BLAST2 result
BLASTP 2.1.2 [Oct-19-2000]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33185.1 126 aa
(126 letters)
Database: nr
640,428 sequences; 201,912,487 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAB67135.1| (AJ271079) Ycf3 protein [Oenothera elata subsp. ... 265 2e-70
gi|11465956 Ycf3 protein [Nicotiana tabacum] >gi|140285|sp|P1220... 261 2e-69
pir||S60189 hypothetical protein 170 - maize >gi|949982|emb|CAA4... 259 1e-68
gb|AAB30283.1| (S69196) IRF170=rps operon [corn, seedlings, Pept... 259 1e-68
gi|11497526 ycf3 protein [Spinacia oleracea] >gi|7636107|emb|CAB... 258 2e-68
gi|11467193 hypothetical protein [Zea mays] >gi|140282|sp|P27324... 256 6e-68
gi|7525034 ycf3 [Arabidopsis thaliana] >gi|6686166|sp|P56787|YCF... 255 1e-67
emb|CAB44315.1| (AJ242660) YCF3 protein [Sinapis alba] 255 1e-67
sp|P12203|YCF3_ORYSA HYPOTHETICAL 19 KD PROTEIN (ORF 170) >gi|82... 253 7e-67
gi|11466788 ORF170 [Oryza sativa] >gi|669081|emb|CAA33997.1| (X1... 246 7e-65
gi|7524706 ORF169 [Pinus thunbergii] >gi|1723360|sp|P52806|YCF3_... 238 2e-62
pir||S01603 hypothetical protein 167 - liverwort (Marchantia pol... 235 1e-61
sp|P12202|YCF3_MARPO HYPOTHETICAL 19 KD PROTEIN (ORF 167) >gi|81... 235 1e-61
gi|11467792 hypothetical chloroplast RF3 [Nephroselmis olivacea]... 212 1e-54
gi|11466370 hypothetical chloroplast RF3 [Mesostigma viride] >gi... 208 3e-53
emb|CAA09250.1| (AJ010570) YCF3 protein [Hordeum vulgare] >gi|34... 204 3e-52
gi|7524787 ycf3 [Chlorella vulgaris] >gi|3025039|sp|P56311|YCF3_... 200 5e-51
pir||T07996 ycf3 protein - Chlamydomonas reinhardtii chloroplast... 198 3e-50
gi|11467297 ycf3 [Cyanophora paradoxa] >gi|1351776|sp|P48191|YCF... 190 4e-48
gi|11467695 hypothetical chloroplast RF3 [Guillardia theta] >gi|... 180 5e-45
gi|11465724 hypothetical chloroplast ORF 3. [Porphyra purpurea] ... 180 8e-45
sp|Q08814|YCF3_CYACA HYPOTHETICAL 19.1 KD PROTEIN IN INFB-ATPB I... 172 2e-42
pir||S75578 hypothetical protein slr0823 - Synechocystis sp. (st... 170 7e-42
pir||A05191 hypothetical protein 82 - common tobacco chloroplast... 162 1e-39
gi|11467562 ORF179 [Odontella sinensis] >gi|1351777|sp|P49525|YC... 160 7e-39
gi|11465584 unknown [Cyanidium caldarium] >gi|6466440|gb|AAF1302... 156 8e-38
dbj|BAB12706.1| (AP002746) hypothetical protein [Oryza sativa] 155 2e-37
pir||G82208 GGDEF family protein VC1367 [imported] - Vibrio chol... 50 9e-06
gb|AAC49446.1| (U62135) SPINDLY [Arabidopsis thaliana] >gi|12322... 49 2e-05
emb|CAA76834.1| (Y17720) SPINDLY protein [Petunia x hybrida] 48 6e-05
gb|AAF55179.1| (AE003708) CG5038 gene product [Drosophila melano... 45 4e-04
gb|AAF26789.1|AC016829_13 (AC016829) putative O-linked GlcNAc tr... 45 5e-04
pir||E70463 conserved hypothetical protein aq_1896 - Aquifex aeo... 43 0.002
pir||S75991 hypothetical protein - Synechocystis sp. (strain PCC... 43 0.002
gb|AAC36055.1| (AF035820) gibberellin action negative regulator ... 42 0.003
pir||F69210 conserved hypothetical protein MTH83 - Methanobacter... 42 0.003
pir||E69190 conserved hypothetical protein MTH68 - Methanobacter... 41 0.004
sp|O67178|YA88_AQUAE HYPOTHETICAL PROTEIN AQ_1088 >gi|7459514|pi... 41 0.006
pir||B69196 conserved hypothetical protein MTH72 - Methanobacter... 41 0.007
gb|AAK01173.1|AF314195_1 (AF314195) OSM-5 [Caenorhabditis elegans] 40 0.013
gb|AAF60551.1| (AC006761) contains similarity to Pfam domain PF0... 40 0.013
sp|Q58741|YD45_METJA HYPOTHETICAL PROTEIN MJ1345 >gi|2128804|pir... 39 0.017
gb|AAF46676.1| (AE003453) CG4050 gene product [Drosophila melano... 39 0.022
gb|AAD55431.1|AF181645_1 (AF181645) BcDNA.GH12144 [Drosophila me... 39 0.022
pir||C70121 hypothetical protein BB0171 - Lyme disease spirochet... 39 0.029
pir||E69078 conserved hypothetical protein MTH1585 - Methanobact... 38 0.038
emb|CAB94590.1| (AL359214) hypothetical protein SC7E4.02 [Strept... 37 0.084
pir||E70317 hypothetical protein aq_183 - Aquifex aeolicus >gi|2... 37 0.084
gb|AAD30860.1|AF116251_3 (AF116251) BatC [Bacteroides fragilis] 37 0.11
emb|CAA06012.1| (AJ003222) hypothetical protein [Borrelia burgdo... 36 0.14
gb|AAB63465.1| (U77412) O-linked GlcNAc transferase [Caenorhabdi... 35 0.33
pir||A69689 response regulator aspartate phosphatase rapF - Baci... 35 0.33
gb|AAA62535.1| (U21320) contains TPR domain-like repeats [Caenor... 35 0.33
dbj|BAB30817.1| (AK017580) putative [Mus musculus] 35 0.43
gb|AAH02989.1|AAH02989 (BC002989) Unknown (protein for IMAGE:282... 34 0.56
gi|12741709 small glutamine-rich tetratricopeptide repeat (TPR)-... 34 0.56
dbj|BAB21885.1| (AB055261) hypothetical protein [Macaca fascicul... 34 0.56
gb|AAF67841.1|AF198051_1 (AF198051) peroxisomal targeting signal... 34 0.56
pir||T08782 hypothetical protein DKFZp586N1020.1 - human (fragment) 34 0.56
pir||B72338 galactosyltransferase-related protein - Thermotoga m... 34 0.56
pir||B70374 conserved hypothetical protein aq_854 - Aquifex aeol... 34 0.56
gi|4506921 small glutamine-rich tetratricopeptide repeat (TPR)-c... 34 0.56
sp|Q58823|YE28_METJA HYPOTHETICAL PROTEIN MJ1428 >gi|2128852|pir... 34 0.56
pir||T16298 hypothetical protein F38B6.6 - Caenorhabditis elegan... 34 0.56
pir||E69688 response regulator aspartate phosphatase rapB - Baci... 34 0.73
gi|12083667 small glutamine-rich tetratricopeptide repeat (TPR) ... 34 0.96
pir||B70402 hypothetical protein aq_1185 - Aquifex aeolicus >gi|... 34 0.96
gb|AAB87735.1| (U78597) kinesin light chain [Plectonema boryanum] 34 0.96
sp|P17885|BIMA_EMENI BIMA PROTEIN >gi|539385|pir||A53256 nuclear... 34 0.96
dbj|BAB22218.1| (AK002597) putative [Mus musculus] 33 1.3
pir||C83262 hypothetical protein PA3074 [imported] - Pseudomonas... 33 1.3
gi|4505499 O-linked GlcNAc transferase; O-GlcNAc transferase (ur... 33 1.3
sp|P56558|OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUC... 33 1.3
pir||S76685 hypothetical protein - Synechocystis sp. (strain PCC... 33 1.3
dbj|BAB29319.1| (AK014393) putative [Mus musculus] 33 1.6
gb|AAH01978.1|AAH01978 (BC001978) Unknown (protein for IMAGE:346... 33 1.6
dbj|BAB11256.1| (AB009049) peroxisomal targeting signal type 1 r... 33 1.6
dbj|BAA86454.1| (AB032966) KIAA1140 protein [Homo sapiens] 33 1.6
pir||T51817 peroxisomal targeting signal type 1 receptor [import... 33 1.6
gb|AAB93327.1| (U88165) F54C1.5 gene product [Caenorhabditis ele... 33 1.6
sp|Q57992|Y572_METJA HYPOTHETICAL PROTEIN MJ0572 >gi|2128384|pir... 33 1.6
pir||B36972 aad 5'-region hypothetical protein - Clostridium ace... 33 1.6
dbj|BAA06145.1| (D29674) DNA-binding protein [Lactobacillus sp.]... 33 1.6
sp|P33746|SOLR_CLOAB SOL LOCUS TRANSCRIPTIONAL REPRESSOR >gi|421... 33 1.6
pir||H83171 type 4 fimbrial biogenesis protein PilF PA3805 [impo... 32 2.2
pir||T48150 stress-induced protein sti1-like protein - Arabidops... 32 2.2
gb|AAC69177.1| (AF053104) peroxisomal targeting signal 1 recepto... 32 2.2
gb|AAC69181.1| (AF056283) peroxisomal targeting sequence 1 recep... 32 2.2
gb|AAC69180.1| (AF056282) peroxisomal targeting sequence 1 recep... 32 2.2
gb|AAC97489.1| (AF068690) peroxisomal targeting signal-1 recepto... 32 2.2
gi|12736135 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organiz... 32 2.8
gb|AAK00601.1|AF220563_1 (AF220563) transcriptional activator Np... 32 2.8
pdb|1ELW|A Chain A, Crystal Structure Of The Tpr1-Domain Of Hop ... 32 2.8
gb|AAB94760.1| (AF039202) Hsp70/Hsp90 organizing protein; hop [C... 32 2.8
emb|CAA75351.1| (Y15068) p60 protein [Rattus norvegicus] 32 2.8
gb|AAC53267.1| (U27830) extendin [Mus musculus] 32 2.8
gi|5729800 Tg737 protein; Probe hTg737 (polycystic kidney diseas... 32 2.8
gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... 32 2.8
emb|CAC22693.1| (AL389894) hypothetical protein L779.03 [Leishma... 32 3.7
gb|AAF73524.1| (AE002273) type III secretion chaperone, putative... 32 3.7
gb|AAF50412.1| (AE003555) CG6915 gene product [Drosophila melano... 32 3.7
pir||T36877 probable regulatory protein - Streptomyces coelicolo... 32 3.7
pir||B70157 hypothetical protein BB0459 - Lyme disease spirochet... 32 3.7
sp|P14922|SSN6_YEAST GLUCOSE REPRESSION MEDIATOR PROTEIN >gi|171... 32 3.7
gi|6319589 Transcription regulatory protein; Cyc8p [Saccharomyce... 32 3.7
pir||C82296 conserved hypothetical protein VC0648 [imported] - V... 31 4.8
gb|AAF58990.1| (AE003834) CG8777 gene product [Drosophila melano... 31 4.8
gb|AAC12945.1| (AF056198) Hsp70/Hsp90 organizing protein homolog... 31 4.8
pir||S74665 outer membrane protein mom72, 72K - Synechocystis sp... 31 4.8
pir||JC5302 PilF protein - Pseudomonas aeruginosa >gi|1162960|gb... 31 4.8
pir||S75709 hypothetical protein sll0886 - Synechocystis sp. (st... 31 4.8
sp|P39833|NLPI_ECOLI LIPOPROTEIN NLPI PRECURSOR >gi|7429261|pir|... 31 4.8
dbj|BAB30914.1| (AK017763) putative [Mus musculus] 31 6.3
dbj|BAB28115.1| (AK012246) putative [Mus musculus] 31 6.3
dbj|BAB15537.1| (AK026724) unnamed protein product [Homo sapiens] 31 6.3
dbj|BAB10563.1| (AB008265) gene_id:MDC12.18~pir||F69210~similar ... 31 6.3
gb|AAF47564.1| (AE003472) Dhc62B gene product [Drosophila melano... 31 6.3
gb|AAF32311.1|AF217788_1 (AF217788) O-glycosyltransferase [Droso... 31 6.3
gb|AAD38597.1|AF145622_1 (AF145622) BcDNA.GH04245 [Drosophila me... 31 6.3
pir||T04740 hypothetical protein F6G17.110 - Arabidopsis thalian... 31 6.3
pir||T27773 hypothetical protein ZK20.4 - Caenorhabditis elegans... 31 6.3
pir||B71485 probable tpr repeats (o-linked glcnac transferase ho... 31 6.3
sp|P19737|YREC_SYNP2 HYPOTHETICAL 28.7 KD PROTEIN IN RECA 3'REGI... 31 6.3
dbj|BAB29698.1| (AK015064) putative [Mus musculus] 31 8.3
dbj|BAB08428.1| (AB017067) gb|AAF32311.1~gene_id:MJC20.5~similar... 31 8.3
pir||D82289 polyphosphate kinase VC0723 [imported] - Vibrio chol... 31 8.3
gi|11465458 unknown [Cyanidium caldarium] >gi|6466361|gb|AAF1294... 31 8.3
gb|AAC67538.1| (AF081799) developmental protein DG1071 [Dictyost... 31 8.3
pir||T31314 hypothetical protein 2 - Cenarchaeum symbiosum >gi|3... 31 8.3
gb|AAC32883.1| (AF083928) polyphosphate kinase [Vibrio cholerae] 31 8.3
pir||A70189 hypothetical protein BB0714 - Lyme disease spirochet... 31 8.3
sp|P42460|YCOA_SYNP7 HYPOTHETICAL 45.0 KD PROTEIN IN COBA 5'REGI... 31 8.3
>emb|CAB67135.1| (AJ271079) Ycf3 protein [Oenothera elata subsp. hookeri]
Length = 158
Score = 265 bits (669), Expect = 2e-70
Identities = 123/126 (97%), Positives = 126/126 (99%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSY+LYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 33 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYVLYNIGLIHTSNGEHTKALEYYFRALERN 92
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 93 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 152
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 153 ITRRFE 158
>gi|11465956 Ycf3 protein [Nicotiana tabacum]
sp|P12204|YCF3_TOBAC HYPOTHETICAL 19 KD PROTEIN (ORF 168)
emb|CAA77415.1| (Z00044) Ycf3 protein [Nicotiana tabacum]
Length = 168
Score = 261 bits (661), Expect = 2e-69
Identities = 122/126 (96%), Positives = 125/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI+QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEA NWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIQQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAHNWLK 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>pir||S60189 hypothetical protein 170 - maize
emb|CAA44290.1| (X62424) ORF170 [Zea mays]
Length = 170
Score = 259 bits (654), Expect = 1e-68
Identities = 121/126 (96%), Positives = 124/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>gb|AAB30283.1| (S69196) IRF170=rps operon [corn, seedlings, Peptide, 170 aa] [Zea
mays]
Length = 170
Score = 259 bits (654), Expect = 1e-68
Identities = 121/126 (96%), Positives = 124/126 (98%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>gi|11497526 ycf3 protein [Spinacia oleracea]
