VWSGEAYLSYSLAALS+ GFIAC +VW+NNTAYPSE
Sbjct: 241 GLICIGGGIWHILTKPFGWARRAFVWSGEAYLSYSLAALSLMGFIACIYVWYNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLG NV SAQGPTGLGKYLMRSP+GEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGENVASAQGPTGLGKYLMRSPSGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPWLEPLRGPNGLDL+++K DIQPWQERR+AEYMTHAPLGS+NSVGGVATEIN+ NYV
Sbjct: 361 LRAPWLEPLRGPNGLDLNKIKNDIQPWQERRAAEYMTHAPLGSINSVGGVATEINSFNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSM 469
SPRSWL TSHFVLGFFLFV HLWHAGRARAAAAGFEKGI+R+ EPVLSM
Sbjct: 421 SPRSWLTTSHFVLGFFLFVAHLWHAGRARAAAAGFEKGINRENEPVLSM 469
>gb|AAG26174.1| (AF123819) photosystem II CP43 protein [Dioscorea bulbifera]
Length = 415
Score = 855 bits (2185), Expect = 0.0
Identities = 405/415 (97%), Positives = 408/415 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDI+GGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIMGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEIN 415
LRAPWLEPLRGPNGLDL RLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEIN
Sbjct: 361 LRAPWLEPLRGPNGLDLGRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEIN 415
>gb|AAG26164.1| (AF123814) photosystem II CP43 protein [Asarum canadense]
Length = 415
Score = 852 bits (2178), Expect = 0.0
Identities = 403/415 (97%), Positives = 406/415 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEV HFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVGHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSIC+ GGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICLFGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGP ASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPXASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEIN 415
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGV TEIN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVXTEIN 415
>gi|11467391 CP43 [Cyanophora paradoxa]
sp|P48104|PSBC_CYAPA PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||T06936 photosystem II chlorophyll a-binding protein psbC - Cyanophora
paradoxa cyanelle
gb|AAA81279.1| (U30821) CP43 [Cyanophora paradoxa]
Length = 461
Score = 852 bits (2178), Expect = 0.0
Identities = 388/461 (84%), Positives = 435/461 (94%)
Query: 13 VETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 72
+ETLFN ++A++GRDQ++TGFAWW+GNARLINLSGKLLGAHVAHAGLIVFW GAM LFEV
Sbjct: 1 METLFNSSVAVSGRDQQSTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWTGAMTLFEV 60
Query: 73 AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYH 132
AHF+PEKPMYEQGLILLPHLATLGWGVGPGGEVID +PYFV GVLHL+SSAVLGFGG+YH
Sbjct: 61 AHFIPEKPMYEQGLILLPHLATLGWGVGPGGEVIDVYPYFVVGVLHLVSSAVLGFGGLYH 120
Query: 133 ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG 192
A++GPE LEESFPFFGY WKD+NKMTTI+GIHLILLG GA LLV KA +FGG+YDTWAPG
Sbjct: 121 AIIGPEVLEESFPFFGYDWKDKNKMTTIIGIHLILLGSGALLLVLKAMFFGGVYDTWAPG 180
Query: 193 GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI 252
GGDVR I+N TL+P++IF Y+ KSP+GG+GWIVSVD++EDIIGGH+WL ICI+GG+WHI
Sbjct: 181 GGDVRVISNPTLNPTVIFSYITKSPWGGDGWIVSVDNMEDIIGGHIWLAFICIIGGVWHI 240
Query: 253 LTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA 312
LTKPF+WARRALVWSGEAYLSYSLAAL++ GFIA CFVWFNNTAYPSEF+GPTGPEASQA
Sbjct: 241 LTKPFSWARRALVWSGEAYLSYSLAALALMGFIANCFVWFNNTAYPSEFFGPTGPEASQA 300
Query: 313 QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP 372
QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSP+GE+IFGGETMRFWD RAPWLEPLRG
Sbjct: 301 QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPSGEIIFGGETMRFWDTRAPWLEPLRGA 360
Query: 373 NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFV 432
NGLDL+++K DIQPWQERR+AEYMTHAPLGSLNSVGGVATEIN+VNYVSPRSWL+TSHFV
Sbjct: 361 NGLDLTKIKYDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNYVSPRSWLSTSHFV 420
Query: 433 LGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
LGFFLF+GHLWHAGRARAA+ GFEKG+DR+ EPVLSM L+
Sbjct: 421 LGFFLFIGHLWHAGRARAASGGFEKGLDRENEPVLSMKLLD 461
>gb|AAG26172.1| (AF123818) photosystem II CP43 protein [Cercidiphyllum japonicum]
Length = 410
Score = 851 bits (2175), Expect = 0.0
Identities = 403/410 (98%), Positives = 406/410 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSL AL+VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGV 410
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGV
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGV 410
>gb|AAF73304.1| (AF188848) photosystem II CP43 protein [Zamia furfuracea]
Length = 418
Score = 849 bits (2170), Expect = 0.0
Identities = 400/418 (95%), Positives = 409/418 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVVDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHAL+GPETLEES PFFGYVWKDR+KMTTILGIHLILLG+GAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALIGPETLEESLPFFGYVWKDRSKMTTILGIHLILLGVGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITN TLSPS+IFGYLL+SPFGGEGWIVSVD+LEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNPTLSPSVIFGYLLESPFGGEGWIVSVDNLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICI GGIWHILTKPFAWARRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICIFGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>gb|AAG26178.1| (AF123821) photosystem II CP43 protein [Ginkgo biloba]
Length = 418
Score = 842 bits (2152), Expect = 0.0
Identities = 395/418 (94%), Positives = 407/418 (96%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYS RRFY VETLFNGTLAL GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSPRRFYPVETLFNGTLALAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGE++DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHAL+GPETLEESF FFGYVWKDRNKMTTILGIHLILLG+GAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALIGPETLEESFAFFGYVWKDRNKMTTILGIHLILLGVGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVR+ITNLTL PS++FGYLLKSPFGGEGWIVSVD+LEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRRITNLTLDPSVLFGYLLKSPFGGEGWIVSVDNLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICI GGIWHILTKPFAWARRA VWSGEAYLSYSL AL+VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICIFGGIWHILTKPFAWARRAFVWSGEAYLSYSLGALAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYG TGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGXTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLS+LKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSKLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>gb|AAG26179.1| (AF123822) photosystem II CP43 protein [Gnetum gnemon]
Length = 418
Score = 840 bits (2147), Expect = 0.0
Identities = 393/418 (94%), Positives = 406/418 (97%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYS RRFY VETLFNGTL L GRDQETTGFAWWAGNARLINLSGKLLGAHV+HAGLI
Sbjct: 1 MKTLYSPRRFYPVETLFNGTLTLAGRDQETTGFAWWAGNARLINLSGKLLGAHVSHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAG+MNLFEVAHF+PEKPMYEQGLILLPHLATLGWGVGPGGE++DTFPYFVSGVLHLI
Sbjct: 61 VFWAGSMNLFEVAHFIPEKPMYEQGLILLPHLATLGWGVGPGGEIVDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHAL+GPETLEESFPFFGY WKDRNKMTTILGIHLILLG GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALIGPETLEESFPFFGYTWKDRNKMTTILGIHLILLGAGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
+FGGIYDTWAPGGGDVRKITNLTLSP+IIFGYLLKSPFGGEGWIVSVD+LED+IGGH WL
Sbjct: 181 FFGGIYDTWAPGGGDVRKITNLTLSPNIIFGYLLKSPFGGEGWIVSVDNLEDLIGGHFWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICI GGIWHILTKPFAW RRA VWSGEAYLSYSL ALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICIFGGIWHILTKPFAWTRRAFVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGA+VGSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGASVGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
LRAPWLEPLRGPNGLDLS+LKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN
Sbjct: 361 LRAPWLEPLRGPNGLDLSKLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVN 418
>sp|O78426|PSBC_GUITH PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
Length = 473
Score = 834 bits (2131), Expect = 0.0
Identities = 374/473 (79%), Positives = 431/473 (91%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVET FN + + GRD E+TGFAWW+GN+RLIN+SGKLLGAHVAHAGL+
Sbjct: 1 MKTLYSLRRFYHVETPFNSNVGIAGRDIESTGFAWWSGNSRLINVSGKLLGAHVAHAGLM 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFW GAM LFEVAH++PEKP+YEQGLILLPHLATLGWGVGPGGE+ID +PYFV GVLHLI
Sbjct: 61 VFWCGAMTLFEVAHYIPEKPLYEQGLILLPHLATLGWGVGPGGEIIDVYPYFVVGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGG+YH+L+GP+TLEESFP FGY W+D+NK+TTILGIHL++LG GA LLV KA
Sbjct: 121 SSAVLGFGGVYHSLIGPDTLEESFPAFGYDWRDKNKITTILGIHLVILGFGALLLVIKAI 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Y GG+YDTWAPGGGDVR I N TL+P++IFGY+LKSP+GG+GWIVSV+++ED++GGH+W+
Sbjct: 181 YVGGLYDTWAPGGGDVRIIDNPTLNPAVIFGYVLKSPWGGDGWIVSVNNMEDVVGGHIWI 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G CI GG WHILTKPFAWARRA VWSGEAYLSYSL A+S+ FIA + W+NNT YPSE
Sbjct: 241 GFTCIAGGFWHILTKPFAWARRAYVWSGEAYLSYSLVAVSLMAFIASQYAWYNNTVYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQ+QAFTFLVRDQRLGA+V SAQGPTGLGKYLMRSP+GE+I GGET RFWD
Sbjct: 301 FYGPTGPEASQSQAFTFLVRDQRLGASVSSAQGPTGLGKYLMRSPSGEIILGGETQRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPW+EPLRGPNGLDL+++K DIQPWQERR+AEYMTHAPLGSLNSVGGVATEIN+VNYV
Sbjct: 361 LRAPWIEPLRGPNGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNYV 420
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL TSHF LGF ++GHLWHAGRARAAAAGFEKGI+R+ EPVL++ P++
Sbjct: 421 SPRSWLTTSHFFLGFAFYIGHLWHAGRARAAAAGFEKGINRENEPVLTLRPID 473
>gi|11467625 PSII CP43 apoprotein [Guillardia theta]
gb|AAC35611.1| (AF041468) PSII CP43 apoprotein [Guillardia theta]
Length = 487
Score = 834 bits (2131), Expect = 0.0
Identities = 374/473 (79%), Positives = 431/473 (91%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVET FN + + GRD E+TGFAWW+GN+RLIN+SGKLLGAHVAHAGL+
Sbjct: 15 MKTLYSLRRFYHVETPFNSNVGIAGRDIESTGFAWWSGNSRLINVSGKLLGAHVAHAGLM 74
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFW GAM LFEVAH++PEKP+YEQGLILLPHLATLGWGVGPGGE+ID +PYFV GVLHLI
Sbjct: 75 VFWCGAMTLFEVAHYIPEKPLYEQGLILLPHLATLGWGVGPGGEIIDVYPYFVVGVLHLI 134
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGG+YH+L+GP+TLEESFP FGY W+D+NK+TTILGIHL++LG GA LLV KA
Sbjct: 135 SSAVLGFGGVYHSLIGPDTLEESFPAFGYDWRDKNKITTILGIHLVILGFGALLLVIKAI 194
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Y GG+YDTWAPGGGDVR I N TL+P++IFGY+LKSP+GG+GWIVSV+++ED++GGH+W+
Sbjct: 195 YVGGLYDTWAPGGGDVRIIDNPTLNPAVIFGYVLKSPWGGDGWIVSVNNMEDVVGGHIWI 254
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G CI GG WHILTKPFAWARRA VWSGEAYLSYSL A+S+ FIA + W+NNT YPSE
Sbjct: 255 GFTCIAGGFWHILTKPFAWARRAYVWSGEAYLSYSLVAVSLMAFIASQYAWYNNTVYPSE 314
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQ+QAFTFLVRDQRLGA+V SAQGPTGLGKYLMRSP+GE+I GGET RFWD
Sbjct: 315 FYGPTGPEASQSQAFTFLVRDQRLGASVSSAQGPTGLGKYLMRSPSGEIILGGETQRFWD 374
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPW+EPLRGPNGLDL+++K DIQPWQERR+AEYMTHAPLGSLNSVGGVATEIN+VNYV
Sbjct: 375 LRAPWIEPLRGPNGLDLNKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNYV 434
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL TSHF LGF ++GHLWHAGRARAAAAGFEKGI+R+ EPVL++ P++
Sbjct: 435 SPRSWLTTSHFFLGFAFYIGHLWHAGRARAAAAGFEKGINRENEPVLTLRPID 487
>gi|11467542 PSII, CP43 chlorophyll apoprotein [Odontella sinensis]
sp|P49472|PSBC_ODOSI PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||S78347 photosystem II chlorophyll a-binding protein psbC - Odontella
sinensis chloroplast
emb|CAA91720.1| (Z67753) PSII, CP43 chlorophyll apoprotein [Odontella sinensis]
Length = 471
Score = 826 bits (2110), Expect = 0.0
Identities = 376/473 (79%), Positives = 428/473 (89%), Gaps = 2/473 (0%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRR+YHVET FN ++A GRD E+TGFAWW+GNARLIN+SGKLLGAHVAHAGL+
Sbjct: 1 MKTLYSLRRYYHVETPFNSSIA--GRDIESTGFAWWSGNARLINVSGKLLGAHVAHAGLM 58
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAM LFEV+HFVPEKP YEQG IL+ HLATLG+G+GPGGE+ T PYF GV+HLI
Sbjct: 59 VFWAGAMVLFEVSHFVPEKPTYEQGFILIQHLATLGYGIGPGGEITSTVPYFAVGVIHLI 118
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYH+LLGP+TLEESFPFFGY W+D+NKMTTILGIHL LLG+G+FLLV KA
Sbjct: 119 SSAVLGFGGIYHSLLGPDTLEESFPFFGYDWRDKNKMTTILGIHLCLLGVGSFLLVIKAM 178
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Y GG+YDTWAPGGGDVR IT TL+P +IFGY+ +SPFGG+GW+VSV+++EDIIGGH+W+
Sbjct: 179 YLGGVYDTWAPGGGDVRLITTPTLNPIVIFGYVFRSPFGGDGWVVSVNNMEDIIGGHIWV 238
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G +CI+GGIWHI TKPFAWARRA VWSGEAYLSYSLAA+S+ GF A + W+NNTAYPSE
Sbjct: 239 GLLCIIGGIWHIFTKPFAWARRAFVWSGEAYLSYSLAAISLMGFTAALYSWYNNTAYPSE 298
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
YGPTGPEASQ+QAFTFLVRDQRLGANV SAQGPTGLGKYLMRSP+GE+IFGGETMRFWD
Sbjct: 299 LYGPTGPEASQSQAFTFLVRDQRLGANVSSAQGPTGLGKYLMRSPSGEIIFGGETMRFWD 358
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
LRAPW+EPLRGPNGLD++++K DIQPWQERR+AEYMTHAPLGSLNSVGGVATEIN+VNYV
Sbjct: 359 LRAPWVEPLRGPNGLDINKIKNDIQPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNYV 418
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPRSWL SHF L FF +GH WH+GRARAAAAGFEKGI+R EPVLSM P++
Sbjct: 419 SPRSWLCCSHFFLAFFFLIGHWWHSGRARAAAAGFEKGINRANEPVLSMRPID 471
>dbj|BAA17799.1| (D90909) photosystem II 44kD reaction center protein [Synechocystis
sp.]
Length = 472
Score = 821 bits (2098), Expect = 0.0
Identities = 385/473 (81%), Positives = 420/473 (88%), Gaps = 1/473 (0%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTL SLRRF V TL N T + GRD +TGFAWW+GNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLSSLRRFSPVVTLSN-TSMVGGRDLPSTGFAWWSGNARLINLSGKLLGAHVAHAGLI 59
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAM LFEVAHF+PEKPMYEQGLILLPH+ATLGWGVGP GEV D FP+FV GVLHLI
Sbjct: 60 VFWAGAMTLFEVAHFIPEKPMYEQGLILLPHIATLGWGVGPAGEVTDIFPFFVVGVLHLI 119
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLG GGIYHAL GPE LEE FFGY WKD+N+MT I+G HLILLG GA LLVFKA
Sbjct: 120 SSAVLGLGGIYHALRGPEVLEEYSSFFGYDWKDKNQMTNIIGYHLILLGCGALLLVFKAM 179
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
+FGG+YDTWAPGGGDVR ITN TL+P+IIFGYLLK+PFGGEGWI+SV+++EDIIGGH+W+
Sbjct: 180 FFGGVYDTWAPGGGDVRVITNPTLNPAIIFGYLLKAPFGGEGWIISVNNMEDIIGGHIWI 239
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICI GGIWHILTKPF WARRAL+WSGEAYLSYSL ALS+ GFIA FVWFNNTAYPSE
Sbjct: 240 GLICISGGIWHILTKPFGWARRALIWSGEAYLSYSLGALSLMGFIASVFVWFNNTAYPSE 299
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTG EASQ+QAFTFLVRDQRLGAN+ SAQGPTGLGKYLMRSP+GE+IFGGETMRFWD
Sbjct: 300 FYGPTGMEASQSQAFTFLVRDQRLGANIASAQGPTGLGKYLMRSPSGEIIFGGETMRFWD 359
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
R PWLEPLRGPNGLDL +L+ DIQPWQ RR+AEYMTHAPLGSLNSVGGV T++N+ NYV
Sbjct: 360 FRGPWLEPLRGPNGLDLDKLRNDIQPWQVRRAAEYMTHAPLGSLNSVGGVITDVNSFNYV 419
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPR+WLATSHFVLGFF VGHLWHAGRARAAAAGFEKGIDR+ EP L M L+
Sbjct: 420 SPRAWLATSHFVLGFFFLVGHLWHAGRARAAAAGFEKGIDRETEPTLFMPDLD 472
>sp|P09193|PSBC_SYNY3 PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
gb|AAA85378.1| (M21538) chlorophyll a-binding protein [Synechocystis sp.]
prf||1503273A chlorophyll a binding protein CP43 [Synechocystis sp.]
Length = 472
Score = 819 bits (2093), Expect = 0.0
Identities = 384/473 (81%), Positives = 419/473 (88%), Gaps = 1/473 (0%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTL SLRRF V TL N T + GRD +TGFAWW+GNARLINLSGKLLGAHV HAGLI
Sbjct: 1 MKTLSSLRRFSPVVTLSN-TSMVGGRDLPSTGFAWWSGNARLINLSGKLLGAHVRHAGLI 59
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAM LFEVAHF+PEKPMYEQGLILLPH+ATLGWGVGP GEV D FP+FV GVLHLI
Sbjct: 60 VFWAGAMTLFEVAHFIPEKPMYEQGLILLPHIATLGWGVGPAGEVTDIFPFFVVGVLHLI 119
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLG GGIYHAL GPE LEE FFGY WKD+N+MT I+G HLILLG GA LLVFKA
Sbjct: 120 SSAVLGLGGIYHALRGPEVLEEYSSFFGYDWKDKNQMTNIIGYHLILLGCGALLLVFKAM 179
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
+FGG+YDTWAPGGGDVR ITN TL+P+IIFGYLLK+PFGGEGWI+SV+++EDIIGGH+W+
Sbjct: 180 FFGGVYDTWAPGGGDVRVITNPTLNPAIIFGYLLKAPFGGEGWIISVNNMEDIIGGHIWI 239
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICI GGIWHILTKPF WARRAL+WSGEAYLSYSL ALS+ GFIA FVWFNNTAYPSE
Sbjct: 240 GLICISGGIWHILTKPFGWARRALIWSGEAYLSYSLGALSLMGFIASVFVWFNNTAYPSE 299
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTG EASQ+QAFTFLVRDQRLGAN+ SAQGPTGLGKYLMRSP+GE+IFGGETMRFWD
Sbjct: 300 FYGPTGMEASQSQAFTFLVRDQRLGANIASAQGPTGLGKYLMRSPSGEIIFGGETMRFWD 359
Query: 361 LRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYV 420
R PWLEPLRGPNGLDL +L+ DIQPWQ RR+AEYMTHAPLGSLNSVGGV T++N+ NYV
Sbjct: 360 FRGPWLEPLRGPNGLDLDKLRNDIQPWQVRRAAEYMTHAPLGSLNSVGGVITDVNSFNYV 419
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
SPR+WLATSHFVLGFF VGHLWHAGRARAAAAGFEKGIDR+ EP L M L+
Sbjct: 420 SPRAWLATSHFVLGFFFLVGHLWHAGRARAAAAGFEKGIDRETEPTLFMPDLD 472
>pir||S42647 photosystem II chlorophyll a-binding protein psbC - Anabaena sp.
(strain PCC 7120)
Length = 459
Score = 811 bits (2073), Expect = 0.0
Identities = 370/449 (82%), Positives = 408/449 (90%)
Query: 25 GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQ 84
GRDQE++GFAWW+GNARLINLSGKLLGAHVAHAGLIVFWAGAM LFEVAHF+PEKP+YEQ
Sbjct: 11 GRDQESSGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFEVAHFIPEKPVYEQ 70
Query: 85 GLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESF 144
GLILLPH+ATLGWGVG GGEVIDTFPYFV GVLHLISSAVLGFGGIYHA+ GPETLEE
Sbjct: 71 GLILLPHVATLGWGVGVGGEVIDTFPYFVVGVLHLISSAVLGFGGIYHAVRGPETLEEYS 130
Query: 145 PFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTL 204
FFGY WKD+NKMT I+G HLI+LG GA LLV KA +FGG+YDTWAPGGGDVR ITN TL
Sbjct: 131 SFFGYDWKDKNKMTNIIGFHLIILGCGALLLVLKAMFFGGVYDTWAPGGGDVRVITNPTL 190
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
+P++IFGYLLKSPFGGEGWIVSV+++ED+IGGH+W+ ICI GGIWHI TKPF WARRA
Sbjct: 191 NPAVIFGYLLKSPFGGEGWIVSVNNMEDVIGGHIWIALICISGGIWHIFTKPFGWARRAF 250
Query: 265 VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRL 324
+WSGEAYLSYSL ALS+ GFIA C VW+NNT YPSEF+GPTGPEASQAQA TFLVRDQRL
Sbjct: 251 IWSGEAYLSYSLGALSLMGFIASCMVWYNNTVYPSEFFGPTGPEASQAQALTFLVRDQRL 310
Query: 325 GANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDI 384
GANVGSAQGPTGLGKYLMRSP+GE+IFGGETMRFWD + PWLEPLRGPNGLDL ++K DI
Sbjct: 311 GANVGSAQGPTGLGKYLMRSPSGEIIFGGETMRFWDFQGPWLEPLRGPNGLDLDKIKNDI 370
Query: 385 QPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
QPWQ RR+AEYMTHAPLGSLNSVGGVATEIN+ NYVSPR+WLATSHFVLGFF +GHLWH
Sbjct: 371 QPWQARRAAEYMTHAPLGSLNSVGGVATEINSFNYVSPRAWLATSHFVLGFFFLIGHLWH 430
Query: 445 AGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
AGRARAAA GFEKGIDR+ EP ++M L+
Sbjct: 431 AGRARAAAGGFEKGIDRENEPAMAMGDLD 459
>pir||S06469 photosystem II chlorophyll a-binding protein psbC - Synechocystis
sp. (strain PCC 6803)
Length = 460
Score = 804 bits (2054), Expect = 0.0
Identities = 371/456 (81%), Positives = 407/456 (88%)
Query: 18 NGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVP 77
+ T + GRD +TGFAWW+GNARLINLSGKLLGAHV HAGLIVFWAGAM LFEVAHF+P
Sbjct: 5 SNTSMVGGRDLPSTGFAWWSGNARLINLSGKLLGAHVRHAGLIVFWAGAMTLFEVAHFIP 64
Query: 78 EKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGP 137
EKPMYEQGLILLPH+ATLGWGVGP GEV D FP+FV GVLHLISSAVLG GGIYHAL GP
Sbjct: 65 EKPMYEQGLILLPHIATLGWGVGPAGEVTDIFPFFVVGVLHLISSAVLGLGGIYHALRGP 124
Query: 138 ETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVR 197
E LEE FFGY WKD+N+MT I+G HLILLG GA LLVFKA +FGG+YDTWAPGGGDVR
Sbjct: 125 EVLEEYSSFFGYDWKDKNQMTNIIGYHLILLGCGALLLVFKAMFFGGVYDTWAPGGGDVR 184
Query: 198 KITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPF 257
ITN TL+P+IIFGYLLK+PFGGEGWI+SV+++EDIIGGH+W+G ICI GGIWHILTKPF
Sbjct: 185 VITNPTLNPAIIFGYLLKAPFGGEGWIISVNNMEDIIGGHIWIGLICISGGIWHILTKPF 244
Query: 258 AWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTF 317
WARRAL+WSGEAYLSYSL ALS+ GFIA FVWFNNTAYPSEFYGPTG EASQ+QAFTF
Sbjct: 245 GWARRALIWSGEAYLSYSLGALSLMGFIASVFVWFNNTAYPSEFYGPTGMEASQSQAFTF 304
Query: 318 LVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDL 377
LVRDQRLGAN+ SAQGPTGLGKYLMRSP+GE+IFGGETMRFWD R PWLEPLRGPNGLDL
Sbjct: 305 LVRDQRLGANIASAQGPTGLGKYLMRSPSGEIIFGGETMRFWDFRGPWLEPLRGPNGLDL 364
Query: 378 SRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFL 437
+L+ DIQPWQ RR+AEYMTHAPLGSLNSVGGV T++N+ NYVSPR+WLATSHFVLGFF
Sbjct: 365 DKLRNDIQPWQVRRAAEYMTHAPLGSLNSVGGVITDVNSFNYVSPRAWLATSHFVLGFFF 424
Query: 438 FVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
VGHLWHAGRARAAAAGFEKGIDR+ EP L M L+
Sbjct: 425 LVGHLWHAGRARAAAAGFEKGIDRETEPTLFMPDLD 460
>gi|11465588 unknown; Photosystem II 44 Kd apoprotein [Cyanidium caldarium]
gb|AAF13025.1|AF022186_199 (AF022186) unknown; Photosystem II 44 Kd apoprotein [Cyanidium
caldarium]
Length = 460
Score = 799 bits (2041), Expect = 0.0
Identities = 360/449 (80%), Positives = 409/449 (90%)
Query: 25 GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQ 84
GR E+TGFAWW+GNARLINLSGKLLGAHVAHAGLIVFW GAM LFE +HF+PEKP+YEQ
Sbjct: 12 GRSIESTGFAWWSGNARLINLSGKLLGAHVAHAGLIVFWTGAMTLFETSHFIPEKPLYEQ 71
Query: 85 GLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESF 144
G+ILLPHLATLGWGV PGGE+++T+PYF +GV+HL+SSAVLGFGGIYH+++GP+ LE+SF
Sbjct: 72 GMILLPHLATLGWGVAPGGEIVNTYPYFATGVIHLVSSAVLGFGGIYHSIVGPDVLEDSF 131
Query: 145 PFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTL 204
FFGY W+D+NKMTTILGIHLILLGIGAFLLV KA + GGIYDTWAPGGGD+R ITN TL
Sbjct: 132 SFFGYDWRDKNKMTTILGIHLILLGIGAFLLVIKALFIGGIYDTWAPGGGDIRFITNPTL 191
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
+P+IIF YLLKSPFGGEGWIV V+++ED+IGGH+W+G C++GGIWHILT+PF+WARRA
Sbjct: 192 NPAIIFSYLLKSPFGGEGWIVGVNNMEDVIGGHIWIGVTCVIGGIWHILTRPFSWARRAF 251
Query: 265 VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRL 324
VWSGEAYLSYSL AL++ G A + W+NNT YPSEFYGPT EASQAQAFTFLVRDQRL
Sbjct: 252 VWSGEAYLSYSLGALALMGQTAAEYAWYNNTVYPSEFYGPTAAEASQAQAFTFLVRDQRL 311
Query: 325 GANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDI 384
GAN+ S QGPTGLGKYLMRSPTGEVI GGETMRFWDLRAPWLEPLR NGLDL+++K DI
Sbjct: 312 GANIASTQGPTGLGKYLMRSPTGEVILGGETMRFWDLRAPWLEPLRSSNGLDLNKIKNDI 371
Query: 385 QPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
QPWQERR+AEYMTHAPLGSLNSVGGVATEIN+VNYVSPRSWL TSHF LGFF+F+GHLWH
Sbjct: 372 QPWQERRAAEYMTHAPLGSLNSVGGVATEINSVNYVSPRSWLTTSHFFLGFFIFIGHLWH 431
Query: 445 AGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
AGRARAAAAGFEKGI+R+ EPVLSM PL+
Sbjct: 432 AGRARAAAAGFEKGINRENEPVLSMRPLD 460
>sp|P11004|PSBC_SYNP7 PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||JT0322 photosystem II chlorophyll a-binding protein psbC - Synechococcus
sp. (strain PCC 7942)
gb|AAA27359.1| (M20814) psbC thylakoid protein [Synechococcus sp.]
