BLAST2 result
BLASTP 2.1.2 [Oct-19-2000]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33180.1 133 aa
(133 letters)
Database: nr
640,428 sequences; 201,912,487 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|11465963 ATPase epsilon subunit [Nicotiana tabacum] >gi|11461... 238 3e-62
sp|P07138|ATPE_IPOBA ATP SYNTHASE EPSILON CHAIN >gi|82301|pir||B... 237 3e-62
emb|CAB67129.1| (AJ271079) ATP synthase epsilon subunit [Oenothe... 237 5e-62
gi|11497534 ATP synthase epsilon subunit [Spinacia oleracea] >gi... 235 2e-61
gi|7525039 ATPase epsilon subunit [Arabidopsis thaliana] >gi|588... 233 5e-61
sp|P09468|ATPE_ARATH ATP SYNTHASE EPSILON CHAIN >gi|81663|pir||S... 231 3e-60
gb|AAF19791.1|AF162208_1 (AF162208) ATPase epsilon chain [Lactuc... 225 1e-58
gb|AAD46915.1|AF163770_2 (AF163770) ATP synthase epsilon subunit... 222 1e-57
sp|P05039|ATPE_PEA ATP SYNTHASE EPSILON CHAIN >gi|81963|pir||B24... 221 3e-57
sp|P30400|ATPE_CUSRE ATP SYNTHASE EPSILON CHAIN >gi|82304|pir||S... 218 3e-56
gi|7524660 H+-ATPase epsilon subunit [Pinus thunbergii] >gi|1168... 188 2e-47
gi|11467198 ATPase epsilon subunit [Zea mays] >gi|114599|sp|P008... 187 4e-47
sp|O47036|ATPE_PICAB ATP SYNTHASE EPSILON CHAIN >gi|7436144|pir|... 186 8e-47
prf||1711264B CF1 ATPase:SUBUNIT=epsilon [Sorghum sp.] 186 1e-46
pir||PWBHE H+-transporting ATP synthase (EC 3.6.1.34) epsilon ch... 185 2e-46
sp|P20859|ATPE_WHEAT ATP SYNTHASE EPSILON CHAIN >gi|67869|pir||P... 185 2e-46
gi|11466793 atpE; ATPase epsilon subunit [Oryza sativa] >gi|1146... 185 2e-46
pir||JQ0592 H+-transporting ATP synthase (EC 3.6.1.34) epsilon c... 182 2e-45
gi|11466708 atpE [Marchantia polymorpha] >gi|114600|sp|P06285|AT... 179 1e-44
sp|Q31793|ATPE_ANTFO ATP SYNTHASE EPSILON CHAIN >gi|7436136|pir|... 172 1e-42
gi|11465726 ATP synthase CF1 epsilon chain [Porphyra purpurea] >... 136 1e-31
gi|7524903 ATP synthase CF1 epsilon chain [Chlorella vulgaris] >... 134 4e-31
gi|11466373 CF1 epsilon subunit of ATP synthase [Mesostigma viri... 133 7e-31
gi|11465582 unknown; ATP synthase CF1 epsilon chain [Cyanidium c... 131 3e-30
gi|11467697 ATP synthase CF1 subunit e [Guillardia theta] >gi|59... 129 2e-29
sp|P07892|ATPE_SYNP7 ATP SYNTHASE EPSILON CHAIN >gi|67862|pir||P... 127 7e-29
sp|Q08808|ATPE_CYACA ATP SYNTHASE EPSILON CHAIN >gi|480091|pir||... 125 3e-28
pir||S75527 H+-transporting ATP synthase (EC 3.6.1.34) epsilon c... 123 8e-28
sp|P26533|ATPE_SYNY3 ATP SYNTHASE EPSILON CHAIN >gi|97643|pir||S... 123 8e-28
sp|P50010|ATPE_PRODI ATP SYNTHASE EPSILON CHAIN >gi|285203|pir||... 122 1e-27
sp|P07891|ATPE_CHLRE ATP SYNTHASE EPSILON CHAIN >gi|67871|pir||P... 121 4e-27
sp|Q05375|ATPE_SYNP1 ATP SYNTHASE EPSILON CHAIN >gi|480500|pir||... 120 7e-27
gb|AAA84147.1| (M17168) CF1/CF0 ATPase epsilon subunit [Chlamydo... 118 3e-26
gi|11467761 CF1 epsilon subunit of ATP synthase [Nephroselmis ol... 118 3e-26
sp|P06542|ATPE_ANASP ATP SYNTHASE EPSILON CHAIN >gi|79754|pir||B... 114 4e-25
emb|CAB53103.1| (AJ245645) ATP synthase CF1 epsilon chain [Proto... 111 4e-24
emb|CAA67542.1| (X99079) subunit epsilon of ATPase [Ochrosphaera... 106 9e-23
gi|11467560 ATP synthase CF1 subunit epsilon [Odontella sinensis... 106 1e-22
gi|11467033 ATP Synthase, epsilon subunit [Euglena gracilis] >gi... 105 3e-22