emb|CAB88727.1| (AJ400848) ycf3 protein [Spinacia oleracea]
Length = 165
Score = 258 bits (652), Expect = 2e-68
Identities = 120/126 (95%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 40 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 99
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAIRQGDSEIAE+WFDQAAEYWKQA+ LTPGNYIEA NWLK
Sbjct: 100 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAEAWFDQAAEYWKQALTLTPGNYIEAHNWLK 159
Query: 121 ITRRFE 126
IT RFE
Sbjct: 160 ITGRFE 165
>gi|11467193 hypothetical protein [Zea mays]
sp|P27324|YCF3_MAIZE HYPOTHETICAL 19 KD PROTEIN (ORF 170)
pir||S58553 hypothetical protein 170 - maize chloroplast
emb|CAA41108.1| (X58080) ORF170 [Zea mays]
emb|CAA60287.1| (X86563) hypothetical protein [Zea mays]
Length = 170
Score = 256 bits (648), Expect = 6e-68
Identities = 120/126 (95%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEA RLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>gi|7525034 ycf3 [Arabidopsis thaliana]
sp|P56787|YCF3_ARATH HYPOTHETICAL 14.7 KDA PROTEIN YCF3
dbj|BAA84386.1| (AP000423) ycf3 [Arabidopsis thaliana]
Length = 126
Score = 255 bits (645), Expect = 1e-67
Identities = 119/126 (94%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI+QGDSE+AE+WF QAAEYWKQAI LTPGNYIEAQNWL
Sbjct: 61 PFLPQAFNNMAVICHYRGEQAIQQGDSEMAEAWFAQAAEYWKQAITLTPGNYIEAQNWLT 120
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 121 ITRRFE 126
>emb|CAB44315.1| (AJ242660) YCF3 protein [Sinapis alba]
Length = 168
Score = 255 bits (645), Expect = 1e-67
Identities = 119/126 (94%), Positives = 123/126 (97%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI+QGDSE+AE+WF QAAEYWKQAI LTPGNYIEAQNWL
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAIQQGDSEMAEAWFAQAAEYWKQAITLTPGNYIEAQNWLT 162
Query: 121 ITRRFE 126
ITRRFE
Sbjct: 163 ITRRFE 168
>sp|P12203|YCF3_ORYSA HYPOTHETICAL 19 KD PROTEIN (ORF 170)
pir||S05104 hypothetical protein 170 - rice chloroplast
prf||1603356AC intron-containing ORF 170 [Oryza sativa]
Length = 170
Score = 253 bits (639), Expect = 7e-67
Identities = 119/126 (94%), Positives = 121/126 (95%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEA RLE DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEATRLESDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHYRGEQAI QGDSEIAE+WFDQAAEYWKQAI LTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHYRGEQAILQGDSEIAEAWFDQAAEYWKQAIGLTPGNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 163 ITKRFE 168
>gi|11466788 ORF170 [Oryza sativa]
emb|CAA33997.1| (X15901) ORF170 [Oryza sativa]
Length = 169
Score = 246 bits (622), Expect = 7e-65
Identities = 118/126 (93%), Positives = 120/126 (94%), Gaps = 1/126 (0%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M AQSEGNYAEALQNYYEA RLE DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 43 MLAQSEGNYAEALQNYYEATRLESDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
PFLPQAFNNMAVICHY GEQAI QGDSEIAE+WFDQAAEYWKQAI LTPGNYIEAQNWLK
Sbjct: 103 PFLPQAFNNMAVICHY-GEQAILQGDSEIAEAWFDQAAEYWKQAIGLTPGNYIEAQNWLK 161
Query: 121 ITRRFE 126
IT+RFE
Sbjct: 162 ITKRFE 167
>gi|7524706 ORF169 [Pinus thunbergii]
sp|P52806|YCF3_PINTH HYPOTHETICAL 19.5 KD PROTEIN YCF3 (ORF 169)
pir||T07539 hypothetical protein 169 - Japanese black pine chloroplast
dbj|BAA04415.1| (D17510) ORF169 [Pinus thunbergii]
Length = 169
Score = 238 bits (602), Expect = 2e-62
Identities = 111/125 (88%), Positives = 116/125 (92%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEALQNYYEAMRLE DPYDRSYILYNIGL+HTSNGEHTKALEYYF+ALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLETDPYDRSYILYNIGLVHTSNGEHTKALEYYFQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P LPQA NN A+ICHYRGEQAIRQGD E AE+WFDQAAEYW+QAIAL PGNYIEAQNWLK
Sbjct: 103 PSLPQALNNTALICHYRGEQAIRQGDPETAEAWFDQAAEYWEQAIALAPGNYIEAQNWLK 162
Query: 121 ITRRF 125
IT RF
Sbjct: 163 ITGRF 167
>pir||S01603 hypothetical protein 167 - liverwort (Marchantia polymorpha)
chloroplast
Length = 167
Score = 235 bits (594), Expect = 1e-61
Identities = 109/125 (87%), Positives = 115/125 (91%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEH KALEYYF+ALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHAKALEYYFQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P LPQAFNNMAVICHYRGEQAI+QGD E +E+WFDQAAEYWKQAI L P NYIEA NWLK
Sbjct: 103 PSLPQAFNNMAVICHYRGEQAIQQGDPEASETWFDQAAEYWKQAILLAPSNYIEAHNWLK 162
Query: 121 ITRRF 125
+T RF
Sbjct: 163 MTGRF 167
>sp|P12202|YCF3_MARPO HYPOTHETICAL 19 KD PROTEIN (ORF 167)
pir||A05041 hypothetical protein 167 - liverwort (Marchantia polymorpha)
chloroplast
Length = 168
Score = 235 bits (594), Expect = 1e-61
Identities = 109/125 (87%), Positives = 115/125 (91%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEH KALEYYF+ALERN
Sbjct: 44 MSAQSEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHAKALEYYFQALERN 103
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P LPQAFNNMAVICHYRGEQAI+QGD E +E+WFDQAAEYWKQAI L P NYIEA NWLK
Sbjct: 104 PSLPQAFNNMAVICHYRGEQAIQQGDPEASETWFDQAAEYWKQAILLAPSNYIEAHNWLK 163
Query: 121 ITRRF 125
+T RF
Sbjct: 164 MTGRF 168
>gi|11467792 hypothetical chloroplast RF3 [Nephroselmis olivacea]
gb|AAD54814.1|AF137379_37 (AF137379) hypothetical chloroplast RF3 [Nephroselmis olivacea]
Length = 171
Score = 212 bits (535), Expect = 1e-54
Identities = 100/126 (79%), Positives = 110/126 (86%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQ+EG YAEALQNYYEAMRLEVD YDRSYILYNIGLIHTSNGEH KALEYY++ALERN
Sbjct: 43 MSAQAEGEYAEALQNYYEAMRLEVDAYDRSYILYNIGLIHTSNGEHAKALEYYYQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P+LPQA NN+AVI HYRGEQAI G+S I+ FD+AA+YWK+AI L P NYIEAQNWLK
Sbjct: 103 PYLPQALNNIAVIYHYRGEQAIESGNSRISNLLFDKAADYWKEAIRLAPTNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT R E
Sbjct: 163 ITNRLE 168
>gi|11466370 hypothetical chloroplast RF3 [Mesostigma viride]
sp|Q9MUT7|YCF3_MESVI HYPOTHETICAL 19.9 KDA PROTEIN YCF3 (RF3)
gb|AAF43814.1|AF166114_26 (AF166114) hypothetical chloroplast RF3 [Mesostigma viride]
Length = 173
Score = 208 bits (523), Expect = 3e-53
Identities = 98/126 (77%), Positives = 109/126 (85%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQ+EG YAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEH KALEYY++A+ERN
Sbjct: 43 MSAQAEGEYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHGKALEYYYQAIERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P LPQA NN+AVI HYRGEQAI +G+ +E F+QAA YWKQAI L P +YIEAQNWLK
Sbjct: 103 PSLPQALNNIAVIYHYRGEQAIEEGNIATSEILFNQAASYWKQAIRLAPNSYIEAQNWLK 162
Query: 121 ITRRFE 126
IT R E
Sbjct: 163 ITGRIE 168
>emb|CAA09250.1| (AJ010570) YCF3 protein [Hordeum vulgare]
emb|CAA09251.1| (AJ010571) putative YCF3 protein [Hordeum vulgare]
Length = 97
Score = 204 bits (514), Expect = 3e-52
Identities = 93/97 (95%), Positives = 96/97 (98%)
Query: 22 LEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQA 81
LE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQA
Sbjct: 1 LEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQA 60
Query: 82 IRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNW 118
I +GDSEIAE+WFDQAAEYWKQAIALTPGNYIEAQNW
Sbjct: 61 ILEGDSEIAEAWFDQAAEYWKQAIALTPGNYIEAQNW 97
>gi|7524787 ycf3 [Chlorella vulgaris]
sp|P56311|YCF3_CHLVU HYPOTHETICAL 19.5 KD PROTEIN YCF3
pir||T07217 hypothetical protein ycf3 - Chlorella vulgaris chloroplast
dbj|BAA57864.1| (AB001684) ycf3 [Chlorella vulgaris]
Length = 167
Score = 200 bits (504), Expect = 5e-51
Identities = 92/125 (73%), Positives = 108/125 (85%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEALQNYYEA+RLE D YDRSYILYNIGLIHTSNG+H +AL+YY++ALERN
Sbjct: 43 MSAQSEGEYAEALQNYYEALRLETDAYDRSYILYNIGLIHTSNGDHARALDYYYQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P LPQA NN+AVI HYRGEQA+ +EI++ FD+AA+YW++AI L P NYIEAQNWLK
Sbjct: 103 PSLPQALNNIAVIYHYRGEQALESSQTEISKLLFDKAADYWREAIRLAPTNYIEAQNWLK 162
Query: 121 ITRRF 125
+T RF
Sbjct: 163 MTGRF 167
>pir||T07996 ycf3 protein - Chlamydomonas reinhardtii chloroplast
emb|CAA74008.1| (Y13655) hypothetical 19 kD protein, Ycf3 [Chlamydomonas
reinhardtii]
Length = 172
Score = 198 bits (497), Expect = 3e-50
Identities = 94/124 (75%), Positives = 106/124 (84%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQ+EG YAEALQNYYEAMRLEVD YDRSYILYNIGLIHTSNGEH +ALEYY++ALERN
Sbjct: 43 MSAQAEGEYAEALQNYYEAMRLEVDAYDRSYILYNIGLIHTSNGEHGRALEYYYQALERN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P L A NN+AVI HYRGEQAI G SEI++ F++AA+YWK+AI L P NYIEA NWLK
Sbjct: 103 PSLSSALNNIAVIYHYRGEQAIENGQSEISQILFEKAADYWKEAIRLAPTNYIEALNWLK 162
Query: 121 ITRR 124
+T R
Sbjct: 163 MTGR 166
>gi|11467297 ycf3 [Cyanophora paradoxa]
sp|P48191|YCF3_CYAPA HYPOTHETICAL 19.9 KD PROTEIN YCF3
pir||T06842 ycf3 protein - Cyanophora paradoxa cyanelle
gb|AAA81185.1| (U30821) ycf3 gene product [Cyanophora paradoxa]
Length = 173
Score = 190 bits (479), Expect = 4e-48
Identities = 92/124 (74%), Positives = 102/124 (82%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEAL+NYYEA+RLE DPYD+SY YNI LIHTSNG+ TKALEYY +AL+ N
Sbjct: 43 MSAQSEGAYAEALENYYEALRLEEDPYDKSYTFYNIALIHTSNGDQTKALEYYRQALDLN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P +PQA NNMAVI H +GEQA QGD E+AE+ FDQAA YWKQAI L P NYIEAQNWLK
Sbjct: 103 PKMPQALNNMAVIYHAQGEQAAEQGDMEMAEALFDQAAFYWKQAIRLAPDNYIEAQNWLK 162
Query: 121 ITRR 124
T R
Sbjct: 163 TTGR 166
>gi|11467695 hypothetical chloroplast RF3 [Guillardia theta]
sp|O78490|YCF3_GUITH HYPOTHETICAL 19.9 KD PROTEIN YCF3
gb|AAC35681.1| (AF041468) hypothetical chloroplast RF3 [Guillardia theta]
Length = 172
Score = 180 bits (453), Expect = 5e-45
Identities = 86/124 (69%), Positives = 102/124 (81%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEAL+NYYEA+RLE DPYDRSYILYNIGLI+ SNGE+ KALEYY +AL+ N
Sbjct: 43 MSAQSEGEYAEALENYYEALRLEEDPYDRSYILYNIGLIYASNGEYVKALEYYHQALDLN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
LP A NN+AVI HY+G +A + + ++A + FD+AAEYWKQAI L+P NYIEAQNWLK
Sbjct: 103 SQLPAALNNIAVIYHYQGVKASEKKELDLARTLFDKAAEYWKQAIRLSPNNYIEAQNWLK 162
Query: 121 ITRR 124
T R
Sbjct: 163 TTGR 166
>gi|11465724 hypothetical chloroplast ORF 3. [Porphyra purpurea]
sp|P51258|YCF3_PORPU HYPOTHETICAL 20.2 KD PROTEIN YCF3 (ORF173)
pir||S73179 hypothetical protein 3 - red alga (Porphyra purpurea) chloroplast
gb|AAC08144.1| (U38804) hypothetical chloroplast ORF 3. [Porphyra purpurea]
Length = 173
Score = 180 bits (451), Expect = 8e-45
Identities = 85/126 (67%), Positives = 103/126 (81%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEAL+NYYEA++LE DPYDRSYILYNIGLI+ SNGE+ KALEYY + LE N
Sbjct: 43 MSAQSEGEYAEALENYYEALKLEEDPYDRSYILYNIGLIYASNGEYIKALEYYHQGLELN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
LPQA NN+AVI HY+G QA+ + + E+++ FD+AA+YW+QAI L P NYIEAQNWLK
Sbjct: 103 FKLPQALNNIAVIYHYQGVQAVEEKNIELSKLMFDKAAQYWQQAIKLAPDNYIEAQNWLK 162
Query: 121 ITRRFE 126
T R +
Sbjct: 163 TTGRMK 168
>sp|Q08814|YCF3_CYACA HYPOTHETICAL 19.1 KD PROTEIN IN INFB-ATPB INTERGENIC REGION
(ORF167)
pir||S36411 hypothetical protein 167 - red alga (Cyanidium caldarium)
pir||S70824 hypothetical protein 167 - red alga (Cyanidium caldarium)
chloroplast
emb|CAA47240.1| (X66698) orf 167 [Cyanidium caldarium]
Length = 167
Score = 172 bits (431), Expect = 2e-42
Identities = 83/124 (66%), Positives = 96/124 (76%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEAL NYYEA+ LE DPYD+S+ILYNIGLIH SNGE+ KAL+YY +ALE N
Sbjct: 43 MSAQSEGEYAEALANYYEALNLEEDPYDKSFILYNIGLIHASNGEYVKALDYYHKALEAN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
LPQA NN+AVI HY+ +A D E A++ F +AA+YWKQAI L P NYIEAQNWL
Sbjct: 103 NKLPQALNNIAVIYHYQAVKASEINDLETAQALFHEAAQYWKQAIKLAPSNYIEAQNWLL 162
Query: 121 ITRR 124
T R
Sbjct: 163 STGR 166
>pir||S75578 hypothetical protein slr0823 - Synechocystis sp. (strain PCC 6803)
dbj|BAA18139.1| (D90911) hypothetical protein [Synechocystis sp.]