Length = 461
Score = 790 bits (2019), Expect = 0.0
Identities = 367/459 (79%), Positives = 408/459 (87%)
Query: 15 TLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAH 74
TL + ++ GRD ++TG+AWW+GNARLINLSGKLLGAHVAHAGLIVFWAGAM LFEVAH
Sbjct: 3 TLSSPSVIAGGRDIDSTGYAWWSGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFEVAH 62
Query: 75 FVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHAL 134
FVPEKPMYEQG+ILL HLATLGWGVGPGGEV+DTFPYFV GVLHLISSAVLG GGIYHAL
Sbjct: 63 FVPEKPMYEQGIILLSHLATLGWGVGPGGEVVDTFPYFVVGVLHLISSAVLGLGGIYHAL 122
Query: 135 LGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGG 194
GPE+LEE FF WKD+N+MT I+G HLILLG+GAFLLVFKA +FGG+YDTWAPGGG
Sbjct: 123 RGPESLEEYSTFFSQDWKDKNQMTNIIGYHLILLGLGAFLLVFKAMFFGGVYDTWAPGGG 182
Query: 195 DVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILT 254
DVR I+N TL+P++IFGYLLKSPFGG+GWIVSVD+LED+IGGH+W+G ICI GGIWHILT
Sbjct: 183 DVRIISNPTLNPAVIFGYLLKSPFGGDGWIVSVDNLEDVIGGHIWIGLICISGGIWHILT 242
Query: 255 KPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQA 314
KPF W RA +W+GEAYLSYSL ALS+ GFIA VW+NNT YPSEF+GPT EASQ+QA
Sbjct: 243 KPFGWVGRAFIWNGEAYLSYSLGALSLMGFIASTMVWYNNTVYPSEFFGPTAAEASQSQA 302
Query: 315 FTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNG 374
FTFLVRDQRLGAN+GSAQGPTGLGKYLMRSPTGE+IFGGETMRFWD R P +EPLRGPNG
Sbjct: 303 FTFLVRDQRLGANIGSAQGPTGLGKYLMRSPTGEIIFGGETMRFWDFRGPCVEPLRGPNG 362
Query: 375 LDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLG 434
LDL +L DIQPWQ RR+AEYMTHAPLGSLNSVGGVATEIN+VN+VSPR+WLATS FVL
Sbjct: 363 LDLDKLTNDIQPWQARRAAEYMTHAPLGSLNSVGGVATEINSVNFVSPRAWLATSPFVLA 422
Query: 435 FFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
FF VGHLWHAGRARAAAAGFEKGIDR EPVL+M L+
Sbjct: 423 FFFLVGHLWHAGRARAAAAGFEKGIDRATEPVLAMRDLD 461
>gb|AAG26170.1| (AF123817) photosystem II CP43 protein [Ceratophyllum demersum]
Length = 378
Score = 787 bits (2011), Expect = 0.0
Identities = 370/378 (97%), Positives = 375/378 (98%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTLYSLRRFYHVETLFNGTL+L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKTLYSLRRFYHVETLFNGTLSLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLVFKA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVFKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
GSICILGGIWHILTKPFAWARRA VWSGEAYLSYSLAAL+VFGFIACCFVWFNNTAYPSE
Sbjct: 241 GSICILGGIWHILTKPFAWARRAFVWSGEAYLSYSLAALAVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD
Sbjct: 301 FYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD 360
Query: 361 LRAPWLEPLRGPNGLDLS 378
LRAPWLEPLRGPNGLDLS
Sbjct: 361 LRAPWLEPLRGPNGLDLS 378
>prf||1707315B photosystem II CP43 protein [Synechococcus sp.]
Length = 472
Score = 786 bits (2008), Expect = 0.0
Identities = 365/470 (77%), Positives = 408/470 (86%), Gaps = 1/470 (0%)
Query: 4 LYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFW 63
LYSLRR+Y + TL N ++ GRD E+TGFAWWAGNARLINLSGKLLGAHVAHAGLIVFW
Sbjct: 4 LYSLRRYYPMVTLSNAPIS-GGRDIESTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFW 62
Query: 64 AGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSA 123
GAM LFEVAHFV EKPM+EQG IL+PHLATLGWGVGPGGEVIDTFPYFV GVLHLISSA
Sbjct: 63 TGAMTLFEVAHFVAEKPMHEQGFILMPHLATLGWGVGPGGEVIDTFPYFVVGVLHLISSA 122
Query: 124 VLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFG 183
VLG GGIYHA+ GPETLEE FFGY WKD+N+MT I+G HLILLG GA LLVFKA +FG
Sbjct: 123 VLGLGGIYHAVRGPETLEEYSSFFGYDWKDKNQMTNIIGYHLILLGCGALLLVFKAMFFG 182
Query: 184 GIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSI 243
G+YDTWAPGGGDVR I+N TL+P++IFGYL K+PFGGEGW++ V+++EDIIGGH+++G I
Sbjct: 183 GVYDTWAPGGGDVRIISNPTLNPAVIFGYLFKAPFGGEGWMIGVNNMEDIIGGHIYVGLI 242
Query: 244 CILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
CI GGIWHILTKPF WARRALVWSGEAYLSYSL ALS+ FIA CFVWFNNTAYPSEFYG
Sbjct: 243 CIFGGIWHILTKPFGWARRALVWSGEAYLSYSLGALSLMAFIATCFVWFNNTAYPSEFYG 302
Query: 304 PTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRA 363
PT EASQ+QA FL RDQ +GANVGSAQGPTGLGKYLMRSPTGE+I GGETMRFWD R
Sbjct: 303 PTNAEASQSQALIFLARDQSMGANVGSAQGPTGLGKYLMRSPTGEIILGGETMRFWDFRG 362
Query: 364 PWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPR 423
PWLEPLRGPNGLDL +++ DIQPWQ RR+A+YMTHAP S+NSVGG+ TE N+ N+V+ R
Sbjct: 363 PWLEPLRGPNGLDLDKIRNDIQPWQLRRAAQYMTHAPNASINSVGGIITEPNSFNFVNLR 422
Query: 424 SWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
WLA SHFVL FF VGHLWHAGRARAA AGFEKGIDR+ EPVL+M L+
Sbjct: 423 QWLAGSHFVLSFFFLVGHLWHAGRARAAEAGFEKGIDRETEPVLNMNELD 472
>gi|11466985 PSII polypeptide (CP43) [Euglena gracilis]
sp|P05700|PSBC_EUGGR PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
pir||S34498 photosystem II chlorophyll a-binding protein psbC - Euglena
gracilis chloroplast
emb|CAA50079.1| (X70810) PSII polypeptide (CP43) [Euglena gracilis]
Length = 461
Score = 778 bits (1987), Expect = 0.0
Identities = 358/461 (77%), Positives = 400/461 (86%)
Query: 13 VETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEV 72
+ETLFN L + GRDQE+TGFAWWAGNARLIN+SGKLLGAHVAHAGLIVFW GAMNLFEV
Sbjct: 1 METLFNKKLTVGGRDQESTGFAWWAGNARLINVSGKLLGAHVAHAGLIVFWTGAMNLFEV 60
Query: 73 AHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYH 132
AHFVP+KPMYEQGLILLPHLATLG+GVG G V+DT+P+FV GVLHLISSAVLGFGG++H
Sbjct: 61 AHFVPQKPMYEQGLILLPHLATLGFGVGFDGIVLDTYPFFVCGVLHLISSAVLGFGGVFH 120
Query: 133 ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG 192
+L GP+TLEESF FFGY WK + K+ ILGIHL LG+GA LL +KA Y GG+YDTW PG
Sbjct: 121 SLAGPDTLEESFRFFGYTWKRKKKLAAILGIHLCFLGLGALLLAWKAMYGGGVYDTWWPG 180
Query: 193 GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI 252
GGDVR ITN TL+P IIFGYL+KSPFGGEGWIVSVD +E +IGGH+W+G + + GG WHI
Sbjct: 181 GGDVRSITNPTLNPFIIFGYLVKSPFGGEGWIVSVDSMEYVIGGHIWIGILLVSGGFWHI 240
Query: 253 LTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA 312
++P W R VWSGEAYLSYSL A++ GFIA VWFNNT YPSEFYGPTGPEASQA
Sbjct: 241 CSRPSPWVVRTFVWSGEAYLSYSLGAVATMGFIAVPMVWFNNTVYPSEFYGPTGPEASQA 300
Query: 313 QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGP 372
QAFTFL+RDQRLG N+ SAQGPTGLGKYLM+SPTGE+IFGGETMRFWD R PWLEPLRGP
Sbjct: 301 QAFTFLIRDQRLGTNIASAQGPTGLGKYLMKSPTGEIIFGGETMRFWDFRGPWLEPLRGP 360
Query: 373 NGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFV 432
NGLDL++LK D+QPWQERR+AEYMTHAPLGSLNSVGGVATEINAVN+V+PRSWLATSHFV
Sbjct: 361 NGLDLNKLKNDVQPWQERRAAEYMTHAPLGSLNSVGGVATEINAVNFVNPRSWLATSHFV 420
Query: 433 LGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
L FF FVGHLWHAGRARAAA GFEKGIDR E + PL+
Sbjct: 421 LAFFFFVGHLWHAGRARAAAIGFEKGIDRSREIARKLKPLD 461
>sp|P51753|PSBC_PROHO PHOTOSYSTEM II 44 KD REACTION CENTER PROTEIN (P6 PROTEIN) (CP43)
gb|AAA82945.1| (U40144) CP43 [Prochlorothrix hollandica]
Length = 458
Score = 757 bits (1934), Expect = 0.0
Identities = 343/449 (76%), Positives = 388/449 (86%)
Query: 25 GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQ 84
G D +T+G+ WWAGNARLINLSGKLLGAHVAHAGLIVFWAGAM LFEVAHF PEKP+YEQ
Sbjct: 10 GSDLKTSGYPWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMTLFEVAHFTPEKPLYEQ 69
Query: 85 GLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESF 144
G ILLPHLA+LGWGVGPGGE+ D PYF+ GVLHLISSAVLG GG+YH L GPETLE+
Sbjct: 70 GDILLPHLASLGWGVGPGGEITDITPYFIVGVLHLISSAVLGLGGVYHTLRGPETLEQYS 129
Query: 145 PFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTL 204
FF WKD+N+MT ILG HLI+LGIGA L VFKA +FGG+YD W PGGG VR ITN TL
Sbjct: 130 DFFSQDWKDKNQMTNILGFHLIVLGIGASLFVFKAMFFGGLYDPWVPGGGGVRVITNPTL 189
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
SPS++FGYL +SPFGGEGW++ V+++ED++GGH+W+ C +GG WH++T+PF WARR+L
Sbjct: 190 SPSVLFGYLFRSPFGGEGWLIGVNNMEDVVGGHIWVALHCFIGGAWHLITRPFNWARRSL 249
Query: 265 VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRL 324
VWSGEAYLSYSL ALS+ GFIA FVWFNNT YPSEFYGPTG EASQAQ+FTFL+RDQRL
Sbjct: 250 VWSGEAYLSYSLGALSLMGFIASMFVWFNNTVYPSEFYGPTGSEASQAQSFTFLIRDQRL 309
Query: 325 GANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDI 384
GAN+ SAQGPTGLGKYLMRSPTGEVIFGGETMRFWD R PWLEPLRGPNGLDL +L D+
Sbjct: 310 GANIASAQGPTGLGKYLMRSPTGEVIFGGETMRFWDFRGPWLEPLRGPNGLDLDKLNNDV 369
Query: 385 QPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
QPWQ RR+AEYMTHAPL S+NSVGGV TE N+VNYV+ R WLA SHF+LGFF +GHLWH
Sbjct: 370 QPWQIRRAAEYMTHAPLASINSVGGVITEPNSVNYVNLRQWLAGSHFILGFFFLIGHLWH 429
Query: 445 AGRARAAAAGFEKGIDRDFEPVLSMTPLN 473
AGRARAAAAGFEKGIDR EPVLSM+ L+
Sbjct: 430 AGRARAAAAGFEKGIDRKTEPVLSMSDLD 458
>gb|AAD44702.1| (AF130035) PSII CP43 apoprotein [Heterocapsa triquetra]
Length = 460
Score = 645 bits (1646), Expect = 0.0
Identities = 293/445 (65%), Positives = 363/445 (80%), Gaps = 4/445 (0%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
++WW+GNAR I LSGK LGAH+AHAGLI+FW+G+M LFE++HF PEKP+YEQG ILLPHL
Sbjct: 16 YSWWSGNARFIELSGKFLGAHLAHAGLIMFWSGSMTLFELSHFAPEKPLYEQGFILLPHL 75
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEES-FPF-FGYV 150
ATL +GVGPGGE+ DT+ YFV GVLHLISS VL GGIYH++ GPE LEE+ + F FGY
Sbjct: 76 ATLAFGVGPGGEITDTYSYFVCGVLHLISSGVLALGGIYHSIFGPERLEETTYGFLFGYQ 135
Query: 151 WKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVR--KITNLTLSPSI 208
W+DR +MT ILG HL +G+ + LL KA Y GG+YDTWA GGGDVR K ++LTL+P I
Sbjct: 136 WQDRFRMTAILGAHLGTIGLASTLLFVKAVYLGGLYDTWASGGGDVRIIKDSSLTLNPYI 195
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
+ YL+++PFG EGWI+S++++ED++GGH W+G ++GG+WHI T+PF R WSG
Sbjct: 196 LGRYLVRAPFGSEGWIISINNMEDLVGGHYWVGIYTLIGGVWHIQTRPFGVVVRGFTWSG 255
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYL+YSL+ALS+ GFIA + W+NNTAYPSEFYGPTGPEASQAQ FTFLVRDQ+LG V
Sbjct: 256 EAYLAYSLSALSLMGFIAAVYAWYNNTAYPSEFYGPTGPEASQAQGFTFLVRDQKLGIKV 315
Query: 329 GSAQGPTGLGKYLMRSPTGEVIFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQ 388
S+QGPT L KYLMRSP+GEVIFGGETMRFW ++ W+EPLR GLD+ +++ DIQ WQ
Sbjct: 316 ASSQGPTALAKYLMRSPSGEVIFGGETMRFWSVQGGWVEPLRTSFGLDIYKIQSDIQSWQ 375
Query: 389 ERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA 448
ERR+AEYMTHAPLG+LNSVGGVATE+N+VNYVSPRSWL +SH+V G+F+ VGH WH GRA
Sbjct: 376 ERRAAEYMTHAPLGALNSVGGVATEVNSVNYVSPRSWLTSSHWVFGYFILVGHWWHGGRA 435
Query: 449 RAAAAGFEKGIDRDFEPVLSMTPLN 473
RA+A E G+ R +EPVL M P++
Sbjct: 436 RASALSSEGGLSRIYEPVLYMRPID 460
>emb|CAA32263.1| (X14106) chlorophyll a/b-binding protein (AA 1 - 309) (928 is 1st
base in codon) [Hordeum vulgare]
Length = 309
Score = 629 bits (1606), Expect = e-179
Identities = 293/309 (94%), Positives = 298/309 (95%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEV+DTFPYFVSGVLHLI
Sbjct: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVLDTFPYFVSGVLHLI 120
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLG+GAFLLV KA
Sbjct: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGLGAFLLVLKAL 180
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
YFGG+YDTWAPGGGDVRKITNLTLSPS+IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL
Sbjct: 181 YFGGVYDTWAPGGGDVRKITNLTLSPSVIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G IC+ GGIWHIL KP AWARRA VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE
Sbjct: 241 GFICVFGGIWHILRKPLAWARRAFVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
Query: 301 FYGPTGPEA 309
FYGPTGPEA
Sbjct: 301 FYGPTGPEA 309
>emb|CAA30071.1| (X07018) psbC gene product (300 AA) [Synechocystis PCC6803]
Length = 300
Score = 517 bits (1316), Expect = e-145
Identities = 243/301 (80%), Positives = 265/301 (87%), Gaps = 1/301 (0%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGAHVAHAGLI 60
MKTL SLRRF V TL N T + GRD +TGFAWW+GNARLINLSGKLLGAHV HAGLI
Sbjct: 1 MKTLSSLRRFSPVVTLSN-TSMVGGRDLPSTGFAWWSGNARLINLSGKLLGAHVRHAGLI 59
Query: 61 VFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLI 120
VFWAGAMNLFEVAHF+PEKPMYEQGLILLPH+ATLGWGVGP GEV D FP+FV GVLHLI
Sbjct: 60 VFWAGAMNLFEVAHFIPEKPMYEQGLILLPHIATLGWGVGPAGEVTDIFPFFVVGVLHLI 119
Query: 121 SSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKAS 180
SSAVLG GGIYHAL GPE LEE FFGY WKD+N+MT I+GIHLILLG GA LLVFKA
Sbjct: 120 SSAVLGLGGIYHALRGPEVLEEYSSFFGYDWKDKNQMTNIIGIHLILLGCGALLLVFKAM 179
Query: 181 YFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWL 240
+FGG+YDTWAPGGGDVR ITN TL+P+IIFGYLLK+PFGGEGWI+SV+++EDIIGGH+W+
Sbjct: 180 FFGGVYDTWAPGGGDVRVITNPTLNPAIIFGYLLKAPFGGEGWIISVNNMEDIIGGHIWI 239
Query: 241 GSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
G ICI GGIWHILTKPF WARRAL+WSGEAYLSYSL ALS+ GFIA FVWFNNTAYPSE
Sbjct: 240 GLICISGGIWHILTKPFGWARRALIWSGEAYLSYSLGALSLMGFIASVFVWFNNTAYPSE 299
Query: 301 F 301
F
Sbjct: 300 F 300
>dbj|BAB18403.1| (AB044477) photosystem II CP43 apoprotein [Volvox barberi]
dbj|BAB18404.1| (AB044478) photosystem II CP43 apoprotein [Volvox globator]
dbj|BAB18405.1| (AB044479) photosystem II CP43 apoprotein [Volvox rousseletii]
Length = 260
Score = 481 bits (1226), Expect = e-135
Identities = 217/260 (83%), Positives = 244/260 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACCF WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCFSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18453.1| (AB044527) photosystem II CP43 apoprotein [Chlamydomonas debaryana]
Length = 260
Score = 480 bits (1222), Expect = e-134
Identities = 215/260 (82%), Positives = 241/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPHLATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFG
Sbjct: 1 LPHLATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + +
Sbjct: 61 YVWKDKNKMTNILGYHLIMLGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAGV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IF YL+KSPFGG+GWI SVD++EDIIGGH+W+G++CILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFNYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLCILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSL A++V GF ACCF WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLGAIAVMGFTACCFSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18407.1| (AB044481) photosystem II CP43 apoprotein [Gonium multicoccum]
Length = 260
Score = 480 bits (1222), Expect = e-134
Identities = 217/260 (83%), Positives = 242/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T S ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTSAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSL A+SV GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLGAISVMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18424.1| (AB044498) photosystem II CP43 apoprotein [Volvulina compacta]
Length = 260
Score = 479 bits (1220), Expect = e-134
Identities = 216/260 (83%), Positives = 243/260 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18420.1| (AB044494) photosystem II CP43 apoprotein [Platydorina caudata]
Length = 260
Score = 479 bits (1219), Expect = e-134
Identities = 216/260 (83%), Positives = 242/260 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSL A+SV GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLGAISVMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18412.1| (AB044486) photosystem II CP43 apoprotein [Eudorina elegans]
Length = 260
Score = 479 bits (1219), Expect = e-134
Identities = 216/260 (83%), Positives = 243/260 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRIITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18402.1| (AB044476) photosystem II CP43 apoprotein [Volvox dissipatrix]
dbj|BAB18406.1| (AB044480) photosystem II CP43 apoprotein [Pleodorina californica]
dbj|BAB18408.1| (AB044482) photosystem II CP43 apoprotein [Pleodorina japonica]
dbj|BAB18409.1| (AB044483) photosystem II CP43 apoprotein [Pleodorina indica]
dbj|BAB18410.1| (AB044484) photosystem II CP43 apoprotein [Eudorina illinoisensis]
dbj|BAB18419.1| (AB044493) photosystem II CP43 apoprotein [Eudorina cylindrica]
Length = 260
Score = 479 bits (1219), Expect = e-134
Identities = 215/260 (82%), Positives = 243/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGD+R ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDIRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18400.1| (AB044474) photosystem II CP43 apoprotein [Volvox aureus]
Length = 260
Score = 479 bits (1219), Expect = e-134
Identities = 215/260 (82%), Positives = 243/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGD+R ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDIRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCISWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18438.1| (AB044512) photosystem II CP43 apoprotein [Pandorina colemaniae]
Length = 260
Score = 478 bits (1218), Expect = e-134
Identities = 216/260 (83%), Positives = 243/260 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGGIYDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGIYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18430.1| (AB044504) photosystem II CP43 apoprotein [Volvulina boldii]
dbj|BAB18434.1| (AB044508) photosystem II CP43 apoprotein [Pandorina morum]
Length = 260
Score = 478 bits (1217), Expect = e-134
Identities = 216/260 (83%), Positives = 242/260 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGGIYDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGIYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSL A+SV GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLGAISVMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18447.1| (AB044521) photosystem II CP43 apoprotein [Gonium pectorale]
Length = 260
Score = 478 bits (1216), Expect = e-134
Identities = 215/260 (82%), Positives = 242/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSL A++V GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLGAIAVMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18431.1| (AB044505) photosystem II CP43 apoprotein [Pandorina morum]
Length = 260
Score = 478 bits (1216), Expect = e-134
Identities = 214/260 (82%), Positives = 243/260 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGD+R ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDIRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18425.1| (AB044499) photosystem II CP43 apoprotein [Volvulina pringsheimii]
dbj|BAB18450.1| (AB044524) photosystem II CP43 apoprotein [Gonium viridistellatum]
Length = 260
Score = 478 bits (1216), Expect = e-134
Identities = 215/260 (82%), Positives = 243/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+A+LG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIASLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18411.1| (AB044485) photosystem II CP43 apoprotein [Eudorina elegans]
Length = 260
Score = 477 bits (1215), Expect = e-133
Identities = 215/260 (82%), Positives = 243/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRIITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTG+
Sbjct: 241 ASAQGPTGLGKYLMRSPTGK 260
>dbj|BAB18455.1| (AB044529) photosystem II CP43 apoprotein [Vitreochlamys ordinata]
Length = 260
Score = 477 bits (1214), Expect = e-133
Identities = 216/260 (83%), Positives = 241/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+A+LG+GVGPGGEVIDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFG
Sbjct: 1 LPHIASLGYGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIMLGLGAWLLVLKALYFGGVYDTWAPGGGDVRIITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD+LEDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNLEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSL A++ GFIACCF WFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLGAIATMGFIACCFSWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18446.1| (AB044520) photosystem II CP43 apoprotein [Gonium octonarium]
Length = 260
Score = 477 bits (1214), Expect = e-133
Identities = 213/260 (81%), Positives = 242/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE++DTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIVDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGD+R ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDIRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSL A+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLGAISMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18427.1| (AB044501) photosystem II CP43 apoprotein [Volvulina steinii]
Length = 260
Score = 477 bits (1214), Expect = e-133
Identities = 216/260 (83%), Positives = 241/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGEVIDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYLLKSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLLKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSL A++ GFIACC WFN+TAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLGAIATMGFIACCMSWFNDTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18421.1| (AB044495) photosystem II CP43 apoprotein [Yamagishiella unicocca]
Length = 260
Score = 476 bits (1213), Expect = e-133
Identities = 214/260 (82%), Positives = 243/260 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+A+LG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIASLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+++ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAIAMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18454.1| (AB044528) photosystem II CP43 apoprotein [Chlamydomonas
reinhardtii]
Length = 260
Score = 476 bits (1212), Expect = e-133
Identities = 214/260 (82%), Positives = 241/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIMLGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSL A+ V GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLGAIGVMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18401.1| (AB044475) photosystem II CP43 apoprotein [Volvox carteri f.
kawasakiensis]
Length = 260
Score = 476 bits (1212), Expect = e-133
Identities = 214/260 (82%), Positives = 242/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSA LGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAGLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGD+R ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDIRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18435.1| (AB044509) photosystem II CP43 apoprotein [Pandorina morum]
Length = 260
Score = 476 bits (1211), Expect = e-133
Identities = 215/260 (82%), Positives = 242/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+A LG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFG
Sbjct: 1 LPHIAPLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGGIYDTWAPGGGDVR ITN T S ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGIYDTWAPGGGDVRIITNPTTSAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+++ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAIAMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18426.1| (AB044500) photosystem II CP43 apoprotein [Volvulina steinii]
Length = 260
Score = 476 bits (1211), Expect = e-133
Identities = 215/260 (82%), Positives = 240/260 (91%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPHLATLG+GVGPGGEVIDT+PYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFG
Sbjct: 1 LPHLATLGYGVGPGGEVIDTYPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T S ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRLITNPTTSAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GW SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWFCSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSL A++ GFIACC WFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLGAIATMGFIACCISWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18456.1| (AB044530) photosystem II CP43 apoprotein [Lobomonas monstruosa]
Length = 260
Score = 475 bits (1210), Expect = e-133
Identities = 213/260 (81%), Positives = 243/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+A+LG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFG
Sbjct: 1 LPHIASLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIMLGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAISMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
S+QGPTGLGKYLMRSPTGE
Sbjct: 241 ASSQGPTGLGKYLMRSPTGE 260
>dbj|BAB18451.1| (AB044525) photosystem II CP43 apoprotein [Tetrabaena socialis]
dbj|BAB18452.1| (AB044526) photosystem II CP43 apoprotein [Basichlamys sacculifera]
Length = 260
Score = 475 bits (1210), Expect = e-133
Identities = 214/260 (82%), Positives = 242/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+A+LG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YHAL+GPETLEES+PFFG
Sbjct: 1 LPHIASLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHALIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGD+R ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDIRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLGKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA++V GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAIAVMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18423.1| (AB044497) photosystem II CP43 apoprotein [Yamagishiella unicocca]
Length = 260
Score = 475 bits (1209), Expect = e-133
Identities = 214/260 (82%), Positives = 241/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+A LG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIAPLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKALYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA++ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAIATMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18422.1| (AB044496) photosystem II CP43 apoprotein [Yamagishiella unicocca]
Length = 260
Score = 474 bits (1207), Expect = e-132
Identities = 213/260 (81%), Positives = 242/260 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+A+LG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIASLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR IT T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITKPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
EAYLSYSLAA+++ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 181 EAYLSYSLAAIAMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANV 240
Query: 329 GSAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 241 ASAQGPTGLGKYLMRSPTGE 260
>dbj|BAB18433.1| (AB044507) photosystem II CP43 apoprotein [Pandorina morum]
Length = 249
Score = 455 bits (1158), Expect = e-127
Identities = 204/248 (82%), Positives = 231/248 (92%)
Query: 101 PGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRNKMTTI 160
PGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFGYVWKD+NKMT I
Sbjct: 2 PGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFGYVWKDKNKMTNI 61
Query: 161 LGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSIIFGYLLKSPFGG 220
LG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGD+R ITN T + ++IFGYL+KSPFGG
Sbjct: 62 LGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDIRVITNPTTNAAVIFGYLVKSPFGG 121
Query: 221 EGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALS 280
+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSGEAYLSYSLAA+S
Sbjct: 122 DGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSGEAYLSYSLAAIS 181
Query: 281 VFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKY 340
+ GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV SAQGPTGLGKY
Sbjct: 182 MMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANVASAQGPTGLGKY 241
Query: 341 LMRSPTGE 348
LMRSPTGE
Sbjct: 242 LMRSPTGE 249
>dbj|BAB18436.1| (AB044510) photosystem II CP43 apoprotein [Pandorina morum]
Length = 218
Score = 398 bits (1012), Expect = e-110
Identities = 175/218 (80%), Positives = 202/218 (92%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEES+PFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESYPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG 268
IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSG 180
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTG 306
EAYLSYSLAA+S+ GFIACC WFNNTAYPSEFYGPTG
Sbjct: 181 EAYLSYSLAAISMMGFIACCMSWFNNTAYPSEFYGPTG 218
>emb|CAC13147.1| (AJ296146) putative chl a/b-binding protein [Fischerella muscicola]
Length = 324
Score = 321 bits (813), Expect = 2e-86
Identities = 163/279 (58%), Positives = 196/279 (69%), Gaps = 9/279 (3%)
Query: 31 TGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLP 90
T W GNARLI+LSG+LLGAH+AHAGLI+FWAG++ + EV FVP PMYEQ + LLP
Sbjct: 13 TNSPWLIGNARLIDLSGQLLGAHIAHAGLIMFWAGSITISEVTRFVPGIPMYEQQMTLLP 72
Query: 91 HLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEES---FPFF 147
HLATLGWGVG GGEVI+T+PYFV G+LHL++SAVLG GG++H P L S F
Sbjct: 73 HLATLGWGVGAGGEVINTYPYFVIGILHLVASAVLGAGGLFHVFRSPAILYNSGGQVAKF 132
Query: 148 GYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPS 207
Y W D K+ ILG HLI+LG GAFLLV KA +FGGIYDT +VR ITN T P
Sbjct: 133 HYEWNDPKKLGLILGHHLIILGFGAFLLVLKAMFFGGIYDTHIE---NVRLITNPTFDPM 189
Query: 208 IIFGYL--LKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL- 264
IF YL +K I SVD+LED+IGGH+W+GSI ILGGIWHIL PFAW R+ L
Sbjct: 190 TIFSYLVGIKDSHWTLLGIASVDNLEDVIGGHIWIGSILILGGIWHILVPPFAWVRQILP 249
Query: 265 VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
+ +GE LSYSL L++ FI+ FV +N+T +P EFYG
Sbjct: 250 IVNGEEILSYSLLGLALMAFISAVFVGYNDTVFPKEFYG 288
>emb|CAC08491.1| (AJ295840) CP 43' protein [Fischerella muscicola]
Length = 345
Score = 303 bits (767), Expect = 4e-81
Identities = 149/281 (53%), Positives = 189/281 (67%), Gaps = 14/281 (4%)
Query: 27 DQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGL 86
D + WWAGNAR NLSG +GAHVA A L WAGA FE++ + PM EQGL
Sbjct: 5 DNPKVKYDWWAGNARFANLSGLFIGAHVAQAALTTLWAGAFTWFELSRYQSGVPMGEQGL 64
Query: 87 ILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEES--- 143
ILLPHLATLG+GVG GG+++DT+PYFV G LH+ISSAVLG G + H GPE L+++
Sbjct: 65 ILLPHLATLGFGVGAGGQIVDTYPYFVIGALHIISSAVLGAGALLHTFKGPENLKDATGP 124
Query: 144 FPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLT 203
F + W D NK+ ILG HL+ LG GA LLV KA ++GG+YDT DVR +T T
Sbjct: 125 AREFHFEWDDANKLGLILGHHLLFLGAGALLLVAKAMFWGGLYDTTI---HDVRVVTEPT 181
Query: 204 LSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRA 263
L+P IIFGY + SVD+LED++GGH+++G + I GG+WHIL KP AWA++
Sbjct: 182 LNPFIIFGY--------QTHFASVDNLEDVVGGHIYVGLLLIFGGVWHILVKPLAWAKKL 233
Query: 264 LVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGP 304
L++SGEA LSYSL +++ GF+A F N AYP EFYGP
Sbjct: 234 LIFSGEAILSYSLGGIALAGFVAAYFCAVNTLAYPVEFYGP 274
Score = 44.9 bits (104), Expect = 0.002
Identities = 20/31 (64%), Positives = 22/31 (70%), Gaps = 1/31 (3%)
Query: 418 NYVSPRSWLATSHFVLGFFLFVGHLWHAGRA 448
NY S R+WLA +HF L FF GHLWHA RA
Sbjct: 297 NYTS-RAWLANTHFFLAFFFLQGHLWHALRA 326
>sp|P31157|ISIA_SYNP2 IRON-STRESS INDUCED CHLOROPHYLL-BINDING PROTEIN
pir||A47673 photosystem II chlorophyll-binding protein CP-43 homolog IsiA -
Synechococcus sp. (PCC 7002)
gb|AAA27317.1| (M88253) isiA [Synechococcus sp.]