sp|P26534|ATPE_PYLLI ATP SYNTHASE EPSILON CHAIN >gi|67863|pir||P... 100 1e-20
gi|11467385 epsilon subunit of the F1 portion of ATP synthase [C... 98 4e-20
dbj|BAA83614.1| (AB022018) F1F0-ATPase epsilon subunit [Desulfov... 87 8e-17
dbj|BAB07472.1| (AP001519) ATP synthase epsilon subunit [Bacillu... 85 4e-16
dbj|BAA96810.1| (AB044942) FoF1-ATP synthase epsilon subunit [th... 82 3e-15
gb|AAG48364.1|AF330160_11 (AF330160) ATP synthase epsilon subuni... 80 1e-14
gb|AAB51467.1| (U64318) ATP synthase subunit epsilon [Moorella t... 80 1e-14
sp|P43453|ATPE_ENTHR ATP SYNTHASE EPSILON CHAIN >gi|153574|gb|AA... 79 2e-14
sp|P37812|ATPE_BACSU ATP SYNTHASE EPSILON CHAIN >gi|2118193|pir|... 78 4e-14
sp|P12699|ATPE_BACME ATP SYNTHASE EPSILON CHAIN >gi|67872|pir||P... 74 6e-13
sp|P22480|ATPE_BACFI ATP SYNTHASE EPSILON CHAIN >gi|80097|pir||S... 73 2e-12
sp|P07678|ATPE_BACP3 ATP SYNTHASE EPSILON CHAIN >gi|77461|pir||S... 72 2e-12
sp|P42009|ATPE_BACST ATP SYNTHASE EPSILON CHAIN >gi|534855|dbj|B... 72 3e-12
sp|P41012|ATPE_BACCA ATP SYNTHASE EPSILON CHAIN >gi|533291|dbj|B... 69 2e-11
sp|P95790|ATPE_STRMU ATP SYNTHASE EPSILON CHAIN >gi|7436139|pir|... 69 3e-11
gb|AAD00919.1| (AF001955) proton-translocating ATPase epsilon su... 67 1e-10
dbj|BAA23689.1| (AB006151) proton-translocating ATPase, epsiron ... 66 1e-10
pir||D81970 H+-transporting ATP synthase (EC 3.6.1.34) epsilon c... 66 2e-10
gb|AAK05861.1|AE006406_5 (AE006406) ATP synthase epsilon subunit... 65 4e-10
sp|P29709|ATPE_PROMO ATP SYNTHASE EPSILON CHAIN, SODIUM ION SPEC... 64 5e-10
sp|P50011|ATPE_STRLI ATP SYNTHASE EPSILON CHAIN >gi|480960|pir||... 64 7e-10
dbj|BAA23756.1| (AB009314) proton-translocating ATPase, epsiron ... 64 9e-10
sp|P43718|ATPE_HAEIN ATP SYNTHASE EPSILON CHAIN >gi|1073881|pir|... 64 9e-10
gb|AAF22499.1|AF098522_9 (AF098522) F1F0-ATPase subunit epsilon ... 63 2e-09
gb|AAD16427.1| (AF101055) ATP synthase subunit epsilon [Clostrid... 62 3e-09
pir||F81024 ATP synthase F1, epsilon chain NMB1933 [imported] - ... 62 3e-09
gb|AAF02208.1|AF059739_8 (AF059739) H+-ATPase cytoplasmic F1-par... 62 3e-09
sp|P50009|ATPE_ACEWO ATP SYNTHASE EPSILON CHAIN, SODIUM ION SPEC... 61 8e-09
pdb|1BSH|A Chain A, Solution Structure Of The Epsilon Subunit Of... 60 1e-08
gb|AAF19363.1|AF188265_9 (AF188265) ATP synthase subunit epsilon... 60 1e-08
sp|P00832|ATPE_ECOLI ATP SYNTHASE EPSILON CHAIN >gi|67860|pir||P... 60 1e-08
sp|P30159|ATPE_DICDH ATP SYNTHASE EPSILON CHAIN >gi|99333|pir||S... 60 1e-08
gb|AAG58934.1|AE005605_2 (AE005605) membrane-bound ATP synthase,... 60 1e-08
emb|CAA23528.1| (V00267) reading frame epsilon [Escherichia coli] 59 2e-08
pdb|1AQT| Epsilon Subunit Of F1f0-Atp Synthase From Escherichi... 58 4e-08
sp|Q10595|ATPE_MYCTU ATP SYNTHASE EPSILON CHAIN >gi|7436147|pir|... 57 9e-08
emb|CAC31527.1| (AL583920) ATP synthase [epsilon] chain [Mycobac... 57 1e-07
sp|P45822|ATPE_MYCLE ATP SYNTHASE EPSILON CHAIN >gi|7436143|pir|... 57 1e-07
sp|P41171|ATPE_THIFE ATP SYNTHASE EPSILON CHAIN >gi|154675|gb|AA... 57 1e-07
gb|AAK03579.1| (AE006185) AtpC [Pasteurella multocida] 55 3e-07
pir||C72231 ATP synthase F1, subunit epsilon - Thermotoga mariti... 52 3e-06
sp|Q9ZK82|ATPE_HELPJ ATP SYNTHASE EPSILON CHAIN >gi|7436140|pir|... 52 4e-06