Length = 173
Score = 170 bits (426), Expect = 7e-42
Identities = 82/126 (65%), Positives = 97/126 (76%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQ++G YAEAL NY EA+RLE +P DRSYILYN+ LIH SNG+H KAL Y A+E N
Sbjct: 43 MSAQADGEYAEALDNYEEALRLEENPNDRSYILYNMALIHASNGDHEKALGLYQEAIELN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P +P A NN+AVI H++GE+A G + AE+ FD+AAEYWKQAI L P NYIEAQNWLK
Sbjct: 103 PKMPSALNNIAVIYHFQGEKAKEAGQEDDAENLFDKAAEYWKQAIRLAPNNYIEAQNWLK 162
Query: 121 ITRRFE 126
IT R E
Sbjct: 163 ITGRSE 168
>pir||A05191 hypothetical protein 82 - common tobacco chloroplast
prf||1211235AE ORF 82 [Nicotiana tabacum]
Length = 82
Score = 162 bits (406), Expect = 1e-39
Identities = 75/76 (98%), Positives = 76/76 (99%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEGNYAEALQNYYEAMRLE+DPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN
Sbjct: 1 MSAQSEGNYAEALQNYYEAMRLEIDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Query: 61 PFLPQAFNNMAVICHY 76
PFLPQAFNNMAVICHY
Sbjct: 61 PFLPQAFNNMAVICHY 76
>gi|11467562 ORF179 [Odontella sinensis]
sp|P49525|YCF3_ODOSI HYPOTHETICAL 20.7 KD PROTEIN YCF3 (ORF179)
pir||S78367 conserved hypothetical protein 179 - Odontella sinensis chloroplast
emb|CAA91740.1| (Z67753) ORF179 [Odontella sinensis]
Length = 179
Score = 160 bits (400), Expect = 7e-39
Identities = 79/136 (58%), Positives = 100/136 (73%), Gaps = 12/136 (8%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
MSAQSEG YAEAL+NYYEA++LE DPYDRSY LYNIGLI+ +NG +++ALEYY +ALE N
Sbjct: 37 MSAQSEGKYAEALENYYEALQLEEDPYDRSYTLYNIGLIYGNNGNYSQALEYYHQALELN 96
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDS------------EIAESWFDQAAEYWKQAIALT 108
LPQA NN+AVI H +G A++ + E+A+ +FD+AAEYW+QA+ L
Sbjct: 97 SNLPQALNNIAVIYHSQGLNALQMQNQDKNLEIRNDEYLELAKEFFDKAAEYWRQALKLA 156
Query: 109 PGNYIEAQNWLKITRR 124
P NY AQNWLK+T R
Sbjct: 157 PDNYPGAQNWLKVTGR 172
>gi|11465584 unknown [Cyanidium caldarium]
gb|AAF13021.1|AF022186_195 (AF022186) unknown [Cyanidium caldarium]
Length = 173
Score = 156 bits (391), Expect = 8e-38
Identities = 74/124 (59%), Positives = 93/124 (74%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
M+AQSEG YAEAL YY+A+++E DP D+S+ILYNIGLI SNG+H +ALEYY +L+ N
Sbjct: 43 MAAQSEGEYAEALACYYQALKIEKDPMDKSFILYNIGLIQASNGQHARALEYYHESLKFN 102
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLK 120
P L QA NN+AVI HY G + Q + A+ FD+A+ YW++AI L P NYIEAQNWLK
Sbjct: 103 PNLVQALNNIAVIYHYYGNKLFEQSKLQEAKLMFDKASNYWRKAIKLAPYNYIEAQNWLK 162
Query: 121 ITRR 124
IT R
Sbjct: 163 ITGR 166
>dbj|BAB12706.1| (AP002746) hypothetical protein [Oryza sativa]
Length = 128
Score = 155 bits (388), Expect = 2e-37
Identities = 71/74 (95%), Positives = 73/74 (97%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPF 62
AQSEGNYAEALQNYYEA RLE+DPYDRSYILYNIGLIHT+NGEHTKALEYYFRALERNPF
Sbjct: 49 AQSEGNYAEALQNYYEATRLEIDPYDRSYILYNIGLIHTNNGEHTKALEYYFRALERNPF 108
Query: 63 LPQAFNNMAVICHY 76
LPQAFNNMAVICHY
Sbjct: 109 LPQAFNNMAVICHY 122
>pir||G82208 GGDEF family protein VC1367 [imported] - Vibrio cholerae (group O1
strain N16961)
gb|AAF94525.1| (AE004216) GGDEF family protein [Vibrio cholerae]
Length = 667
Score = 50.4 bits (118), Expect = 9e-06
Identities = 38/112 (33%), Positives = 56/112 (49%), Gaps = 17/112 (15%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALE-----RNP 61
G Y EALQ Y + L D D S I ++GL+ + G++ AL+Y +ALE NP
Sbjct: 205 GEYEEALQTYDLLLSLLPDYVDPSGIYNDVGLLMGTLGQYESALDYLNKALEYRLEQGNP 264
Query: 62 FLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYI 113
L +A + H G+ +QG E + +F+QA + LTP NY+
Sbjct: 265 LL------IAQVEHSLGDTYFKQGRYEESILYFEQAKAH------LTPANYL 304
>gb|AAC49446.1| (U62135) SPINDLY [Arabidopsis thaliana]
gb|AAG51433.1|AC008153_6 (AC008153) spindly (gibberellin signal transduction protein);
75377-80082 [Arabidopsis thaliana]
Length = 914
Score = 49.2 bits (115), Expect = 2e-05
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 2 SAQSEGNYAEALQNYYEAMRLEVDP-YDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
S + GN E +Q YYEA L++DP Y +Y YN+G++++ ++ AL Y +A
Sbjct: 161 SLKLAGNTQEGIQKYYEA--LKIDPHYAPAY--YNLGVVYSEMMQYDNALSCYEKAALER 216
Query: 61 PFLPQAFNNMAVICHYRGE 79
P +A+ NM VI RG+
Sbjct: 217 PMYAEAYCNMGVIYKNRGD 235
Score = 34.0 bits (76), Expect = 0.73
Identities = 34/132 (25%), Positives = 54/132 (40%), Gaps = 31/132 (23%)
Query: 8 NYAEALQNYYEAMRLEVDPYDRSYILY---------------NIGLIHTSNGEHTKALEY 52
+YA+A+ N A E+ +D + + Y N+G+++ KA+E
Sbjct: 293 HYADAMYNLGVAYG-EMLKFDMAIVFYELAFHFNPHCAEACNNLGVLYKDRDNLDKAVEC 351
Query: 53 YFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNY 112
Y AL P Q+ NN+ V+ +G+ D AA ++AI P Y
Sbjct: 352 YQMALSIKPNFAQSLNNLGVVYTVQGK--------------MDAAASMIEKAILANP-TY 396
Query: 113 IEAQNWLKITRR 124
EA N L + R
Sbjct: 397 AEAFNNLGVLYR 408
>emb|CAA76834.1| (Y17720) SPINDLY protein [Petunia x hybrida]
Length = 932
Score = 47.6 bits (111), Expect = 6e-05
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 3/78 (3%)
Query: 2 SAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNP 61
S + GN E +Q YYEA++++ Y +Y YN+G++++ ++ AL Y +A P
Sbjct: 166 SLKLAGNSQEGIQKYYEAIKID-SHYAPAY--YNLGVVYSEMMQYDMALNCYEKAAIERP 222
Query: 62 FLPQAFNNMAVICHYRGE 79
+A+ NM VI RG+
Sbjct: 223 MYAEAYCNMGVIYKNRGD 240
Score = 41.4 bits (95), Expect = 0.004
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 8/105 (7%)
Query: 9 YAEALQ-----NYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
Y+E +Q N YE +E Y +Y N+G+I+ + G+ A+ Y R L +P
Sbjct: 201 YSEMMQYDMALNCYEKAAIERPMYAEAYC--NMGVIYKNRGDLESAIACYERCLAVSPNF 258
Query: 64 PQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEY-WKQAIAL 107
A NNMA+ G + +GD +++ +A Y W A A+
Sbjct: 259 EIAKNNMAIALTDLGTKVKLEGDINQGVAYYKKALYYNWHYADAM 303
Score = 35.2 bits (79), Expect = 0.33
Identities = 35/132 (26%), Positives = 54/132 (40%), Gaps = 31/132 (23%)
Query: 8 NYAEALQNYYEAMRLEVDPYDRSYILY---------------NIGLIHTSNGEHTKALEY 52
+YA+A+ N A E+ +D + + Y N+G+I+ KA+E
Sbjct: 298 HYADAMYNLGVAYG-EMLKFDMAIVFYELAFHFNPHCAEACNNLGVIYKDRDNLDKAVEC 356
Query: 53 YFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNY 112
Y AL P Q+ NN+ V+ +G+ D AA ++AI P Y
Sbjct: 357 YQMALTIKPNFSQSLNNLGVVYTVQGK--------------MDAAASMIEKAIIANP-TY 401
Query: 113 IEAQNWLKITRR 124
EA N L + R
Sbjct: 402 AEAYNNLGVLYR 413
Score = 34.0 bits (76), Expect = 0.73
Identities = 28/112 (25%), Positives = 51/112 (45%), Gaps = 17/112 (15%)
Query: 8 NYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAF 67
N +A++ Y M L + P + S L N+G+++T G+ A +A+ NP +A+
Sbjct: 349 NLDKAVECYQ--MALTIKP-NFSQSLNNLGVVYTVQGKMDAAASMIEKAIIANPTYAEAY 405
Query: 68 NNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWL 119
NN+ V+ G ++ A E ++Q + + P + QN L
Sbjct: 406 NNLGVLYRDAGNISL--------------AIEAYEQCLKIDPDSRNAGQNRL 443
>gb|AAF55179.1| (AE003708) CG5038 gene product [Drosophila melanogaster]
Length = 705
Score = 44.9 bits (104), Expect = 4e-04
Identities = 32/127 (25%), Positives = 62/127 (48%), Gaps = 23/127 (18%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPF 62
A GN +A Q+Y+ A+ L + Y+ + L N+G ++ +G+ + A EY AL+ P
Sbjct: 454 ATDMGNNTKAFQHYHRAIELYPN-YESA--LMNLGNLYREHGQLSTAEEYIRLALQAYPA 510
Query: 63 LPQAFNNMAVICHYRG---------EQAIR-----------QGDSEIAESWFDQAAEYWK 102
P A+ N+ ++ +G E+A++ G+ + + + +A +W+
Sbjct: 511 FPAAWMNLGIVQSAQGKYDKALASYEKALKYRANFAVCYYNMGNLYLEQKRYAEALHHWQ 570
Query: 103 QAIALTP 109
A+AL P
Sbjct: 571 HAVALNP 577
Score = 36.7 bits (83), Expect = 0.11
Identities = 20/58 (34%), Positives = 31/58 (52%), Gaps = 1/58 (1%)
Query: 22 LEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGE 79
L+V P D + + YNI + T G +TKA ++Y RA+E P A N+ + G+
Sbjct: 437 LQVCP-DNAKVHYNIARLATDMGNNTKAFQHYHRAIELYPNYESALMNLGNLYREHGQ 493
Score = 36.4 bits (82), Expect = 0.14
Identities = 19/76 (25%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 5 SEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLP 64
++G Y +AL +Y +A++ + + YN+G ++ + +AL ++ A+ NP P
Sbjct: 524 AQGKYDKALASYEKALKYRAN---FAVCYYNMGNLYLEQKRYAEALHHWQHAVALNPRQP 580
Query: 65 QAFNNMAVICHYRGEQ 80
+A+ N+ + +G Q
Sbjct: 581 KAWANILTMLDNKGLQ 596
>gb|AAF26789.1|AC016829_13 (AC016829) putative O-linked GlcNAc transferase [Arabidopsis
thaliana]
Length = 977
Score = 44.5 bits (103), Expect = 5e-04
Identities = 33/111 (29%), Positives = 57/111 (50%), Gaps = 18/111 (16%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
G+ ALQ Y EA++L+ + +Y+ N+G ++ + G T+A+ Y AL+ P A
Sbjct: 237 GDLNRALQYYKEAVKLK-PAFPDAYL--NLGNVYKALGRPTEAIMCYQHALQMRPNSAMA 293
Query: 67 FNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQN 117
F N+A I + +G+ D A ++KQA++ P ++EA N
Sbjct: 294 FGNIASIYYEQGQ--------------LDLAIRHYKQALSRDP-RFLEAYN 329
Score = 32.8 bits (73), Expect = 1.6
Identities = 25/105 (23%), Positives = 46/105 (43%), Gaps = 17/105 (16%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
G EA+ Y A+++ + + NI I+ G+ A+ +Y +AL R+P +A
Sbjct: 271 GRPTEAIMCYQHALQMRPNS---AMAFGNIASIYYEQGQLDLAIRHYKQALSRDPRFLEA 327
Query: 67 FNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGN 111
+NN+ G++ D+A + Q +AL P +
Sbjct: 328 YNNL--------------GNALKDIGRVDEAVRCYNQCLALQPNH 358
>pir||E70463 conserved hypothetical protein aq_1896 - Aquifex aeolicus
gb|AAC07708.1| (AE000762) hypothetical protein [Aquifex aeolicus]
Length = 342
Score = 42.6 bits (98), Expect = 0.002
Identities = 34/141 (24%), Positives = 68/141 (48%), Gaps = 28/141 (19%)
Query: 8 NYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAF 67
NY+EA+ N+++A+R D I +GL + E+ KA E + +AL NP +A
Sbjct: 40 NYSEAIANFHKALRANP---DEPRIWNALGLAYMEAKEYKKAEESFKKALSINPNYSEAR 96
Query: 68 NNMAVICHYRG--EQAIRQGDSEIAESWFDQAAE--------------------YWKQAI 105
N+ ++ + G E+A++ + ++++ E Y ++A+
Sbjct: 97 KNLGILYYKLGRYEEALKYLQEAANDEYYEKKHEAFYYLAKVYEAKQDLKNYVRYLEKAV 156
Query: 106 ALTPGNYIEAQNWLKITRRFE 126
A P N+++AQ L++ + +E
Sbjct: 157 AYNP-NFVQAQ--LELAQAYE 174
>pir||S75991 hypothetical protein - Synechocystis sp. (strain PCC 6803)
dbj|BAA10838.1| (D64006) hypothetical protein [Synechocystis sp.]
Length = 948
Score = 42.6 bits (98), Expect = 0.002
Identities = 33/113 (29%), Positives = 53/113 (46%), Gaps = 23/113 (20%)
Query: 5 SEGNYAEALQNYYEAMRLEVDPYDR---SYILYNIGLIHTSNGEHTKALEYYFRALERNP 61
S G EAL Y EA+++ + DR IL NIG ++ GE +A++YY +AL
Sbjct: 359 SVGEKDEALTYYKEALKISQETGDRLVEGAILSNIGYVYDGLGELNQAMDYYQQALVLRR 418
Query: 62 FLPQ------AFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALT 108
+ NN+ I + R + +DQA Y++QA++L+
Sbjct: 419 EIKDRDGEALTLNNIGTIYYARED--------------YDQALNYYEQALSLS 457
Score = 37.5 bits (85), Expect = 0.064
Identities = 25/54 (46%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYI---LYNIGLIHTSNGEHTKALEYYFRAL 57
G +ALQ Y EA+ L D I L NIGL + + GE KALEYY AL
Sbjct: 201 GESEKALQYYAEALALGKSLNDLETIGTSLSNIGLAYNNLGEREKALEYYQEAL 254
Score = 37.1 bits (84), Expect = 0.084
Identities = 31/110 (28%), Positives = 49/110 (44%), Gaps = 23/110 (20%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDR---SYILYNIGLIHTSNGEHTKALEYYF------RAL 57
G +AL+ Y EA+ + DR + L NI L++ GE KAL+YY A+
Sbjct: 241 GEREKALEYYQEALTMSRSVGDRQGEAVRLNNIALVYDGFGEKDKALQYYIESLIIAEAV 300
Query: 58 ERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIAL 107
+N+A++ G++A QA EY++QA+ L
Sbjct: 301 GDQSLQGSVISNIALVLDGLGQKA--------------QALEYYQQALEL 336
Score = 35.6 bits (80), Expect = 0.25
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 23/111 (20%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSY---ILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
G +ALQ Y E++ + D+S ++ NI L+ G+ +ALEYY +ALE +
Sbjct: 281 GEKDKALQYYIESLIIAEAVGDQSLQGSVISNIALVLDGLGQKAQALEYYQQALELARLV 340
Query: 64 PQ------AFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALT 108
NN+A++ GE+ D+A Y+K+A+ ++
Sbjct: 341 GDRSGEGIRLNNIALLYDSVGEK--------------DEALTYYKEALKIS 377
>gb|AAC36055.1| (AF035820) gibberellin action negative regulator SPY [Hordeum
vulgare]
Length = 944
Score = 42.2 bits (97), Expect = 0.003
Identities = 29/79 (36%), Positives = 42/79 (52%), Gaps = 5/79 (6%)
Query: 2 SAQSEGNYAEALQNYYEAMRLEVDP-YDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
S + GN + +Q Y EA LEVD Y +Y YN+G++++ + AL Y +A
Sbjct: 152 SLKLAGNTEDGIQKYCEA--LEVDSHYAPAY--YNLGVVYSEMMQFDVALTCYEKAALER 207
Query: 61 PFLPQAFNNMAVICHYRGE 79
P +A+ NM VI RGE
Sbjct: 208 PLYAEAYCNMGVIYKNRGE 226
Score = 39.5 bits (90), Expect = 0.017
Identities = 32/105 (30%), Positives = 49/105 (46%), Gaps = 8/105 (7%)
Query: 9 YAEALQ-----NYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
Y+E +Q YE LE Y +Y N+G+I+ + GE A+ Y R L +P
Sbjct: 187 YSEMMQFDVALTCYEKAALERPLYAEAYC--NMGVIYKNRGELDAAIACYDRCLTISPNF 244
Query: 64 PQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEY-WKQAIAL 107
A NNMA+ G + +GD +++ +A Y W A A+
Sbjct: 245 EIAKNNMAIALTDLGTKVKIEGDINQGVAYYKKALFYNWHYADAM 289
Score = 35.2 bits (79), Expect = 0.33
Identities = 27/90 (30%), Positives = 39/90 (43%), Gaps = 15/90 (16%)
Query: 35 NIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWF 94
N+G+I+ KA+E Y AL P Q+ NN+ V+ +G+
Sbjct: 325 NLGVIYKDRDNLDKAVECYQMALSIKPNFSQSLNNLGVVYTVQGK--------------M 370
Query: 95 DQAAEYWKQAIALTPGNYIEAQNWLKITRR 124