Length = 342
Score = 300 bits (759), Expect = 3e-80
Identities = 150/281 (53%), Positives = 193/281 (68%), Gaps = 15/281 (5%)
Query: 27 DQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGL 86
D + WWAGNAR +LSG+ +GAHVAHA LIVFWAGA LFE+++F P PM EQ L
Sbjct: 5 DNPDVKYEWWAGNARFADLSGQFIGAHVAHAALIVFWAGAFTLFEISYFDPTLPMGEQNL 64
Query: 87 ILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFP- 145
ILLPHLATLG G+ G I+T PYFV G +HLISSAVL GG++H L GP+ L+ +
Sbjct: 65 ILLPHLATLGLGI-EGNGAINTEPYFVIGAIHLISSAVLAAGGLFHVLRGPQDLKTATGP 123
Query: 146 --FFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLT 203
F + W+D ++ ILG HL+LLG+GAFLLV KA YFGG+YDT VR +T T
Sbjct: 124 ARRFHFDWEDPKQLGLILGHHLLLLGLGAFLLVAKAMYFGGLYDTATQ---TVRLVTEPT 180
Query: 204 LSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRA 263
L P++I+GY + +VD+LEDI+GGH+++G + + GGIWHIL P WA++
Sbjct: 181 LDPAVIYGY--------QTHFATVDNLEDIVGGHIYVGVLLVAGGIWHILVPPLQWAKKV 232
Query: 264 LVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGP 304
L++SGEA LSYSL A+++ GF+A F N TAYP EFYGP
Sbjct: 233 LLFSGEAILSYSLGAIALAGFVAAYFCAVNTTAYPVEFYGP 273
Score = 42.2 bits (97), Expect = 0.014
Identities = 17/32 (53%), Positives = 21/32 (65%)
Query: 417 VNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA 448
+N + R+WLA +HF FF GHLWHA RA
Sbjct: 293 MNEHTSRAWLANAHFFFAFFFLQGHLWHALRA 324
>emb|CAA65756.1| (X97043) chlorophyll a /b antenna, 38 kDa protein [Prochlorothrix
hollandica]
Length = 375
Score = 294 bits (744), Expect = 2e-78
Identities = 152/297 (51%), Positives = 200/297 (67%), Gaps = 15/297 (5%)
Query: 27 DQETTGFA----WWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY 82
+ E GF+ WWAGN RL++LSG+LLGAH+AHAGLI FWAG++ + EVA +VP+ P Y
Sbjct: 14 NNEPAGFSLDEQWWAGNIRLVDLSGQLLGAHIAHAGLIAFWAGSITVLEVARYVPDVPFY 73
Query: 83 EQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEE 142
EQGL LLPHLATLG+G+GP G V+DT+PYFV G+LHL++SAVLG GG++H GP L E
Sbjct: 74 EQGLGLLPHLATLGFGIGPDGTVVDTYPYFVIGILHLVTSAVLGAGGLFHTFKGPAILAE 133
Query: 143 S---FPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKI 199
P F Y W D +++ ILG HL+LLGI V KA ++GG+YD G V +
Sbjct: 134 GGALAPKFHYDWGDTKQLSLILGHHLLLLGILCLAFVAKAMFWGGVYDA---SLGTVHTV 190
Query: 200 TNLTLSPSIIFGYLL---KSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+ L+P+ IFGY+ F G G + SVD+L DIIGGHV++G + ++GG WHILTKP
Sbjct: 191 SP-NLNPADIFGYVFGFNHGQFNGLG-MSSVDNLPDIIGGHVYIGILELIGGTWHILTKP 248
Query: 257 FAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQ 313
FA + +SGEA LSYSL A+ G ++ FV + + AYP +FYGP A+ Q
Sbjct: 249 FAIGAKPFSFSGEAILSYSLGAVGWMGLLSGFFVRYCDAAYPPQFYGPERSGAAAVQ 305
Score = 38.3 bits (87), Expect = 0.21
Identities = 17/32 (53%), Positives = 20/32 (62%)
Query: 419 YVSPRSWLATSHFVLGFFLFVGHLWHAGRARA 450
Y RS A ++LG L VGH+WHA RARA
Sbjct: 294 YGPERSGAAAVQYILGVLLLVGHVWHATRARA 325
>emb|CAA96551.1| (Z72476) chlorophyll-binding protein [Prochloron didemni]
Length = 321
Score = 286 bits (724), Expect = 4e-76
Identities = 144/275 (52%), Positives = 186/275 (67%), Gaps = 15/275 (5%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+ WWAGN+RL SGK L AHVA A LIVFWAGA+ LFEVA + + P+ EQ LIL+PH+
Sbjct: 11 YGWWAGNSRLAGFSGKWLAAHVAQAALIVFWAGAICLFEVARYTADVPLGEQNLILIPHM 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEES---FPFFGY 149
A+LG G+G GG+++DTFPYF GV+HL+SSAV+G GG+YH+L GP L+E P F +
Sbjct: 71 ASLGLGIGEGGQIVDTFPYFAVGVVHLVSSAVIGAGGLYHSLRGPAILKEGPARAPKFDF 130
Query: 150 VWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSII 209
W D ++ ILG HLILLG+GA LV A +F GIYD P G+VR +T+ TL+P I
Sbjct: 131 DWGDGKRLGFILGHHLILLGLGALFLVLWAVFF-GIYD---PVIGEVRTVTSPTLNPFTI 186
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGE 269
FGY + V + LED+IGGHV++ I I GGIWHI PF A+R +++SGE
Sbjct: 187 FGY--------QTHFVETNTLEDLIGGHVYVAIIEISGGIWHIFCPPFKLAQRLIIYSGE 238
Query: 270 AYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGP 304
L+Y+L L++ GF A + FN AYP EFYGP
Sbjct: 239 GLLAYALGGLAIMGFTAAVYCAFNTLAYPGEFYGP 273
Score = 39.1 bits (89), Expect = 0.12
Identities = 14/29 (48%), Positives = 18/29 (61%)
Query: 417 VNYVSPRSWLATSHFVLGFFLFVGHLWHA 445
+ + R+WL HF L FF+ GHLWHA
Sbjct: 293 IGQYTARAWLCNVHFFLAFFVLQGHLWHA 321
>sp|Q55274|ISIA_SYNY3 IRON-STRESS INDUCED CHLOROPHYLL-BINDING PROTEIN
pir||S75086 iron-stress chlorophyll-binding protein - Synechocystis sp.
(strain PCC 6803)
dbj|BAA17948.1| (D90910) iron-stress chlorophyll-binding protein [Synechocystis
sp.]
Length = 342
Score = 284 bits (718), Expect = 2e-75
Identities = 137/279 (49%), Positives = 182/279 (65%), Gaps = 14/279 (5%)
Query: 29 ETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLIL 88
+T + WWAGNAR + SG + AHVA A L FWAGA LFE++ F P + M +QGLIL
Sbjct: 7 DTVQYEWWAGNARFADQSGLFIAAHVAQAALTAFWAGAFTLFEISRFDPTQAMGDQGLIL 66
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGP---ETLEESFP 145
LPHLATLGWGVG GG+++DT+PYFV G +HLI+SAVLG G ++H L P TL+
Sbjct: 67 LPHLATLGWGVGDGGQIVDTYPYFVIGSIHLIASAVLGAGALFHTLRAPADLSTLKGQGK 126
Query: 146 FFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLS 205
F + W++ ++ ILG HL+ LG GA LL KA Y+GG+YD VR ++ TL
Sbjct: 127 KFHFTWENPQQLGIILGHHLLFLGAGALLLAGKAMYWGGLYDATTQ---TVRLVSQPTLD 183
Query: 206 PSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALV 265
P +I+GY + S+ LED++GGH+++G + I GGIWHIL P WA++ L+
Sbjct: 184 PLVIYGY--------QTHFASISSLEDLVGGHIFVGFLLIGGGIWHILVPPLGWAKKVLL 235
Query: 266 WSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGP 304
+SGEA LSYSL +++ GF+A F N AYP EFYGP
Sbjct: 236 FSGEAILSYSLGGIALAGFVAAYFCAVNTLAYPPEFYGP 274
Score = 43.4 bits (100), Expect = 0.006
Identities = 21/43 (48%), Positives = 28/43 (64%), Gaps = 5/43 (11%)
Query: 423 RSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFE-KGIDRDFE 464
R+WLA +HF L FF GHLWHA R A GF+ K +++ F+
Sbjct: 300 RAWLANAHFFLAFFFLQGHLWHALR----ALGFDFKRVEQAFD 338
>gb|AAA27291.1| (L26530) iron-stress chlorophyll-binding protein [Synechocystis
sp.]
Length = 344
Score = 283 bits (717), Expect = 3e-75
Identities = 137/279 (49%), Positives = 182/279 (65%), Gaps = 14/279 (5%)
Query: 29 ETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLIL 88
+T + WWAGNAR + SG + AHVA A L FWAGA LFE++ F P + M +QGLIL
Sbjct: 7 DTVQYEWWAGNARFADQSGLFIAAHVAQAALTAFWAGAFTLFEISRFDPTQAMGDQGLIL 66
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGP---ETLEESFP 145
LPHLATLGWGVG GG+++DT+PYFV G +HLI+SAVLG G ++H L P TL+
Sbjct: 67 LPHLATLGWGVGDGGQIVDTYPYFVIGRIHLIASAVLGAGALFHTLRAPADLSTLKGQGK 126
Query: 146 FFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLS 205
F + W++ ++ ILG HL+ LG GA LL KA Y+GG+YD VR ++ TL
Sbjct: 127 KFHFTWENPQQLGIILGHHLLFLGAGALLLAGKAMYWGGLYDATTQ---TVRLVSQPTLD 183
Query: 206 PSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALV 265
P +I+GY + S+ LED++GGH+++G + I GGIWHIL P WA++ L+
Sbjct: 184 PLVIYGY--------QTHFASISSLEDLVGGHIFVGFLLIGGGIWHILVPPLGWAKKVLL 235
Query: 266 WSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGP 304
+SGEA LSYSL +++ GF+A F N AYP EFYGP
Sbjct: 236 FSGEAILSYSLGGIALAGFVAAYFCAVNTLAYPPEFYGP 274
Score = 43.0 bits (99), Expect = 0.008
Identities = 17/26 (65%), Positives = 19/26 (72%)
Query: 423 RSWLATSHFVLGFFLFVGHLWHAGRA 448
R+WLA +HF L FF GHLWHA RA
Sbjct: 300 RAWLANAHFFLAFFFLQGHLWHALRA 325
>pir||S42648 photosystem II chlorophyll a-binding protein isiA - Anabaena sp.
(strain PCC 7120)
Length = 344
Score = 281 bits (712), Expect = 1e-74
Identities = 140/280 (50%), Positives = 184/280 (65%), Gaps = 14/280 (5%)
Query: 27 DQETTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGL 86
D + WWAGNAR NLSG +GAHVA A L WAGA FE++ + PE PM EQGL
Sbjct: 5 DNPNIKYDWWAGNARFANLSGLFIGAHVAQAALTTLWAGAFTWFEISRYKPEIPMGEQGL 64
Query: 87 ILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEE---S 143
ILLPHLATLG+GVG G+V++T+PYFV G LHLISSAVLG G ++H GP L+ S
Sbjct: 65 ILLPHLATLGFGVGVSGQVVNTYPYFVIGALHLISSAVLGAGALFHTFKGPRNLKNTTGS 124
Query: 144 FPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLT 203
F + W D ++ ILG HL+ LG+ A LLV KA ++GG+YD VR + + T
Sbjct: 125 ARKFHFEWNDPKQLGLILGHHLLFLGMAALLLVGKAMFWGGLYDATTQ---VVRVVNHPT 181
Query: 204 LSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRA 263
L+P +I+GY + SV++LED++GGH+++G I I GGIWHI+ +P WA++
Sbjct: 182 LNPFVIYGY--------QTHFASVNNLEDLVGGHIYVGLILIGGGIWHIVKEPLPWAKKL 233
Query: 264 LVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
L++SGEA LSYSL +++ GF+A F N AYP EFYG
Sbjct: 234 LIFSGEAILSYSLGGIALAGFVAAYFCAVNTLAYPVEFYG 273
Score = 44.1 bits (102), Expect = 0.004
Identities = 18/28 (64%), Positives = 20/28 (71%)
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRA 448
S R+WLA +HF L FF GHLWHA RA
Sbjct: 298 SARAWLANAHFFLAFFFLQGHLWHALRA 325
>sp|P15347|ISIA_SYNP7 IRON-STRESS INDUCED CHLOROPHYLL-BINDING PROTEIN
gb|AAC64212.1| (M23639) iron-stress-induced [Synechococcus sp. PCC 7942]
Length = 342
Score = 279 bits (706), Expect = 6e-74
Identities = 137/274 (50%), Positives = 181/274 (66%), Gaps = 14/274 (5%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+ WWAGNAR NLSG + AHVA A LI+FWAGA L+E++ ++ M EQGLILLPHL
Sbjct: 11 YDWWAGNARFANLSGLFIAAHVAQAALIMFWAGAFTLYEISWLTADQSMGEQGLILLPHL 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETL---EESFPFFGY 149
ATLG GVG GG+V DT+P FV G +HLI+SAVLG G ++H P L + F +
Sbjct: 71 ATLGLGVGDGGQVTDTYPLFVVGAVHLIASAVLGAGALFHTFRAPSDLAAASGAAKRFHF 130
Query: 150 VWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSII 209
W D ++ ILG HL+ LG+GA LLV KA+ +GG+YD VR +T TL+P++I
Sbjct: 131 DWNDPKQLGLILGHHLLFLGVGALLLVAKATTWGGLYDA---ASQTVRLVTQPTLNPAVI 187
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGE 269
+GY + S+D+LED++GGHV++G + I GGIWHIL PF W ++ L++SGE
Sbjct: 188 YGY--------QTHFASIDNLEDLVGGHVYVGVMLIAGGIWHILVPPFQWTKKVLIYSGE 239
Query: 270 AYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
A LSYSL +++ GF+A F N AYP EFYG
Sbjct: 240 AILSYSLGGIALAGFVAAYFCAVNTLAYPVEFYG 273
Score = 44.5 bits (103), Expect = 0.003
Identities = 17/28 (60%), Positives = 21/28 (74%)
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRA 448
+PR+WL+ +HF L FF GHLWHA RA
Sbjct: 298 TPRAWLSNAHFFLAFFCLQGHLWHALRA 325
>pir||A30189 iron stress-induced hypothetical protein precursor - Synechococcus
sp
Length = 342
Score = 279 bits (706), Expect = 6e-74
Identities = 137/274 (50%), Positives = 181/274 (66%), Gaps = 14/274 (5%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+ WWAGNAR NLSG + AHVA A LI+FWAGA L+E++ ++ M EQGLILLPHL
Sbjct: 11 YDWWAGNARFANLSGLFIAAHVAQAALIMFWAGAFTLYEISWLTADQSMGEQGLILLPHL 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETL---EESFPFFGY 149
ATLG GVG GG+V DT+P FV G +HLI+SAVLG G ++H P L + F +
Sbjct: 71 ATLGLGVGDGGQVTDTYPLFVVGAVHLIASAVLGAGALFHTFRAPSDLAAASGAAKRFHF 130
Query: 150 VWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSII 209
W D ++ ILG HL+ LG+GA LLV KA+ +GG+YD VR +T TL+P++I
Sbjct: 131 DWNDPKQLGLILGHHLLFLGVGALLLVAKATTWGGLYDA---ASQTVRLVTEPTLNPAVI 187
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGE 269
+GY + S+D+LED++GGHV++G + I GGIWHIL PF W ++ L++SGE
Sbjct: 188 YGY--------QTHFASIDNLEDLVGGHVYVGVMLIAGGIWHILVPPFQWTKKVLIYSGE 239
Query: 270 AYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
A LSYSL +++ GF+A F N AYP EFYG
Sbjct: 240 AILSYSLGGIALAGFVAAYFCAVNTLAYPVEFYG 273
Score = 44.5 bits (103), Expect = 0.003
Identities = 17/28 (60%), Positives = 21/28 (74%)
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRA 448
+PR+WL+ +HF L FF GHLWHA RA
Sbjct: 298 TPRAWLSNAHFFLAFFCLQGHLWHALRA 325
>dbj|BAB18440.1| (AB044514) photosystem II CP43 apoprotein [Astrephomene
gubernaculifera]
Length = 155
Score = 279 bits (705), Expect = 7e-74
Identities = 127/155 (81%), Positives = 140/155 (89%)
Query: 194 GDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHIL 253
GDVR ITN T + ++IFGYLLKSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI
Sbjct: 1 GDVRIITNPTTNAAVIFGYLLKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIY 60
Query: 254 TKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQ 313
T P+ WARRA VWSGEAYLSYSL A+SV GFIACC WFNNTAYPSEFYGPTGPEASQ+Q
Sbjct: 61 TTPWPWARRAFVWSGEAYLSYSLGAISVMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQ 120
Query: 314 AFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE 348
AFTFLVRDQRLGANV SAQGPTGLGKYLMRSPTGE
Sbjct: 121 AFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGE 155
>dbj|BAB18416.1| (AB044490) photosystem II CP43 apoprotein [Eudorina unicocca]
dbj|BAB18418.1| (AB044492) photosystem II CP43 apoprotein [Eudorina unicocca]
Length = 155
Score = 277 bits (700), Expect = 3e-73
Identities = 124/155 (80%), Positives = 141/155 (90%)
Query: 194 GDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHIL 253
GD+R ITN T + ++IFGYL+KSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI
Sbjct: 1 GDIRVITNPTTNAAVIFGYLVKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIY 60
Query: 254 TKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQ 313
T P+ WARRA VWSGEAYLSYSLAA+++ GFIACC WFNNTAYPSEFYGPTGPEASQ+Q
Sbjct: 61 TTPWPWARRAFVWSGEAYLSYSLAAIAMMGFIACCMSWFNNTAYPSEFYGPTGPEASQSQ 120
Query: 314 AFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE 348
AFTFLVRDQRLGANV SAQGPTGLGKYLMRSPTGE
Sbjct: 121 AFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGE 155
>dbj|BAB18429.1| (AB044503) photosystem II CP43 apoprotein [Volvulina steinii]
Length = 155
Score = 275 bits (697), Expect = 6e-73
Identities = 125/155 (80%), Positives = 139/155 (89%)
Query: 194 GDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHIL 253
GDVR ITN T + ++IFGYLLKSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI
Sbjct: 1 GDVRVITNPTTNAAVIFGYLLKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIY 60
Query: 254 TKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQ 313
T P+ WARRA VWSGEAYLSYSL A++ GFIACC WFN+TAYPSEFYGPTGPEASQAQ
Sbjct: 61 TTPWPWARRAFVWSGEAYLSYSLGAIATMGFIACCMSWFNDTAYPSEFYGPTGPEASQAQ 120
Query: 314 AFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE 348
AFTFLVRDQRLGANV SAQGPTGLGKYLMRSPTGE
Sbjct: 121 AFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGE 155
>dbj|BAB18441.1| (AB044515) photosystem II CP43 apoprotein [Astrephomene
gubernaculifera]
Length = 148
Score = 272 bits (689), Expect = 5e-72
Identities = 121/148 (81%), Positives = 140/148 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGD+R ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDIRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGG 236
IFGYLLKSPFGG+GWI SVD++EDIIGG
Sbjct: 121 IFGYLLKSPFGGDGWICSVDNMEDIIGG 148
>dbj|BAB18458.1| (AB044532) photosystem II CP43 apoprotein [Paulschulzia
pseudovolvox]
Length = 155
Score = 272 bits (687), Expect = 9e-72
Identities = 120/155 (77%), Positives = 138/155 (88%)
Query: 194 GDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHIL 253
GDVR I+N T + +IF YL+KSPFGG+GW+ SVD++EDIIGGH+W+G++ +LGGIWHI
Sbjct: 1 GDVRIISNPTTNAGVIFSYLVKSPFGGDGWVCSVDNMEDIIGGHIWIGTLLLLGGIWHIY 60
Query: 254 TKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQ 313
T P+ WARRA VWSGEAYLSYSL A++V GFIACC WFNNTAYPSEFYGPTGPEASQ+Q
Sbjct: 61 TTPWPWARRAFVWSGEAYLSYSLGAIAVMGFIACCISWFNNTAYPSEFYGPTGPEASQSQ 120
Query: 314 AFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE 348
AFTFLVRDQRLGAN+ SAQGPTGLGKYLMRSPTGE
Sbjct: 121 AFTFLVRDQRLGANIASAQGPTGLGKYLMRSPTGE 155
>dbj|BAB18448.1| (AB044522) photosystem II CP43 apoprotein [Gonium quadratum]
Length = 148
Score = 272 bits (687), Expect = 9e-72
Identities = 121/148 (81%), Positives = 140/148 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGDVR ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDVRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGG 236
IFGYL+KSPFGG+GWI SVD++EDIIGG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGG 148
>dbj|BAB18413.1| (AB044487) photosystem II CP43 apoprotein [Eudorina elegans]
Length = 148
Score = 271 bits (686), Expect = 1e-71
Identities = 120/148 (81%), Positives = 140/148 (94%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGGGD+R ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGGGDIRVITNPTTNAAV 120
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGG 236
IFGYL+KSPFGG+GWI SVD++EDIIGG
Sbjct: 121 IFGYLVKSPFGGDGWICSVDNMEDIIGG 148
>dbj|BAB18445.1| (AB044519) photosystem II CP43 apoprotein [Astrephomene perforata]
Length = 139
Score = 262 bits (663), Expect = 6e-69
Identities = 118/139 (84%), Positives = 128/139 (91%)
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGE 269
FGYLLKSPFGG+GWI SVD++EDIIGGH+W+G++ ILGGIWHI T P+ WARRA VWSGE
Sbjct: 1 FGYLLKSPFGGDGWICSVDNMEDIIGGHIWIGTLEILGGIWHIYTTPWPWARRAFVWSGE 60
Query: 270 AYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANVG 329
AYLSYSL A+SV GFIACC WFNNTAYPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV
Sbjct: 61 AYLSYSLGAISVMGFIACCISWFNNTAYPSEFYGPTGPEASQSQAFTFLVRDQRLGANVA 120
Query: 330 SAQGPTGLGKYLMRSPTGE 348
SAQGPTGLGKYLMRSPTGE
Sbjct: 121 SAQGPTGLGKYLMRSPTGE 139
>emb|CAA65757.1| (X97043) chlorophyll a /b antenna, 32 kDa protein [Prochlorothrix
hollandica]
Length = 350
Score = 250 bits (633), Expect = 2e-65
Identities = 137/288 (47%), Positives = 176/288 (60%), Gaps = 26/288 (9%)
Query: 30 TTGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILL 89
T + WWAGN+R SGK L AH+A LI FWAG + LFE+A + P+ M EQGLIL+
Sbjct: 6 TPEYGWWAGNSRFALQSGKWLSAHIAQYALITFWAGGITLFELARYNPDVSMGEQGLILI 65
Query: 90 PHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEES-FPF-- 146
PHLATLGWG+G GG+V+DT+PYFV GV+HL++SAV G G +YHAL GPE L +S F F
Sbjct: 66 PHLATLGWGIGSGGQVVDTYPYFVIGVIHLVASAVFGAGALYHALKGPEDLSQSDFEFAK 125
Query: 147 -FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLS 205
F + W D K+ ILG HL+ LG A L V F G+YD+ G+VR +TN +
Sbjct: 126 NFHFEWDDAAKLGNILGHHLLTLGYAALLFVIWLR-FHGVYDSTI---GEVRVVTNPGAT 181
Query: 206 -PSIIFGYLLKSPFGGEGWIVS------VDDLEDIIGGHVWLGSICILGGIWHILTKPFA 258
S++F Y GW V++LED+ GH ++ + + GG WHI PF
Sbjct: 182 ILSVLFEY---------GWFTPDHNPYFVNNLEDLASGHAYIAVVLLAGGFWHINQAPFP 232
Query: 259 WARRAL--VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGP 304
WA+R L ++S E LS SLA LS+ GF A F N AYP EF+GP
Sbjct: 233 WAQRLLASLFSPEGLLSASLAGLSMAGFAAAYFSAVNTLAYPVEFFGP 280
Score = 40.6 bits (93), Expect = 0.042
Identities = 16/26 (61%), Positives = 18/26 (68%)
Query: 423 RSWLATSHFVLGFFLFVGHLWHAGRA 448
R+WL HF L FF+ GHLWHA RA
Sbjct: 306 RAWLCNVHFFLAFFVLQGHLWHALRA 331
>emb|CAA65758.1| (X97043) pcbB [Prochlorothrix hollandica]
Length = 347
Score = 244 bits (616), Expect = 2e-63
Identities = 141/310 (45%), Positives = 182/310 (58%), Gaps = 25/310 (8%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+ WWAGN+R + +G L AHVA A IV WAGA+ LFEVA + P PM EQGLIL+PHL
Sbjct: 11 YGWWAGNSRFADRTGLWLAAHVAQASFIVLWAGAITLFEVARYTPSIPMGEQGLILIPHL 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETL-EESFPFFGYVW 151
A LG GVG GG V++TFPY G +HLISS V FG I+H GPE++ E S F + W
Sbjct: 71 AALGIGVGAGGVVVNTFPYTAIGAVHLISSFVFAFGAIFHVRFGPESIGEGSDSKFAFSW 130
Query: 152 KDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLS-PSIIF 210
D ++ ILG HL+LLG+GA V F G+YD+ GDVR ++N + S+IF
Sbjct: 131 DDPKQLGLILGHHLLLLGLGAIFFVGWIR-FHGVYDSTI---GDVRIVSNPGATILSVIF 186
Query: 211 GYLLKSPFGGEGWIVS------VDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
Y GW V++LED+ GH ++G + + GG+WHI +PFAWA+R L
Sbjct: 187 EY---------GWFTPEHNPFFVNNLEDLASGHAFIGVVLLSGGVWHITQEPFAWAQRLL 237
Query: 265 --VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQ 322
++S E LS +LA LS+ GF A F N AYP EF+GP P Q + V
Sbjct: 238 ASLFSAEGLLSSALAGLSMLGFAAAYFSAVNTLAYPIEFFGP--PLELQFNIMPYFVDSV 295
Query: 323 RLGANVGSAQ 332
L A V SA+
Sbjct: 296 DLPAGVYSAR 305
Score = 41.8 bits (96), Expect = 0.019
Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRA 448
S R+WL HF L FF+ GHLWHA RA
Sbjct: 303 SARAWLCNVHFYLAFFVLQGHLWHAIRA 330
>dbj|BAB18444.1| (AB044518) photosystem II CP43 apoprotein [Astrephomene perforata]
Length = 120
Score = 220 bits (555), Expect = 3e-56
Identities = 98/120 (81%), Positives = 113/120 (93%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+G+GPGGEVIDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGIGPGGEVIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGGIYDTWAPGGGD+R ITN T + ++
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGIYDTWAPGGGDIRVITNPTTNAAV 120
>prf||1010249B URF 1 [Euglena gracilis]
Length = 132
Score = 212 bits (534), Expect = 8e-54
Identities = 97/124 (78%), Positives = 106/124 (85%)
Query: 350 IFGGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGG 409
IFG T+ FWD R PWLEPLRGPNGLDL++LK D+QPWQERR+AEYMTHAPLGSLNSVGG
Sbjct: 9 IFGKTTLCFWDFRGPWLEPLRGPNGLDLNKLKNDVQPWQERRAAEYMTHAPLGSLNSVGG 68
Query: 410 VATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPVLSM 469
VATEINAVN+V+PRSW TSHFVL FF FVGHLWHAGRARAAA GFEKGIDR E +
Sbjct: 69 VATEINAVNFVNPRSWALTSHFVLAFFFFVGHLWHAGRARAAAIGFEKGIDRSREIARKL 128
Query: 470 TPLN 473
PL+
Sbjct: 129 KPLD 132
>dbj|BAB18414.1| (AB044488) photosystem II CP43 apoprotein [Eudorina elegans]
dbj|BAB18449.1| (AB044523) photosystem II CP43 apoprotein [Gonium quadratum]
Length = 112
Score = 211 bits (532), Expect = 1e-53
Identities = 95/112 (84%), Positives = 102/112 (90%)
Query: 237 HVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTA 296
H+W+G++ ILGGIWHI T P+ WARRA VWSGEAYLSYSL A+SV GFIACC WFNNTA