D AA ++AI P Y EA N L + R
Sbjct: 371 DAAASMIEKAILANP-TYAEAYNNLGVLYR 399
Score = 32.8 bits (73), Expect = 1.6
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 8 NYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAF 67
N +A++ Y M L + P + S L N+G+++T G+ A +A+ NP +A+
Sbjct: 335 NLDKAVECYQ--MALSIKP-NFSQSLNNLGVVYTVQGKMDAAASMIEKAILANPTYAEAY 391
Query: 68 NNMAVI 73
NN+ V+
Sbjct: 392 NNLGVL 397
Score = 31.7 bits (70), Expect = 3.7
Identities = 23/89 (25%), Positives = 41/89 (45%), Gaps = 15/89 (16%)
Query: 33 LYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAES 92
+YN+G+ + A+ +Y AL NP +A NN+ VI R
Sbjct: 289 MYNLGVAYGEMLNFEMAIVFYELALHFNPRCAEACNNLGVIYKDRDN------------- 335
Query: 93 WFDQAAEYWKQAIALTPGNYIEAQNWLKI 121
D+A E ++ A+++ P N+ ++ N L +
Sbjct: 336 -LDKAVECYQMALSIKP-NFSQSLNNLGV 362
>pir||F69210 conserved hypothetical protein MTH83 - Methanobacterium
thermoautotrophicum (strain Delta H)
gb|AAB84589.1| (AE000799) O-linked GlcNAc transferase [Methanothermobacter
thermautotrophicus]
Length = 379
Score = 42.2 bits (97), Expect = 0.003
Identities = 31/109 (28%), Positives = 54/109 (49%), Gaps = 19/109 (17%)
Query: 2 SAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYN-IGLIHTSNGEHTKALEYYFRALERN 60
S+ +G Y EAL+ + +A++ P + + YN I L+ E KALE Y + L+ N
Sbjct: 25 SSLKQGKYKEALKEFRKALKAR--PNNPEILHYNAITLLKLKRPE--KALECYEKILKNN 80
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTP 109
P L +A+NN ++ G +D+A E +++A+ + P
Sbjct: 81 PKLAEAWNNKGLVLKELGR--------------YDEALECYEKALKINP 115
Score = 41.4 bits (95), Expect = 0.004
Identities = 35/130 (26%), Positives = 64/130 (48%), Gaps = 24/130 (18%)
Query: 9 YAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFN 68
Y EAL+ Y + ++L D+++ N GL+ G + ++LE Y +AL+ NP L +A+N
Sbjct: 202 YEEALKCYDKVLQLNPQD-DKAW--NNKGLVFNELGRYDESLECYEKALQINPKLAEAWN 258
Query: 69 NMAVICHYRG--EQAIR------QGDSEIAESW------------FDQAAEYWKQAIALT 108
N V+ G E+A+ + D E ++W + A E +++A+ +
Sbjct: 259 NKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECFQKALEIN 318
Query: 109 PGNYIEAQNW 118
P + +A W
Sbjct: 319 P-EFADAWKW 327
Score = 38.7 bits (88), Expect = 0.029
Identities = 29/99 (29%), Positives = 51/99 (51%), Gaps = 22/99 (22%)
Query: 35 NIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRG---------EQAIRQG 85
N GL+ G + +ALE Y +AL+ NP A+NN A++ G E+A+ Q
Sbjct: 89 NKGLVLKELGRYDEALECYEKALKINPKYAGAWNNKALVLKELGRYDEALECYEKAL-QI 147
Query: 86 DSEIAESWFD------------QAAEYWKQAIALTPGNY 112
+ ++A++W++ +A + +++AI L P NY
Sbjct: 148 NPKLADAWYNKGSVLIYLKKYKKALKCFEKAIELNPKNY 186
Score = 37.9 bits (86), Expect = 0.049
Identities = 26/67 (38%), Positives = 36/67 (52%), Gaps = 3/67 (4%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
G Y EAL+ Y +A LE+DP D N GL+ G++ ALE + +ALE NP A
Sbjct: 268 GRYEEALECYEKA--LEIDPEDDK-TWNNKGLVLEELGKYKDALECFQKALEINPEFADA 324
Query: 67 FNNMAVI 73
+ +I
Sbjct: 325 WKWKGII 331
Score = 30.9 bits (68), Expect = 6.3
Identities = 20/69 (28%), Positives = 35/69 (49%), Gaps = 3/69 (4%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
G Y EAL+ Y +A+++ D YN G + ++ KAL+ + +A+E NP +A
Sbjct: 132 GRYDEALECYEKALQINPKLADA---WYNKGSVLIYLKKYKKALKCFEKAIELNPKNYRA 188
Query: 67 FNNMAVICH 75
+ + H
Sbjct: 189 WGTKGITLH 197
>pir||E69190 conserved hypothetical protein MTH68 - Methanobacterium
thermoautotrophicum (strain Delta H)
Length = 228
Score = 41.4 bits (95), Expect = 0.004
Identities = 35/130 (26%), Positives = 64/130 (48%), Gaps = 24/130 (18%)
Query: 9 YAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFN 68
Y EAL+ Y + ++L D+++ N GL+ G + ++LE Y +AL+ NP L +A+N
Sbjct: 51 YEEALKCYDKVLQLNPQD-DKAW--NNKGLVFNELGRYDESLECYEKALQINPKLAEAWN 107
Query: 69 NMAVICHYRG--EQAIR------QGDSEIAESW------------FDQAAEYWKQAIALT 108
N V+ G E+A+ + D E ++W + A E +++A+ +
Sbjct: 108 NKGVVLSELGRYEEALECYEKALEIDPEDDKTWNNKGLVLEELGKYKDALECFQKALEIN 167
Query: 109 PGNYIEAQNW 118
P + +A W
Sbjct: 168 P-EFADAWKW 176
Score = 37.9 bits (86), Expect = 0.049
Identities = 26/67 (38%), Positives = 36/67 (52%), Gaps = 3/67 (4%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
G Y EAL+ Y +A LE+DP D N GL+ G++ ALE + +ALE NP A
Sbjct: 117 GRYEEALECYEKA--LEIDPEDDK-TWNNKGLVLEELGKYKDALECFQKALEINPEFADA 173
Query: 67 FNNMAVI 73
+ +I
Sbjct: 174 WKWKGII 180
>sp|O67178|YA88_AQUAE HYPOTHETICAL PROTEIN AQ_1088
pir||G70393 conserved hypothetical protein aq_1088 - Aquifex aeolicus
gb|AAC07141.1| (AE000722) hypothetical protein [Aquifex aeolicus]
Length = 761
Score = 41.0 bits (94), Expect = 0.006
Identities = 26/69 (37%), Positives = 41/69 (58%), Gaps = 3/69 (4%)
Query: 5 SEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLP 64
S+G EA Q+Y+E L ++P ++ ILYN+G++H + GE KAL+ + RAL P
Sbjct: 115 SQGKLEEA-QHYWERA-LSLNP-NKVEILYNLGVLHLNKGELEKALDLFERALRLKPDFR 171
Query: 65 QAFNNMAVI 73
+A +I
Sbjct: 172 EAEEKKTLI 180
>pir||B69196 conserved hypothetical protein MTH72 - Methanobacterium
thermoautotrophicum (strain Delta H)
gb|AAB84576.1| (AE000798) O-linked GlcNAc transferase [Methanothermobacter
thermautotrophicus]
Length = 403
Score = 40.6 bits (93), Expect = 0.007
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 19/109 (17%)
Query: 2 SAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYN-IGLIHTSNGEHTKALEYYFRALERN 60
S+ +G Y EAL+ + +A L+ P D + YN + L+ E KAL+ Y + L+ N
Sbjct: 25 SSLKQGKYKEALKEFRKA--LKASPNDPEILHYNAMTLLKLKRPE--KALKCYEKILKNN 80
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTP 109
P L +A+NN V+ E+ +D+A E +++A+ + P
Sbjct: 81 PKLAEAWNNKGVVL------------KELKR--YDEALECYERALQIDP 115
Score = 37.5 bits (85), Expect = 0.064
Identities = 36/130 (27%), Positives = 63/130 (47%), Gaps = 24/130 (18%)
Query: 9 YAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFN 68
Y EAL+ Y A L++DP D N G + + G+ KA+E Y +ALE N +A+N
Sbjct: 202 YDEALECYGRA--LQIDPQDDG-TWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWN 258
Query: 69 NMAVICH--YRGEQAIR------QGDSEIAESW------------FDQAAEYWKQAIALT 108
N V+ R ++A+ + + E E+W +++A E +++A+ +
Sbjct: 259 NKGVVLEELKRYDEALECYEKALEINLENDETWANKGVLLRKLGKYEEALECFEKALEIN 318
Query: 109 PGNYIEAQNW 118
P + +A W
Sbjct: 319 P-EFADAWEW 327
Score = 34.8 bits (78), Expect = 0.43
Identities = 33/128 (25%), Positives = 60/128 (46%), Gaps = 23/128 (17%)
Query: 4 QSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
+S G Y EAL+ Y +A+++ + + YN LI + +ALE Y RAL+ +P
Sbjct: 163 RSLGKYEEALECYEKALQINAEFVEA---WYNKALIFEELKRYDEALECYGRALQIDPQD 219
Query: 64 PQAFNNMAVICHYRG--EQAIR------QGDSEIAESW------------FDQAAEYWKQ 103
+NN + G E+AI + + + A++W +D+A E +++
Sbjct: 220 DGTWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWNNKGVVLEELKRYDEALECYEK 279
Query: 104 AIALTPGN 111
A+ + N
Sbjct: 280 ALEINLEN 287
Score = 34.4 bits (77), Expect = 0.56
Identities = 31/97 (31%), Positives = 49/97 (49%), Gaps = 11/97 (11%)
Query: 9 YAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFN 68
Y EAL+ Y A L++DP D N G + + G+ KA+E Y +ALE N +A+
Sbjct: 100 YDEALECYERA--LQIDPQDDG-TWNNKGALLDTIGKPEKAIECYEKALEINQKNAKAWY 156
Query: 69 NMAVICHYRG--EQAIR------QGDSEIAESWFDQA 97
N G E+A+ Q ++E E+W+++A
Sbjct: 157 NKGNGLRSLGKYEEALECYEKALQINAEFVEAWYNKA 193
Score = 30.9 bits (68), Expect = 6.3
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 3/65 (4%)
Query: 9 YAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFN 68
Y EAL+ Y +A+ + ++ D ++ N G++ G++ +ALE + +ALE NP A+
Sbjct: 270 YDEALECYEKALEINLEN-DETWA--NKGVLLRKLGKYEEALECFEKALEINPEFADAWE 326
Query: 69 NMAVI 73
+I
Sbjct: 327 WKGII 331
>gb|AAK01173.1|AF314195_1 (AF314195) OSM-5 [Caenorhabditis elegans]
Length = 820
Score = 39.9 bits (91), Expect = 0.013
Identities = 30/89 (33%), Positives = 44/89 (48%), Gaps = 3/89 (3%)
Query: 11 EALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNM 70
EAL Y +R ++ P + + NIG IH E TKAL+YY AL++ P + + +
Sbjct: 204 EALNTYEIIVRNKMFP-NSGRLKVNIGNIHFRKREFTKALKYYRMALDQVPSIQK--DTR 260
Query: 71 AVICHYRGEQAIRQGDSEIAESWFDQAAE 99
I + G +R G + A S FD E
Sbjct: 261 IKILNNIGVTFVRMGSYDDAISTFDHCVE 289
Score = 31.7 bits (70), Expect = 3.7
Identities = 31/111 (27%), Positives = 48/111 (42%), Gaps = 21/111 (18%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPF 62
A G+ +AL NY EA+ + L+NIGL + G +ALE++++
Sbjct: 483 AYMNGDLDKALNNYREALNNDASCVQA---LFNIGLTAKAQGNLEQALEFFYK------L 533
Query: 63 LPQAFNNMAVICHYRGEQAIRQGDSEIAESWFD--QAAEYWKQAIALTPGN 111
NN+ V+ + I ES D QA E + QA +L P +
Sbjct: 534 HGILLNNVQVLVQL----------ASIYESLEDSAQAIELYSQANSLVPND 574
>gb|AAF60551.1| (AC006761) contains similarity to Pfam domain PF00515 (TPR Domain),
Score=51.1, E=2.4e-11, N=4; similar to Mus musculus
polycystic kidney disease-related protein (GB:L31959)
[Caenorhabditis elegans]
Length = 828
Score = 39.9 bits (91), Expect = 0.013
Identities = 30/89 (33%), Positives = 44/89 (48%), Gaps = 3/89 (3%)
Query: 11 EALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNM 70
EAL Y +R ++ P + + NIG IH E TKAL+YY AL++ P + + +
Sbjct: 204 EALNTYEIIVRNKMFP-NSGRLKVNIGNIHFRKREFTKALKYYRMALDQVPSIQK--DTR 260
Query: 71 AVICHYRGEQAIRQGDSEIAESWFDQAAE 99
I + G +R G + A S FD E
Sbjct: 261 IKILNNIGVTFVRMGSYDDAISTFDHCVE 289
Score = 31.7 bits (70), Expect = 3.7
Identities = 31/111 (27%), Positives = 48/111 (42%), Gaps = 21/111 (18%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPF 62
A G+ +AL NY EA+ + L+NIGL + G +ALE++++
Sbjct: 483 AYMNGDLDKALNNYREALNNDASCVQA---LFNIGLTAKAQGNLEQALEFFYK------L 533
Query: 63 LPQAFNNMAVICHYRGEQAIRQGDSEIAESWFD--QAAEYWKQAIALTPGN 111
NN+ V+ + I ES D QA E + QA +L P +
Sbjct: 534 HGILLNNVQVLVQL----------ASIYESLEDSAQAIELYSQANSLVPND 574
>sp|Q58741|YD45_METJA HYPOTHETICAL PROTEIN MJ1345
pir||H64467 hypothetical protein MJ1345 - Methanococcus jannaschii
gb|AAB99354.1| (U67574) O-linked GlnNAc transferase [Methanococcus jannaschii]
Length = 314
Score = 39.5 bits (90), Expect = 0.017
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
G +AL+ Y L+++P D LY G+I G++ +A++Y+ + LE NP +P A
Sbjct: 229 GRLNQALE--YTKKALKLNPDDPLLYLYK-GIILNKLGKYNEAIKYFDKVLEINPNIPDA 285
Query: 67 FNNMAVICHYRGE 79
+N A+ G+
Sbjct: 286 WNGKAIALEKLGK 298
>gb|AAF46676.1| (AE003453) CG4050 gene product [Drosophila melanogaster]
Length = 870
Score = 39.1 bits (89), Expect = 0.022
Identities = 31/121 (25%), Positives = 55/121 (44%), Gaps = 26/121 (21%)
Query: 10 AEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNN 69
A+A + Y +A+ + + D I YN+G++ G+ +A Y+ +A+E P QA N
Sbjct: 592 AQAQEVYEQALLYDNENAD---IYYNLGVVFLEQGKSQQAQVYFNKAIELYPEHEQALLN 648
Query: 70 MAVICHYRGEQAIRQ-----------------------GDSEIAESWFDQAAEYWKQAIA 106
A++ G + R+ G + ES FD+A +++K+AI
Sbjct: 649 SAILLQELGGEEARRVSRSRLYKVLENDDQNEKVYFNLGMLAMDESSFDEAEQFFKRAIH 708
Query: 107 L 107
L
Sbjct: 709 L 709
>gb|AAD55431.1|AF181645_1 (AF181645) BcDNA.GH12144 [Drosophila melanogaster]
gb|AAF51432.1| (AE003587) BcDNA:GH12144 gene product [Drosophila melanogaster]
Length = 938
Score = 39.1 bits (89), Expect = 0.022
Identities = 21/68 (30%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 5 SEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLP 64
S+G Y EA Q EA+R + D + +N+G++H + + A+E + RA++ P L
Sbjct: 614 SQGRYEEAKQVLQEAIRFRPNMAD---VHFNLGILHQNQQVYPAAVECFQRAIKFRPNLA 670
Query: 65 QAFNNMAV 72
A+ N+ +
Sbjct: 671 VAYLNLGI 678
>pir||C70121 hypothetical protein BB0171 - Lyme disease spirochete
gb|AAC66567.1| (AE001128) B. burgdorferi predicted coding region BB0171 [Borrelia
burgdorferi]
Length = 195
Score = 38.7 bits (88), Expect = 0.029
Identities = 27/107 (25%), Positives = 49/107 (45%), Gaps = 17/107 (15%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNP-FLPQ 65
GNY A+ NYY + D ++ YN+G+++ S GE+ +L + A + N FL
Sbjct: 40 GNYQNAISNYYNLVE---DEKYSAWGYYNLGVVYYSLGEYESSLRIFSYAKKTNDIFLNF 96
Query: 66 AFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNY 112
N + +Y + + +A +K+A+ + PG+Y
Sbjct: 97 NVNYNEGVIYYN-------------QGLYHKAEVAFKEALKINPGSY 130
>pir||E69078 conserved hypothetical protein MTH1585 - Methanobacterium
thermoautotrophicum (strain Delta H)
gb|AAB86058.1| (AE000918) O-linked GlcNAc transferase [Methanothermobacter
thermautotrophicus]
Length = 351
Score = 38.3 bits (87), Expect = 0.038
Identities = 33/111 (29%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
G ++++ Y A+R +DP D YIL +G T G +ALE Y RA+ P P
Sbjct: 112 GKFSKSELCYTAALR--IDPND-VYILNRLGDNLTRLGRFDEALENYRRAIMIEPENPYI 168
Query: 67 FNNMAVICHYRG--EQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEA 115
+NNMA+ G ++A+ + + + D YW+ + G +EA
Sbjct: 169 WNNMAITLLNAGRVDEALEASERAL-KIKHDPDLLYWRGVMLEVAGKPLEA 218
>emb|CAB94590.1| (AL359214) hypothetical protein SC7E4.02 [Streptomyces coelicolor
A3(2)]
Length = 607
Score = 37.1 bits (84), Expect = 0.084
Identities = 23/66 (34%), Positives = 34/66 (50%), Gaps = 9/66 (13%)
Query: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESW 93
YN+GL+ G T+A ++Y RA +A N +A++ +R GD AE W
Sbjct: 323 YNLGLLCAEQGRTTQAEQWYRRAAYAGH--REASNALAILL-------LRAGDESGAEPW 373
Query: 94 FDQAAE 99
F +AAE
Sbjct: 374 FSKAAE 379
>pir||E70317 hypothetical protein aq_183 - Aquifex aeolicus
gb|AAC06531.1| (AE000677) putative protein [Aquifex aeolicus]
Length = 397