Sbjct: 1 HIWIGTLEILGGIWHIYTTPWPWARRAFVWSGEAYLSYSLGAISVMGFIACCMSWFNNTA 60
Query: 297 YPSEFYGPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE 348
YPSEFYGPTGPEASQ+QAFTFLVRDQRLGANV SAQGPTGLGKYLMRSPTGE
Sbjct: 61 YPSEFYGPTGPEASQSQAFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGE 112
>dbj|BAB18457.1| (AB044531) photosystem II CP43 apoprotein [Paulschulzia
pseudovolvox]
Length = 105
Score = 207 bits (522), Expect = 2e-52
Identities = 92/105 (87%), Positives = 102/105 (96%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGEVIDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGG 193
YVWKD+NKMT ILG HLI+LG+GA+LLVFKA YFGG+YDTWAPGG
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVFKAMYFGGVYDTWAPGG 105
>dbj|BAB18428.1| (AB044502) photosystem II CP43 apoprotein [Volvulina steinii]
Length = 105
Score = 205 bits (517), Expect = 8e-52
Identities = 91/105 (86%), Positives = 102/105 (96%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGEVIDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGG 193
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGG
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGG 105
>dbj|BAB18439.1| (AB044513) photosystem II CP43 apoprotein [Astrephomene
gubernaculifera]
Length = 105
Score = 205 bits (516), Expect = 1e-51
Identities = 90/105 (85%), Positives = 102/105 (96%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+ATLG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIATLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGG 193
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGG
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGG 105
>dbj|BAB18415.1| (AB044489) photosystem II CP43 apoprotein [Eudorina unicocca]
dbj|BAB18417.1| (AB044491) photosystem II CP43 apoprotein [Eudorina unicocca]
Length = 105
Score = 203 bits (512), Expect = 3e-51
Identities = 89/105 (84%), Positives = 102/105 (96%)
Query: 89 LPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
LPH+A+LG+GVGPGGE+IDTFPYFVSGVLHLISSAVLGFGG+YH+L+GPETLEESFPFFG
Sbjct: 1 LPHIASLGYGVGPGGEIIDTFPYFVSGVLHLISSAVLGFGGVYHSLIGPETLEESFPFFG 60
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGG 193
YVWKD+NKMT ILG HLI+LG+GA+LLV+KA YFGG+YDTWAPGG
Sbjct: 61 YVWKDKNKMTNILGYHLIILGLGAWLLVWKAMYFGGVYDTWAPGG 105
>gb|AAC45351.1| (U57660) chlorophyll a/b binding light harvesting protein PCB
[Prochlorococcus sp. CCMP1378]
Length = 352
Score = 203 bits (511), Expect = 4e-51
Identities = 122/281 (43%), Positives = 159/281 (56%), Gaps = 21/281 (7%)
Query: 31 TGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLP 90
T + WWAGN+ + N SGK + AHVAHAGLIVFWAGA LFE++ F P PM +Q LI LP
Sbjct: 9 TTYGWWAGNSGVANRSGKFIAAHVAHAGLIVFWAGAFTLFELSRFDPSVPMGQQPLIALP 68
Query: 91 HLATLGWGVGPGGEVI-DTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEES----FP 145
HLATLG G G ++ DT P ++HL+SS VL GG+ H+LL P LEES
Sbjct: 69 HLATLGIGFDADGVLMGDTKPVLAIAIVHLVSSMVLAAGGLLHSLLLPGNLEESEVAKAR 128
Query: 146 FFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLS 205
F W + +K+T ILG HLI+LG LLV A G+YD P G VR++
Sbjct: 129 KFNIEWDNPDKLTFILGHHLIILGFAVILLVEWARVH-GVYD---PAIGAVRQVE----- 179
Query: 206 PSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTK---PFAWARR 262
+ L + + + +DDLED++GGH +L + I GG WHI TK + +
Sbjct: 180 ----YDLNLAEIWNHQTDFLLIDDLEDVMGGHAFLAFVLITGGAWHIATKQVGEYTKFKG 235
Query: 263 ALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
+ S EA LS+SLA + IA + N T YP EF+G
Sbjct: 236 KGLLSAEAVLSWSLAGIGWMAIIAAFWSASNTTVYPVEFFG 276
Score = 41.4 bits (95), Expect = 0.025
Identities = 16/26 (61%), Positives = 18/26 (68%)
Query: 423 RSWLATSHFVLGFFLFVGHLWHAGRA 448
R+WLA H+ GFF GHLWHA RA
Sbjct: 303 RAWLANVHYYFGFFFIQGHLWHALRA 328
>gb|AAF61303.1|AF198528_1 (AF198528) chlorophyll a/b binding light harvesting protein PCB
[Prochlorococcus marinus]
Length = 352
Score = 177 bits (444), Expect = 3e-43
Identities = 108/280 (38%), Positives = 156/280 (55%), Gaps = 23/280 (8%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+AW+AGN+ N SGK + AH AHAGL++FWAGA LFE+A + PM Q LI LPHL
Sbjct: 11 YAWYAGNSGTTNRSGKFIAAHAAHAGLMMFWAGAFTLFELARYDSSIPMGNQNLICLPHL 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHAL-----LGPETLEESFPFF 147
A LG G G + + + V VLHLI S VLG GG+ H++ LG F
Sbjct: 71 AGLGIGGVSNGVITEPYGCTVIAVLHLIFSGVLGAGGLLHSMRYEGDLGNYPEGSRAKKF 130
Query: 148 GYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPS 207
+ W D +++T ILG HLI LG+G V + + GIYD+ A G + + N L
Sbjct: 131 DFEWDDPDRLTFILGHHLIFLGLGNIQFV-EWARIHGIYDS-AQG---ITRTVNYNLDLG 185
Query: 208 IIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFA----WARRA 263
+I+ + + ++++ LED++GGH +L I+GG +HI TK + + +
Sbjct: 186 MIWNH--------QADFLTINSLEDVMGGHAFLAFFLIIGGAFHIATKQYGQYTEFKGKG 237
Query: 264 LVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
L+ S E+ LSYSLA ++ F+A + N T YP++ YG
Sbjct: 238 LL-SAESVLSYSLAGVAYCAFVAAFWCATNTTIYPTDLYG 276
Score = 41.4 bits (95), Expect = 0.025
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 423 RSWLATSHFVLGFFLFVGHLWHAGR 447
R+WL+ HF LGFF GHLWHA R
Sbjct: 303 RAWLSNVHFYLGFFFLQGHLWHALR 327
>emb|CAA28193.1| (X04509) 44 kDA protein of photosystem II [Euglena gracilis]
Length = 107
Score = 174 bits (436), Expect = 3e-42
Identities = 82/97 (84%), Positives = 91/97 (93%)
Query: 37 AGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLG 96
+GNARLIN+SGKLLGAHVAHAGLIVFW GAMNLFEVAHFVP+KPMYEQGLILLPHLATLG
Sbjct: 1 SGNARLINVSGKLLGAHVAHAGLIVFWTGAMNLFEVAHFVPQKPMYEQGLILLPHLATLG 60
Query: 97 WGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHA 133
+GVG G V+DT+P+FV GVLHLISSAVLGFGG++ A
Sbjct: 61 FGVGFDGIVLDTYPFFVCGVLHLISSAVLGFGGVFRA 97
>gb|AAF61306.1|AF198531_1 (AF198531) chlorophyll a/b binding light harvesting protein PCB
[Prochlorococcus marinus]
Length = 353
Score = 170 bits (426), Expect = 4e-41
Identities = 114/282 (40%), Positives = 151/282 (53%), Gaps = 26/282 (9%)
Query: 33 FAWWAGNARLI-NLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPH 91
+AW+A NA + N SG+ + +H+AH GLI F AGA LFE+A + P+ PM QGL++LPH
Sbjct: 11 YAWYAANAGAVTNKSGRFISSHIAHTGLICFGAGANTLFELARYNPDLPMGSQGLVVLPH 70
Query: 92 LATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPF----- 146
LA LG G G DT+ V +LHLI S V G GG+ HA E L ES+P
Sbjct: 71 LAGLGLGGISNGVFTDTYQLLVVAILHLILSGVYGGGGMLHAFRYEEKL-ESYPATSRAN 129
Query: 147 -FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKIT-NLTL 204
F + W D +++T ILG HL+ L G V A GIYD P G VR++ NL L
Sbjct: 130 KFKFDWNDPDRLTFILGHHLLFLAAGNIQFVEWARVH-GIYD---PVAGAVRQVEYNLDL 185
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFA---WAR 261
G + F +S+ LEDI+GGH +L GG++HILTK + +
Sbjct: 186 ------GMIWNHQFD----FLSISSLEDIMGGHAFLAFFMAAGGVFHILTKNYGEYNSFK 235
Query: 262 RALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
A + S E LS SLA + F+A + N T YP + YG
Sbjct: 236 GADLLSAEFVLSTSLAGAAYTAFVAALWCASNTTIYPVDLYG 277
Score = 35.2 bits (79), Expect = 1.9
Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 6/53 (11%)
Query: 423 RSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFE-KGIDRDFEPV-LSMTPLN 473
R+WL HF +GFF GH +H R A GF+ K I + F+ + S T LN
Sbjct: 305 RAWLTNVHFFIGFFYLQGHFFHGLR----ALGFDFKSIGKLFDNLETSETTLN 353
>emb|CAA96550.1| (Z72475) chlorophyll a/b light-harvesting protein [Prochloron
didemni]
Length = 154
Score = 167 bits (419), Expect = 3e-40
Identities = 80/143 (55%), Positives = 99/143 (68%), Gaps = 3/143 (2%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+ WWAGNAR NLSG + AHV A LI FWAGA LFE++ F P + M EQG+ILLPHL
Sbjct: 11 YDWWAGNARFANLSGLFIAAHVGQAALITFWAGAFTLFEISWFDPGRSMGEQGMILLPHL 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEES---FPFFGY 149
ATLG GVG GGE++DT+PYFV G +HLISSAVLG G ++H PE L+ + F +
Sbjct: 71 ATLGLGVGDGGEIVDTYPYFVVGAVHLISSAVLGAGALFHTFRAPEDLKTATGQAKKFHF 130
Query: 150 VWKDRNKMTTILGIHLILLGIGA 172
W D ++ ILG HL+ LG+GA
Sbjct: 131 DWDDPKQLGLILGHHLLFLGLGA 153
>gb|AAC45352.1| (U57661) chlorophyll a/b binding light harvesting protein PCB
[Prochlorococcus marinus]
Length = 351
Score = 161 bits (404), Expect = 1e-38
Identities = 100/279 (35%), Positives = 142/279 (50%), Gaps = 22/279 (7%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+ WWAGN+ + + GK + AH AH GL F AGA LFE+A F P PM Q LI LPHL
Sbjct: 11 YGWWAGNSGVTHPPGKFIAAHAAHTGLDCFLAGAFTLFELARFDPSVPMGHQPLIALPHL 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPF----FG 148
ATLG G G + ++HL+ S V G GG+ H+L P +++S F
Sbjct: 71 ATLGIGFDEAGTFVGGTTVTAIAIVHLVLSMVYGAGGLLHSLTFPGDMQDSEVLQARKFK 130
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKIT-NLTLSPS 207
W + + T ILG HLI LG+ V A G W G +R++ NL LS
Sbjct: 131 LEWDNPDNQTFILGHHLIFLGVANIQFVEWARIDG----IWDAAAGSIRQVEYNLNLS-- 184
Query: 208 IIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTK---PFAWARRAL 264
S + + +++++LED++GGH +L I GG +HI TK + + +
Sbjct: 185 --------SIWNHQFDFLTINNLEDVMGGHAFLAFFMITGGAFHIATKQVGEYTKFKGSG 236
Query: 265 VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
+ S EA LS+SLA + +A + N T YP +F+G
Sbjct: 237 LLSAEAILSWSLAGIGWMAIVAAFWCATNTTVYPVDFFG 275
Score = 41.0 bits (94), Expect = 0.032
Identities = 16/26 (61%), Positives = 18/26 (68%)
Query: 423 RSWLATSHFVLGFFLFVGHLWHAGRA 448
R+WL H+ LGFF GHLWHA RA
Sbjct: 302 RAWLTNVHYFLGFFYIQGHLWHALRA 327
>prf||1010249C URF 2 C term [Euglena gracilis]
Length = 108
Score = 157 bits (394), Expect = 2e-37
Identities = 70/97 (72%), Positives = 78/97 (80%)
Query: 243 ICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFY 302
+ + GG WHI ++P W R VWSGEAYLSYSL A++ GFIA VWFNNT YPSEFY
Sbjct: 2 LLVSGGFWHICSRPSPWVVRTFVWSGEAYLSYSLGAVATMGFIAVPMVWFNNTVYPSEFY 61
Query: 303 GPTGPEASQAQAFTFLVRDQRLGANVGSAQGPTGLGK 339
GPTGPEASQAQAFTFL+RDQRLG N+ SAQGPTGLGK
Sbjct: 62 GPTGPEASQAQAFTFLIRDQRLGTNIASAQGPTGLGK 98
>gb|AAF61305.1|AF198530_1 (AF198530) chlorophyll a/b binding light harvesting protein PCB
[Prochlorococcus marinus]
Length = 354
Score = 155 bits (389), Expect = 8e-37
Identities = 101/285 (35%), Positives = 146/285 (50%), Gaps = 28/285 (9%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+ +WAGNA + N SG+ + +H AH G+I F AG+ LFE++ F PM +QG + LPHL
Sbjct: 11 YDYWAGNASVTNRSGRFIASHAAHTGMIAFGAGSNTLFELSRFDSSLPMGDQGFVFLPHL 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEES----FPFFG 148
A++G G G V +LHLI S V G GG+ HA+ P+ +++S F
Sbjct: 71 ASVGIGFDEAG-VWTGAGVVTLAILHLILSMVYGAGGLLHAIYFPDDMQKSNVPQARKFK 129
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
W + + T ILG HLIL G+ V + + GIYD P G VR++ N L S+
Sbjct: 130 LEWDNPDNQTFILGHHLILFGLACAWFV-EWARIHGIYD---PAIGAVRQV-NYNLDLSM 184
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL---- 264
I+ + +++D LED++GGH +L I GG +H + W + L
Sbjct: 185 IWERQVN--------FLNIDSLEDVMGGHAFLAFAEITGGCFHAIAGSTKWEDKRLGEYD 236
Query: 265 ------VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
+ S EA LS+SLA + +A + N T YP EFYG
Sbjct: 237 RLKGAGLLSAEAILSFSLAGIGWMAIVAAFWCSQNTTVYPIEFYG 281
Score = 39.1 bits (89), Expect = 0.12
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRA 448
S R + A H++ GFF F GHLWHA RA
Sbjct: 310 SGRCYTANFHYIAGFFAFQGHLWHALRA 337
>gb|AAF61304.1|AF198529_1 (AF198529) chlorophyll a/b binding light harvesting protein PCB
[Prochlorococcus marinus]
Length = 361
Score = 151 bits (378), Expect = 2e-35
Identities = 100/289 (34%), Positives = 142/289 (48%), Gaps = 30/289 (10%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+ WW GN+ + N S + +G+HVAH GLI F AGA L+E+A F P+ PM QG++ +PHL
Sbjct: 11 YGWWVGNSVVTNKSSRFIGSHVAHTGLIAFTAGANTLWELARFNPDIPMGHQGMVSIPHL 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFG---- 148
A+LG G G FV G+ HLI S V G+ H+++ E + S F
Sbjct: 71 ASLGIGFDQAGAWTGQDVAFV-GIFHLICSFVYALAGLLHSVIFSEDTQNSSGLFADGRP 129
Query: 149 ---------YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKI 199
W + + T ILG HL+ G+ V A GIYD P +R++
Sbjct: 130 EHRQAARFKLEWDNPDNQTFILGHHLVFFGVANIWFVEWARVH-GIYD---PAIEAIRQV 185
Query: 200 TNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTK---P 256
N L + I+ + + +D LED++GGH +L I GG +HI TK
Sbjct: 186 -NYNLDLTQIWNHQFD--------FIQIDSLEDVMGGHAFLAFFQIGGGAFHIATKQIGT 236
Query: 257 FAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + A + S EA LS+SLA + IA + N T YP +YG T
Sbjct: 237 YTNFKGAGLLSAEAVLSWSLAGIGWMAIIAAFWCATNTTVYPEAWYGET 285
Score = 41.8 bits (96), Expect = 0.019
Identities = 16/26 (61%), Positives = 19/26 (72%)
Query: 423 RSWLATSHFVLGFFLFVGHLWHAGRA 448
R+WL+ H+ LGFF GHLWHA RA
Sbjct: 312 RAWLSNVHYYLGFFFIQGHLWHAIRA 337
>gb|AAF61302.1|AF198527_1 (AF198527) chlorophyll a/b binding light harvesting protein PCB
[Prochlorococcus marinus]
Length = 361
Score = 150 bits (375), Expect = 4e-35
Identities = 97/285 (34%), Positives = 143/285 (50%), Gaps = 28/285 (9%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+ WWAGN+ + N SG+ + +HV H GLI F AG L+E+A + PE PM Q + L HL
Sbjct: 11 YGWWAGNSVVTNRSGRFIASHVGHTGLICFAAGGSTLWELARYNPEIPMGHQSSLFLAHL 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPF----FG 148
A++G G G ++ ++HLI S V G GG+ H +L E +E+S F
Sbjct: 71 ASIGIGFDEAGAWTGVGVATIA-IVHLILSMVYGGGGLLHGILFDENVEDSEVLQAKKFK 129
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
W + + T ILG HLI +G+ V + + GIYD P G +R++ N L S+
Sbjct: 130 LEWNNPDNQTFILGHHLIFMGVACAWFV-EWARIHGIYD---PALGAIRQV-NYNLDLSM 184
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL---- 264
I+ +++D LED++GGH +L I GG +HI+ W + L
Sbjct: 185 IWQRQFD--------FITIDSLEDVMGGHAFLAFAEITGGAFHIVAGSTPWEDKKLGEWS 236
Query: 265 ------VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
+ S EA LS+SLA + +A + N T YP +YG
Sbjct: 237 KFKGSELLSAEAVLSWSLAGIGWMAIVAAFWCASNTTVYPEAWYG 281
Score = 35.6 bits (80), Expect = 1.4
Identities = 15/28 (53%), Positives = 17/28 (60%)
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRA 448
S R+ L H+ LGFF GH WHA RA
Sbjct: 310 SARAALTNVHYYLGFFFLQGHFWHALRA 337
>emb|CAA10617.1| (AJ132263) PSII CP43 chlorophyll apoprotein [Skeletonema costatum]
Length = 81
Score = 142 bits (354), Expect = 1e-32
Identities = 66/81 (81%), Positives = 72/81 (88%)
Query: 393 AEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAA 452
AEYMTHAPLGSLNSVGGVATEIN+VNYVSPRSWL SHF LGFF +GH WH+GRARAAA
Sbjct: 1 AEYMTHAPLGSLNSVGGVATEINSVNYVSPRSWLCCSHFFLGFFFLIGHWWHSGRARAAA 60
Query: 453 AGFEKGIDRDFEPVLSMTPLN 473
AGFEKGI+R EPVLSM P++
Sbjct: 61 AGFEKGINRANEPVLSMRPID 81
>gb|AAF61301.1|AF198526_1 (AF198526) chlorophyll a/b binding light harvesting protein PCB
[Prochlorococcus marinus]
Length = 349
Score = 138 bits (343), Expect = 2e-31
Identities = 94/278 (33%), Positives = 137/278 (48%), Gaps = 21/278 (7%)
Query: 33 FAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHL 92
+ WWAGN+ + N SGK + AH AH GLI F GA L E+A F P PM Q + L HL
Sbjct: 11 YGWWAGNSGVTNRSGKFIAAHAAHTGLIAFGCGAATLVELAGFDPSLPMGHQSSLFLAHL 70
Query: 93 ATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEES----FPFFG 148
A++G G G V +LHLI S V G GG+ H++ +++S F
Sbjct: 71 ASVGIGFDDAG-VWTGVGVANIAILHLILSMVYGGGGLLHSVYFTGDMQDSQVPQARKFK 129
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
W + + T ILG HL+ G+ V + + GIYD P +R++ N L +
Sbjct: 130 LEWDNPDNQTFILGHHLLFFGVANIWFV-EWARIHGIYD---PAIEAIRQV-NYNLDLTQ 184
Query: 209 IFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTK---PFAWARRALV 265
I+ + +++D LED++GGH +L + GG +HI TK + + +
Sbjct: 185 IWNHQFD--------FLAIDSLEDVMGGHAFLAFFQLGGGAFHIATKQIGTYTKFKGKEL 236
Query: 266 WSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYG 303
S EA LS+SLA + +A + N T YP +YG
Sbjct: 237 LSAEAILSWSLAGIGWMACVAAFWAATNTTVYPEAWYG 274
Score = 36.4 bits (82), Expect = 0.82
Identities = 17/39 (43%), Positives = 23/39 (58%), Gaps = 2/39 (5%)
Query: 423 RSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDR 461
R+ L H+ LGFF GHLWHA RA F++ +D+
Sbjct: 303 RAALVNVHYYLGFFFIQGHLWHA--LRAMGFDFKRLLDK 339
>dbj|BAB18442.1| (AB044516) photosystem II CP43 apoprotein [Astrephomene
gubernaculifera]
Length = 70
Score = 131 bits (327), Expect = 2e-29
Identities = 55/70 (78%), Positives = 61/70 (86%)
Query: 237 HVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTA 296
H+W+G++ ILGGIWHI T P+ WARRA VWSGEAYLSYSL A+SV GFIACC WFNNTA
Sbjct: 1 HIWIGTLEILGGIWHIYTTPWPWARRAFVWSGEAYLSYSLGAISVMGFIACCMSWFNNTA 60
Query: 297 YPSEFYGPTG 306
YPSEFYGPTG
Sbjct: 61 YPSEFYGPTG 70
>emb|CAA30402.1| (X07522) psbC (AA 1-52) (1408 is 1st base in codon) [Hordeum
vulgare]
Length = 52
Score = 103 bits (255), Expect = 4e-21
Identities = 48/52 (92%), Positives = 48/52 (92%)
Query: 1 MKTLYSLRRFYHVETLFNGTLALTGRDQETTGFAWWAGNARLINLSGKLLGA 52
MK LYSLRRFYHVETLFNGT L GRDQETTGFAWWAGNARLINLSGKLLGA
Sbjct: 1 MKILYSLRRFYHVETLFNGTFVLAGRDQETTGFAWWAGNARLINLSGKLLGA 52
>sp|P31094|PSBB_SYNP7 PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||S33774 photosystem II chlorophyll a-binding protein psbB - Synechococcus
sp. (strain PCC 7942)
emb|CAA78465.1| (Z14087) CP-47 polypeptide of photosystem II [Synechococcus sp.]
Length = 508
Score = 101 bits (249), Expect = 2e-20
Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAIFDPSDAVLNPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
+LP +A L GW + G +D + GV H++ S +L ++H +
Sbjct: 62 VLPFMARLGVTQSWGGWSI-TGETAVDPGYWSFEGVAIAHIVLSGLLFLAAVWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
L P G D KM GIHL L G+ F F A + G+ W PG D
Sbjct: 121 ELFTD-PRTGEPALDLPKM---FGIHLFLSGLLCF--GFGAFHLSGL---WGPGMWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T + +G +PF G I+ H+ G + I+ G++H+ +P
Sbjct: 172 YGLTGHVQPVAPAWGPEGFNPFNPGG----------IVAHHIAAGVVGIVAGLFHLTVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+AL + + E LS SLAA+ F+ +W+ N A P E +GPT
Sbjct: 222 PERLYKALRMGNIETVLSSSLAAVFFAAFVVAGTMWYGNAATPVELFGPT 271
Score = 38.3 bits (87), Expect = 0.21
Identities = 29/98 (29%), Positives = 38/98 (38%), Gaps = 14/98 (14%)
Query: 369 LRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLAT 428
L G D +++KK + Q + E+ T +LNS G T SPR W
Sbjct: 406 LNGQTITDPAQVKKYARKAQLGEAFEFDTE----TLNSDGVFRT--------SPRGWFTF 453
Query: 429 SHFVLGFFLFVGHLWHAGRA--RAAAAGFEKGIDRDFE 464
H F GH+WH R R AG E + E
Sbjct: 454 GHASFALLFFFGHIWHGSRTLFRDVFAGIEADLGEQIE 491
>gb|AAD10227.1| (U72054) psbC [Anabaena sp. CA]
Length = 59
Score = 100 bits (246), Expect = 5e-20
Identities = 49/59 (83%), Positives = 52/59 (88%), Gaps = 1/59 (1%)
Query: 390 RRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA 448
RR+AEYMTHAPLGSLNSVGGVATEIN+ NYVSPR+WLATSHFVL L HLWHAGRA
Sbjct: 1 RRAAEYMTHAPLGSLNSVGGVATEINSFNYVSPRAWLATSHFVL-VLLPRSHLWHAGRA 58
>gi|11465788 Photosystem II p680 chlorophyll A apoprotein (CP-47) [Porphyra
purpurea]
sp|P51322|PSBB_PORPU PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||S73243 photosystem II protein A - red alga (Porphyra purpurea) chloroplast
gb|AAC08208.1| (U38804) Photosystem II p680 chlorophyll A apoprotein (CP-47)
[Porphyra purpurea]
Length = 509
Score = 97.5 bits (239), Expect = 3e-19
Identities = 83/290 (28%), Positives = 133/290 (45%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P +A L GW + G V + + + GV H++ S +L I+H +
Sbjct: 62 VMPFMARLGVTDSWGGWSI-TGESVSNPGLWSLEGVALTHIVLSGMLFLAAIWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIY--DTWAPGGGDV 196
L P G D K I GIHL+L + F F A + G++ W G V
Sbjct: 121 ELFRD-PRTGEPALDLPK---IFGIHLLLSSLLCF--GFGAFHVTGLFGPGMWVSDGYGV 174
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
T L + +G +PF G + H+ G++ IL G++H+ +P
Sbjct: 175 ---TGKVLPVAPAWGPEGFNPFNPGG----------VASHHIAAGTVGILAGVFHLTVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
RAL + + E LS S++A+ FI C +W+ + P E +GPT
Sbjct: 222 PQRLYRALRMGNIETVLSSSISAVFFSAFITCGTMWYGSATTPIELFGPT 271
Score = 38.3 bits (87), Expect = 0.21
Identities = 18/54 (33%), Positives = 21/54 (38%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGR 447
+Y A LG + E + V SPR W H F GHLWH R
Sbjct: 419 KYARKAQLGEVFEFDRTTLESDGVFRSSPRGWFTFGHANFALIFFFGHLWHGSR 472
>dbj|BAB19261.1| (AB052566) CP47 protein [Thermosynechococcus elongatus]
Length = 510
Score = 96.0 bits (235), Expect = 9e-19
Identities = 85/290 (29%), Positives = 132/290 (45%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + LIN G+L+ AH+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVLINDPGRLIAAHLMHTALVAGWAGSMALYELATFDPSDPVLNPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
+LP +A L GW + G ID + GV H++ S +L +H +
Sbjct: 62 VLPFMARLGVTGSWSGWSI-TGETGIDPGFWSFEGVALAHIVLSGLLFLAACWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
L P G D KM GIHL L G+ F F A + G++ PG D
Sbjct: 121 ELFRD-PRTGEPALDLPKM---FGIHLFLAGLLCF--GFGAFHLTGLF---GPGMWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T + +G +P+ G ++ H+ G + I+ G++HIL +P
Sbjct: 172 YGLTGSVQPVAPEWGPDGFNPYNPGG----------VVAHHIAAGIVGIIAGLFHILVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+AL + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 222 PQRLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 37.9 bits (86), Expect = 0.28
Identities = 17/45 (37%), Positives = 20/45 (43%), Gaps = 2/45 (4%)
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEP 465
SPR W +H V F GH+WH AR GID + P
Sbjct: 446 SPRGWFTFAHAVFALLFFFGHIWHG--ARTLFRDVFSGIDPELSP 488
>emb|CAA39391.1| (X55900) psbB product, chlorophyll a-binding apoprotein (AA 1-508)
[Oenothera elata subsp. hookeri]
emb|CAB67185.1| (AJ271079) PSII P680 apoprotein (CP47) [Oenothera elata subsp.