Score = 37.1 bits (84), Expect = 0.084
Identities = 22/88 (25%), Positives = 46/88 (52%), Gaps = 4/88 (4%)
Query: 11 EALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL-PQAFNN 69
+ L++Y+E + + V+ Y + LY GL+ G+ +A++ Y +++E NP+ P +
Sbjct: 42 KVLKSYFENLNITVEDYVK---LYTEGLLLEKEGKLKEAIQAYLKSIELNPYYNPSYYRF 98
Query: 70 MAVICHYRGEQAIRQGDSEIAESWFDQA 97
+I ++ R+ +I E F +A
Sbjct: 99 NFLIRKVENKEIYREKIRKILEKRFKEA 126
>gb|AAD30860.1|AF116251_3 (AF116251) BatC [Bacteroides fragilis]
Length = 238
Score = 36.7 bits (83), Expect = 0.11
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 9 YAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFN 68
+ +A++ Y A +E D I +N+G++ S ++ KA+E Y +L NP +
Sbjct: 77 FKDAMEQYVAATSIEKDKAKLGQIYHNMGVLFQSGKDYQKAVEAYKMSLRNNPKDDETRY 136
Query: 69 NMAV 72
N+A+
Sbjct: 137 NLAL 140
>emb|CAA06012.1| (AJ003222) hypothetical protein [Borrelia burgdorferi]
Length = 152
Score = 36.4 bits (82), Expect = 0.14
Identities = 26/107 (24%), Positives = 48/107 (44%), Gaps = 17/107 (15%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNP-FLPQ 65
GNY A+ NYY + D ++ YN+G+++ S GE+ +L + A + N FL
Sbjct: 40 GNYQNAISNYYNLVE---DEKYSAWGYYNLGVVYYSLGEYESSLRIFSYAKKTNDIFLNF 96
Query: 66 AFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNY 112
N + +Y + + +A +K+A+ + P +Y
Sbjct: 97 NVNYNEGVIYYN-------------QGLYHKAEVAFKEALKINPSSY 130
>gb|AAB63465.1| (U77412) O-linked GlcNAc transferase [Caenorhabditis elegans]
Length = 1151
Score = 35.2 bits (79), Expect = 0.33
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 20/125 (16%)
Query: 5 SEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLP 64
S G+ +A+ Y+ A+++ D Y + ++G + + G +A Y +A+E P
Sbjct: 239 SGGDLEQAVTAYFNALQINPDLY---CVRSDLGNLLKAMGRLEEAKVCYLKAIETQPQFA 295
Query: 65 QAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPG---NYIEAQNWLKI 121
A++N+ + + +G E W A ++++A+ L P YI N LK
Sbjct: 296 VAWSNLGCVFNSQG------------EIWL--AIHHFEKAVTLDPNFLDAYINLGNVLKE 341
Query: 122 TRRFE 126
R F+
Sbjct: 342 ARIFD 346
Score = 34.0 bits (76), Expect = 0.73
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 QSEGNYAEALQNYYEAMRLE---VDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Q +G +A+ +Y EA+R+ D Y N+G G+ + A+ Y RA++ N
Sbjct: 476 QQQGKLNDAILHYKEAIRIAPTFADAYS------NMGNTLKEMGDSSAAIACYNRAIQIN 529
Query: 61 PFLPQAFNNMAVICHYRGEQA 81
P A +N+A I G A
Sbjct: 530 PAFADAHSNLASIHKDAGNMA 550
Score = 31.3 bits (69), Expect = 4.8
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 17/106 (16%)
Query: 4 QSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
+ +G+ EA Q Y +A+ L D L NI G+ A Y +ALE P
Sbjct: 408 KEKGSVVEAEQMYMKALELCPTHADSQNNLANI---KREQGKIEDATRLYLKALEIYPEF 464
Query: 64 PQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTP 109
A +N+A I +G+ + A ++K+AI + P
Sbjct: 465 AAAHSNLASILQQQGK--------------LNDAILHYKEAIRIAP 496
>pir||A69689 response regulator aspartate phosphatase rapF - Bacillus subtilis
emb|CAB02500.1| (Z80360) Unknown, highly similar to B. subtilis RapA and RapB
aspartyl-phosphate phosphatases [Bacillus subtilis]
emb|CAB15773.1| (Z99123) response regulator aspartate phosphatase [Bacillus
subtilis]
Length = 381
Score = 35.2 bits (79), Expect = 0.33
Identities = 26/78 (33%), Positives = 40/78 (50%), Gaps = 10/78 (12%)
Query: 9 YAEALQNYYEAMRL---EVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRAL----ERN- 60
Y +A+ ++ +A + E P LYNIGL S ++ A+ Y+ RA+ E N
Sbjct: 198 YEDAISHFQKAYSMAEAEKQPQLMGRTLYNIGLCKNSQSQYEDAIPYFKRAIAVFEESNI 257
Query: 61 -PFLPQAFNNMAVICHYR 77
P LPQA+ + I HY+
Sbjct: 258 LPSLPQAYFLITQI-HYK 274
>gb|AAA62535.1| (U21320) contains TPR domain-like repeats [Caenorhabditis elegans]
Length = 1194
Score = 35.2 bits (79), Expect = 0.33
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 20/125 (16%)
Query: 5 SEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLP 64
S G+ +A+ Y+ A+++ D Y + ++G + + G +A Y +A+E P
Sbjct: 282 SGGDLEQAVTAYFNALQINPDLY---CVRSDLGNLLKAMGRLEEAKVCYLKAIETQPQFA 338
Query: 65 QAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPG---NYIEAQNWLKI 121
A++N+ + + +G E W A ++++A+ L P YI N LK
Sbjct: 339 VAWSNLGCVFNSQG------------EIWL--AIHHFEKAVTLDPNFLDAYINLGNVLKE 384
Query: 122 TRRFE 126
R F+
Sbjct: 385 ARIFD 389
Score = 34.0 bits (76), Expect = 0.73
Identities = 24/81 (29%), Positives = 38/81 (46%), Gaps = 9/81 (11%)
Query: 4 QSEGNYAEALQNYYEAMRLE---VDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Q +G +A+ +Y EA+R+ D Y N+G G+ + A+ Y RA++ N
Sbjct: 519 QQQGKLNDAILHYKEAIRIAPTFADAYS------NMGNTLKEMGDSSAAIACYNRAIQIN 572
Query: 61 PFLPQAFNNMAVICHYRGEQA 81
P A +N+A I G A
Sbjct: 573 PAFADAHSNLASIHKDAGNMA 593
Score = 31.3 bits (69), Expect = 4.8
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 17/106 (16%)
Query: 4 QSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
+ +G+ EA Q Y +A+ L D L NI G+ A Y +ALE P
Sbjct: 451 KEKGSVVEAEQMYMKALELCPTHADSQNNLANI---KREQGKIEDATRLYLKALEIYPEF 507
Query: 64 PQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTP 109
A +N+A I +G+ + A ++K+AI + P
Sbjct: 508 AAAHSNLASILQQQGK--------------LNDAILHYKEAIRIAP 539
>dbj|BAB30817.1| (AK017580) putative [Mus musculus]
Length = 298
Score = 34.8 bits (78), Expect = 0.43
Identities = 18/46 (39%), Positives = 22/46 (47%)
Query: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGE 79
YNIG G T A++YY A+ NP A NN+ I R E
Sbjct: 43 YNIGKNLADQGNQTAAIKYYREAVRLNPKYVHAMNNLGNILKERNE 88
>gb|AAH02989.1|AAH02989 (BC002989) Unknown (protein for IMAGE:2821268) [Homo sapiens]
Length = 329
Score = 34.4 bits (77), Expect = 0.56
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 7 GNYAEALQNYYEAMRLEVDP-YDRSYILYNIGLIHTSNGEHTKALEYYFRALERNP 61
GNYA A+Q+ A+ +DP Y ++Y +GL +S +H +A+ YY +ALE +P
Sbjct: 155 GNYAGAVQDCERAIC--IDPAYSKAY--GRMGLALSSLNKHVEAVAYYKKALELDP 206
>gi|12741709 small glutamine-rich tetratricopeptide repeat (TPR)-containing
[Homo sapiens]
Length = 323
Score = 34.4 bits (77), Expect = 0.56
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 7 GNYAEALQNYYEAMRLEVDP-YDRSYILYNIGLIHTSNGEHTKALEYYFRALERNP 61
GNYA A+Q+ A+ +DP Y ++Y +GL +S +H +A+ YY +ALE +P
Sbjct: 149 GNYAGAVQDCERAIC--IDPAYSKAY--GRMGLALSSLNKHVEAVAYYKKALELDP 200
>dbj|BAB21885.1| (AB055261) hypothetical protein [Macaca fascicularis]
Length = 524
Score = 34.4 bits (77), Expect = 0.56
Identities = 18/46 (39%), Positives = 21/46 (45%)
Query: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGE 79
YNIG G T A+ YY A+ NP A NN+ I R E
Sbjct: 269 YNIGKNLADKGNQTAAIRYYREAVRLNPKYVHAMNNLGNILKERNE 314
>gb|AAF67841.1|AF198051_1 (AF198051) peroxisomal targeting signal-1 receptor [Leishmania
donovani]
Length = 625
Score = 34.4 bits (77), Expect = 0.56
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 17/99 (17%)
Query: 17 YEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHY 76
YEA +E++P D S + N+G++H E +A E + +A+ +P P+ +N +
Sbjct: 460 YEAA-IEMNPSD-SQLFTNLGVLHNVAHEFDEAAECFRKAVALHPDDPKMWNKLGATLAN 517
Query: 77 RGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEA 115
G DQA E + +A+ + PG Y+ A
Sbjct: 518 GGHP--------------DQALEAYNRALDINPG-YVRA 541
Score = 30.5 bits (67), Expect = 8.3
Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 14/62 (22%)
Query: 48 KALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIAL 107
+A Y A+E NP Q F N+ V+ + E FD+AAE +++A+AL
Sbjct: 455 EARTLYEAAIEMNPSDSQLFTNLGVLHNVAHE--------------FDEAAECFRKAVAL 500
Query: 108 TP 109
P
Sbjct: 501 HP 502
>pir||T08782 hypothetical protein DKFZp586N1020.1 - human (fragment)
Length = 349
Score = 34.4 bits (77), Expect = 0.56
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 7 GNYAEALQNYYEAMRLEVDP-YDRSYILYNIGLIHTSNGEHTKALEYYFRALERNP 61
GNYA A+Q+ A+ +DP Y ++Y +GL +S +H +A+ YY +ALE +P
Sbjct: 175 GNYAGAVQDCERAIC--IDPAYSKAY--GRMGLALSSLNKHVEAVAYYKKALELDP 226
>pir||B72338 galactosyltransferase-related protein - Thermotoga maritima
(strain MSB8)
gb|AAD35838.1|AE001745_5 (AE001745) galactosyltransferase-related protein [Thermotoga
maritima]
Length = 1044
Score = 34.4 bits (77), Expect = 0.56
Identities = 19/62 (30%), Positives = 35/62 (55%), Gaps = 6/62 (9%)
Query: 18 EAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYR 77
E + EV+ Y+ ++G+IH G+ ++ALE++ +AL+ NP A N + + +
Sbjct: 24 EKIEDEVEKYN------SLGIIHYYEGKVSEALEFFKKALDINPVHDDALFNYSKVLFEK 77
Query: 78 GE 79
GE
Sbjct: 78 GE 79
>pir||B70374 conserved hypothetical protein aq_854 - Aquifex aeolicus
gb|AAC06984.1| (AE000710) hypothetical protein [Aquifex aeolicus]
Length = 545
Score = 34.4 bits (77), Expect = 0.56
Identities = 27/107 (25%), Positives = 46/107 (42%), Gaps = 17/107 (15%)
Query: 5 SEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLP 64
++G EA + E M E DP D Y +G I+ + G+ K +EY+ +ALE+ +
Sbjct: 129 NKGKLREAEKVLLEYM--ETDP-DNPLPYYLLGRIYLAKGDIQKGMEYFLKALEKKKYYA 185
Query: 65 QAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGN 111
A + G+ + E F +A E +K + P +
Sbjct: 186 PA--------------VLSLGNLYLQEKKFKEAEELYKSVLEKYPNS 218
>gi|4506921 small glutamine-rich tetratricopeptide repeat (TPR)-containing
[Homo sapiens]
sp|O43765|SGT_HUMAN SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN
emb|CAA11565.1| (AJ223828) small glutamine-rich tetratricopeptide (SGT) [Homo
sapiens]
gb|AAD13117.1| (AC006538) small glutamine-rich tetratricopeptide (SGT) [Homo
sapiens]
emb|CAB39725.1| (AJ133129) small glutamine-rich tetratricopeptide repeat containing
protein [Homo sapiens]
emb|CAB43297.2| (AL050156) hypothetical protein [Homo sapiens]
gb|AAH00390.1|AAH00390 (BC000390) small glutamine-rich tetratricopeptide repeat
(TPR)-containing [Homo sapiens]
Length = 313
Score = 34.4 bits (77), Expect = 0.56
Identities = 22/56 (39%), Positives = 35/56 (62%), Gaps = 5/56 (8%)
Query: 7 GNYAEALQNYYEAMRLEVDP-YDRSYILYNIGLIHTSNGEHTKALEYYFRALERNP 61
GNYA A+Q+ A+ +DP Y ++Y +GL +S +H +A+ YY +ALE +P
Sbjct: 139 GNYAGAVQDCERAIC--IDPAYSKAY--GRMGLALSSLNKHVEAVAYYKKALELDP 190
>sp|Q58823|YE28_METJA HYPOTHETICAL PROTEIN MJ1428
pir||C64478 hypothetical protein MJ1428 - Methanococcus jannaschii
gb|AAB99438.1| (U67584) O-linked GlnNAc transferase [Methanococcus jannaschii]
Length = 567
Score = 34.4 bits (77), Expect = 0.56
Identities = 21/105 (20%), Positives = 50/105 (47%), Gaps = 14/105 (13%)
Query: 9 YAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGE-------HTKALEYYFRALERNP 61
Y + +E + ++ D+S ++N L + G+ A+E Y +A++ N
Sbjct: 240 YKSVIAEIFEEYKKALEYIDKSISIFNRSLYYAKKGDILYKLGDEEGAIEAYNKAIKLNS 299
Query: 62 FLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIA 106
P A+ +A++ + R+G+ E + ++FD+ E + + ++
Sbjct: 300 QNPYAYFGLAILYY-------RKGELEKSSNFFDKVLETYLEELS 337
>pir||T16298 hypothetical protein F38B6.6 - Caenorhabditis elegans
gb|AAA81143.1| (U40060) weakly similar to E. nidulans bimA gene product
(SP:P17885) [Caenorhabditis elegans]
Length = 603
Score = 34.4 bits (77), Expect = 0.56
Identities = 22/66 (33%), Positives = 33/66 (49%), Gaps = 7/66 (10%)
Query: 32 ILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAE 91
I YN+G + NG A + Y+ A++ +P QA NN+ G + GDS+ AE
Sbjct: 347 IHYNLGKVLGDNGLTKDAEKNYWNAIKLDPSYEQALNNL-------GNLLEKSGDSKTAE 399
Query: 92 SWFDQA 97
S +A
Sbjct: 400 SLLARA 405
>pir||E69688 response regulator aspartate phosphatase rapB - Bacillus subtilis
emb|CAB03684.1| (Z81356) aspartyl-phosphate phosphatases [Bacillus subtilis]
emb|CAB15686.1| (Z99122) response regulator aspartate phosphatase [Bacillus
subtilis]
Length = 377
Score = 34.0 bits (76), Expect = 0.73
Identities = 39/134 (29%), Positives = 60/134 (44%), Gaps = 21/134 (15%)
Query: 8 NYAEALQNYYEAMRL---EVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALE-----R 59
NY +AL++ +A RL E P LYNIG + GE +A EY+ +AL +
Sbjct: 196 NYEKALEHLDDAYRLALLEGQPRLIGSALYNIGNCYDDKGELDQAAEYFEKALPVFEDYQ 255
Query: 60 NPFLPQAFNNMAVICHYR--GEQAIRQGDSEIA-----ESWFDQAAEYWKQAIALTPGNY 112
LP+A ++ + + E AIR + IA +F A + QA+ Y
Sbjct: 256 LEQLPKALFSLTRVLFKKQDSEAAIRYYEKGIAIAQKRNDFFSLAKYKFLQAL------Y 309
Query: 113 IEAQNWLKITRRFE 126
+E+ N I F+
Sbjct: 310 VESVNLNMIQEVFD 323
>gi|12083667 small glutamine-rich tetratricopeptide repeat (TPR) containing
protein (SGT) [Rattus norvegicus]
sp|O70593|SGT_RAT SMALL GLUTAMINE-RICH TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN
emb|CAA10960.1| (AJ222724) SGT protein [Rattus norvegicus]
Length = 314
Score = 33.6 bits (75), Expect = 0.96
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 5/56 (8%)
Query: 7 GNYAEALQNYYEAMRLEVDP-YDRSYILYNIGLIHTSNGEHTKALEYYFRALERNP 61
GNY A+Q+ A + +DP Y ++Y +GL +S +H +A+ YY +ALE +P
Sbjct: 139 GNYVGAVQDCERA--IGIDPGYSKAY--GRMGLALSSLNKHAEAVAYYKKALELDP 190
>pir||B70402 hypothetical protein aq_1185 - Aquifex aeolicus
gb|AAC07204.1| (AE000727) putative protein [Aquifex aeolicus]
Length = 595
Score = 33.6 bits (75), Expect = 0.96
Identities = 27/100 (27%), Positives = 43/100 (43%), Gaps = 9/100 (9%)
Query: 15 NYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL--PQAFNNMAV 72
NY + ++ + Y+ Y L +G+ T G + KAL Y +A NPFL FN
Sbjct: 166 NYIKNLKNIPEEYEYLYYL-TLGIYETDFGHYEKALNYLNKAFSLNPFLKFDVHFN---- 220
Query: 73 ICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNY 112