hookeri]
Length = 508
Score = 96.0 bits (235), Expect = 9e-19
Identities = 121/515 (23%), Positives = 192/515 (36%), Gaps = 107/515 (20%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGVL--HLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG V + + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITNSWGGWSI-TGGTVTNPGIWSYEGVAGSHILFSGLCFLAAIWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
+ K + I GIHL L G+ F F A + G+Y PG D
Sbjct: 121 AIFSD----ERTGKPSLDLPKIFGIHLFLSGLACF--GFGAFHVTGLY---GPGIWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T + +G PF G I H+ G++ IL G++H+ +P
Sbjct: 172 YGLTGEVQPVNPAWGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAF 315
+ L + + E LS S+AA+ F+ +W+ + P E +GPT + Q
Sbjct: 222 PQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQ 281
Query: 316 TFLVRDQRLGANVGSAQG--------PTGLG--KYLMRSPTGEVIFGGETMRFWD-LRAP 364
+ R R+GA + Q P L Y+ +P +F +M D +
Sbjct: 282 QEIYR--RVGAGLAKNQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDSGDGIAVG 339
Query: 365 WL-EPL-RGPNGLDL--SRLKKDIQPWQ----------------ERRSAEYMTHAPLGSL 404
WL P+ R G +L R+ + + R ++Y ++
Sbjct: 340 WLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTI 399
Query: 405 NSVGGVATEINAVNYVSP---------------------------------RSWLATSHF 431
GG E+N V+Y P R W H
Sbjct: 400 EFYGG---ELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHA 456
Query: 432 VLGFFLFVGHLWHAGRA--RAAAAGFEKGIDRDFE 464
F GH+WH R R AG + +D E
Sbjct: 457 SFALLFFFGHIWHGARTLFRDVFAGIDPDLDTQVE 491
>sp|P10900|PSBB_HORVU PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||S04100 photosystem II chlorophyll a-binding protein psbB - barley
chloroplast
emb|CAA32264.1| (X14107) chlorophyll a-binding protein [Hordeum vulgare]
Length = 508
Score = 96.0 bits (235), Expect = 9e-19
Identities = 119/513 (23%), Positives = 190/513 (36%), Gaps = 103/513 (20%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG V + + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITDSWGGWSIS-GGTVTNPGIWSYEGVAATHIVFSGLCFLAAIWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
+ K + I GIHL L G+ F F A + G+Y PG D
Sbjct: 121 EIFSD----ERTGKPSLDLPKIFGIHLFLAGVACF--GFGAFHVTGLY---GPGIWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T + + +G PF G I H+ G++ IL G++H+ +P
Sbjct: 172 YGLTGKVQAVNPAWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAF 315
+ L + + E LS S+AA+ F+ +W+ + P E +GPT + Q
Sbjct: 222 PQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQ 281
Query: 316 TFLVR--DQRLGANVGSAQG----PTGLG--KYLMRSPTGEVIFGGETMRFWD-LRAPWL 366
+ R L N+ ++ P L Y+ +P +F +M D + WL
Sbjct: 282 QEIYRRVSNGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWL 341
Query: 367 --EPLRGPNGLDL--SRLKKDIQPWQ----------------ERRSAEYMTHAPLGSLNS 406
R G +L R+ + + R ++Y ++
Sbjct: 342 GHPVFRDKEGRELFVRRMPTFFETFPVVLVDEEGIVRADVPFRRAESKYSVEQVGVTVEF 401
Query: 407 VGGVATEINAVNYVSP---------------------------------RSWLATSHFVL 433
GG E+N VNY P R W H
Sbjct: 402 YGG---ELNGVNYSDPATVKKYARRSQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATF 458
Query: 434 GFFLFVGHLWHAGRA--RAAAAGFEKGIDRDFE 464
F GH+WH R R AG + +D E
Sbjct: 459 ALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVE 491
>sp|P20093|PSBB_ANASP PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||JA0148 photosystem II chlorophyll a-binding protein psbB - Anabaena sp.
(strain PCC 7120)
emb|CAA41653.1| (X58847) photosystem II chlorophyll-binding protein CP-47 [Anabaena
PCC7120]
Length = 509
Score = 95.6 bits (234), Expect = 1e-18
Identities = 82/290 (28%), Positives = 131/290 (44%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A + P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLISVHLMHTALVAGWAGSMALYELAIYDPSDPVLNPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
+LP +A L GW V GG D + GV H++ S +L ++H +
Sbjct: 62 VLPFMARLGVTQSWGGWSV-TGGTATDPGFWSFEGVAAAHIVLSGLLFLAAVWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGG--GDV 196
L P G D KM GIHL L G+ F F A + G++ PG D
Sbjct: 121 ELFRD-PRTGEPALDLPKM---FGIHLFLSGLLCF--GFGAFHLTGLF---GPGMWISDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T + +G +PF G ++ H+ G + I+ G++H+ +P
Sbjct: 172 YGVTGSVQPVAPEWGPDGFNPFNPGG----------VVAHHIAAGIVGIIAGLFHLTVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+AL + + E LS S+AA+ F+ +W+ N P E +GPT
Sbjct: 222 PERLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGNATTPIELFGPT 271
Score = 39.5 bits (90), Expect = 0.095
Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRA--RAAAAGFEKGIDRDFE 464
SPR W H V F GHLWH R R AG E ++ E
Sbjct: 446 SPRGWFTFGHAVFALLFFFGHLWHGARTIYRDVFAGVEADLEEQVE 491
>sp|P19819|PSBB_OENHO PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||S12132 photosystem II chlorophyll a-binding protein psbB - Hooker's
evening primrose chloroplast
pir||S12129 photosystem II chlorophyll a-binding protein psbB - Appalachian
evening primrose chloroplast
emb|CAA39388.1| (X55899) psbB product, chlorophyll a-binding apoprotein (AA 1-508)
[Oenothera argillicola]
Length = 508
Score = 95.6 bits (234), Expect = 1e-18
Identities = 121/515 (23%), Positives = 192/515 (36%), Gaps = 107/515 (20%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGVL--HLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG V + + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITNSWGGWSI-TGGTVTNPGIWSYEGVAGSHILFSGLCFLAAIWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
+ K + I GIHL L G+ F F A + G+Y PG D
Sbjct: 121 AIFSD----ERTGKPSLDLPKIFGIHLFLSGLACF--GFGAFHVTGLY---GPGIWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T + +G PF G I H+ G++ IL G++H+ +P
Sbjct: 172 YGLTGEVQPVNPAWGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAF 315
+ L + + E LS S+AA+ F+ +W+ + P E +GPT + Q
Sbjct: 222 PQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQ 281
Query: 316 TFLVRDQRLGANVGSAQG--------PTGLG--KYLMRSPTGEVIFGGETMRFWD-LRAP 364
+ R R+GA + Q P L Y+ +P +F +M D +
Sbjct: 282 QEIYR--RVGAGLAKNQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDSGDGIAVG 339
Query: 365 WL-EPL-RGPNGLDL--SRLKKDIQPWQ----------------ERRSAEYMTHAPLGSL 404
WL P+ R G +L R+ + + R ++Y ++
Sbjct: 340 WLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTV 399
Query: 405 NSVGGVATEINAVNYVSP---------------------------------RSWLATSHF 431
GG E+N V+Y P R W H
Sbjct: 400 EFYGG---ELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHA 456
Query: 432 VLGFFLFVGHLWHAGRA--RAAAAGFEKGIDRDFE 464
F GH+WH R R AG + +D E
Sbjct: 457 SFALLFFFGHIWHGARTLFRDVFAGIDPDLDTQVE 491
>sp|O03061|PSBB_POPDE PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
emb|CAA73765.1| (Y13328) 51kDa chlorophyll a protein [Populus deltoides]
Length = 509
Score = 95.2 bits (233), Expect = 2e-18
Identities = 120/511 (23%), Positives = 185/511 (35%), Gaps = 98/511 (19%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + +N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVELNDPGRLLAVHMMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGVL--HLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG + + + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITKSWGGWSI-TGGTITNPGIWSYEGVAGSHIVFSGLCFLAAIWHWVY--- 117
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
+ K + I GIHL L G+ F F A + G+Y PG D
Sbjct: 118 -WDLEIFCDDRTGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T S + +G PF G I H+ G++ IL G++H+ +P
Sbjct: 172 YGLTGKVQSVNPAWGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRP 221
Query: 257 FAWARRAL-VWSGEAYL-SYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA-- 312
+ L + + E L S S+AA+ F+ +W+ + P E +GPT + Q
Sbjct: 222 PQRLYKGLRMGNIETVLSSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYF 281
Query: 313 ------QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD-LRAPW 365
+ T L +Q L Y+ +P +F +M D + W
Sbjct: 282 QQEIYRRVGTGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAIGW 341
Query: 366 L-EPL------------RGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVAT 412
L PL R P + R+ D R + S+ VG
Sbjct: 342 LGHPLIRDKEGRDVFVRRIPTFFETFRVVLDDDDGMVRADVPFRRAESKYSVEQVGVTVE 401
Query: 413 ----EINAVNY---------------------------------VSPRSWLATSHFVLGF 435
E+N V+Y SPR W H
Sbjct: 402 FYGGELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFAL 461
Query: 436 FLFVGHLWHAGRA--RAAAAGFEKGIDRDFE 464
F GH+WH R R AG + +D E
Sbjct: 462 LFFFGHIWHGSRTLFRDVFAGIDPDLDAQVE 492
>gi|11467310 PsbB subunit of the photosystem II complex [Cyanophora paradoxa]
sp|P48103|PSBB_CYAPA PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||T06855 photosystem II protein A - Cyanophora paradoxa cyanelle
gb|AAA81198.1| (U30821) PsbB subunit of the photosystem II complex [Cyanophora
paradoxa]
Length = 509
Score = 94.8 bits (232), Expect = 2e-18
Identities = 85/289 (29%), Positives = 130/289 (44%), Gaps = 34/289 (11%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYEIAVFDPSDPVLNPMWRQGMF 61
Query: 88 LLPHLATLGWGVGPGGEVID----TFPYFVS----GVLHLISSAVLGFGGIYHALLGPET 139
+LP + LG GG I+ T P F S H+ S +L I+H +
Sbjct: 62 VLPFMVRLGITNSWGGWTINGENVTDPGFWSFEGVAAAHIGLSGLLFLAAIWHWVYWDLE 121
Query: 140 LEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVR 197
L P G D KM GIHL L G+ F F A + G++ PG D
Sbjct: 122 LFRD-PRTGEPALDLPKM---FGIHLFLSGLLCF--GFGAFHLTGLF---GPGMWVSDAY 172
Query: 198 KITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPF 257
IT + +G +PF G ++ H+ G + IL G++H+ +P
Sbjct: 173 SITGRVQPVAPAWGPEGFNPFNPGG----------VVSHHIAAGIVGILAGLFHLSVRPP 222
Query: 258 AWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+AL + + E LS S++A+ FI +W+ + A P E +GPT
Sbjct: 223 QRLYKALRMGNIETVLSSSISAVFFAAFIVAGTMWYGSAATPVELFGPT 271
Score = 35.2 bits (79), Expect = 1.9
Identities = 21/73 (28%), Positives = 26/73 (34%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + V S R W H F GHLWH GR R
Sbjct: 419 KYARKAQLGEAFEFDRETLKSDGVFRSSARGWFTFGHASFALIFFFGHLWHGGRTLFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + + E
Sbjct: 479 FAGIGEEVTEQVE 491
>sp|P05429|PSBB_SYNY3 PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||S06272 photosystem II chlorophyll a-binding protein psbB - Synechocystis
sp. (strain PCC 6803)
gb|AAA27297.1| (M17109) CP-47 protein [Synechocystis sp.]
dbj|BAA10458.1| (D64003) photosystem II P680 chlorophyll A apoprotein
[Synechocystis sp.]
prf||1401245A photosystem II protein CP47 [Synechocystis sp.]
Length = 507
Score = 94.0 bits (230), Expect = 4e-18
Identities = 82/290 (28%), Positives = 130/290 (44%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLISVHLMHTALVAGWAGSMALYELAIFDSSDAVLNPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
+LP +A L GW V G +D + GV H++ S +L ++H +
Sbjct: 62 VLPFMARLGVTSSWNGWSV-TGETGLDPGFWSFEGVAAAHIVLSGLLFLAAVWHWVFWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
L P G D KM GIHL L G+ F F A + G+ W PG D
Sbjct: 121 ELFVD-PRTGESALDLPKM---FGIHLFLSGLLCF--GFGAFHLTGV---WGPGMWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T + +G +PF G ++ H+ G + I+ G++H+ +P
Sbjct: 172 YGLTGHVQPVAPEWGPAGFNPFNPGG----------VVAHHIAAGIVGIIAGLFHLTVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+AL + + E LS S+AA+ F+ +W+ N P E +GPT
Sbjct: 222 PERLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGNATTPIELFGPT 271
Score = 40.2 bits (92), Expect = 0.055
Identities = 17/46 (36%), Positives = 21/46 (44%), Gaps = 2/46 (4%)
Query: 421 SPRSWLATSHFVLGFFLFVGHLWHAGRA--RAAAAGFEKGIDRDFE 464
SPR W H V F GH+WH R R AG + G++ E
Sbjct: 446 SPRGWFTFGHAVFALLFFFGHIWHGSRTLFRDVFAGVDPGLEEQVE 491
>gb|AAD51003.1|AF170925_1 (AF170925) photosystem II chlorophyll-binding protein CP-47
[Mastigocladus laminosus]
Length = 509
Score = 93.6 bits (229), Expect = 5e-18
Identities = 83/292 (28%), Positives = 132/292 (44%), Gaps = 40/292 (13%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A + P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLISVHLMHTALVAGWAGSMALYELAIYDPSDPVLNPMWRQGMF 61
Query: 88 LLPHLATLG----WGVGPGGEVIDTFPY---FVS----GVLHLISSAVLGFGGIYHALLG 136
+LP +A LG WG G VI Y F S H+I S +L ++H +
Sbjct: 62 VLPFMARLGVVGSWG---GWNVIGASNYDPGFWSFEGVAAAHIILSGLLFLAAVWHWVYW 118
Query: 137 PETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GG 194
L + P G D K I GIHL L G+ F F A + G+ W PG
Sbjct: 119 DLELFQD-PRTGEPALDLPK---IFGIHLFLAGLLCF--GFGAFHLTGL---WGPGMWVS 169
Query: 195 DVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILT 254
D +T + +G +P+ G ++ H+ G + I+ G++H+
Sbjct: 170 DAYGLTGHVAPVAPEWGPDGFNPYNPGG----------VVAHHIAAGIVGIIAGLFHLSV 219
Query: 255 KPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+P +AL + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 RPPERLYKALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 41.8 bits (96), Expect = 0.019
Identities = 24/84 (28%), Positives = 33/84 (38%), Gaps = 10/84 (11%)
Query: 383 DIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHL 442
D++ W R + +LNS G T SPR W +H V F GH+
Sbjct: 416 DVKKWARRAQLGEIFEFDRETLNSDGVFRT--------SPRGWFTFAHAVFALLFFFGHI 467
Query: 443 WHAGRA--RAAAAGFEKGIDRDFE 464
WH R R AG + ++ E
Sbjct: 468 WHGSRTLFRDVFAGIDPDLEEQVE 491
>gi|11465984 PSII 47kD protein [Nicotiana tabacum]
sp|P06411|PSBB_TOBAC PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||QJNT6A photosystem II chlorophyll a-binding protein psbB - common tobacco
chloroplast
emb|CAA77373.1| (Z00044) PSII 47kD protein [Nicotiana tabacum]
prf||1211235BF photosystem II P680 apoprotein [Nicotiana tabacum]
Length = 508
Score = 93.6 bits (229), Expect = 5e-18
Identities = 118/515 (22%), Positives = 189/515 (35%), Gaps = 107/515 (20%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG V + + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITNSWGGWSI-TGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 139 TL--EESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GG 194
+ +E K + I GIHL L G+ F F A + G+Y PG
Sbjct: 121 EIFCDER------TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVS 169
Query: 195 DVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILT 254
D +T + +G PF G I H+ G++ IL G++H+
Sbjct: 170 DPYGLTGKVQPVNPAWGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSV 219
Query: 255 KPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA- 312
+P + L + + E LS S+AA+ F+ +W+ + P E +GPT + Q
Sbjct: 220 RPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGY 279
Query: 313 -------QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD-LRAP 364
+ L +Q L Y+ +P +F +M D +
Sbjct: 280 FQQEIYRRVSAGLAENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVG 339
Query: 365 WL-EPL-RGPNGLDL--SRLKKDIQPWQ----------------ERRSAEYMTHAPLGSL 404
WL P+ R G +L R+ + + R ++Y ++
Sbjct: 340 WLGHPIFRDKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTV 399
Query: 405 NSVGGVATEINAVNYVSP---------------------------------RSWLATSHF 431
GG E+N V+Y P R W H
Sbjct: 400 EFYGG---ELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHA 456
Query: 432 VLGFFLFVGHLWHAGRA--RAAAAGFEKGIDRDFE 464
F GH+WH R R AG + +D E
Sbjct: 457 SFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVE 491
>gi|7525059 PSII 47KDa protein [Arabidopsis thaliana]
sp|P56777|PSBB_ARATH PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
dbj|BAA84411.1| (AP000423) PSII 47KDa protein [Arabidopsis thaliana]
Length = 508
Score = 93.2 bits (228), Expect = 6e-18
Identities = 116/515 (22%), Positives = 187/515 (35%), Gaps = 107/515 (20%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG + + + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITNSWGGWNI-TGGTITNPGLWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 139 TL--EESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GG 194
+ +E K + I GIHL L G+ F F A + G+Y PG
Sbjct: 121 EIFCDER------TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVS 169
Query: 195 DVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILT 254
D +T + +G PF G I H+ G++ IL G++H+
Sbjct: 170 DPYGLTGKVQPVNPAWGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSV 219
Query: 255 KPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA- 312
+P + L + + E LS S+AA+ F+ +W+ + P E +GPT + Q
Sbjct: 220 RPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGY 279
Query: 313 -------QAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD-LRAP 364
+ L +Q L Y+ +P +F +M D +
Sbjct: 280 FQQEIYRRVSAGLAENQSLSEAWAKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVG 339
Query: 365 WL--EPLRGPNGLDL--SRLKKDIQPWQ----------------ERRSAEYMTHAPLGSL 404
WL R G +L R+ + + R ++Y ++
Sbjct: 340 WLGHPVFRNKEGRELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTV 399
Query: 405 NSVGGVATEINAVNYVSP---------------------------------RSWLATSHF 431
GG E+N V+Y P R W H
Sbjct: 400 EFYGG---ELNGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHA 456
Query: 432 VLGFFLFVGHLWHAGRA--RAAAAGFEKGIDRDFE 464
F GH+WH R R AG + +D E
Sbjct: 457 SFALLFFFGHIWHGARTLFRDVFAGIDPDLDAQVE 491
>emb|CAA67379.1| (X98877) CP47 [Spinacia oleracea]
Length = 511
Score = 92.8 bits (227), Expect = 8e-18
Identities = 78/291 (26%), Positives = 127/291 (42%), Gaps = 36/291 (12%)
Query: 31 TGFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGL 86
+G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 4 SGLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGM 63
Query: 87 ILLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGP 137
++P + L GW + GG + D + GV H++ S + I+H +
Sbjct: 64 FVIPFMTRLGITNSWGGWSI-TGGTITDPGIWSYEGVAGAHIMFSGLCFLAAIWHWVYWD 122
Query: 138 ETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGD 195
+ K + I GIHL L G+ F F A + G+Y PG D
Sbjct: 123 LEIFSD----ERTGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSD 173
Query: 196 VRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTK 255
+T S +G PF G I H+ G++ IL G++H+ +
Sbjct: 174 PYGLTGKVQPVSPAWGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVR 223
Query: 256 PFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
P + L + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 224 PPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 274
Score = 40.6 bits (93), Expect = 0.042
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 422 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGSRTLFRDV 481
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 482 FAGIDPDLDVQVE 494
>gi|11497552 PSII 47kDa protein [Spinacia oleracea]
emb|CAB88753.1| (AJ400848) PSII 47kDa protein [Spinacia oleracea]
Length = 508
Score = 92.4 bits (226), Expect = 1e-17
Identities = 78/290 (26%), Positives = 126/290 (42%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG + D + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITNSWGGWSI-TGGTITDPGIWSYEGVAGAHIMFSGLCFLAAIWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
+ K + I GIHL L G+ F F A + G+Y PG D
Sbjct: 121 EIFSD----ERTGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T S +G PF G I H+ G++ IL G++H+ +P
Sbjct: 172 YGLTGKVQPVSPAWGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ L + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 222 PQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 40.6 bits (93), Expect = 0.042
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGSRTLFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDPDLDVQVE 491
>gi|11467747 PSII CP47 apoprotein [Guillardia theta]
sp|O78511|PSBB_GUITH PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
gb|AAC35733.1| (AF041468) PSII CP47 apoprotein [Guillardia theta]
Length = 509
Score = 92.4 bits (226), Expect = 1e-17
Identities = 85/292 (29%), Positives = 129/292 (44%), Gaps = 40/292 (13%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMY 61
Query: 88 LLPHLATLG----W-GVGPGGEVIDTFPYFVS----GVLHLISSAVLGFGGIYHALLGPE 138
++P +A +G W G GE + P F S + H+ S +L ++H +
Sbjct: 62 VMPFMARIGVTDSWGGWSITGESVSN-PGFWSFEGVALAHIGLSGLLFLAAVWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDT--WAPG--GG 194
L P G D K I GIHL+L G+ F FG + T W PG
Sbjct: 121 ELFRD-PRTGNPALDLPK---IFGIHLVLAGLLCF-------GFGAFHVTGAWGPGIWVS 169
Query: 195 DVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILT 254
D IT + +G +PF G + H+ G + + GI+HI
Sbjct: 170 DAYGITGKVQPVAPTWGPEGFNPFNPSG----------VASHHIAAGILGFIAGIFHIAV 219
Query: 255 KPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+P RAL + + E LS S+AA+ FI +W+ + P E +GPT
Sbjct: 220 RPPQRLYRALRMGNIETVLSSSIAAVFFAAFITTGTMWYGSATTPIELFGPT 271
Score = 38.7 bits (88), Expect = 0.16
Identities = 18/54 (33%), Positives = 22/54 (40%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGR 447
+Y A LG + E + V SPR W H F+GHLWH R
Sbjct: 419 KYARKAQLGEVLEFDRTTLESDGVFRSSPRGWYTFGHANFALLFFLGHLWHGSR 472
>gb|AAD41884.1|AF153442_1 (AF153442) photosystem II chlorophyll a-apoprotein [Pisum sativum]
Length = 507
Score = 91.7 bits (224), Expect = 2e-17
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 40/292 (13%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG + + + GV H++ S + I+H L
Sbjct: 62 VIPFMTRLGITNSWGGWNI-TGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWLYWDL 120
Query: 139 TL--EESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GG 194
+ +E K + I GIHL L G+ F F A + G++ PG
Sbjct: 121 EIFCDER------TGKPSLDLPKIFGIHLFLAGVACF--GFGAFHVTGLF---GPGIWVS 169
Query: 195 DVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILT 254
D +T S + +G PF G I H+ G++ IL G++H+
Sbjct: 170 DPYGLTGRVQSVNPAWGVDGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSV 219
Query: 255 KPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+P + L + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 RPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 41.0 bits (94), Expect = 0.032
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDL 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDPDLDAQVE 491
>prf||1612384A psbB gene [Pisum sativum]
Length = 507
Score = 91.7 bits (224), Expect = 2e-17
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 40/292 (13%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG + + + GV H++ S + I+H L
Sbjct: 62 VIPFMTRLGITNSWGGWNI-TGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWLYWDL 120
Query: 139 TL--EESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GG 194
+ +E K + I GIHL L G+ F F A + G++ PG
Sbjct: 121 EIFCDER------TGKPSLDLPKIFGIHLFLAGVACF--GFGAFHVTGLF---GPGIWVS 169
Query: 195 DVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILT 254
D +T S + +G PF G I H+ G++ IL G++H+
Sbjct: 170 DPYGLTGRVQSVNPAWGVDGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSV 219
Query: 255 KPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+P + L + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 RPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 41.0 bits (94), Expect = 0.032
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDL 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDPDLDAQVE 491
>sp|P24065|PSBB_WHEAT PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||S14140 photosystem II chlorophyll a-binding protein psbB - wheat
chloroplast
emb|CAA38541.1| (X54749) chlorophyll a-binding protein CP47 [Triticum aestivum]
Length = 508
Score = 91.7 bits (224), Expect = 2e-17
Identities = 78/290 (26%), Positives = 127/290 (42%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLAVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG V + + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITDSWGGWSIS-GGTVTNPGIWSYEGVAGTHIVFSGLCFLAAIWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
+ K + I GIHL L G+ F F A + G+Y PG D
Sbjct: 121 EIFSD----ERTGKPSLDLPKIFGIHLFLAGVACF--GFGAFHVTGLY---GPGIWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T + + +G PF G I H+ G++ IL G++H+ +P
Sbjct: 172 YGLTGKVQAVNPAWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ L + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 222 PQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 40.2 bits (92), Expect = 0.055
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y + LG + + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRSQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDPDLDVQVE 491
>sp|P09447|PSBB_SECCE PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||S01385 photosystem II chlorophyll a-binding protein psbB - rye chloroplast
emb|CAA30519.1| (X07672) psbB protein (AA 1-508) [Secale cereale]
Length = 508
Score = 91.7 bits (224), Expect = 2e-17
Identities = 78/290 (26%), Positives = 127/290 (42%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLAVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG V + + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITDSWGGWSIS-GGTVTNPGIWSYEGVAGTHIVFSGLCFLAAIWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
+ K + I GIHL L G+ F F A + G+Y PG D
Sbjct: 121 EIFSD----ERTGKPSLDLPKIFGIHLFLAGVACF--GFGAFHVTGLY---GPGIWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
+T + + +G PF G I H+ G++ IL G++H+ +P
Sbjct: 172 YGLTGKVQAVNPAWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ L + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 222 PQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 41.0 bits (94), Expect = 0.032
Identities = 20/73 (27%), Positives = 29/73 (39%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y + LG + + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRSQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDPDLDAQVE 491
>gi|11465509 unknown; Photosystem II p680 chlorophyll A apoprotein (CP-47)
[Cyanidium caldarium]
sp|O19928|PSBB_CYACA PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||T11996 Photosystem II p680 chlorophyll A apoprotein (CP-47) - red alga
(Cyanidium caldarium) chloroplast
gb|AAB82661.1| (AF022186) unknown; Photosystem II p680 chlorophyll A apoprotein
(CP-47) [Cyanidium caldarium]
Length = 509
Score = 91.3 bits (223), Expect = 2e-17
Identities = 80/296 (27%), Positives = 129/296 (43%), Gaps = 54/296 (18%)
Query: 35 WWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLP 90
W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P
Sbjct: 5 WYRVHTVVLNDPGRLISVHLMHTALVSGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMP 64
Query: 91 HLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYH-------AL 134
+A L GW + G V + + GV H++ S +L I+H
Sbjct: 65 FMARLGVTDSWGGWSI-TGESVSNPGLWSFEGVALTHIVLSGLLFLASIWHWVYWDLDLF 123
Query: 135 LGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGG 194