+Y G + G+ + +F + E + T NY
Sbjct: 221 --YYAGVSLFKNGEIRKSLLYFIRTRELDRFRFYTTMTNY 258
>gb|AAB87735.1| (U78597) kinesin light chain [Plectonema boryanum]
Length = 490
Score = 33.6 bits (75), Expect = 0.96
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 13/88 (14%)
Query: 4 QSEGNYAEALQNYYEAM-----RLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRAL- 57
+S+G Y EA Y ++ +L D D + L N+ +++ S G H KA RAL
Sbjct: 251 RSQGRYEEAEPLYVRSLSIREQQLGTDHLDVATSLSNLAVLYQSQGCHHKAEPLLVRALP 310
Query: 58 -------ERNPFLPQAFNNMAVICHYRG 78
+P + + NN+A + H +G
Sbjct: 311 IWEQQLGTDHPDVATSLNNLAFLYHLQG 338
>sp|P17885|BIMA_EMENI BIMA PROTEIN
pir||A53256 nuclear protein bimA - Emericella nidulans
emb|CAA41959.1| (X59269) bimA [Emericella nidulans]
Length = 806
Score = 33.6 bits (75), Expect = 0.96
Identities = 17/43 (39%), Positives = 26/43 (59%)
Query: 28 DRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNM 70
D + +L G + ++ EH KA+E Y AL+ NPF+ AF N+
Sbjct: 125 DAAAVLCLQGKLWQAHKEHNKAVECYAAALKLNPFMWDAFLNL 167
>dbj|BAB22218.1| (AK002597) putative [Mus musculus]
Length = 505
Score = 33.2 bits (74), Expect = 1.3
Identities = 24/103 (23%), Positives = 46/103 (44%), Gaps = 17/103 (16%)
Query: 6 EGNYAEALQNYYEAMRLEVDPYDRSYI--LYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
E N + + YY+ EV D +++ + IG H + + AL +Y R L+ +
Sbjct: 294 EMNNSSSAAEYYK----EVLKQDNTHVEAIACIGSNHFYSDQPEVALRFYRRLLQMGVYN 349
Query: 64 PQAFNNMAVICHYRGEQ-----------AIRQGDSEIAESWFD 95
Q FNN+ + C Y + ++ + + E A+ W++
Sbjct: 350 CQLFNNLGLCCFYAQQYDMTLTSFERALSLAENEEEAADVWYN 392
Score = 33.2 bits (74), Expect = 1.3
Identities = 23/91 (25%), Positives = 43/91 (46%), Gaps = 4/91 (4%)
Query: 9 YAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFN 68
Y L ++ A+ L + + + + YN+G I G+ A + + AL N +A+N
Sbjct: 366 YDMTLTSFERALSLAENEEEAADVWYNLGHIAVGIGDTNLAHQCFRLALVHNNHHAEAYN 425
Query: 69 NMAVI----CHYRGEQAIRQGDSEIAESWFD 95
N+AV+ H +A+ Q S +A ++
Sbjct: 426 NLAVLEMRKGHVEQARALLQTASSLAPHMYE 456
>pir||C83262 hypothetical protein PA3074 [imported] - Pseudomonas aeruginosa
(strain PAO1)
gb|AAG06462.1|AE004731_10 (AE004731) hypothetical protein [Pseudomonas aeruginosa]
Length = 586
Score = 33.2 bits (74), Expect = 1.3
Identities = 29/109 (26%), Positives = 48/109 (43%), Gaps = 13/109 (11%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
+S +YA A Q + + D++ YN G GE A++ Y +ALER
Sbjct: 388 LSLYQARDYAAAAQAFAQG--------DQADDHYNRGNALARQGELEAAVDAYEQALERQ 439
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTP 109
P L A N A++ E+ +RQ + A+ + E ++A +P
Sbjct: 440 PQLVAAQRNKALV-----EELLRQRQEQAAQQQAGENKEQRQEASQQSP 483
>gi|4505499 O-linked GlcNAc transferase; O-GlcNAc transferase (uridine
diphospho-N-acetylglucosamine:polypeptide
beta-N-acetylglucosaminyl transferase); uridine
diphospho-N-acetylglucosamine:polypeptide
beta-N-acetylglucosaminyl transferase [Homo sapiens]
ref|XP_010136.1| O-linked GlcNAc transferase [Homo sapiens]
sp|O15294|OGT1_HUMAN UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE
100 KDA SUBUNIT (O-GLCNAC TRANSFERASE P100 SUBUNIT)
gb|AAB63466.1| (U77413) O-linked GlcNAc transferase [Homo sapiens]
gb|AAF31458.1| (AF223393) HRNT1 [Homo sapiens]
Length = 920
Score = 33.2 bits (74), Expect = 1.3
Identities = 28/106 (26%), Positives = 47/106 (43%), Gaps = 17/106 (16%)
Query: 4 QSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
+ +G+ AEA Y A+RL D L N+ I G +A+ Y +ALE P
Sbjct: 178 KEKGSVAEAEDCYNTALRLCPTHADS---LNNLANIKREQGNIEEAVRLYRKALEVFPEF 234
Query: 64 PQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTP 109
A +N+A + +G+ +A ++K+AI ++P
Sbjct: 235 AAAHSNLASVLQQQGK--------------LQEALMHYKEAIRISP 266
>sp|P56558|OGT1_RAT UDP-N-ACETYLGLUCOSAMINE--PEPTIDE N-ACETYLGLUCOSAMINYLTRANSFERASE
110 KDA SUBUNIT (O-GLCNAC TRANSFERASE P110 SUBUNIT)
pir||T31673 N-acetylglucosaminyltransferases (EC 2.4.1.-), chain p110 - rat
gb|AAC53121.1| (U76557) O-GlcNAc transferase, p110 subunit [Rattus norvegicus]
Length = 1036
Score = 33.2 bits (74), Expect = 1.3
Identities = 28/106 (26%), Positives = 47/106 (43%), Gaps = 17/106 (16%)
Query: 4 QSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
+ +G+ AEA Y A+RL D L N+ I G +A+ Y +ALE P
Sbjct: 294 KEKGSVAEAEDCYNTALRLCPTHADS---LNNLANIKREQGNIEEAVRLYRKALEVFPEF 350
Query: 64 PQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTP 109
A +N+A + +G+ +A ++K+AI ++P
Sbjct: 351 AAAHSNLASVLQQQGK--------------LQEALMHYKEAIRISP 382
Score = 32.5 bits (72), Expect = 2.2
Identities = 30/123 (24%), Positives = 54/123 (43%), Gaps = 20/123 (16%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
G+ A+Q Y A++ D Y + ++G + + G +A Y +A+E P A
Sbjct: 127 GDMEGAVQAYVSALQYNPDLY---CVRSDLGNLLKALGRLEEAKACYLKAIETQPNFAVA 183
Query: 67 FNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPG---NYIEAQNWLKITR 123
++N+ + + +G E W A ++++A+ L P YI N LK R
Sbjct: 184 WSNLGCVFNAQG------------EIWL--AIHHFEKAVTLDPNFLDAYINLGNVLKEAR 229
Query: 124 RFE 126
F+
Sbjct: 230 IFD 232
Score = 30.9 bits (68), Expect = 6.3
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 4 QSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
+ G EA+++Y A+RL+ D D YI N+ + G+ A++ Y AL+ NP L
Sbjct: 90 KERGQLQEAIEHYRHALRLKPDFID-GYI--NLAAALVAAGDMEGAVQAYVSALQYNPDL 146
>pir||S76685 hypothetical protein - Synechocystis sp. (strain PCC 6803)
dbj|BAA10629.1| (D64004) hypothetical protein [Synechocystis sp.]
Length = 398
Score = 33.2 bits (74), Expect = 1.3
Identities = 18/69 (26%), Positives = 36/69 (52%), Gaps = 3/69 (4%)
Query: 4 QSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
Q G EA++ Y + +DP ++ +N+ +I+ + G +A++ Y A+ P
Sbjct: 290 QDLGELGEAIKLYQAV--IHIDP-SQAIAFFNLAMIYKAQGNLLEAIKGYQEAITLQPDY 346
Query: 64 PQAFNNMAV 72
+A+ N+AV
Sbjct: 347 AEAYQNLAV 355
>dbj|BAB29319.1| (AK014393) putative [Mus musculus]
Length = 582
Score = 32.8 bits (73), Expect = 1.6
Identities = 21/83 (25%), Positives = 41/83 (49%), Gaps = 22/83 (26%)
Query: 33 LYNIGLIHTSNGEHTKALEYYFRALE--------RNPFLPQAFNNMAVICHYRGEQAIRQ 84
L N+ ++H+ +H++AL Y RAL+ +P + + N+AV+ + G
Sbjct: 463 LVNLAVLHSQMKKHSEALPLYERALKIYEDSLGRMHPRVGETLKNLAVLSYEEGN----- 517
Query: 85 GDSEIAESWFDQAAEYWKQAIAL 107
F++AAE +K+A+ +
Sbjct: 518 ---------FEKAAELYKRAMEI 531
>gb|AAH01978.1|AAH01978 (BC001978) Unknown (protein for IMAGE:3461487) [Homo sapiens]
Length = 450
Score = 32.8 bits (73), Expect = 1.6
Identities = 31/97 (31%), Positives = 47/97 (47%), Gaps = 10/97 (10%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPF 62
A+ +GN EA Q Y EA L V+P D I++++GL+ + G + A + A+ER
Sbjct: 347 AEVKGNLEEAKQLYKEA--LTVNP-DGVRIMHSLGLMLSRLGHKSLAQKVLRDAVERQST 403
Query: 63 LPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAE 99
+A+ + GE QG +E A F A E
Sbjct: 404 CHEAWQGL-------GEVLQAQGQNEAAVDCFLTALE 433
>dbj|BAB11256.1| (AB009049) peroxisomal targeting signal type 1 receptor
[Arabidopsis thaliana]
Length = 728
Score = 32.8 bits (73), Expect = 1.6
Identities = 17/52 (32%), Positives = 33/52 (62%), Gaps = 3/52 (5%)
Query: 10 AEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNP 61
A+A+ Y +A+ L+ + Y R++ N+G+ + + G + +++ YY RAL NP
Sbjct: 641 ADAISAYQQALDLKPN-YVRAWA--NMGISYANQGMYKESIPYYVRALAMNP 689
>dbj|BAA86454.1| (AB032966) KIAA1140 protein [Homo sapiens]
Length = 708
Score = 32.8 bits (73), Expect = 1.6
Identities = 31/97 (31%), Positives = 47/97 (47%), Gaps = 10/97 (10%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPF 62
A+ +GN EA Q Y EA L V+P D I++++GL+ + G + A + A+ER
Sbjct: 605 AEVKGNLEEAKQLYKEA--LTVNP-DGVRIMHSLGLMLSRLGHKSLAQKVLRDAVERQST 661
Query: 63 LPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAE 99
+A+ + GE QG +E A F A E
Sbjct: 662 CHEAWQGL-------GEVLQAQGQNEAAVDCFLTALE 691
>pir||T51817 peroxisomal targeting signal type 1 receptor [imported] -
Arabidopsis thaliana
gb|AAC62012.1| (AF074843) peroxisomal targeting signal type 1 receptor
[Arabidopsis thaliana]
Length = 728
Score = 32.8 bits (73), Expect = 1.6
Identities = 17/52 (32%), Positives = 33/52 (62%), Gaps = 3/52 (5%)
Query: 10 AEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNP 61
A+A+ Y +A+ L+ + Y R++ N+G+ + + G + +++ YY RAL NP
Sbjct: 641 ADAISAYQQALDLKPN-YVRAWA--NMGISYANQGMYKESIPYYVRALAMNP 689
>gb|AAB93327.1| (U88165) F54C1.5 gene product [Caenorhabditis elegans]
Length = 418
Score = 32.8 bits (73), Expect = 1.6
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 3/54 (5%)
Query: 6 EGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALER 59
EGNY EAL+ + EA E Y +S + Y+I L H G++ AL+ + R
Sbjct: 132 EGNYEEALKKFNEA--TEFSGY-QSGLAYSIALCHYRRGDYDSALKLISEIINR 182
>sp|Q57992|Y572_METJA HYPOTHETICAL PROTEIN MJ0572
pir||D64371 hypothetical protein MJ0572 - Methanococcus jannaschii
gb|AAB98572.1| (U67506) M. jannaschii predicted coding region MJ0572
[Methanococcus jannaschii]
Length = 86
Score = 32.8 bits (73), Expect = 1.6
Identities = 17/45 (37%), Positives = 25/45 (54%)
Query: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRG 78
Y G+ + G+ KALEY+ +A+E NPF A+ N A+ G
Sbjct: 12 YKKGVEVGNKGDVEKALEYFNKAIELNPFYRDAWFNKALALRILG 56
>pir||B36972 aad 5'-region hypothetical protein - Clostridium acetobutylicum
(ATCC 824)
Length = 318
Score = 32.8 bits (73), Expect = 1.6
Identities = 20/81 (24%), Positives = 41/81 (49%), Gaps = 14/81 (17%)
Query: 33 LYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAES 92
+Y+ L + GE +AL+Y+ RA+E P + ++ N+A + G+
Sbjct: 102 VYSFALSYHILGEPERALKYFLRAVELQPNVGISYENLAWFYYLTGK------------- 148
Query: 93 WFDQAAEYWKQAIALTPGNYI 113
+D+A E +++AI++ N +
Sbjct: 149 -YDKAIENFEKAISMGSTNSV 168
>dbj|BAA06145.1| (D29674) DNA-binding protein [Lactobacillus sp.]
prf||2105286A transcriptional activator [Lactobacillus sp.]
Length = 424
Score = 32.8 bits (73), Expect = 1.6
Identities = 27/105 (25%), Positives = 49/105 (45%), Gaps = 11/105 (10%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYD-----RSYILYNIGLIHTSNGEHTKALEYYFR 55
+S + Y EAL+ YE++ EVD + ++ L N+G ++ EH K+ Y+ +
Sbjct: 237 LSYVEKAQYEEALK-IYESILREVDSFAEKDMIKAMTLNNMGELYHYKNEHDKSKSYFLQ 295
Query: 56 ALERNPFLPQAFN-NMAVICHYRGEQAIRQGDSEIAESWFDQAAE 99
+ + L Q N N + +Q+I E A+ W ++ E
Sbjct: 296 SFQ----LQQTVNMNYIETIYGLAKQSIHLKCYEEAQKWIEKGIE 336
>sp|P33746|SOLR_CLOAB SOL LOCUS TRANSCRIPTIONAL REPRESSOR
pir||S33433 hypothetical protein 5 - Clostridium acetobutylicum
emb|CAA51342.1| (X72831) ORF5 [Clostridium acetobutylicum]
gb|AAD04637.1| (L14817) transcriptional repressor [Clostridium acetobutylicum]
Length = 318
Score = 32.8 bits (73), Expect = 1.6
Identities = 20/81 (24%), Positives = 41/81 (49%), Gaps = 14/81 (17%)
Query: 33 LYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAES 92
+Y+ L + GE +AL+Y+ RA+E P + ++ N+A + G+
Sbjct: 102 VYSFALSYHILGEPERALKYFLRAVELQPNVGISYENLAWFYYLTGK------------- 148
Query: 93 WFDQAAEYWKQAIALTPGNYI 113
+D+A E +++AI++ N +
Sbjct: 149 -YDKAIENFEKAISMGSTNSV 168
>pir||H83171 type 4 fimbrial biogenesis protein PilF PA3805 [imported] -
Pseudomonas aeruginosa (strain PAO1)
gb|AAG07192.1|AE004798_15 (AE004798) type 4 fimbrial biogenesis protein PilF [Pseudomonas
aeruginosa]
Length = 252
Score = 32.5 bits (72), Expect = 2.2
Identities = 33/123 (26%), Positives = 48/123 (38%), Gaps = 21/123 (17%)
Query: 9 YAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFN 68
Y EA Q EA + + P +RS + N+GL+ + +A EY+ ++L N P
Sbjct: 121 YEEAYQRLLEASQDTLYP-ERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVAL 179
Query: 69 NMAVICHYRGE--------QAIRQGDSEIAESWF------------DQAAEYWKQAIALT 108
MA + + E QG + A S D AA Y Q L
Sbjct: 180 EMADLLYKEREYVPARQYYDLFAQGGGQNARSLLLGIRLAKVFEDRDTAASYGLQLKRLY 239
Query: 109 PGN 111
PG+
Sbjct: 240 PGS 242
>pir||T48150 stress-induced protein sti1-like protein - Arabidopsis thaliana
emb|CAB45987.1| (AL080318) stress-induced protein sti1-like protein [Arabidopsis
thaliana]
emb|CAB78283.1| (AL161534) stress-induced protein sti1-like protein [Arabidopsis
thaliana]
Length = 558
Score = 32.5 bits (72), Expect = 2.2
Identities = 28/111 (25%), Positives = 51/111 (45%), Gaps = 19/111 (17%)
Query: 2 SAQSEGNYAEALQNYYEAMRLEVDPYDRSYILY-NIGLIHTSNGEHTKALEYYFRALERN 60
+A S G+YA A+ ++ EA+ L ++ILY N + S + +AL + +E
Sbjct: 11 AAFSSGDYATAITHFTEAINLS----PTNHILYSNRSASYASLHRYEEALSDAKKTIELK 66
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGN 111
P + ++ R G + I S FD+A + +K+ + + P N
Sbjct: 67 PDWSKGYS--------------RLGAAFIGLSKFDEAVDSYKKGLEIDPSN 103
>gb|AAC69177.1| (AF053104) peroxisomal targeting signal 1 receptor; PTS1 receptor;
Pex5p [Nicotiana tabacum]
Length = 741
Score = 32.5 bits (72), Expect = 2.2
Identities = 18/63 (28%), Positives = 36/63 (56%), Gaps = 3/63 (4%)
Query: 10 AEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNN 69
A+A+ Y +A+ L+ + Y R++ N+G+ + + G + ++ YY RAL NP A+
Sbjct: 654 ADAILAYQQALDLKPN-YVRAWA--NMGISYANQGMYEDSIRYYVRALAMNPKADNAWQY 710
Query: 70 MAV 72
+ +
Sbjct: 711 LRI 713
>gb|AAC69181.1| (AF056283) peroxisomal targeting sequence 1 receptor [Nicotiana
tabacum]
Length = 332
Score = 32.5 bits (72), Expect = 2.2
Identities = 18/63 (28%), Positives = 36/63 (56%), Gaps = 3/63 (4%)
Query: 10 AEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNN 69