P TLE + + + GIHL+L + F FG + T G G
Sbjct: 124 RDPRTLEPAL-----------DLPKVFGIHLVLSSLLCF-------GFGAFHVTGLFGPG 165
Query: 195 ----DVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIW 250
D +T S + +G +PF G I H+ G++ IL G++
Sbjct: 166 IWISDAYGLTGRIQSVAPAWGPEGFNPFNPGG----------IASHHIAAGTVGILAGVF 215
Query: 251 HILTKPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
H+ +P RAL + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 216 HLNVRPPQRLYRALRMGNIETVLSSSIAAVFFASFVVSGTMWYGAASTPIELFGPT 271
Score = 35.2 bits (79), Expect = 1.9
Identities = 16/54 (29%), Positives = 20/54 (36%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGR 447
+Y A G + + + V SPR W H F GHLWH R
Sbjct: 419 KYARKAQFGEVFEFDRTILDSDGVFRSSPRGWFTFGHANFALLFFFGHLWHGSR 472
>gi|11467217 PSII 47KDa protein [Zea mays]
sp|P05641|PSBB_MAIZE PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||QJZMBB photosystem II chlorophyll a-binding protein psbB - maize
chloroplast
emb|CAA28997.1| (X05422) psbB [Zea mays]
emb|CAA60311.1| (X86563) PSII 47KDa protein [Zea mays]
Length = 508
Score = 90.9 bits (222), Expect = 3e-17
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 40/292 (13%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG V + + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITNSWGGWSIS-GGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 139 TL--EESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GG 194
+ +E K + I GIHL L G+ F F A + G+Y PG
Sbjct: 121 EIFCDER------TGKPSLDLPKIFGIHLFLAGVACF--GFGAFHVTGLY---GPGIWVS 169
Query: 195 DVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILT 254
D +T + + +G PF G I H+ G++ IL G++H+
Sbjct: 170 DPYGLTGKVQAVNPAWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSV 219
Query: 255 KPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+P + L + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 RPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 42.2 bits (97), Expect = 0.014
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDPDLDAQVE 491
>gi|11466815 PSII 47kDa protein [Oryza sativa]
sp|P12157|PSBB_ORYSA PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||QJRZ6A photosystem II chlorophyll a-binding protein psbB - rice
chloroplast
emb|CAA33973.1| (X15901) PSII 47kDa protein [Oryza sativa]
prf||1603356BH photosystem II 47kD protein [Oryza sativa]
Length = 508
Score = 90.9 bits (222), Expect = 3e-17
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 40/292 (13%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG V + + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITNSWGGWSIS-GGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDL 120
Query: 139 TL--EESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GG 194
+ +E K + I GIHL L G+ F F A + G+Y PG
Sbjct: 121 EIFCDER------TGKPSLDLPKIFGIHLFLAGVACF--GFGAFHVTGLY---GPGIWVS 169
Query: 195 DVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILT 254
D +T + + +G PF G I H+ G++ IL G++H+
Sbjct: 170 DPYGLTGKVQAVNPAWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSV 219
Query: 255 KPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+P + L + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 RPPQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 40.6 bits (93), Expect = 0.042
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 2/71 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAA 453
+Y + LG + + + + V SPR W H F GH+WH AR A
Sbjct: 419 KYARRSQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHG--ARTLFA 476
Query: 454 GFEKGIDRDFE 464
GID D +
Sbjct: 477 DVFAGIDPDLD 487
>gb|AAG26305.1| (AF123857) photosystem II CP47 protein [Trochodendron aralioides]
Length = 494
Score = 90.5 bits (221), Expect = 4e-17
Identities = 116/500 (23%), Positives = 184/500 (36%), Gaps = 107/500 (21%)
Query: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL------- 95
G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 3 GRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWG 62
Query: 96 GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPFFGYVW 151
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 63 GWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER------TG 115
Query: 152 KDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSPSII 209
K + I GIHL L G+ F F A + G+Y PG D +T S +
Sbjct: 116 KPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQSVNPA 170
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-VWSG 268
+G PF G I H+ G++ IL G++H+ +P + L + +
Sbjct: 171 WGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNI 220
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQA--------QAFTFLVR 320
E LS S+AA+ F+ +W+ + P E +GPT + Q + T L
Sbjct: 221 ETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVGTGLAE 280
Query: 321 DQRLGANVGSAQGPTGLGKYLMRSPTGEVIFGGETMRFWD-LRAPWL-EPL-RGPNGLDL 377
+Q L Y+ +P +F +M D + WL P+ R G +L
Sbjct: 281 NQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGREL 340
Query: 378 --SRLKKDIQPWQ----------------ERRSAEYMTHAPLGSLNSVGGVATEINAVNY 419
R+ + + R ++Y ++ GG E+N V+Y
Sbjct: 341 FVRRMPTFFETFPVVLVDGNGIVRADVPFRRAESKYSVEQVGVTVEFYGG---ELNGVSY 397
Query: 420 VSP---------------------------------RSWLATSHFVLGFFLFVGHLWHAG 446
P R W H F GH+WH
Sbjct: 398 SDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGA 457
Query: 447 RA--RAAAAGFEKGIDRDFE 464
R R AG + +D E
Sbjct: 458 RTLFRDVFAGIDPDLDAQVE 477
>gb|AAG26269.1| (AF123848) photosystem II CP47 protein [Cercidiphyllum japonicum]
Length = 493
Score = 90.5 bits (221), Expect = 4e-17
Identities = 119/502 (23%), Positives = 188/502 (36%), Gaps = 111/502 (22%)
Query: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL------- 95
G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 2 GRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWG 61
Query: 96 GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPFFGYVW 151
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 62 GWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER------TG 114
Query: 152 KDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSPSII 209
K + I GIHL L G+ F F A + G+Y PG D +T S +
Sbjct: 115 KPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQSVNPA 169
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-VWSG 268
+G PF G I H+ G++ IL G++H+ +P + L + +
Sbjct: 170 WGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNI 219
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
E LS S+AA+ F+ +W+ + P E +GPT + Q + R R+GA +
Sbjct: 220 ETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYR--RVGAGL 277
Query: 329 GSAQG--------PTGLG--KYLMRSPTGEVIFGGETMRFWD-LRAPWL-EPL-RGPNGL 375
Q P L Y+ +P +F +M D + WL P+ R G
Sbjct: 278 AENQSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDKEGR 337
Query: 376 DL--SRLKKDIQPWQ----------------ERRSAEYMTHAPLGSLNSVGGVATEINAV 417
+L R+ + + R ++Y ++ GG E+N V
Sbjct: 338 ELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGG---ELNGV 394
Query: 418 NYVSP---------------------------------RSWLATSHFVLGFFLFVGHLWH 444
+Y P R W H F GH+WH
Sbjct: 395 SYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWH 454
Query: 445 AGRA--RAAAAGFEKGIDRDFE 464
R R AG + +D E
Sbjct: 455 GARTLFRDVFAGIDPDLDAQVE 476
>gi|11466350 CP47 chlorophyll apoprotein of photosystem II [Mesostigma viride]
gb|AAF43794.1|AF166114_6 (AF166114) CP47 chlorophyll apoprotein of photosystem II
[Mesostigma viride]
Length = 508
Score = 90.1 bits (220), Expect = 5e-17
Identities = 81/290 (27%), Positives = 128/290 (43%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H GL+ WAG+M +E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLISVHIMHTGLVSGWAGSMAFYELAVFDPSDPVLNPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
+LP + L GW + G + D + GV H+I + ++ ++H +
Sbjct: 62 VLPFMTRLGISKSWGGWDIN-GDSITDPGLWSYEGVAATHIILAGLMFLASMWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
L P G K + I GIHL L G+ F F A + G++ PG D
Sbjct: 121 ELFRD-PRTG---KPALDLPKIFGIHLFLSGLLCF--GFGAFHVTGLF---GPGIWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP 256
IT +G PF G I H+ G + IL G++H+ +P
Sbjct: 172 YGITGRVQPIEPSWGADGFDPFNPGG----------IASHHIAAGILGILAGLFHLSVRP 221
Query: 257 FAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+AL + + E LS S+AA+ F+ +W+ + A P E +GPT
Sbjct: 222 SFRLYKALRMGNVETVLSSSIAAVFWAAFVVSGTMWYGSAATPIELFGPT 271
Score = 41.8 bits (96), Expect = 0.019
Identities = 21/73 (28%), Positives = 28/73 (37%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRAQLGEIFEFDRARLKSDGVFRSSPRGWFTFGHLCFALLFFFGHIWHGARTIFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDPDLDEQVE 491
>pir||QJSP6A photosystem II chlorophyll a-binding protein psbB - spinach
chloroplast
Length = 508
Score = 89.7 bits (219), Expect = 7e-17
Identities = 76/290 (26%), Positives = 124/290 (42%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG + D + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITNSWGGWSI-TGGTITDPSIWSYEGVAGAHIMFSGLCFLAAIWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
+ K + I GIHL L G+ F F A + G+Y PG D
Sbjct: 121 EIFSD----ERTGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI-LTK 255
+T +G PF G I H+ G++ IL G++H+ +
Sbjct: 172 YGLTGKVQPVCSAWGVEGFDPFVPRG----------IASHHIAAGTLGILAGLFHLSVRS 221
Query: 256 PFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
P + + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 222 PQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 40.6 bits (93), Expect = 0.042
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGSRTLFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDPDLDVQVE 491
>sp|P04160|PSBB_SPIOL PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
emb|CAA26691.1| (X02945) P(680) apoprotein [Spinacia oleracea]
Length = 508
Score = 89.7 bits (219), Expect = 7e-17
Identities = 76/290 (26%), Positives = 124/290 (42%), Gaps = 36/290 (12%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPE 138
++P + L GW + GG + D + GV H++ S + I+H +
Sbjct: 62 VIPFMTRLGITNSWGGWSI-TGGTITDPSIWSYEGVAGAHIMFSGLCFLAAIWHWVYWDL 120
Query: 139 TLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDV 196
+ K + I GIHL L G+ F F A + G+Y PG D
Sbjct: 121 EIFSD----ERTGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDP 171
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHI-LTK 255
+T +G PF G I H+ G++ IL G++H+ +
Sbjct: 172 YGLTGKVQPVCSAWGVEGFDPFVPRG----------IASHHIAAGTLGILAGLFHLSVRS 221
Query: 256 PFAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
P + + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 222 PQRLYKGLRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 271
Score = 40.6 bits (93), Expect = 0.042
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGSRTLFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDPDLDVQVE 491
>gi|11467830 CP47 chlorophyll apoprotein of photosystem II [Nephroselmis
olivacea]
gb|AAD54852.1|AF137379_75 (AF137379) CP47 chlorophyll apoprotein of photosystem II
[Nephroselmis olivacea]
Length = 508
Score = 89.3 bits (218), Expect = 9e-17
Identities = 82/289 (28%), Positives = 124/289 (42%), Gaps = 34/289 (11%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E++ F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLIAVHLMHTALVSGWAGSMALYEISVFDPSDPVLNPMWRQGMF 61
Query: 88 LLPHLATLG----WG----VGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPET 139
++P + LG WG G + Y H++ S L I+H +
Sbjct: 62 VIPFMTRLGVTKSWGGWSITGESVSNPGIWSYEGVATAHILLSGALFMAAIWHWVFWDLE 121
Query: 140 LEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVR 197
L P G D K I GIHL L G+ F F A + G+Y PG D
Sbjct: 122 LFRD-PRTGEPALDLPK---IFGIHLFLSGLLCF--GFGAFHVTGLY---GPGIWVSDPY 172
Query: 198 KITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPF 257
IT +G PF G I H+ G + IL G++H+ +P
Sbjct: 173 GITGSVQPVEPAWGPEGFDPFNPGG----------IASHHIAAGILGILAGLFHLSVRPP 222
Query: 258 AWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+AL + + E LS S+AA+ F+ +W+ + A P E +GPT
Sbjct: 223 QRLYKALRMGNVETVLSSSIAAVFWAAFVVSGTMWYGSAATPIELFGPT 271
Score = 40.6 bits (93), Expect = 0.042
Identities = 21/73 (28%), Positives = 28/73 (37%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LGS+ + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRAQLGSVFEFDRATLQSDGVFRSSPRGWFTFGHLWFALLFFFGHIWHGARTIFRDV 478
Query: 452 AAGFEKGIDRDFE 464
G + +D E
Sbjct: 479 FGGIDPDLDDQVE 491
>gb|AAG26301.1| (AF123856) photosystem II CP47 protein [Saururus cernuus]
Length = 498
Score = 88.5 bits (216), Expect = 2e-16
Identities = 118/505 (23%), Positives = 191/505 (37%), Gaps = 107/505 (21%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 2 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 61
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 62 TNSWGGWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER--- 117
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T
Sbjct: 118 ---TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQ 169
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
+ + +G PF G I H+ G++ IL G++H+ +P + L
Sbjct: 170 AVNPAWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGL 219
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVR--D 321
+ + E LS S+AA+ F+ +W+ + P E +GPT + Q + R D
Sbjct: 220 RMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYRRVD 279
Query: 322 QRLGANVGSAQG----PTGLG--KYLMRSPTGEVIFGGETMRFWD-LRAPWL-EPL-RGP 372
L N+ ++ P L Y+ +P +F +M D + WL P+ R
Sbjct: 280 AGLAENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPIFRDK 339
Query: 373 NGLDL--SRLKKDIQPWQ----------------ERRSAEYMTHAPLGSLNSVGGVATEI 414
G +L R+ + + R ++Y ++ GG E+
Sbjct: 340 EGHELFVRRMPTFFETFPVVLVDGDGIVRADVPFRRAESKYSVEQVGVTVEFYGG---EL 396
Query: 415 NAVNYVSP---------------------------------RSWLATSHFVLGFFLFVGH 441
N V+Y P R W H F GH
Sbjct: 397 NGVSYSDPATVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGH 456
Query: 442 LWHAGRA--RAAAAGFEKGIDRDFE 464
+WH R R AG + +D E
Sbjct: 457 IWHGARTLFRDVFAGIDPDLDAQVE 481
>gb|AAG26257.1| (AF123845) photosystem II CP47 protein [Cabomba caroliniana]
Length = 495
Score = 87.8 bits (214), Expect = 3e-16
Identities = 79/280 (28%), Positives = 123/280 (43%), Gaps = 40/280 (14%)
Query: 44 NLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL---- 95
N G+LL H+ H L+ WAG+M L+E+A F P PM+ QGL ++P + L
Sbjct: 1 NDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGLFVIPFMTRLGITN 60
Query: 96 ---GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPFFG 148
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 61 SWGGWSI-TGGTITNPGIWSYEGVAGAHIMLSGLCFLAAIWHWVYWDLEIFCDER----- 114
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSP 206
K + I GIHL L G+ F F A + G+Y PG D +T
Sbjct: 115 -TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQPV 168
Query: 207 SIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-V 265
S +G PF G I H+ G++ IL G++H+ +P +AL +
Sbjct: 169 SPAWGAEGFDPFSPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKALRM 218
Query: 266 WSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 219 GNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 258
Score = 41.8 bits (96), Expect = 0.019
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 406 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDV 465
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 466 FAGIDPDLDLQVE 478
>sp|P37255|PSBB_CHLRE PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||T07985 photosystem II reaction centers CP47 apoprotein - Chlamydomonas
reinhardtii chloroplast
gb|AAA84154.1| (M84022) photosystem II reaction centers CP47 apoprotein
[Chlamydomonas reinhardtii]
prf||1905418A psbB gene [Chlamydomonas reinhardtii]
Length = 508
Score = 87.8 bits (214), Expect = 3e-16
Identities = 81/289 (28%), Positives = 122/289 (42%), Gaps = 34/289 (11%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + +IN G+L+ H+ H L+ WAG+M LFE++ F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVINDPGRLISVHLMHTALVSGWAGSMALFEISVFDPSDPVLNPMWRQGMF 61
Query: 88 LLPHLATLGWGVGPGGEVID--------TFPYFVSGVLHLISSAVLGFGGIYHALLGPET 139
+LP + LG GG I + Y H+I S L ++H
Sbjct: 62 VLPFMTRLGITQSWGGWTISGETATNPGIWSYEGVAAAHIILSGALFLASVWHWTYWDLE 121
Query: 140 LEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVR 197
L P G D K I GIHL L G+ F F A + G++ PG D
Sbjct: 122 LFRD-PRTGKTALDLPK---IFGIHLFLSGLLCF--GFGAFHVTGVF---GPGIWVSDPY 172
Query: 198 KITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPF 257
+T + +G P+ G I H+ G + +L G++H+ +P
Sbjct: 173 GLTGRVQPVAPSWGADGFDPYNPGG----------IASHHIAAGILGVLAGLFHLCVRPS 222
Query: 258 AWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
L + S E LS S+AA+ F+ +W+ + A P E +GPT
Sbjct: 223 IRLYFGLSMGSIETVLSSSIAAVFWAAFVVAGTMWYGSAATPIELFGPT 271
Score = 39.1 bits (89), Expect = 0.12
Identities = 21/73 (28%), Positives = 28/73 (37%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARKAQLGEIFEFDRSTLQSDGVFRSSPRGWFTFGHVCFALLFFFGHIWHGARTIFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + I+ E
Sbjct: 479 FAGIDDDINDQVE 491
>gi|11466728 psbB [Marchantia polymorpha]
sp|P06412|PSBB_MARPO PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||QJLV6A photosystem II chlorophyll a-binding protein psbB - liverwort
(Marchantia polymorpha) chloroplast
emb|CAA28110.1| (X04465) psbB [Marchantia polymorpha]
Length = 508
Score = 87.8 bits (214), Expect = 3e-16
Identities = 78/289 (26%), Positives = 126/289 (42%), Gaps = 34/289 (11%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLIAVHLMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATLG----W-GVGPGGEVIDT---FPYFVSGVLHLISSAVLGFGGIYHALLGPET 139
++P + LG W G GE + + Y +H++ S +L I+H +
Sbjct: 62 VIPFMTRLGITKSWGGWSITGETVTNAGIWSYEGVAAVHIVLSGLLFLAAIWHWVYWDLE 121
Query: 140 LEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVR 197
L K + I GIHL L G+ F F A + G++ PG D
Sbjct: 122 LFRD----ERTGKPSLDLPKIFGIHLFLSGVLCF--AFGAFHVTGLF---GPGIWISDPY 172
Query: 198 KITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPF 257
+T + +G PF G I H+ G + IL G++H+ +P
Sbjct: 173 GLTGKVQPVAPAWGAEGFDPFVPGG----------IASHHIAAGILGILAGLFHLSVRPP 222
Query: 258 AWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ L + + E LS S+AA+ F+ +W+ + A P E +GPT
Sbjct: 223 QRLYKGLRMGNVETVLSSSIAAVFFAAFVVAGTMWYGSAATPIELFGPT 271
Score = 41.4 bits (95), Expect = 0.025
Identities = 21/73 (28%), Positives = 28/73 (37%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRAQLGEIFEFDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDPDLDAQVE 491
>gb|AAG44370.1| (AF235042) CP47 protein [Amborella trichopoda]
Length = 498
Score = 87.0 bits (212), Expect = 5e-16
Identities = 79/282 (28%), Positives = 125/282 (44%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 2 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPILDPMWRQGMFVIPFMTRLGI 61
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + GG V + + GV H++ S + I+H + + +E
Sbjct: 62 TNSWGGWSI-TGGTVTNPGIWSYEGVAGAHIVFSGLCFLASIWHWVYWDLEIFCDER--- 117
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T
Sbjct: 118 ---TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQ 169
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
S + +G PF G I H+ G++ IL G++H+ +P + L
Sbjct: 170 SVNPAWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGL 219
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ FI +W+ + P E +GPT
Sbjct: 220 RMGNIETVLSSSIAAVFFAAFIVAGTMWYGSATTPIELFGPT 261
Score = 41.4 bits (95), Expect = 0.025
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 409 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDV 468
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 469 FAGIDPDLDAQVE 481
>gb|AAG26293.1| (AF123854) photosystem II CP47 protein [Lactoris fernandeziana]
Length = 498
Score = 86.6 bits (211), Expect = 6e-16
Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 2 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 61
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 62 TNSWGGWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER--- 117
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T
Sbjct: 118 ---TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHLTGLY---GPGIWVSDPYGLTGKVQ 169
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
S + +G PF G I H+ G++ IL G++H+ +P + L
Sbjct: 170 SVNPAWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGL 219
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 RMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 261
Score = 41.4 bits (95), Expect = 0.025
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 409 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDV 468
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 469 FAGIDPDLDAQVE 481
>gb|AAF82666.1| (AF188851) photosystem II CP47 protein [Nymphaea odorata]
Length = 498
Score = 86.6 bits (211), Expect = 6e-16
Identities = 80/284 (28%), Positives = 129/284 (45%), Gaps = 44/284 (15%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 2 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 61
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + GG V + + GV H++ S + I+H + + +E
Sbjct: 62 TNSWGGWSI-TGGTVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER--- 117
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLT- 203
K + I GIHL L G+ F F A + G+Y PG D +T
Sbjct: 118 ---TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQ 169
Query: 204 -LSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARR 262
++PS +G EG+ V I H+ G++ IL G++H+ +P +
Sbjct: 170 PVNPS----------WGAEGFDPFVPG--GIASHHIAAGTLGILAGLFHLSVRPPQRLYK 217
Query: 263 AL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
AL + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 218 ALRMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 261
Score = 41.4 bits (95), Expect = 0.025
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 409 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDV 468
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 469 FAGIDPDLDAQVE 481
>gb|AAF72604.1| (AF222703) photosystem II apoprotein [Huperzia squarrosa]
Length = 462
Score = 86.6 bits (211), Expect = 6e-16
Identities = 80/280 (28%), Positives = 125/280 (44%), Gaps = 36/280 (12%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QGL ++P + L
Sbjct: 3 VLNDPGRLIAVHLMHTALVSGWAGSMALYELAVFDPSDPILDPMWRQGLFVVPFMTRLGI 62
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
GW + G V D + GV H++ S + I+H + L P G
Sbjct: 63 TKSWGGWSI-TGETVSDAGVWSYEGVAAAHIVLSGLFFLAAIWHWVFWDLDLFRD-PRTG 120
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSP 206
K + I GIHL L G+ F F A + G++ PG D +T
Sbjct: 121 ---KPTLDLPKIFGIHLFLSGVLCF--GFGAFHVTGLF---GPGIWVSDPYGLTGKVQPV 172
Query: 207 SIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-V 265
+ ++G PF G I H+ G + IL G++H+ +P +AL +
Sbjct: 173 APVWGAEGFDPFVPGG----------IASHHIAAGILGILAGLFHLSVRPPQRLYKALRM 222
Query: 266 WSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ E LS S+AA+ F+ +W+ + A P E +GPT
Sbjct: 223 GNIETVLSSSIAAVFFAAFVVAGTMWYGSAATPIELFGPT 262
Score = 35.6 bits (80), Expect = 1.4
Identities = 15/51 (29%), Positives = 20/51 (38%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + V SPR W H F GH+WH
Sbjct: 410 KYARRAQLGEIFESDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWH 460
>gb|AAG26273.1| (AF123849) photosystem II CP47 protein [Dioscorea bulbifera]
Length = 494
Score = 86.2 bits (210), Expect = 8e-16
Identities = 116/503 (23%), Positives = 188/503 (37%), Gaps = 113/503 (22%)
Query: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL------- 95
G+LL H+ H + WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 3 GRLLSVHIMHTAXVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWG 62
Query: 96 GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPFFGYVW 151
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 63 GWSIS-GGSITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER------TG 115
Query: 152 KDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSPSII 209
K + I GIHL L G+ F F A + G+Y PG D +T S +
Sbjct: 116 KPSLDLPKIFGIHLFLSGLACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQSINPA 170
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-VWSG 268
+G PF G I H+ G++ IL G++H+ +P + L + +
Sbjct: 171 WGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNI 220
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRLGANV 328
E LS S+AA+ F+ +W+ + P E +GPT + Q + R R+GA +
Sbjct: 221 ETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPTRYQWDQGYFQQEIYR--RVGAGL 278
Query: 329 GS--------AQGPTGLG--KYLMRSPTGEVIFGGETMRFWD-LRAPWL--EPLRGPNG- 374
++ P L Y+ +P +F +M D + WL R G
Sbjct: 279 AENLSLSEAWSKIPEKLAFYDYIGNNPAKGGLFRAGSMDNGDGIAVGWLGHPVFRDKEGR 338
Query: 375 ------------------LDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINA 416
+D+ + + P++ R ++Y ++ GG E+N
Sbjct: 339 ELFVRRMPTFFETFPVVLVDVDGIVRADVPFR-RAESKYSVEQVGVTVEFYGG---ELNG 394
Query: 417 VNYVSP---------------------------------RSWLATSHFVLGFFLFVGHLW 443
V+Y P R W H F GH+W
Sbjct: 395 VSYSDPTTVKKYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIW 454
Query: 444 HAGRA--RAAAAGFEKGIDRDFE 464
H R R AG + +D E
Sbjct: 455 HGARTLFRDVFAGIDPDLDAQVE 477
>gb|AAG26265.1| (AF123847) photosystem II CP47 protein [Ceratophyllum demersum]
Length = 498
Score = 86.2 bits (210), Expect = 8e-16
Identities = 78/282 (27%), Positives = 125/282 (43%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 2 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 61
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 62 TNSWGGWSI-TGGTITNPGLWSYEGVAGAHIMFSGLCFLAAIWHWVYWDLEIFCDER--- 117
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T
Sbjct: 118 ---TGKPSLDLPKIFGIHLFLSGLACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQ 169
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
S S +G PF G I H+ G++ IL G++H+ +P + L
Sbjct: 170 SVSPAWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGL 219
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 RMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 261
Score = 41.4 bits (95), Expect = 0.025
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 409 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDV 468
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 469 FAGIDPDLDAQVE 481
>gb|AAF72611.1| (AF222710) photosystem II apoprotein [Pisum sativum]
Length = 453
Score = 86.2 bits (210), Expect = 8e-16
Identities = 76/282 (26%), Positives = 125/282 (43%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 2 VLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 61
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 62 TNSWGGWNI-TGGTITNPGIWSYEGVAAAHIVFSGLCFLAAIWHWVYWDLEIFCDER--- 117
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G++ PG D +T
Sbjct: 118 ---TGKPSLDLPKIFGIHLFLAGVACF--GFGAFHVTGLF---GPGIWVSDPYGLTGRVQ 169
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
S + +G PF G I H+ G++ IL G++H+ +P + L
Sbjct: 170 SVNPAWGVEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGL 219
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 RMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 261
>gb|AAF72610.1| (AF222709) photosystem II apoprotein [Chloranthus spicatus]
Length = 453
Score = 86.2 bits (210), Expect = 8e-16
Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 3 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 62
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 63 NNSWGGWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER--- 118
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T
Sbjct: 119 ---TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQ 170
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
S + +G PF G I H+ G++ IL G++H+ +P + L
Sbjct: 171 SVNPTWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGL 220
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 221 RMGNIETVLSSSIAAVLFAAFVVAGTMWYGSATTPIELFGPT 262
>pir||S07546 photosystem II chlorophyll a-binding protein psbB - Euglena
gracilis chloroplast
emb|CAA34016.1| (X15903) chlorophyl A apoprotein (51Kd) photosystem II [Euglena
gracilis]
Length = 508
Score = 86.2 bits (210), Expect = 8e-16
Identities = 79/292 (27%), Positives = 129/292 (44%), Gaps = 40/292 (13%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLISVHLMHTALVSGWAGSMALYELAIFDPSDVALNPMWRQGMF 61
Query: 88 LLPHLATLG----WG----VGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPET 139
+LP + LG WG G + Y V H+I S +L I+H +
Sbjct: 62 VLPFMTRLGVTKSWGAWSVTGESFSDPGIWSYEGVAVAHIILSGLLFLAAIWHWVYWDLD 121
Query: 140 LEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVR 197
L P G + D + + G+HL L GA L F + G++ PG D
Sbjct: 122 LFRD-PASGELKLD---LPRVFGVHLFL--SGALCLAFGVFHVTGVF---GPGIWVSDPY 172
Query: 198 KITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP- 256
++ + P I +G EG+ ++ I H+ G + ++ G +H+L +P
Sbjct: 173 GLSG-KIEPVI-------PSWGAEGF--DPYNVGGIASHHIAAGLLGLIAGGFHVLVRPS 222
Query: 257 ---FAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
F R + E LS S+AA+ F+ +W+ + + P E +GPT
Sbjct: 223 QRLFVLLRMGNI---ETVLSSSIAAVFWSAFVVSGTMWYGSASTPIELFGPT 271
Score = 42.6 bits (98), Expect = 0.011
Identities = 20/72 (27%), Positives = 29/72 (39%), Gaps = 2/72 (2%)
Query: 395 YMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAAA 452
Y HA LG + + + V SPR W H F GH+WH R +
Sbjct: 420 YARHAQLGEIFDFNRSILQSDGVFRSSPRGWFTFGHLSFALIFFFGHIWHGARTLFKYLL 479
Query: 453 AGFEKGIDRDFE 464
AG + ++ + E
Sbjct: 480 AGIDPDLEEEIE 491
>gb|AAF72599.1| (AF222698) photosystem II apoprotein [Adiantum capillus-veneris]
Length = 461
Score = 85.8 bits (209), Expect = 1e-15
Identities = 81/308 (26%), Positives = 129/308 (41%), Gaps = 52/308 (16%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATLGW 97
++N G+L+ H+ H L+ WAG+M +E+A F P PM+ QG+ ++P + +G
Sbjct: 2 VLNDPGRLISVHLMHTALVSGWAGSMASYELAVFDPSDPVLDPMWRQGMFVIPFMTRIGV 61
Query: 98 GVGPGGEVI--DT------FPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGY 149
GG +I DT + Y H+I S +L I+H + L
Sbjct: 62 SKSWGGWIITGDTSTDAGIWSYEGVAAAHIILSGLLFLAAIWHWVYWDLDLFRD----DR 117
Query: 150 VWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSII 209
K + I GIHL L G+ F F A + G++
Sbjct: 118 TGKPSLDLPKIFGIHLFLSGVLCF--SFGAFHVTGLFGP--------------------- 154
Query: 210 FGYLLKSPFGGEGWIVSVD------DLEDIIGG-----HVWLGSICILGGIWHILTKPFA 258
G + P+G G + VD + I G H+ G + IL G++H+ +P
Sbjct: 155 -GIWISDPYGLTGKVEPVDPAWGAEGFDPFIPGGIASHHIAAGVLGILAGLFHLSVRPPQ 213
Query: 259 WARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTF 317
+AL + + E LS S+AA+ F+ +W+ + A P E +GPT + Q
Sbjct: 214 RLYKALRMGNVETVLSSSIAAVFFAAFVVSGTMWYGSAATPIELFGPTRYQWDQGYFQQE 273
Query: 318 LVRDQRLG 325
+ R RLG
Sbjct: 274 IERRIRLG 281
Score = 36.0 bits (81), Expect = 1.1
Identities = 15/51 (29%), Positives = 20/51 (38%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + V SPR W H F GH+WH
Sbjct: 409 KYARRAQLGEIFEFDRATLKSDGVFRSSPRGWFTFGHTTFALIFFFGHIWH 459
>gb|AAF72597.1| (AF222696) photosystem II apoprotein [Equisetum palustre]
Length = 462
Score = 85.8 bits (209), Expect = 1e-15
Identities = 80/284 (28%), Positives = 126/284 (44%), Gaps = 44/284 (15%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + +
Sbjct: 3 VLNDPGRLLAVHLMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRIGI 62
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
GW + G V D + GV H+I S +L I+H + L
Sbjct: 63 TKSWGGWSI-TGETVTDAGIWSYEGVAAAHIILSGLLFLSAIWHWVYWDLELFRD----E 117
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIY--DTWA--PGG--GDVRKITNL 202
K + I G+HL L G+ F F A + G++ W P G G+VR +
Sbjct: 118 RTGKPSLDLPKIFGVHLFLSGVLCF--GFGAFHVTGLFGPGIWVSDPYGLTGNVRPV--- 172
Query: 203 TLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARR 262
+G +G+ V I H+ G + IL G++H+ +P +
Sbjct: 173 ------------DPAWGADGFDPFVPG--GIASHHIAAGILGILAGLFHLSVRPPQRLYK 218
Query: 263 AL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
AL + + E LS S+AA+ F+ +W+ + A P E YGPT
Sbjct: 219 ALRMGNIETVLSSSIAAVFFAAFVVSGTMWYGSAATPIELYGPT 262
Score = 34.8 bits (78), Expect = 2.4
Identities = 14/51 (27%), Positives = 20/51 (38%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y + LG + + + V SPR W H F GH+WH
Sbjct: 410 KYARRSQLGEIFEFDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWH 460
>gi|11467517 PSII, CP47 chlorophyll apoprotein [Odontella sinensis]
sp|P49471|PSBB_ODOSI PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||S78322 photosystem II chlorophyll a-binding protein psbB - Odontella
sinensis chloroplast
emb|CAA91695.1| (Z67753) PSII, CP47 chlorophyll apoprotein [Odontella sinensis]
Length = 509
Score = 85.8 bits (209), Expect = 1e-15
Identities = 82/287 (28%), Positives = 125/287 (42%), Gaps = 36/287 (12%)
Query: 35 WWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLP 90
W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P
Sbjct: 5 WYRVHTVVLNDPGRLIAVHLMHTALVAGWAGSMALYELAVFDPSDPVLNPMWRQGMFVMP 64
Query: 91 HLATL-------GWGVGPGGEVIDTFPYFVSGVL--HLISSAVLGFGGIYHALLGPETLE 141
+ L GW + G V + + GV H+I S + I+H + L
Sbjct: 65 FMTRLGITDSWGGWSI-TGESVSNPGIWSFEGVALSHIILSGMCFLAAIWHWVYWDLELF 123
Query: 142 ESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKI 199
P G D K I GIHL L G+ F F A + G++ PG D +
Sbjct: 124 RD-PRTGEPALDLPK---IFGIHLFLSGLLCF--GFGAFHVTGLF---GPGIWVSDAYGV 174
Query: 200 TNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAW 259
T + +G +PF G I H+ G I GI+H+ +P
Sbjct: 175 TGKVQPVAPAWGADGFNPFNPGG----------IAAHHIAAGIFGIFAGIFHLTVRPPQR 224
Query: 260 ARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
RAL + + E LS S+AA+ F+ +W+ A P E +GPT
Sbjct: 225 LYRALRMGNIETVLSSSIAAVFFAAFVTSGTMWYGAAATPIELFGPT 271
Score = 39.1 bits (89), Expect = 0.12
Identities = 18/54 (33%), Positives = 23/54 (42%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGR 447
++ A LG + + E + V SPR W H F GHLWH GR
Sbjct: 419 KFARKAQLGEVFEFDRTSLESDGVFRSSPRGWYTFGHANFALLFFFGHLWHGGR 472
>gb|AAF72609.1| (AF222708) photosystem II apoprotein [Drimys winteri]
Length = 462
Score = 85.4 bits (208), Expect = 1e-15
Identities = 77/282 (27%), Positives = 125/282 (44%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 3 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 62
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 63 TNSWGGWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER--- 118
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T
Sbjct: 119 ---TGKPSLDLPKIFGIHLFLSGVTCF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQ 170
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
S + +G PF G I H+ G++ IL G++H+ +P + L
Sbjct: 171 SVNPAWGTEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGL 220
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 221 RMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 262
Score = 36.7 bits (83), Expect = 0.63
Identities = 15/51 (29%), Positives = 21/51 (40%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + + V SPR W H F GH+WH
Sbjct: 410 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWH 460
>gi|7524675 PSII P680 chlorophyll A apoprotein [Pinus thunbergii]
sp|P41624|PSBB_PINTH PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||T07508 photosystem II chlorophyll a-binding protein psbB - Japanese black
pine chloroplast
dbj|BAA04386.1| (D17510) PSII P680 chlorophyll A apoprotein [Pinus thunbergii]
Length = 508
Score = 85.4 bits (208), Expect = 1e-15
Identities = 77/304 (25%), Positives = 124/304 (40%), Gaps = 64/304 (21%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLISVHIMHTALVAGWAGSMTLYELAVFDPSDPVLDPMWRQGMF 61
Query: 88 LLPHLATL-------GWGVGPGGEVID--TFPYFVSGVLHLISSAVLGFGGIYHALLGPE 138
++P + L GW + G VI+ + Y V H++ S + I+H +
Sbjct: 62 VIPFMTRLGIKDSWSGWNI-TGETVINPGIWSYEGVAVAHIVFSGLCFLAAIWHWVYWDL 120
Query: 139 TL--EESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDV 196
+ +E K + + GIHL L G+ F F A + G+Y
Sbjct: 121 DIFCDER------TGKRCLDLPKVFGIHLFLSGVACF--GFGAFHVTGLYGP-------- 164
Query: 197 RKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDL-----------EDIIGGHVWLGSICI 245
G + P+G G I VD I H+ G + I
Sbjct: 165 --------------GIWVSDPYGLTGKIQPVDPAWGAEGFDPFVPGGIASHHIAAGILGI 210
Query: 246 LGGIWHILTKP----FAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEF 301
L G++H+ +P + R + E LS S+AA+ FI +W+ + P E
Sbjct: 211 LAGLFHLSVRPPQRLYVGLRMGNI---ETVLSSSIAAVFFAAFIVAGTMWYGSATTPVEL 267
Query: 302 YGPT 305
+GPT
Sbjct: 268 FGPT 271
Score = 41.4 bits (95), Expect = 0.025
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 419 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFSGHIWHGARTLFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDSDLDDRIE 491
>gb|AAG26250.1| (AF123843) photosystem II CP47 protein [Acorus calamus]
Length = 498
Score = 85.0 bits (207), Expect = 2e-15
Identities = 77/282 (27%), Positives = 127/282 (44%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 2 VLNDPGRLLSVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 61
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 62 TNSWGGWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER--- 117
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T +
Sbjct: 118 ---TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTG-KV 168
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
P + +G EG+ V I H+ G++ IL G++H+ +P + L
Sbjct: 169 QP-------VNPAWGAEGFDPFVPG--GIASHHIAAGTLGILAGLFHLSVRPPQRLYKGL 219
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 RMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 261
Score = 41.4 bits (95), Expect = 0.025
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 409 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDV 468
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 469 FAGIDPDLDAQVE 481
>sp|P27200|PSBB_PROHO PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||QJMWPB photosystem II chlorophyll a-binding protein psbB precursor -
Prochlorothrix hollandica
emb|CAA42177.1| (X59614) CP-47 [Prochlorothrix hollandica]
Length = 514
Score = 85.0 bits (207), Expect = 2e-15
Identities = 78/297 (26%), Positives = 128/297 (42%), Gaps = 42/297 (14%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + +IN G+LL H+ H L++ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTAVINDPGRLLAVHLMHTALVLGWAGSMALYELAVFDPSDAVLNPMWRQGMF 61
Query: 88 LLPHLATLG--------------WGVGPG--GEVIDTFPYFVSGVLHLISSAVLGFGGIY 131
+LP + LG W PG + + Y ++H++ S + ++
Sbjct: 62 VLPFMTRLGVTHSWSGWTVTGEPWINEPGFLNAHFNFWSYEGVALMHIVLSGLFFLAAVW 121
Query: 132 HALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAP 191
H + L E P G D K I G HL LLG F F + GI+ P
Sbjct: 122 HWVYWDLDLFED-PRTGEPALDLPK---IFGGHLFLLGFLCF--NFGTFHLTGIF---GP 172
Query: 192 G--GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGI 249
G D +T + +G +PF G ++ H+ G ++GG+
Sbjct: 173 GMWVSDAYGLTGHIEHIAPEWGPAGFNPFNPGG----------VVAHHIAAGITLMIGGV 222
Query: 250 WHILTKPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+H+ +P AL + + E L+ ++AA+ F+ +W+ + P E +GPT
Sbjct: 223 FHLTARPPERLYTALRMGNVETALASAIAAVFGAAFVVAGTMWYGHVTTPIELFGPT 279
>gb|AAG26297.1| (AF123855) photosystem II CP47 protein [Liriodendron tulipifera]
Length = 493
Score = 84.7 bits (206), Expect = 2e-15
Identities = 76/277 (27%), Positives = 122/277 (43%), Gaps = 40/277 (14%)
Query: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL------- 95
G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 2 GRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGINNSWG 61
Query: 96 GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPFFGYVW 151
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 62 GWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER------TG 114
Query: 152 KDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSPSII 209
K + I GIHL L G+ F F A + G+Y PG D +T S +
Sbjct: 115 KPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQSVNPA 169
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-VWSG 268
+G PF G I H+ G++ IL G++H+ +P + L + +
Sbjct: 170 WGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNI 219
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 ETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 256
Score = 42.2 bits (97), Expect = 0.014
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 404 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDV 463
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 464 FAGIDPDLDAQVE 476
>gb|AAG26289.1| (AF123853) photosystem II CP47 protein [Illicium parviflorum]
Length = 494
Score = 84.7 bits (206), Expect = 2e-15
Identities = 76/277 (27%), Positives = 122/277 (43%), Gaps = 40/277 (14%)
Query: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL------- 95
G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 3 GRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWG 62
Query: 96 GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPFFGYVW 151
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 63 GWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER------TG 115
Query: 152 KDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSPSII 209
K + I GIHL L G+ F F A + G+Y PG D +T S +
Sbjct: 116 KPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQSVNPA 170
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-VWSG 268
+G PF G I H+ G++ IL G++H+ +P + L + +
Sbjct: 171 WGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNI 220
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 221 ETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 257
Score = 41.4 bits (95), Expect = 0.025
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 405 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDV 464
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 465 FAGIDPDLDAQVE 477
>gb|AAF72605.1| (AF222704) photosystem II apoprotein [Welwitschia mirabilis]
Length = 462
Score = 84.7 bits (206), Expect = 2e-15
Identities = 83/282 (29%), Positives = 124/282 (43%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATLGW 97
++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+ +LP + LG
Sbjct: 3 VLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDSVLDPMWRQGMFILPFMTRLGI 62
Query: 98 GVGPGGEVIDTFPYFVSGV--------LHLISSAVLGFGGIYHALLGPETLEESFPFFGY 149
GG I P G+ H++ S + +H + + S P G
Sbjct: 63 KESWGGWSITGEPIANPGLWSYEGVAGAHIVFSGLCFLSATWHWVYWDLEI-FSDPRTG- 120
Query: 150 VWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSII 209
K + I GIHL L G+ F F A + G+Y PG + S
Sbjct: 121 --KPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPG-----------IWVSDP 162
Query: 210 FGYLLK----SP-FGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
FG K SP +G EG+ V I HV G + I+ G++H+ +P R L
Sbjct: 163 FGLTGKIQPVSPAWGAEGFDPFVPG--GIASHHVAAGLLGIIAGLFHLSVRPPQRLYRGL 220
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ FI +W+ + P E +GPT
Sbjct: 221 RMGNIETVLSSSIAAVFFAAFIVAGTMWYGSATTPIELFGPT 262
Score = 36.7 bits (83), Expect = 0.63
Identities = 15/51 (29%), Positives = 21/51 (40%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + + V SPR W H F GH+WH
Sbjct: 410 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWH 460
>dbj|BAB18437.1| (AB044511) photosystem II CP43 apoprotein [Pandorina morum]
dbj|BAB18443.1| (AB044517) photosystem II CP43 apoprotein [Astrephomene
gubernaculifera]
Length = 42
Score = 84.3 bits (205), Expect = 3e-15
Identities = 40/42 (95%), Positives = 41/42 (97%)
Query: 307 PEASQAQAFTFLVRDQRLGANVGSAQGPTGLGKYLMRSPTGE 348
PEASQ+QAFTFLVRDQRLGANV SAQGPTGLGKYLMRSPTGE
Sbjct: 1 PEASQSQAFTFLVRDQRLGANVASAQGPTGLGKYLMRSPTGE 42
>gb|AAG26277.1| (AF123850) photosystem II CP47 protein [Drimys winteri]
Length = 494
Score = 83.9 bits (204), Expect = 4e-15
Identities = 76/277 (27%), Positives = 122/277 (43%), Gaps = 40/277 (14%)
Query: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL------- 95
G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 3 GRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWG 62
Query: 96 GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPFFGYVW 151
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 63 GWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER------TG 115
Query: 152 KDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSPSII 209
K + I GIHL L G+ F F A + G+Y PG D +T S +
Sbjct: 116 KPSLDLPKIFGIHLFLSGVTCF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQSVNPA 170
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-VWSG 268
+G PF G I H+ G++ IL G++H+ +P + L + +
Sbjct: 171 WGTEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNI 220
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 221 ETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 257
Score = 42.2 bits (97), Expect = 0.014
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 405 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDV 464
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 465 FAGIDPDLDAQVE 477
>gb|AAG26254.1| (AF123844) photosystem II CP47 protein [Asarum canadense]
Length = 498
Score = 83.9 bits (204), Expect = 4e-15
Identities = 76/282 (26%), Positives = 124/282 (43%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+ +A F P PM+ QG+ ++P + L
Sbjct: 2 VLNDPGRLLSVHIMHTALVSGWAGSMALYXLAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 61
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 62 TNSWGGWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER--- 117
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T
Sbjct: 118 ---TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTGKVQ 169
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
S + +G PF G I H+ G++ IL G++H+ +P + L
Sbjct: 170 SVNPTWGAEGFDPFVPGG----------IASHHIAAGTLGILAGLFHLSVRPPQRLYKGL 219
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 RMGNIETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 261
Score = 40.6 bits (93), Expect = 0.042
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 409 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHASFALLFFFGHIWHGARTLFRDV 468
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 469 FAGIDPDLDVQVE 481
>gb|AAF72603.1| (AF222702) photosystem II apoprotein [Ephedra tweediana]
Length = 462
Score = 83.9 bits (204), Expect = 4e-15
Identities = 84/310 (27%), Positives = 129/310 (41%), Gaps = 52/310 (16%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATLG- 96
++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+ +LP + LG
Sbjct: 3 VLNDPGRLISVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFILPFMTRLGI 62
Query: 97 ---WGVGPGGEVIDTFPYFVS--GV--LHLISSAVLGFGGIYHALLGPETLEESFPFFGY 149
WG + P F S GV H++ S + I+H + + P G
Sbjct: 63 KESWGGWSITGETEANPGFWSYEGVAGAHIVFSGLCFLSAIWHWVYWDLEIFTD-PRTG- 120
Query: 150 VWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSII 209
K + I GIHL L G+ F F A + G+Y
Sbjct: 121 --KPSLDLPKIFGIHLFLSGVVCF--GFGAFHVTGLYGP--------------------- 155
Query: 210 FGYLLKSPFGGEGWIVSV------DDLEDIIGG-----HVWLGSICILGGIWHILTKPFA 258
G + PFG G I V + + + G HV G + I+ G++H+ +P
Sbjct: 156 -GIWISDPFGLTGKIQPVSPAWGAEGFDPFVPGGIASHHVAAGLLGIIAGLFHLSVRPPQ 214
Query: 259 WARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTF 317
+ L + + E LS S+AA+ FI +W+ + P E +GPT + Q
Sbjct: 215 RLYKGLRMGNIETVLSSSIAAVFFASFIVAGTMWYGSATTPIELFGPTRYQWDQGYFQQE 274
Query: 318 LVRDQRLGAN 327
+ R R G N
Sbjct: 275 IDRRVRAGLN 284
Score = 36.7 bits (83), Expect = 0.63
Identities = 15/51 (29%), Positives = 21/51 (40%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + + V SPR W H F GH+WH
Sbjct: 410 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWH 460
>gi|11467039 PSII(CP47) polypeptide [Euglena gracilis]
sp|P14813|PSBB_EUGGR PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||S34551 photosystem II chlorophyll a-binding protein psbB - Euglena
gracilis chloroplast
emb|CAA50133.1| (X70810) PSII(CP47) polypeptide [Euglena gracilis]
Length = 508
Score = 83.9 bits (204), Expect = 4e-15
Identities = 78/292 (26%), Positives = 128/292 (43%), Gaps = 40/292 (13%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+ + H+ H L+ WAG+M L+E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRFISVHLMHTALVSGWAGSMALYELAIFDPSDVALNPMWPQGMF 61
Query: 88 LLPHLATLG----WG----VGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPET 139
+LP + LG WG G + Y V H+I S +L I+H +
Sbjct: 62 VLPFMTRLGVTKSWGAWSVTGESFSDPGIWSYEGVAVAHIILSGLLFLAAIWHWVYWDLD 121
Query: 140 LEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVR 197
L P G + D + + G+HL L GA L F + G++ PG D
Sbjct: 122 LFRD-PASGELKLD---LPRVFGVHLFL--SGALCLAFGVFHVTGVF---GPGIWVSDPY 172
Query: 198 KITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKP- 256
++ + P I +G EG+ ++ I H+ G + ++ G +H+L +P
Sbjct: 173 GLSG-KIEPVI-------PSWGAEGF--DPYNVGAIASHHIAAGLLGLIAGGFHVLVRPS 222
Query: 257 ---FAWARRALVWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
F R + E LS S+AA+ F+ +W+ + + P E +GPT
Sbjct: 223 QRLFVLLRMGNI---ETVLSSSIAAVFWSAFVVSGTMWYGSASTPIELFGPT 271
Score = 42.2 bits (97), Expect = 0.014
Identities = 20/72 (27%), Positives = 29/72 (39%), Gaps = 2/72 (2%)
Query: 395 YMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAAA 452
Y HA LG + + + V SPR W H F GH+WH R +
Sbjct: 420 YARHAQLGEIFDFNRSILQSDGVFRSSPRGWFTFGHLSFALIFFFGHIWHGARTLFKYLL 479
Query: 453 AGFEKGIDRDFE 464
AG + ++ + E
Sbjct: 480 AGIDPHLEEEIE 491
>gb|AAF72600.1| (AF222699) photosystem II apoprotein [Angiopteris evecta]
Length = 461
Score = 83.5 bits (203), Expect = 5e-15
Identities = 75/289 (25%), Positives = 120/289 (40%), Gaps = 54/289 (18%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + +
Sbjct: 2 VLNDPGRLLSVHLMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRIGI 61
Query: 96 -----GWGVGPGGEVIDTFPYFVSGVL--HLISSAVLGFGGIYHALLGPETLEESFPFFG 148
GW + G V D + GV H++ S +L I+H + L
Sbjct: 62 TKSWGGWSI-TGDTVNDAGIWSYEGVAASHIVLSGLLFLAAIWHWVYWDLDLFRD----E 116
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
K + I GIHL L G+ F F A + G++
Sbjct: 117 RTGKPSLDLPKIFGIHLFLSGVLCF--GFGAFHITGLFGP-------------------- 154
Query: 209 IFGYLLKSPFGGEGWIVSVDDL-----------EDIIGGHVWLGSICILGGIWHILTKPF 257
G + P+G G + VD I H+ G + IL G++H+ +P
Sbjct: 155 --GIWVSDPYGLTGKVQPVDPAWGAEGFDPFVPGGIASHHIAAGILGILAGLFHLSVRPP 212
Query: 258 AWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+AL + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 213 QRLYKALRMGNVETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 261
Score = 36.0 bits (81), Expect = 1.1
Identities = 15/51 (29%), Positives = 20/51 (38%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + V SPR W H F GH+WH
Sbjct: 409 KYARRAQLGEIFEFDRATLKSDGVFRSSPRGWFTFGHATFALIFFFGHIWH 459
>gi|7524847 photosystem II P680 chlorophyll A apoprotein CP-47 protein
[Chlorella vulgaris]
sp|P56307|PSBB_CHLVU PHOTOSYSTEM II P680 CHLOROPHYLL A APOPROTEIN (CP-47 PROTEIN)
pir||T07277 photosystem II chlorophyll a-binding protein psbB - Chlorella
vulgaris chloroplast
dbj|BAA57925.1| (AB001684) photosystem II P680 chlorophyll A apoprotein CP-47
protein [Chlorella vulgaris]
Length = 508
Score = 83.1 bits (202), Expect = 7e-15
Identities = 75/305 (24%), Positives = 120/305 (38%), Gaps = 66/305 (21%)
Query: 32 GFAWWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLI 87
G W+ + ++N G+L+ H+ H L+ WAG+M +E+A F P PM+ QG+
Sbjct: 2 GLPWYRVHTVVLNDPGRLIAVHLMHTSLVSGWAGSMAFYELAVFDPSDPVLNPMWRQGMF 61
Query: 88 LLPHLATLGWGVGPGGEVID--------TFPYFVSGVLHLISSAVLGFGGIYH------- 132
+LP + LG GG I + Y H++ S +L I+H
Sbjct: 62 VLPFMTRLGITQSWGGWTISGETAANPGVWSYEGVAAAHIVLSGLLFAASIWHWVYWDLE 121
Query: 133 ALLGPETLEESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG 192
P T + + I GIHL L G+ F F A + GI+
Sbjct: 122 LFRDPRTSNPAL-----------DLPKIFGIHLFLSGVLCF--GFGAFHVTGIFGP---- 164
Query: 193 GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIG-----------GHVWLG 241
G + P+G G + +V D G H+ G
Sbjct: 165 ------------------GIWVSDPYGITGTVQAVAPSWDATGFDPYNPGGISAHHIAAG 206
Query: 242 SICILGGIWHILTKPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSE 300
+ +L G++H+ +P L + + E LS S+AA+ F+ +W+ + A P E
Sbjct: 207 ILGVLAGLFHLCVRPPQRLYNGLRMGNIETVLSSSIAAVFWAAFVVSGTMWYGSAATPIE 266
Query: 301 FYGPT 305
+GPT
Sbjct: 267 LFGPT 271
Score = 43.8 bits (101), Expect = 0.005
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + V SPR W +H F GH+WH R R
Sbjct: 419 KYARRAQLGEIFEFDRATLQSDGVFRASPRGWFTFAHLCFALLFFFGHIWHGARTIFRDV 478
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 479 FAGIDADLDEQVE 491
>gb|AAG26261.1| (AF123846) photosystem II CP47 protein [Calycanthus floridus]