A+A+ Y +A+ L+ + Y R++ N+G+ + + G + ++ YY RAL NP A+
Sbjct: 245 ADAILAYQQALDLKPN-YVRAWA--NMGISYANQGMYEDSIRYYVRALAMNPKADNAWQY 301
Query: 70 MAV 72
+ +
Sbjct: 302 LRI 304
>gb|AAC69180.1| (AF056282) peroxisomal targeting sequence 1 receptor [Nicotiana
tabacum]
Length = 552
Score = 32.5 bits (72), Expect = 2.2
Identities = 18/63 (28%), Positives = 36/63 (56%), Gaps = 3/63 (4%)
Query: 10 AEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNN 69
A+A+ Y +A+ L+ + Y R++ N+G+ + + G + ++ YY RAL NP A+
Sbjct: 465 ADAILAYQQALDLKPN-YVRAWA--NMGISYANQGMYEDSIRYYVRALAMNPKADNAWQY 521
Query: 70 MAV 72
+ +
Sbjct: 522 LRI 524
>gb|AAC97489.1| (AF068690) peroxisomal targeting signal-1 receptor [Citrullus
lanatus]
Length = 647
Score = 32.5 bits (72), Expect = 2.2
Identities = 17/63 (26%), Positives = 38/63 (59%), Gaps = 3/63 (4%)
Query: 10 AEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNN 69
A+A+ Y +A+ L+ + Y R++ N+G+ + + G + ++++YY R+L NP A+
Sbjct: 560 ADAILAYQQALDLKPN-YVRAWA--NMGISYANQGLYEESIKYYVRSLSMNPKADNAWQY 616
Query: 70 MAV 72
+ +
Sbjct: 617 LRI 619
>gi|12736135 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein)
[Homo sapiens]
Length = 362
Score = 32.1 bits (71), Expect = 2.8
Identities = 26/84 (30%), Positives = 44/84 (51%), Gaps = 7/84 (8%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILY-NIGLIHTSNGEHTKALEYYFRALERNP 61
A S GN +ALQ Y EA++L DP+ +++LY N + G++ KA E + ++ P
Sbjct: 34 ALSVGNIDDALQCYSEAIKL--DPH--NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP 89
Query: 62 FLPQAFNNMAVICHY--RGEQAIR 83
+ ++ A + R E+A R
Sbjct: 90 DWGKGYSRKAAALEFLNRFEEAKR 113
>gb|AAK00601.1|AF220563_1 (AF220563) transcriptional activator NprR [Bacillus thuringiensis
subsp. finitimus]
Length = 425
Score = 32.1 bits (71), Expect = 2.8
Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 15/104 (14%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSYI----LYNIGLIHTSNGEHTKALEYYFRA 56
+S +G Y EAL+ Y +R D+ + L NIG I+ ++ +A +YY +
Sbjct: 237 LSYAEQGQYEEALEMYESILRESEAFADKDVLKAITLSNIGNIYYKKKKYNQAKDYYLES 296
Query: 57 LERNPFLP----QAFNNMAVICHYRGEQAIRQGDSEIAESWFDQ 96
L+ + MA+ C I+ E A W D+
Sbjct: 297 LQLQKQIDLNYIDTLYEMALAC-------IKLDQFEEAREWIDK 333
>pdb|1ELW|A Chain A, Crystal Structure Of The Tpr1-Domain Of Hop In Complex
With A Hsc70-Peptide
pdb|1ELW|B Chain B, Crystal Structure Of The Tpr1-Domain Of Hop In Complex
With A Hsc70-Peptide
Length = 118
Score = 32.1 bits (71), Expect = 2.8
Identities = 26/84 (30%), Positives = 44/84 (51%), Gaps = 7/84 (8%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILY-NIGLIHTSNGEHTKALEYYFRALERNP 61
A S GN +ALQ Y EA++L DP+ +++LY N + G++ KA E + ++ P
Sbjct: 14 ALSVGNIDDALQCYSEAIKL--DPH--NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP 69
Query: 62 FLPQAFNNMAVICHY--RGEQAIR 83
+ ++ A + R E+A R
Sbjct: 70 DWGKGYSRKAAALEFLNRFEEAKR 93
>gb|AAB94760.1| (AF039202) Hsp70/Hsp90 organizing protein; hop [Cricetulus
griseus]
Length = 543
Score = 32.1 bits (71), Expect = 2.8
Identities = 26/84 (30%), Positives = 44/84 (51%), Gaps = 7/84 (8%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILY-NIGLIHTSNGEHTKALEYYFRALERNP 61
A S GN +ALQ Y EA++L DP ++++LY N + G++ KA E + ++ P
Sbjct: 14 ALSAGNIDDALQCYSEAIKL--DP--QNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP 69
Query: 62 FLPQAFNNMAVICHY--RGEQAIR 83
+ ++ A + R E+A R
Sbjct: 70 DWGKGYSRKAAALEFLNRFEEAKR 93
>emb|CAA75351.1| (Y15068) p60 protein [Rattus norvegicus]
Length = 543
Score = 32.1 bits (71), Expect = 2.8
Identities = 26/84 (30%), Positives = 44/84 (51%), Gaps = 7/84 (8%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILY-NIGLIHTSNGEHTKALEYYFRALERNP 61
A S GN +ALQ Y EA++L DP ++++LY N + G++ KA E + ++ P
Sbjct: 14 ALSAGNIDDALQCYSEAIKL--DP--QNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP 69
Query: 62 FLPQAFNNMAVICHY--RGEQAIR 83
+ ++ A + R E+A R
Sbjct: 70 DWGKGYSRKAAALEFLNRFEEAKR 93
>gb|AAC53267.1| (U27830) extendin [Mus musculus]
Length = 543
Score = 32.1 bits (71), Expect = 2.8
Identities = 26/84 (30%), Positives = 44/84 (51%), Gaps = 7/84 (8%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILY-NIGLIHTSNGEHTKALEYYFRALERNP 61
A S GN +ALQ Y EA++L DP ++++LY N + G++ KA E + ++ P
Sbjct: 14 ALSAGNIDDALQCYSEAIKL--DP--QNHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP 69
Query: 62 FLPQAFNNMAVICHY--RGEQAIR 83
+ ++ A + R E+A R
Sbjct: 70 DWGKGYSRKAAALEFLNRFEEAKR 93
>gi|5729800 Tg737 protein; Probe hTg737 (polycystic kidney disease, autosomal
recessive, in mouse TG737, human homolog of) [Homo
sapiens]
gb|AAA86720.1| (U20362) mutations in the mouse Tg737 gene cause polycystic kidney
disease [Homo sapiens]
Length = 824
Score = 32.1 bits (71), Expect = 2.8
Identities = 24/98 (24%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 32 ILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAE 91
+LY I I+ ++A+E+ + + P PQ + + GE R+GD A
Sbjct: 554 VLYQIANIYELMENPSQAIEWLMQVVSVIPTDPQVLSKL-------GELYDREGDKSQAF 606
Query: 92 SWFDQAAEYWK---QAIALTPGNYIEAQNWLKITRRFE 126
++ ++ Y+ + I YI+ Q W K + FE
Sbjct: 607 QYYYESYRYFPCNIEVIEWLGAYYIDTQFWEKAIQYFE 644
>gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing protein);
transformation-sensitive, similar to Saccharomyces
cerevisiae STI1 [Homo sapiens]
sp|P31948|IEFS_HUMAN TRANSFORMATION-SENSITIVE PROTEIN IEF SSP 3521
pir||A38093 transformation-sensitive protein IEF SSP 3521 - human
gb|AAA58682.1| (M86752) transformation-sensitive protein [Homo sapiens]
gb|AAH02987.1|AAH02987 (BC002987) stress-induced-phosphoprotein 1
(Hsp70/Hsp90-organizing protein) [Homo sapiens]
Length = 543
Score = 32.1 bits (71), Expect = 2.8
Identities = 26/84 (30%), Positives = 44/84 (51%), Gaps = 7/84 (8%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILY-NIGLIHTSNGEHTKALEYYFRALERNP 61
A S GN +ALQ Y EA++L DP+ +++LY N + G++ KA E + ++ P
Sbjct: 14 ALSVGNIDDALQCYSEAIKL--DPH--NHVLYSNRSAAYAKKGDYQKAYEDGCKTVDLKP 69
Query: 62 FLPQAFNNMAVICHY--RGEQAIR 83
+ ++ A + R E+A R
Sbjct: 70 DWGKGYSRKAAALEFLNRFEEAKR 93
>emb|CAC22693.1| (AL389894) hypothetical protein L779.03 [Leishmania major]
Length = 361
Score = 31.7 bits (70), Expect = 3.7
Identities = 24/82 (29%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 5 SEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLP 64
SE A+AL A++L D ++L +G +H ++G + KA E Y +AL+R P
Sbjct: 161 SEAVLAQALTAAELAVQLGWDRDHCGWLL--VGDVHAASGNYEKAKEAYGKALQRCPHYA 218
Query: 65 QAFNNMAVICHYRGEQAIRQGD 86
+A + +Q +R D
Sbjct: 219 KALERQIGVV----QQLVRAAD 236
>gb|AAF73524.1| (AE002273) type III secretion chaperone, putative [Chlamydia
muridarum]
Length = 335
Score = 31.7 bits (70), Expect = 3.7
Identities = 30/126 (23%), Positives = 57/126 (44%), Gaps = 10/126 (7%)
Query: 3 AQSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPF 62
A + + E +Y+A E+ P D L+++G + + A+ + R + +P+
Sbjct: 86 ALDKADRVEEAIGHYQAYA-ELHPEDIE-CLFSLGSAYHRVLRYEDAIACFDRIAQLDPW 143
Query: 63 LPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQN--WLK 120
PQ+ N AVI + +G ++ ES + YWK + L Y+ ++N W +
Sbjct: 144 NPQSLYNKAVIL---SDMEDEEGAIDLLESTVKRNPLYWKAWVKL---GYLLSRNKMWDR 197
Query: 121 ITRRFE 126
T +E
Sbjct: 198 ATEAYE 203
>gb|AAF50412.1| (AE003555) CG6915 gene product [Drosophila melanogaster]
Length = 2444
Score = 31.7 bits (70), Expect = 3.7
Identities = 27/106 (25%), Positives = 50/106 (46%), Gaps = 14/106 (13%)
Query: 4 QSEGNYAEALQNYYEAMRLEVD---PYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
Q G +A+AL+ + + + + + P ++ L N+G +H S G+ +AL+ Y R LE +
Sbjct: 936 QRMGQHAQALELHRQDLEICTELSAPALQARALSNLGSVHESLGQQAEALKCYERQLELS 995
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIA 106
+ MA + R + Q +QA +Y +Q +A
Sbjct: 996 --TDRLAKAMACLALGRVHHQLEQ---------HNQAVDYLRQGLA 1030
>pir||T36877 probable regulatory protein - Streptomyces coelicolor
emb|CAB52838.1| (AL109848) putative regulatory protein [Streptomyces coelicolor
A3(2)]
Length = 682
Score = 31.7 bits (70), Expect = 3.7
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 3/54 (5%)
Query: 7 GNYAEALQNYYEAM---RLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRAL 57
G AEAL Y A+ R DPY L ++G H G++ +A +++ RAL
Sbjct: 489 GRTAEALVRYRAALDAGREAKDPYATGRALESVGGAHLELGDYDRAADWFGRAL 542
>pir||B70157 hypothetical protein BB0459 - Lyme disease spirochete
gb|AAC66837.1| (AE001151) B. burgdorferi predicted coding region BB0459 [Borrelia
burgdorferi]
Length = 436
Score = 31.7 bits (70), Expect = 3.7
Identities = 21/71 (29%), Positives = 37/71 (51%), Gaps = 6/71 (8%)
Query: 5 SEGNYAEALQNY--YEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPF 62
SE N+ L +Y E + ++ P++ YN+G+ + + E+ AL + +A E+
Sbjct: 63 SEYNFLVKLIDYGKIEKNKDDLGPFEN----YNLGVFYFNLKEYKLALSCFLKAKEQKSD 118
Query: 63 LPQAFNNMAVI 73
QA NN AV+
Sbjct: 119 FVQALNNSAVL 129
>sp|P14922|SSN6_YEAST GLUCOSE REPRESSION MEDIATOR PROTEIN
gb|AAA34545.1| (M23440) CYC8 protein [Saccharomyces cerevisiae]
gb|AAA35103.1| (M17826) SSN6 protein [Saccharomyces cerevisiae]
Length = 966
Score = 31.7 bits (70), Expect = 3.7
Identities = 23/111 (20%), Positives = 50/111 (44%), Gaps = 14/111 (12%)
Query: 17 YEAMRLEVDPYDRSYILY-NIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 75
Y+A + V+ R+ I + +IG+++ ++ AL+ Y RA+ NP++ + + ++ +
Sbjct: 316 YDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALDAYTRAIRLNPYISEVWYDLGTL-- 373
Query: 76 YRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITRRFE 126
E + A + +KQA L N + +T++ E
Sbjct: 374 -----------YETCNNQLSDALDAYKQAARLDVNNVHIRERLEALTKQLE 413
>gi|6319589 Transcription regulatory protein; Cyc8p [Saccharomyces cerevisiae]
pir||S25365 CYC8 protein - yeast (Saccharomyces cerevisiae)
emb|CAA46973.1| (X66247) nuclear phosphoprotein [Saccharomyces cerevisiae]
emb|CAA55615.1| (X78993) glucose repression mediator protein [Saccharomyces
cerevisiae]
emb|CAA85069.1| (Z35981) ORF YBR112c [Saccharomyces cerevisiae]
Length = 966
Score = 31.7 bits (70), Expect = 3.7
Identities = 23/111 (20%), Positives = 50/111 (44%), Gaps = 14/111 (12%)
Query: 17 YEAMRLEVDPYDRSYILY-NIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICH 75
Y+A + V+ R+ I + +IG+++ ++ AL+ Y RA+ NP++ + + ++ +
Sbjct: 316 YDAFQQAVNRDSRNPIFWCSIGVLYYQISQYRDALDAYTRAIRLNPYISEVWYDLGTL-- 373
Query: 76 YRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITRRFE 126
E + A + +KQA L N + +T++ E
Sbjct: 374 -----------YETCNNQLSDALDAYKQAARLDVNNVHIRERLEALTKQLE 413
>pir||C82296 conserved hypothetical protein VC0648 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF93814.1| (AE004151) conserved hypothetical protein [Vibrio cholerae]
Length = 303
Score = 31.3 bits (69), Expect = 4.8
Identities = 25/97 (25%), Positives = 39/97 (39%), Gaps = 14/97 (14%)
Query: 21 RLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQ 80
R +++P R+ +L+ G + S G A + ++L NP P FN + V GE
Sbjct: 57 RTDLEPEIRAKMLFERGNYYDSVGLRDLARLDFTQSLSINPAQPDVFNLLGVYYTEAGE- 115
Query: 81 AIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQN 117
FD A E + + L P N +N
Sbjct: 116 -------------FDAAYESFDSTLELDPSNEYAVRN 139
>gb|AAF58990.1| (AE003834) CG8777 gene product [Drosophila melanogaster]
Length = 1119
Score = 31.3 bits (69), Expect = 4.8
Identities = 19/77 (24%), Positives = 38/77 (48%), Gaps = 2/77 (2%)
Query: 8 NYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAF 67
NY++AL +A RL P+ Y L + G+ ++A + Y + + NP +A
Sbjct: 421 NYSDALNYVLKATRLR--PHFAECFDYLGKLYPLATGDFSRARKCYEKCISLNPLAEEAV 478
Query: 68 NNMAVICHYRGEQAIRQ 84
+ ++ I +GE+ + +
Sbjct: 479 DALSFIYQEQGEEELNE 495
>gb|AAC12945.1| (AF056198) Hsp70/Hsp90 organizing protein homolog [Drosophila
melanogaster]
Length = 489
Score = 31.3 bits (69), Expect = 4.8
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 37 GLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMA 71
G + NG+++ A+++Y A++RNP P+ ++N A
Sbjct: 316 GNLFFKNGDYSTAVKHYTEAIKRNPDDPKLYSNRA 350
>pir||S74665 outer membrane protein mom72, 72K - Synechocystis sp. (strain PCC
6803)
dbj|BAA16817.1| (D90900) mitochondrial outer membrane 72K protein [Synechocystis
sp.]
Length = 266
Score = 31.3 bits (69), Expect = 4.8
Identities = 27/99 (27%), Positives = 47/99 (47%), Gaps = 11/99 (11%)
Query: 2 SAQSE-GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERN 60
++QS+ GN A+ +Y +A+R+ + YN L H + +AL Y ++++ +
Sbjct: 152 NSQSQLGNETTAIADYNDAIRINAQ---HANAYYNRALTHNRLKQDQQALADYNQSIQLD 208
Query: 61 PFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAE 99
P +A+ N RG R GD A + +AAE
Sbjct: 209 PDSAEAYFN-------RGLTQYRLGDEPKAIADLTKAAE 240
>pir||JC5302 PilF protein - Pseudomonas aeruginosa
gb|AAB40949.1| (L49434) homologous to HI0366 in Haemophilus influenzae
[Pseudomonas aeruginosa]
Length = 198
Score = 31.3 bits (69), Expect = 4.8
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 9 YAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFN 68
Y EA Q EA + + P +RS + N+GL+ + +A EY+ ++L N P
Sbjct: 121 YEEAYQRLLEASQDTLYP-ERSRVFENLGLVSLQMKKPAQAKEYFEKSLRLNRNQPSVAL 179
Query: 69 NMAVICHYRGE 79
MA + + E
Sbjct: 180 EMADLLYKERE 190
>pir||S75709 hypothetical protein sll0886 - Synechocystis sp. (strain PCC 6803)
dbj|BAA10444.1| (D64003) hypothetical protein [Synechocystis sp.]