Length = 493
Score = 82.7 bits (201), Expect = 9e-15
Identities = 76/277 (27%), Positives = 124/277 (44%), Gaps = 40/277 (14%)
Query: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL------- 95
G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 2 GRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGITNSWG 61
Query: 96 GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPFFGYVW 151
GW + GG + + + GV H++ S + I+H + + +E
Sbjct: 62 GWSI-TGGTITNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLEIFCDER------TG 114
Query: 152 KDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSPSII 209
K + I GIHL L G+ F F A + G+Y PG D +T + P
Sbjct: 115 KPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTG-KVQP--- 165
Query: 210 FGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-VWSG 268
+ +G EG+ V I H+ G++ IL G++H+ +P + L + +
Sbjct: 166 ----VNPAWGAEGFDPFVPG--GIASHHIAAGTLGILAGLFHLSVRPPQRLYKGLRMGNI 219
Query: 269 EAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 220 ETVLSSSIAAVFFAAFVVAGTMWYGSATTPIELFGPT 256
Score = 42.2 bits (97), Expect = 0.014
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 404 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDV 463
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 464 FAGIDPDLDAQVE 476
>gb|AAF72608.1| (AF222707) photosystem II apoprotein [Psilotum nudum]
Length = 462
Score = 81.9 bits (199), Expect = 2e-14
Identities = 75/289 (25%), Positives = 121/289 (40%), Gaps = 54/289 (18%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + +
Sbjct: 3 VLNDPGRLIAVHLMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRIGI 62
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
GW + G V D + GV H+ S +L I+H + L
Sbjct: 63 TKSWGGWSI-TGDTVSDAGIWSFEGVAAAHITLSGLLFLSAIWHWVYWDLDLFRD----E 117
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSI 208
K + I GIHL L G+ F F A + G++
Sbjct: 118 RTGKPSLDLPKIFGIHLFLSGVLCF--GFGAFHITGLFGP-------------------- 155
Query: 209 IFGYLLKSPFGGEGWIVSVD------DLEDIIGG-----HVWLGSICILGGIWHILTKPF 257
G + P+G G + VD + I G H+ G + IL G++H+ +P
Sbjct: 156 --GIWISDPYGLTGKVQPVDPAWGAEGFDPFIPGGIASHHIAAGILGILAGLFHLSVRPP 213
Query: 258 AWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+AL + + E LS S+AA+ F+ +W+ + P E +GPT
Sbjct: 214 QRLYKALRMGNVETVLSSSIAAVFFAAFVVSGTMWYGSATTPIELFGPT 262
Score = 36.0 bits (81), Expect = 1.1
Identities = 15/51 (29%), Positives = 20/51 (38%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + V SPR W H F GH+WH
Sbjct: 410 KYARRAQLGEIFEFDRATLKSDGVFRSSPRGWFTFGHATFALIFFFGHIWH 460
>gb|AAF72601.1| (AF222700) photosystem II apoprotein [Encephalartos lebomboensis]
Length = 462
Score = 81.1 bits (197), Expect = 3e-14
Identities = 78/282 (27%), Positives = 125/282 (43%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 3 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 62
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + G V + + GV H++ S + I+H + + +E
Sbjct: 63 NESWGGWSI-TGETVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLDIFCDER--- 118
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T +
Sbjct: 119 ---TGKPSLDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTG-RI 169
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
P + +G EG+ V I H+ G + IL G++H+ +P + L
Sbjct: 170 QP-------VNPAWGAEGFDPFVPG--GIASHHIAAGILGILAGLFHLSVRPPQRLYKGL 220
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ FI +W+ + P E +GPT
Sbjct: 221 RMGNIETVLSSSIAAVFFAAFIVAGTMWYGSATAPVELFGPT 262
Score = 36.4 bits (82), Expect = 0.82
Identities = 15/51 (29%), Positives = 21/51 (40%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + + V SPR W H F GH+WH
Sbjct: 410 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFSGHIWH 460
>gb|AAG26285.1| (AF123852) photosystem II CP47 protein [Gnetum gnemon]
Length = 490
Score = 80.8 bits (196), Expect = 4e-14
Identities = 77/273 (28%), Positives = 118/273 (43%), Gaps = 36/273 (13%)
Query: 49 LLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-------GW 97
L+ H+ H L+ WAG+M L+E+A F P PM+ QG+ +LP + L GW
Sbjct: 1 LIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFILPFMTRLGIKESWGGW 60
Query: 98 GVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKDRN 155
+ G ++ + GV H++ S + I+H + + S P G K
Sbjct: 61 SI-TGESAVNPGLWSYEGVAGAHIVFSGLCFLSAIWHWVYWDLEI-FSDPRTG---KPSL 115
Query: 156 KMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSPSIIFGYL 213
+ I GIHL L G+ F F A + G+Y PG D +T S +G
Sbjct: 116 DLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPFGLTGRIQPVSPAWGAE 170
Query: 214 LKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-VWSGEAYL 272
PF G I H+ G + I+ G++H+ +P R L + + E L
Sbjct: 171 GFDPFVPGG----------IASHHIAAGLLGIIAGLFHLSVRPPQRLYRGLRMGNIETVL 220
Query: 273 SYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
S S+AA+ FI +W+ + P E +GPT
Sbjct: 221 SSSIAAVFFAAFIVAGTMWYGSATTPIELFGPT 253
Score = 41.4 bits (95), Expect = 0.025
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 401 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDI 460
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 461 FAGIDPELDAQVE 473
>emb|CAB75843.1| (AJ250263) photosystem II chlorophyll-binding protein CP-47
[Amphidinium operculatum]
Length = 506
Score = 80.4 bits (195), Expect = 5e-14
Identities = 84/291 (28%), Positives = 125/291 (42%), Gaps = 46/291 (15%)
Query: 35 WWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY----EQGLILLP 90
W+ + ++N G+L+ H+ H GLI WAG M L+E+ P P+Y Q ++P
Sbjct: 5 WFRVHIVVLNDPGRLISVHLMHTGLISGWAGLMALYELIVTDPSDPVYNPVWRQADYVIP 64
Query: 91 HLATL-------GWGV-GPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYH-ALLGPETLE 141
+A L GW + G + T V H++ S +L +H A E
Sbjct: 65 QMAKLGVVSSSYGWSLTGSSNPAVWTME--VVAATHILFSGLLILAAFWHWAYWDLELFI 122
Query: 142 ESFPFFGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIY--DTWAPG----GGD 195
+ G D NK I GIHL L + F F ++ GGI+ WA G
Sbjct: 123 NAST--GKRVLDLNK---IFGIHLFLASLTCF--GFGYAHLGGIFGPGMWASDETAVAGA 175
Query: 196 VRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTK 255
VR IT P+ + L SPF I+ H G I + GIWHI ++
Sbjct: 176 VRAIT-----PN--YSILALSPF----------SFGTIVAHHTVAGIIGVGVGIWHISSR 218
Query: 256 PFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
P A+ +A+ ++S E+ L+ S+ A+ I W+ + P E GPT
Sbjct: 219 PGAFIYQAVRMYSIESVLASSIIAVFFTALITSSASWYGSLTQPVELNGPT 269
Score = 42.6 bits (98), Expect = 0.011
Identities = 21/54 (38%), Positives = 25/54 (45%)
Query: 395 YMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA 448
Y + GS+ S + V S R W SH L F F+GHLWHA RA
Sbjct: 417 YARKSQFGSIFSFDRKTLRSDGVFRTSIRGWYTFSHVSLALFFFLGHLWHAARA 470
>gb|AAF72602.1| (AF222701) photosystem II apoprotein [Araucaria araucana]
Length = 462
Score = 79.6 bits (193), Expect = 8e-14
Identities = 76/280 (27%), Positives = 122/280 (43%), Gaps = 36/280 (12%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 3 VLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 62
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETLEESFPFFG 148
GW + G V + + GV H++ S + I+H + +
Sbjct: 63 KDSWGGWSI-TGETVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLDIFVD----E 117
Query: 149 YVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSP 206
K + I GIHL L G F F A + G+Y PG D +T + P
Sbjct: 118 RTGKPSLDLPKIFGIHLFLSGAACF--GFGAFHVTGLY---GPGIWVSDPYGLTG-KIQP 171
Query: 207 SIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-V 265
+ +G EG+ V I H+ G + IL G++H+ +P + L +
Sbjct: 172 -------VNPAWGAEGFDPFVPG--GIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRM 222
Query: 266 WSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ E LS S+AA+ FI +W+ + P E +GPT
Sbjct: 223 GNIETVLSSSIAAVFFAAFIVAGTMWYGSATTPIELFGPT 262
Score = 37.1 bits (84), Expect = 0.48
Identities = 15/51 (29%), Positives = 21/51 (40%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + + V SPR W H F GH+WH
Sbjct: 410 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHVTFALLFFFGHIWH 460
>gb|AAF72607.1| (AF222706) photosystem II apoprotein [Torreya californica]
Length = 462
Score = 78.0 bits (189), Expect = 2e-13
Identities = 75/279 (26%), Positives = 121/279 (42%), Gaps = 34/279 (12%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATLG- 96
++N G+L+ H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + LG
Sbjct: 3 VLNDPGRLIAVHIMHTALVAGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 62
Query: 97 ---W-GVGPGGEVIDT---FPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGY 149
W G GE + + Y H++ S + I+H + +
Sbjct: 63 KDSWGGWSITGETVSNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVY----WDLDVFCDDR 118
Query: 150 VWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSPS 207
K + I GIHL L G F F A + G+Y PG D +T + P
Sbjct: 119 TGKPSLDLPKIFGIHLFLSGAACF--GFGAFHVTGLY---GPGIWVSDPYGLTG-KIQP- 171
Query: 208 IIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL-VW 266
+ +G EG+ + I H+ G + IL G++H+ +P + L +
Sbjct: 172 ------VNPAWGAEGFDPFIPG--GIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMG 223
Query: 267 SGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ E LS S+AA+ FI +W+ + P E +GPT
Sbjct: 224 NIETVLSSSIAAVFFAAFIVAGTMWYGSATTPIELFGPT 262
Score = 36.7 bits (83), Expect = 0.63
Identities = 15/51 (29%), Positives = 21/51 (40%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + + V SPR W H F GH+WH
Sbjct: 410 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWH 460
>gb|AAF72598.1| (AF222697) photosystem II apoprotein [Cycas revoluta]
Length = 462
Score = 78.0 bits (189), Expect = 2e-13
Identities = 77/282 (27%), Positives = 124/282 (43%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ QG+ ++P + L
Sbjct: 3 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGI 62
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + G V + + GV H++ S + I+H + + +E
Sbjct: 63 NNSWGGWSI-TGETVTNPGLWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLDIFCDER--- 118
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F A + G+Y PG D +T +
Sbjct: 119 ---TGKPSLDLPKIFGIHLFLSGVACF--GSGAFHVTGLY---GPGIWVSDPYGLTG-KI 169
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
P + +G EG+ V I H+ G + IL G++H+ +P + L
Sbjct: 170 QP-------VNPAWGAEGFDPFVPG--GIASHHIAAGILGILAGLFHLSVRPPQRLYKGL 220
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ FI +W+ + P E +GPT
Sbjct: 221 RMGNIETVLSSSIAAVFFAAFIVAGTMWYGSATAPVELFGPT 262
Score = 36.7 bits (83), Expect = 0.63
Identities = 15/51 (29%), Positives = 21/51 (40%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + + V SPR W H F GH+WH
Sbjct: 410 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWH 460
>gb|AAG26281.1| (AF123851) photosystem II CP47 protein [Ginkgo biloba]
Length = 498
Score = 77.3 bits (187), Expect = 4e-13
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ Q + ++P + L
Sbjct: 2 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQSMFVIPFMTRLGI 61
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + G V + + GV H++ S + I+H + + +E
Sbjct: 62 KDSWGGWSI-TGETVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLDIFCDER--- 117
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T +
Sbjct: 118 ---TGKPSPDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTG-KI 168
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
P + +G EG+ V I H+ G + IL G +H+ +P + L
Sbjct: 169 QP-------VNPAWGAEGFDPFVPG--GIASHHIAAGILGILAGPFHLSVRPPQRLYKGL 219
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ FI +W+ + P E +GPT
Sbjct: 220 RMGNIETVLSSSIAAVFFAAFIVAGTMWYGSATTPVELFGPT 261
Score = 41.8 bits (96), Expect = 0.019
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 409 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFSGHIWHGARTLFRDV 468
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 469 FAGIDPDLDAQVE 481
>gb|AAF72606.1| (AF222705) photosystem II apoprotein [Ginkgo biloba]
Length = 462
Score = 77.3 bits (187), Expect = 4e-13
Identities = 77/282 (27%), Positives = 123/282 (43%), Gaps = 40/282 (14%)
Query: 42 LINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPE----KPMYEQGLILLPHLATL-- 95
++N G+LL H+ H L+ WAG+M L+E+A F P PM+ Q + ++P + L
Sbjct: 3 VLNDPGRLLSVHIMHTALVSGWAGSMALYELAVFDPSDPVLDPMWRQSMFVIPFMTRLGI 62
Query: 96 -----GWGVGPGGEVIDTFPYFVSGV--LHLISSAVLGFGGIYHALLGPETL--EESFPF 146
GW + G V + + GV H++ S + I+H + + +E
Sbjct: 63 KDSWGGWSI-TGETVTNPGIWSYEGVAGAHIVFSGLCFLAAIWHWVYWDLDIFCDER--- 118
Query: 147 FGYVWKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTL 204
K + I GIHL L G+ F F A + G+Y PG D +T +
Sbjct: 119 ---TGKPSPDLPKIFGIHLFLSGVACF--GFGAFHVTGLY---GPGIWVSDPYGLTG-KI 169
Query: 205 SPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRAL 264
P + +G EG+ V I H+ G + IL G +H+ +P + L
Sbjct: 170 QP-------VNPAWGAEGFDPFVPG--GIASHHIAAGILGILAGPFHLSVRPPQRLYKGL 220
Query: 265 -VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
+ + E LS S+AA+ FI +W+ + P E +GPT
Sbjct: 221 RMGNIETVLSSSIAAVFFAAFIVAGTMWYGSATTPVELFGPT 262
Score = 36.4 bits (82), Expect = 0.82
Identities = 15/51 (29%), Positives = 21/51 (40%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWH 444
+Y A LG + + + + V SPR W H F GH+WH
Sbjct: 410 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFSGHIWH 460
>gb|AAD44701.1| (AF130034) PSII CP47 apoprotein [Heterocapsa triquetra]
Length = 505
Score = 68.7 bits (165), Expect = 2e-10
Identities = 70/293 (23%), Positives = 121/293 (40%), Gaps = 49/293 (16%)
Query: 35 WWAGNARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMY----EQGLILLP 90
W+ + ++N G+L+ H+ H L+ WA M L+E+ P P+Y QG ++P
Sbjct: 5 WFRVHIVILNDPGRLISVHIMHTALVAGWAAVMTLYELIILDPTDPVYNPIWRQGAYVMP 64
Query: 91 HLATLG-------WGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEES 143
++ LG W +G EV + PY+ + + H LL ++ +
Sbjct: 65 FISRLGVVRSLYDWSLGI--EVTNN-PYWTYETV-----------AVSHILLSGFSILAA 110
Query: 144 FPFFGYVWKDRNKMTT----------ILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGG 193
F + Y + D +T I GIHL L + F F ++ G GG
Sbjct: 111 FWHWAYCYLDLFVSSTTGKLVLDLNRIFGIHLCLAALLCF--GFGLAHLTGF------GG 162
Query: 194 GDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHIL 253
+ + + S+ F + S G + V I H+ G I G+WH+
Sbjct: 163 PGMWTSDSFGIVGSVRFVKPVYSVIGLTPFCYGV-----ISSNHIVAGFFGIAVGLWHVS 217
Query: 254 TKPFAWARRAL-VWSGEAYLSYSLAALSVFGFIACCFVWFNNTAYPSEFYGPT 305
++P + L + + E LS S+AA+ FI +W+ + + E +GP+
Sbjct: 218 SRPGPTLYKLLGMGNIEGALSSSIAAVFFTAFITSATMWYGSLSTALELFGPS 270
Score = 41.8 bits (96), Expect = 0.019
Identities = 19/54 (35%), Positives = 23/54 (42%)
Query: 395 YMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA 448
Y A G + + + V SPR W + H F F GHLWH GRA
Sbjct: 416 YARKAQFGEIFTFDKKTGGADGVFRTSPRGWYSFGHVCFSFLFFFGHLWHGGRA 469
>gb|AAF73295.1| (AF188846) photosystem II CP47 protein [Zamia furfuracea]
Length = 475
Score = 62.1 bits (148), Expect = 2e-08
Identities = 70/260 (26%), Positives = 111/260 (41%), Gaps = 40/260 (15%)
Query: 64 AGAMNLFEVAHFVPEKP----MYEQGLILLPHLATLG-------WGVGPGGEVIDTFPYF 112
AG+M L+E+A F P P M+ QG+ ++P + LG W + G V + +
Sbjct: 1 AGSMALYELAVFDPSDPVLDPMWRQGMFVIPFMTRLGIKDSWGGWSI-TGETVTNPGLWS 59
Query: 113 VSGVL--HLISSAVLGFGGIYHALLGPETL--EESFPFFGYVWKDRNKMTTILGIHLILL 168
GV H++ S + I+H + + +E K + I GIHL L
Sbjct: 60 YEGVAGAHIVFSGLCFLAAIWHWVYWDLDIFCDER------TGKPSLDLPKIFGIHLFLS 113
Query: 169 GIGAFLLVFKASYFGGIYDTWAPG--GGDVRKITNLTLSPSIIFGYLLKSPFGGEGWIVS 226
G+ F F A + G+Y PG D +T + P + + +G EG+
Sbjct: 114 GVACF--GFGAFHVTGLY---GPGIWVSDPYGLTG-RIQP-------VNTAWGAEGFDPF 160
Query: 227 VDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSG-EAYLSYSLAALSVFGFI 285
V I H+ G + IL G++H+ +P + L E LS S+AA+ FI
Sbjct: 161 VPG--GIASHHIAAGILGILAGLFHLSVRPPQRLYKGLRMGNIETVLSSSIAAVFFAAFI 218
Query: 286 ACCFVWFNNTAYPSEFYGPT 305
+W+ + P E +GPT
Sbjct: 219 VAGTMWYGSATAPVELFGPT 238
Score = 42.2 bits (97), Expect = 0.014
Identities = 21/73 (28%), Positives = 29/73 (38%), Gaps = 2/73 (2%)
Query: 394 EYMTHAPLGSLNSVGGVATEINAVNYVSPRSWLATSHFVLGFFLFVGHLWHAGRA--RAA 451
+Y A LG + + + + V SPR W H F GH+WH R R
Sbjct: 386 KYARRAQLGEIFELDRATLKSDGVFRSSPRGWFTFGHATFALLFFFGHIWHGARTLFRDV 445
Query: 452 AAGFEKGIDRDFE 464
AG + +D E
Sbjct: 446 FAGIDPDLDAQVE 458
>emb|CAB16960.1| (Z99835) PsbC [Euglena myxocylindracea]
emb|CAB16961.1| (Z99836) PsbC [Euglena viridis]
Length = 23
Score = 51.5 bits (121), Expect = 2e-05
Identities = 23/23 (100%), Positives = 23/23 (100%)
Query: 48 KLLGAHVAHAGLIVFWAGAMNLF 70
KLLGAHVAHAGLIVFWAGAMNLF
Sbjct: 1 KLLGAHVAHAGLIVFWAGAMNLF 23
>emb|CAB16958.1| (Z99834) PsbC [Lepocinclis buetschlii]
Length = 23
Score = 49.2 bits (115), Expect = 1e-04
Identities = 22/23 (95%), Positives = 22/23 (95%)
Query: 48 KLLGAHVAHAGLIVFWAGAMNLF 70
KLLGAHVAHAGLIVFWAGAM LF
Sbjct: 1 KLLGAHVAHAGLIVFWAGAMTLF 23
>emb|CAB16956.1| (Z99832) PsbC [Cryptoglena pigra]
Length = 18
Score = 42.6 bits (98), Expect = 0.011
Identities = 18/18 (100%), Positives = 18/18 (100%)
Query: 53 HVAHAGLIVFWAGAMNLF 70
HVAHAGLIVFWAGAMNLF
Sbjct: 1 HVAHAGLIVFWAGAMNLF 18
>dbj|BAA78035.1| (AB027572) PSII 43kDa protein [Triticum aestivum]
Length = 22
Score = 42.2 bits (97), Expect = 0.014
Identities = 19/22 (86%), Positives = 19/22 (86%)
Query: 452 AAGFEKGIDRDFEPVLSMTPLN 473
AAGFEKGIDRD EPVL M PLN
Sbjct: 1 AAGFEKGIDRDLEPVLYMNPLN 22
>emb|CAA10849.1| (AJ222581) PsbC protein [Euglena anabaena]
Length = 30
Score = 39.5 bits (90), Expect = 0.095
Identities = 16/22 (72%), Positives = 19/22 (85%)
Query: 10 FYHVETLFNGTLALTGRDQETT 31
FYHVETL+NG L + GRDQE+T
Sbjct: 1 FYHVETLYNGKLTIGGRDQEST 22
>dbj|BAB24660.1| (AK006582) putative [Mus musculus]
Length = 380
Score = 35.6 bits (80), Expect = 1.4
Identities = 24/107 (22%), Positives = 43/107 (39%), Gaps = 10/107 (9%)
Query: 360 DLRAPWLEPLRGPNGLDLSRLKKDIQPWQERRSAEYMTHAPLGSLNSVGGVATEINAVNY 419
+L WL+ +GL + KD+ Q+ R A Y+T L ++G + E+
Sbjct: 247 ELDGDWLQKPPYEDGLKAEGIDKDVWLHQKMRPAGYLTQYDLSEFENIGAIGLEL----- 301
Query: 420 VSPRSWLATSHFVLGFFLFVGHLWHAGRARAAAAGFEKGIDRDFEPV 466
W S + FL +A + A G KG +++ + +
Sbjct: 302 -----WQVRSGTIFDNFLITDDEEYAEKFGKATWGETKGPEKEMDAI 343
>dbj|BAB05176.1| (AP001512) glycine betaine transporter [Bacillus halodurans]
Length = 566
Score = 35.6 bits (80), Expect = 1.4
Identities = 23/69 (33%), Positives = 27/69 (38%), Gaps = 1/69 (1%)
Query: 239 WLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLAALSVFGFIACC-FVWFNNTAY 297
WLG+ I WHI PF A + G + L V +A F F TA
Sbjct: 314 WLGTNTIFFWAWHIAWAPFMGLFIARISRGRTIREFMAGVLIVPSLLALIWFTTFGGTAL 373
Query: 298 PSEFYGPTG 306
E YGP G
Sbjct: 374 NLEMYGPGG 382
>sp|P96169|SGLT_VIBPA SODIUM/GLUCOSE COTRANSPORTER (NA(+)/GLUCOSE SYMPORTER)
gb|AAF80602.1|AF255301_1 (AF255301) Na+/galactose cotransporter SGLT [Vibrio
parahaemolyticus]
Length = 543
Score = 34.8 bits (78), Expect = 2.4
Identities = 33/111 (29%), Positives = 50/111 (44%), Gaps = 24/111 (21%)
Query: 157 MTTILGIHLI--LLGIGAFLLVFKASYFGGIYD-TWAPGGGDVRKITNLTLSPSIIFGYL 213
+ TILGI L+ +LG+ F LV+ S +GG+ W DV ++ L L + Y+
Sbjct: 154 LETILGIPLMYSILGLALFALVY--SIYGGLSAVVWT----DVIQVFFLVLG-GFMTTYM 206
Query: 214 LKSPFGG-EGWIVSVDDLEDIIGGHVWL-------------GSICILGGIW 250
S GG +GW V + D GH + G ++GG+W
Sbjct: 207 AVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLW 257
>dbj|BAA11215.1| (D78137) Na+/glucose symporter [Vibrio parahaemolyticus]
Length = 530
Score = 34.8 bits (78), Expect = 2.4
Identities = 33/111 (29%), Positives = 50/111 (44%), Gaps = 24/111 (21%)
Query: 157 MTTILGIHLI--LLGIGAFLLVFKASYFGGIYD-TWAPGGGDVRKITNLTLSPSIIFGYL 213
+ TILGI L+ +LG+ F LV+ S +GG+ W DV ++ L L + Y+
Sbjct: 141 LETILGIPLMYSILGLALFALVY--SIYGGLSAVVWT----DVIQVFFLVLG-GFMTTYM 193
Query: 214 LKSPFGG-EGWIVSVDDLEDIIGGHVWL-------------GSICILGGIW 250
S GG +GW V + D GH + G ++GG+W
Sbjct: 194 AVSFIGGTDGWFAGVSKMVDAAPGHFEMILDQSNPQYMNLPGIAVLIGGLW 244
>gb|AAC90628.1| (U48232) chlorophyll a-binding protein [Oenothera elata subsp.
hookeri]
Length = 65
Score = 34.8 bits (78), Expect = 2.4
Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 5/48 (10%)
Query: 421 SPRSWLATSH--FVLGFFLFVGHLWHAGRA--RAAAAGFEKGIDRDFE 464
+PR W H F L FF F GH+WH R R AG + +D E
Sbjct: 10 NPRGWFTFGHASFALLFFFF-GHIWHGARTLFRDVFAGIDPDLDTQVE 56
>emb|CAA10853.1| (AJ222583) PsbC protein [Euglena spirogyra]
Length = 20
Score = 34.4 bits (77), Expect = 3.2
Identities = 15/19 (78%), Positives = 17/19 (88%)
Query: 14 ETLFNGTLALTGRDQETTG 32
ETLFNG LA+ GRDQE+TG
Sbjct: 1 ETLFNGKLAVGGRDQESTG 19
>pir||D71112 hypothetical protein PH0667 - Pyrococcus horikoshii
dbj|BAA29758.1| (AP000003) 413aa long hypothetical protein [Pyrococcus horikoshii]
Length = 413
Score = 34.4 bits (77), Expect = 3.2
Identities = 26/61 (42%), Positives = 33/61 (53%), Gaps = 6/61 (9%)
Query: 72 VAHFVPEKPMYEQGLILLPHLATLGWGVGP--GGEVIDTFPYFV---SGVLHLISSAVLG 126
VA VP + QG+ LL + TLGW +GP GG + D F + V S L LI S +L
Sbjct: 352 VARRVPHRER-GQGMGLLNTMMTLGWVIGPLIGGLIADNFGFSVMLYSTTLPLIVSFLLA 410
Query: 127 F 127
F
Sbjct: 411 F 411
>pir||S60182 ATP-binding transport protein exsA - Rhizobium meliloti
emb|CAA90568.1| (Z50189) ExsA [Sinorhizobium meliloti]
emb|CAA12529.1| (AJ225561) ExsA protein [Sinorhizobium meliloti]
Length = 604
Score = 34.4 bits (77), Expect = 3.2
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Query: 151 WKDRNKMTTILGIHLILLGIGAFLLVFKASYFGGIYDTWAPGGGDVRKITNLTLSPSIIF 210
W++R + T G L GA LLV +A+ G WA G IT + S I+
Sbjct: 247 WENRTRRTWSRGT-LNGTAQGAMLLVLRAAVIGFALLLWARGQATAGDITFVLTSFFILQ 305
Query: 211 GYLLKSPFGGEGWIVSVDDLEDIIGGH 237
GYL + S++D+E+++ H
Sbjct: 306 GYLREVGMHIRNLQRSINDMEELVAIH 332
>pir||JT0672 apolipoprotein A-I - pig
Length = 265
Score = 34.4 bits (77), Expect = 3.2
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 352 GGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQP--------WQERRSAEYMTHAPLGS 403
G T FWD E LR DL +KK +QP WQE APLG+
Sbjct: 88 GPVTQEFWDNLXKETEALRQEMSKDLEEVKKKVQPYLDDFQNKWQEEMETYRQKMAPLGA 147
>emb|CAA10855.1| (AJ222584) PsbC protein [Euglena viridis]
Length = 21
Score = 34.0 bits (76), Expect = 4.2
Identities = 15/21 (71%), Positives = 17/21 (80%)
Query: 13 VETLFNGTLALTGRDQETTGF 33
VETLFN L + GRDQE+TGF
Sbjct: 1 VETLFNKKLTIGGRDQESTGF 21
>pir||T15310 hypothetical protein B0286.4 - Caenorhabditis elegans
gb|AAA80691.1| (U39848) similar to S. cerevisiae general negative regulator of
transcription subunit 2 (SP:P06100) [Caenorhabditis
elegans]
Length = 444
Score = 34.0 bits (76), Expect = 4.2
Identities = 19/48 (39%), Positives = 25/48 (51%)
Query: 83 EQGLILLPHLATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGI 130
E GL+L H TLG G G GG++ P ++GV+ G GGI
Sbjct: 381 ETGLMLQMHNLTLGTGGGGGGQITPPAPAGLNGVMGGGGVGAAGIGGI 428
>sp|P18648|APA1_PIG APOLIPOPROTEIN A-I PRECURSOR (APO-AI)
Length = 265
Score = 34.0 bits (76), Expect = 4.2
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 352 GGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQP--------WQERRSAEYMTHAPLGS 403
G T FWD E LR DL +KK +QP WQE APLG+
Sbjct: 88 GPVTQEFWDNLEKETEALRQEMSKDLEEVKKKVQPYLDDFQNKWQEEMETYRQKMAPLGA 147
>pir||A46018 apolipoprotein AI - pig
gb|AAA30992.1| (L00626) apolipoprotein A-I [Sus scrofa]
Length = 265
Score = 34.0 bits (76), Expect = 4.2
Identities = 21/60 (35%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 352 GGETMRFWDLRAPWLEPLRGPNGLDLSRLKKDIQP--------WQERRSAEYMTHAPLGS 403
G T FWD E LR DL +KK +QP WQE APLG+
Sbjct: 88 GPVTQEFWDNLEKETEALRQEMSKDLEEVKKKVQPYLDDFQNKWQEEMETYRQKMAPLGA 147
>emb|CAC28848.1| (AL513467) related to CAX4 protein [Neurospora crassa]
Length = 282
Score = 33.6 bits (75), Expect = 5.5
Identities = 16/45 (35%), Positives = 24/45 (52%)
Query: 40 ARLINLSGKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQ 84
AR+ + GK G +HA + FWA A+ LF +A P + +Q
Sbjct: 81 ARIHSTGGKGYGMPSSHAQFVSFWAVALGLFLLARHTPREQQQQQ 125
>pir||A56704 regulatory protein Myef-2 - mouse (fragment)
Length = 435
Score = 33.6 bits (75), Expect = 5.5
Identities = 14/39 (35%), Positives = 24/39 (60%)
Query: 92 LATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGI 130
L +G G+GPGG+ I ++GV+ + + +GFGG+
Sbjct: 183 LGGIGMGLGPGGQPISASQLNITGVMGNLGPSGVGFGGL 221
>pir||E82714 preprotein translocase SecY subunit XF1172 [imported] - Xylella
fastidiosa (strain 9a5c)
gb|AAF83982.1|AE003951_7 (AE003951) preprotein translocase SecY subunit [Xylella fastidiosa]
Length = 457
Score = 33.2 bits (74), Expect = 7.1
Identities = 36/158 (22%), Positives = 61/158 (37%), Gaps = 16/158 (10%)
Query: 47 GKLLGAHVAHAGLIVFWAGAMNLFEVAHFVPEKPMYEQGLILLPHLATLGWGVGPGGEVI 106
G G + ++F GA+ ++ V +VP + + ++ L GG ++
Sbjct: 10 GNRFGKSIELRHRLLFLFGALIVYRVGCYVPVPGVNPEAMLALMQKQ--------GGGIV 61
Query: 107 DTFPYFVSGVLHLISSAVLGFGGIYHALLGPETLEESFPFFGYVWKD----RNKMTTILG 162
D F F G LH S L A + + FP + K+ R K+T
Sbjct: 62 DMFNMFSGGALHRFSIFALNVMPYISASIVVQLATHIFPSLKAMQKEGESGRRKITQYSR 121
Query: 163 IHLILLGI---GAFLLVFK-ASYFGGIYDTWAPGGGDV 196
I ++L + G+ L + + GG +APG V
Sbjct: 122 IGAVILAVIQGGSIALALQNQTAPGGAAVVYAPGAAFV 159
>emb|CAA10851.1| (AJ222582) PsbC protein [Euglena granulata]
Length = 20
Score = 33.2 bits (74), Expect = 7.1
Identities = 14/19 (73%), Positives = 16/19 (83%)
Query: 14 ETLFNGTLALTGRDQETTG 32
ETLFNG L + GRDQE+TG
Sbjct: 1 ETLFNGKLTIGGRDQESTG 19
>gb|AAA78270.1| (U13262) myelin gene expression factor [Mus musculus]
Length = 435
Score = 33.2 bits (74), Expect = 7.1
Identities = 14/39 (35%), Positives = 24/39 (60%)
Query: 92 LATLGWGVGPGGEVIDTFPYFVSGVLHLISSAVLGFGGI 130
L +G G+GPGG+ I ++GV+ + + +GFGG+
Sbjct: 183 LGGIGMGLGPGGQPISASQRNITGVMGNLGPSGVGFGGL 221
Database: nr
Posted date: Mar 14, 2001 1:25 PM
Number of letters in database: 201,912,487
Number of sequences in database: 640,428
Lambda K H
0.324 0.143 0.465
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 214440379
Number of Sequences: 640428
Number of extensions: 10130423
Number of successful extensions: 18876
Number of sequences better than 10.0: 224
Number of HSP's better than 10.0 without gapping: 213
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 18207
Number of HSP's gapped (non-prelim): 358
length of query: 473
length of database: 201,912,487
effective HSP length: 49
effective length of query: 424
effective length of database: 170,531,515
effective search space: 72305362360
effective search space used: 72305362360
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (22.0 bits)
S2: 73 (32.8 bits)
Lotus japonicus(Cp)