Length = 279
Score = 31.3 bits (69), Expect = 4.8
Identities = 33/118 (27%), Positives = 51/118 (42%), Gaps = 24/118 (20%)
Query: 2 SAQSEGNYAEALQNYYEAMRL---EVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALE 58
S S+ EA+ ++ +A+ L + DPY N G + GE A+ Y R L
Sbjct: 92 SRVSQNKLDEAIADFNQAIELAPEQTDPY------LNRGTALEAKGEFKAAIADYNRVLA 145
Query: 59 RNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQ 116
NP A+NN +G++E + A E ++QA A+ P N+ AQ
Sbjct: 146 VNPEDAFAYNN--------------RGNAEGGLGNWTSALEDFQQATAIAP-NFAFAQ 188
>sp|P39833|NLPI_ECOLI LIPOPROTEIN NLPI PRECURSOR
pir||G65106 hypothetical 33.6 kD protein in dead-pnp intergenic region -
Escherichia coli (strain K-12)
gb|AAA57966.1| (U18997) ORF_f294 [Escherichia coli]
gb|AAC76197.1| (AE000397) putative control proteins [Escherichia coli K12]
gb|AAG58299.1|AE005545_1 (AE005545) putative control proteins [Escherichia coli O157:H7]
Length = 294
Score = 31.3 bits (69), Expect = 4.8
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 7/72 (9%)
Query: 28 DRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDS 87
+R+ +LY G+++ S G A + +AL P +P+ FN Y G + G+
Sbjct: 60 ERAQLLYERGVLYDSLGLRALARNDFSQALAIRPDMPEVFN-------YLGIYLTQAGNF 112
Query: 88 EIAESWFDQAAE 99
+ A FD E
Sbjct: 113 DAAYEAFDSVLE 124
>dbj|BAB30914.1| (AK017763) putative [Mus musculus]
Length = 332
Score = 30.9 bits (68), Expect = 6.3
Identities = 26/101 (25%), Positives = 46/101 (44%), Gaps = 10/101 (9%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
G + +A+ Y +A LE+D + ++ G ++ + G KA+E + ALE P
Sbjct: 214 GRHVDAMNEYNKA--LEIDKQNVEALVAR-GALYATKGSLNKAIEDFELALEN---CPTH 267
Query: 67 FNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIAL 107
N +C + + +G E F A Y+K+A+ L
Sbjct: 268 RNARKYLC----QTLVERGGQLEEEEKFLNAESYYKKALTL 304
>dbj|BAB28115.1| (AK012246) putative [Mus musculus]
Length = 441
Score = 30.9 bits (68), Expect = 6.3
Identities = 26/101 (25%), Positives = 46/101 (44%), Gaps = 10/101 (9%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
G + +A+ Y +A LE+D + ++ G ++ + G KA+E + ALE P
Sbjct: 320 GRHVDAMNEYNKA--LEIDKQNVEALVAR-GALYATKGSLNKAIEDFELALEN---CPTH 373
Query: 67 FNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIAL 107
N +C + + +G E F A Y+K+A+ L
Sbjct: 374 RNARKYLC----QTLVERGGQLEEEEKFLNAESYYKKALTL 410
>dbj|BAB15537.1| (AK026724) unnamed protein product [Homo sapiens]
Length = 170
Score = 30.9 bits (68), Expect = 6.3
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 4 QSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
+ G EA+++Y A+RL+ D D YI N+ + G+ A++ Y AL+ NP L
Sbjct: 90 KERGQLQEAIEHYRHALRLKPDFID-GYI--NLAAALVAAGDMEGAVQAYVSALQYNPDL 146
>dbj|BAB10563.1| (AB008265) gene_id:MDC12.18~pir||F69210~similar to unknown protein
[Arabidopsis thaliana]
Length = 262
Score = 30.9 bits (68), Expect = 6.3
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 3/74 (4%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSY-ILYNIGLIHTSNGEHTKALEYYFRALER 59
+S Q ++EA + Y A L V D+++ IL N+G ++ ++ + + +ALE
Sbjct: 138 ISLQLSDEHSEAEEVYKRA--LTVSKEDQAHAILSNLGNLYRQKKQYEVSKAMFSKALEL 195
Query: 60 NPFLPQAFNNMAVI 73
P A+NN+ ++
Sbjct: 196 KPGYAPAYNNLGLV 209
>gb|AAF47564.1| (AE003472) Dhc62B gene product [Drosophila melanogaster]
Length = 3868
Score = 30.9 bits (68), Expect = 6.3
Identities = 21/66 (31%), Positives = 30/66 (44%), Gaps = 5/66 (7%)
Query: 13 LQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALE----RNP-FLPQAF 67
++N E + + +DP G+ H S GE + FR RNP FLP+ F
Sbjct: 2974 IENVQEELEVPLDPILMRQTFVQGGIKHISLGESVVPVNPNFRLYMTCNLRNPHFLPETF 3033
Query: 68 NNMAVI 73
N + VI
Sbjct: 3034 NKVTVI 3039
>gb|AAF32311.1|AF217788_1 (AF217788) O-glycosyltransferase [Drosophila melanogaster]
gb|AAF57338.1| (AE003787) Ogt gene product [alt 1] [Drosophila melanogaster]
gb|AAG22338.1| (AE003787) Ogt gene product [alt 2] [Drosophila melanogaster]
gb|AAG22339.1| (AE003787) Ogt gene product [alt 3] [Drosophila melanogaster]
Length = 1059
Score = 30.9 bits (68), Expect = 6.3
Identities = 22/60 (36%), Positives = 30/60 (49%), Gaps = 3/60 (5%)
Query: 4 QSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
+ G EAL NY A+RL+ D D YI L+ + E A++ Y AL+ NP L
Sbjct: 129 KERGQLQEALDNYRRAVRLKPDFID-GYINLAAALVAARDME--SAVQAYITALQYNPDL 185
>gb|AAD38597.1|AF145622_1 (AF145622) BcDNA.GH04245 [Drosophila melanogaster]
Length = 1011
Score = 30.9 bits (68), Expect = 6.3
Identities = 22/60 (36%), Positives = 30/60 (49%), Gaps = 3/60 (5%)
Query: 4 QSEGNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFL 63
+ G EAL NY A+RL+ D D YI L+ + E A++ Y AL+ NP L
Sbjct: 129 KERGQLQEALDNYRRAVRLKPDFID-GYINLAAALVAARDME--SAVQAYITALQYNPDL 185
>pir||T04740 hypothetical protein F6G17.110 - Arabidopsis thaliana
emb|CAB38213.1| (AL035601) putative protein [Arabidopsis thaliana]
emb|CAB80411.1| (AL161591) putative protein [Arabidopsis thaliana]
Length = 1013
Score = 30.9 bits (68), Expect = 6.3
Identities = 23/82 (28%), Positives = 35/82 (42%), Gaps = 4/82 (4%)
Query: 37 GLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQ 96
G+ + G +TKA+ + + L+ P P+A ++ E D A
Sbjct: 304 GIAQVNEGNYTKAISIFDKVLKEEPTYPEALIGRGTAYAFQRELESAIADFTKAIQSNPA 363
Query: 97 AAEYWK---QAIALTPGNYIEA 115
A+E WK QA A G Y+EA
Sbjct: 364 ASEAWKRRGQARAAL-GEYVEA 384
>pir||T27773 hypothetical protein ZK20.4 - Caenorhabditis elegans
emb|CAA93779.1| (Z69904) cDNA EST yk428d5.3 comes from this gene~cDNA EST yk428d5.5
comes from this gene~cDNA EST yk537a3.3 comes from this
gene~cDNA EST yk621h11.3 comes from this gene~cDNA EST
yk537a3.5 comes from this gene~cDNA EST yk621h11.5 comes
from this gene [>
Length = 249
Score = 30.9 bits (68), Expect = 6.3
Identities = 29/107 (27%), Positives = 51/107 (47%), Gaps = 13/107 (12%)
Query: 2 SAQSEGNYAEALQNYYEA------MRLEVDPYDRSYILYNIGLIHTSNGEH---TKALEY 52
S Q G Y EALQ ++A + + Y +S Y + ++ G+ +K +
Sbjct: 39 SCQLLGEYMEALQQNFQAAVAIFKKNCDENSYPKSCFKYGMYMLAGKVGDDASLSKMIRP 98
Query: 53 YFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAE 99
A + N +PQ ++++ H+ GE+ R+ DSE AE + +A E
Sbjct: 99 MKIACDAN--IPQGCRYLSLV-HWNGEKD-RKADSEKAERYMRRACE 141
>pir||B71485 probable tpr repeats (o-linked glcnac transferase homolog) -
Chlamydia trachomatis (serotype D, strain UW3/Cx)
gb|AAC68278.1| (AE001338) TPR-motif protein [Chlamydia trachomatis]
Length = 335
Score = 30.9 bits (68), Expect = 6.3
Identities = 28/118 (23%), Positives = 55/118 (45%), Gaps = 11/118 (9%)
Query: 11 EALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNM 70
EA+ +Y + E+ P D L+++G + + +A+ + R + +P+ PQ N
Sbjct: 95 EAIGHYQ--VYTELHPEDIE-CLFSLGSAYHRLLRYEEAIACFDRITQLDPWNPQGLYNK 151
Query: 71 AVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQN--WLKITRRFE 126
AV+ + +G ++ ES + YWK + L Y+ ++N W + T +E
Sbjct: 152 AVVL---SDMEDEEGAIDLLESTVKRNPLYWKAWVKL---GYLLSRNKIWDRATEAYE 203
>sp|P19737|YREC_SYNP2 HYPOTHETICAL 28.7 KD PROTEIN IN RECA 3'REGION
pir||Q3YCRQ hypothetical protein (recA 3' region) - Synechococcus sp. (strain
PCC 7002) (fragment)
gb|AAA88637.1| (M29495) unknown protein [Synechococcus sp.]
Length = 256
Score = 30.9 bits (68), Expect = 6.3
Identities = 25/103 (24%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 8 NYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAF 67
N+A+A+Q+Y +A+ LE + + I +G + G +++A+ Y RA E + F
Sbjct: 58 NFAQAVQHYRQALTLEA---NNARIHGALGYALSQLGNYSEAVTAYRRATELEDDNAEFF 114
Query: 68 NNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPG 110
N + G + GD+ A + + +A + +A + G
Sbjct: 115 NAL-------GFNLAQSGDNRSAINAYQRATQLQPNNLAYSLG 150
>dbj|BAB29698.1| (AK015064) putative [Mus musculus]
Length = 223
Score = 30.5 bits (67), Expect = 8.3
Identities = 25/120 (20%), Positives = 56/120 (45%), Gaps = 17/120 (14%)
Query: 7 GNYAEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQA 66
GN A+A EA++L P D S +++++ + + ++ ++ + +A++ NP +
Sbjct: 114 GNLAQAEAVGREALQLI--PNDHS-LMFSLANVLGKSQKYKESEALFLKAIKANPIVASY 170
Query: 67 FNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITRRFE 126
N+AV+ H G D A ++++ ++ L P +N+ + R+ E
Sbjct: 171 HGNLAVLYHRWGH--------------LDSAKKHYEISLQLDPVAVGTKENYSLLRRKLE 216
>dbj|BAB08428.1| (AB017067) gb|AAF32311.1~gene_id:MJC20.5~similar to unknown protein
[Arabidopsis thaliana]
Length = 565
Score = 30.5 bits (67), Expect = 8.3
Identities = 30/123 (24%), Positives = 53/123 (42%), Gaps = 20/123 (16%)
Query: 10 AEALQNYYEAMRLEVDPYDRSYILYNIGLIHTSNGEHT--------------KALEYYFR 55
A A + Y A+ D +D LYN LI + ++ +A + Y
Sbjct: 206 AFAARKYASAIERNPDDHDA---LYNWALILQESADNVSPDSVSPSKDDLLEEACKKYDE 262
Query: 56 ALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESWFDQAAEYWKQAIALTPGNYIEA 115
A P L A+ N A+ ++A +G ++ AE ++QAA+ +++A+ L +
Sbjct: 263 ATRLCPTLYDAYYNWAIAI---SDRAKIRGRTKEAEELWEQAADNYEKAVQLNWNSSQAL 319
Query: 116 QNW 118
NW
Sbjct: 320 NNW 322
>pir||D82289 polyphosphate kinase VC0723 [imported] - Vibrio cholerae (group O1
strain N16961)
gb|AAF93888.1| (AE004158) polyphosphate kinase [Vibrio cholerae]
Length = 701
Score = 30.5 bits (67), Expect = 8.3
Identities = 27/88 (30%), Positives = 39/88 (43%), Gaps = 6/88 (6%)
Query: 27 YDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGD 86
++R+ +Y + T+N E + F +E NPF P FN++ V Q R D
Sbjct: 459 HERTARIYTDFALLTANQELAAEVRAVFGYIE-NPFRPVKFNHLIVSPRNSRTQIYRLLD 517
Query: 87 SEIAESWFDQAAEYWKQAIALTPGNYIE 114
SEIA A K AI L N ++
Sbjct: 518 SEIA-----NAKAGKKAAITLKVNNLVD 540
>gi|11465458 unknown [Cyanidium caldarium]
gb|AAF12943.1|AF022186_66 (AF022186) unknown [Cyanidium caldarium]
Length = 121
Score = 30.5 bits (67), Expect = 8.3
Identities = 20/96 (20%), Positives = 41/96 (41%), Gaps = 14/96 (14%)
Query: 29 RSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSE 88
+S I ++G+ + + + + YY +++E N NN+A I
Sbjct: 36 QSQIFNSLGMCYFNLNDLELSTHYYLKSIEINNNCTATLNNLARIYE------------- 82
Query: 89 IAESWFDQAAEYWKQAIALTPGNYIEAQNWLKITRR 124
+ F +A + + +A+ P NYI +N ++ R
Sbjct: 83 -KKKLFCEAKNIYLRVLAINPKNYIARKNLTRLNSR 117
>gb|AAC67538.1| (AF081799) developmental protein DG1071 [Dictyostelium discoideum]
Length = 581
Score = 30.5 bits (67), Expect = 8.3
Identities = 21/96 (21%), Positives = 41/96 (41%), Gaps = 10/96 (10%)
Query: 34 YNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIAESW 93
YN+ ++ + G+ KA E Y ++ +P + ++ IC +QGD A W
Sbjct: 8 YNLARLYETMGQVNKAEELYKGIIKEHPNYYDCYLRLSCICK-------QQGDYYEAGEW 60
Query: 94 FDQAAEYW---KQAIALTPGNYIEAQNWLKITRRFE 126
+ + ++A AL ++ + W + FE
Sbjct: 61 IREVLDIQPDNQEAWALYGNLHLYKEEWYPAQKNFE 96
>pir||T31314 hypothetical protein 2 - Cenarchaeum symbiosum
gb|AAC62705.1| (AF083072) hypothetical protein 02 [Cenarchaeum symbiosum]
Length = 271
Score = 30.5 bits (67), Expect = 8.3
Identities = 25/84 (29%), Positives = 37/84 (43%), Gaps = 6/84 (7%)
Query: 1 MSAQSEGNYAEALQNYYEAMR-----LEVDPYDRSYILYNIGLIHTSNGEHTKALEYYFR 55
M Q +G ++ Y +A+ LE+D D N + G+ ALE Y R
Sbjct: 44 MVLQRKGLALNRIRRYSDAITCFDLLLELDDGDAP-AYNNKAIAQAELGDTASALENYGR 102
Query: 56 ALERNPFLPQAFNNMAVICHYRGE 79
A+E +P A+ N AV+ GE
Sbjct: 103 AIEASPRYAPAYFNRAVLLDRLGE 126
>gb|AAC32883.1| (AF083928) polyphosphate kinase [Vibrio cholerae]
Length = 701
Score = 30.5 bits (67), Expect = 8.3
Identities = 27/88 (30%), Positives = 39/88 (43%), Gaps = 6/88 (6%)
Query: 27 YDRSYILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGD 86
++R+ +Y + T+N E + F +E NPF P FN++ V Q R D
Sbjct: 459 HERTARIYTDFALLTANQELAAEVRAVFGYIE-NPFRPVKFNHLIVSPRNSRTQIYRLLD 517
Query: 87 SEIAESWFDQAAEYWKQAIALTPGNYIE 114
SEIA A K AI L N ++
Sbjct: 518 SEIA-----NAKAGKKAAITLKVNNLVD 540
>pir||A70189 hypothetical protein BB0714 - Lyme disease spirochete
gb|AAC67064.1| (AE001171) B. burgdorferi predicted coding region BB0714 [Borrelia
burgdorferi]
Length = 322
Score = 30.5 bits (67), Expect = 8.3
Identities = 24/85 (28%), Positives = 39/85 (45%), Gaps = 17/85 (20%)
Query: 31 YILYNIGLIHTSNGEHTKALEYYFRALERNPFLPQAFNNMAVICHYRGEQAIRQGDSEIA 90
Y+LY G I G++ A YY + LE N + + I R+ D +
Sbjct: 243 YLLY--GDILLDKGDYDSAFNYYNKVLEINSSNSSVYVKIGDI--------YRKKDKD-- 290
Query: 91 ESWFDQAAEYWKQAIALTPGNYIEA 115
+ +A +YW++A+ L P Y+EA
Sbjct: 291 ---YPKARKYWREALNLNP--YLEA 310
>sp|P42460|YCOA_SYNP7 HYPOTHETICAL 45.0 KD PROTEIN IN COBA 5'REGION
pir||S42532 hypothetical protein 1 - Synechococcus sp
emb|CAA50301.1| (X70966) ORF [Synechococcus PCC6301]
Length = 403
Score = 30.5 bits (67), Expect = 8.3
Identities = 18/59 (30%), Positives = 32/59 (53%), Gaps = 8/59 (13%)
Query: 1 MSAQSEGNYAEALQNYYEAMRLEVDPYDRSY------ILYNIGLIHTSNGEHTKALEYY 53
++A++ GNY EA+ Y +A L++DP D S +L+ +G + S +A+ Y
Sbjct: 325 LAARAIGNYPEAIAAYQQA--LQLDPNDPSLYQNLGAVLFQVGQLEASYAAFRQAIAGY 381
Database: nr
Posted date: Mar 14, 2001 1:25 PM
Number of letters in database: 201,912,487
Number of sequences in database: 640,428
Lambda K H
0.319 0.133 0.405
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53204278
Number of Sequences: 640428
Number of extensions: 1993350
Number of successful extensions: 4962
Number of sequences better than 10.0: 132
Number of HSP's better than 10.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 81
Number of HSP's that attempted gapping in prelim test: 4739
Number of HSP's gapped (non-prelim): 289
length of query: 126
length of database: 201,912,487
effective HSP length: 51
effective length of query: 75
effective length of database: 169,250,659
effective search space: 12693799425
effective search space used: 12693799425
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.8 bits)
S2: 67 (30.5 bits)
Lotus japonicus(Cp)