pir||F82715 ATP synthase, epsilon chain XF1142 [imported] - Xyle... 51 7e-06
sp|P05442|ATPE_RHORU ATP SYNTHASE EPSILON CHAIN >gi|67861|pir||P... 51 7e-06
pir||E82036 ATP synthase F1, epsilon chain VC2763 [imported] - V... 50 1e-05
sp|P12988|ATPE_VIBAL ATP SYNTHASE EPSILON CHAIN >gi|79240|pir||S... 50 2e-05
sp|P56084|ATPE_HELPY ATP SYNTHASE EPSILON CHAIN 49 3e-05
pir||C64661 ATP synthase F1, subunit epsilon - Helicobacter pylo... 49 3e-05
pir||D81427 H+-transporting ATP synthase (EC 3.6.1.34) F1 sector... 48 3e-05
pir||B82952 ATP synthase epsilon chain PA5553 [imported] - Pseud... 48 4e-05
gb|AAF46561.1| (AE003449) CG2968 gene product [Drosophila melano... 47 1e-04
dbj|BAB08158.1| (AB046112) H+-ATPase epsilon subunit [Corynebact... 46 2e-04
sp|Q96252|ATP4_ARATH ATP SYNTHASE DELTA' CHAIN, MITOCHONDRIAL PR... 45 5e-04
sp|Q92196|ATPD_AGABI ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRE... 43 0.001
sp|Q9ZCF3|ATPE_RICPR ATP SYNTHASE EPSILON CHAIN >gi|7467586|pir|... 43 0.001
sp|P72248|ATPE_RHOCA ATP SYNTHASE EPSILON CHAIN >gi|1524325|emb|... 43 0.001
sp|P35111|ATPE_CHLLI ATP SYNTHASE EPSILON CHAIN >gi|421346|pir||... 42 0.003
sp|P57125|ATPE_BUCAI ATP SYNTHASE EPSILON CHAIN >gi|10038702|dbj... 41 0.007
dbj|BAB22016.1| (AK002330) putative [Mus musculus] 39 0.017
emb|CAB89879.1| (AL354632) atp synthase delta chain, mitochondri... 39 0.017
pir||C70359 ATP synthase F1 epsilon subunit - Aquifex aeolicus >... 39 0.017
dbj|BAB31035.1| (AK018011) putative [Mus musculus] 39 0.022
dbj|BAB23806.1| (AK005082) putative [Mus musculus] 39 0.022
dbj|BAB27577.1| (AK011374) putative [Mus musculus] 38 0.038
sp|O51871|ATPE_BUCAP ATP SYNTHASE EPSILON CHAIN >gi|2827017|gb|A... 38 0.038
pir||G82928 ATP synthase epsilon chain UU128 [imported] - Ureapl... 38 0.065
gi|12045260 ATP synthase F1, subunit epsilon (atpC) [Mycoplasma ... 38 0.065
sp|P05441|ATPE_RHOBL ATP SYNTHASE EPSILON CHAIN >gi|79549|pir||S... 38 0.065
sp|P78700|ATPD_KLULA ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRE... 37 0.11
sp|Q09544|ATPD_CAEEL ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRE... 37 0.11
gi|6320200 ATP synthase delta subunit; Atp16p [Saccharomyces cer... 37 0.11
sp|P35434|ATPD_RAT ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECU... 36 0.19
sp|Q40089|ATP4_IPOBA ATP SYNTHASE DELTA' CHAIN, MITOCHONDRIAL PR... 36 0.25
sp|Q41000|ATP4_PEA ATP SYNTHASE DELTA' CHAIN, MITOCHONDRIAL PREC... 35 0.43
pdb|1E79|H Chain H, Bovine F1-Atpase Inhibited By Dccd (Dicycloh... 34 0.96
sp|P05630|ATPD_BOVIN ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRE... 34 0.96
gi|4502297 ATP synthase, H+ transporting, mitochondrial F1 compl... 33 1.3
gb|AAG55260.1|AE005269_4 (AE005269) putative membrane protein [E... 33 1.7
sp|P75830|YBJY_ECOLI HYPOTHETICAL 41.7 KDA PROTEIN IN AQPZ-CSPD ... 33 1.7
sp|P56525|ATPD_NEUCR ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRE... 33 1.7
pir||F64826 probable membrane protein b0878 - Escherichia coli >... 33 1.7
pir||B83186 probable RND efflux membrane fusion protein precurso... 32 2.8
dbj|BAA76954.1| (AB020609) human Ku80 autoantigen homologue [Xen... 32 2.8
gb|AAD34597.1|AF147739_1 (AF147739) myosin XI [Zea mays] 32 3.7
gb|AAC38050.1| (AF028006) ATP synthase epsilon subunit [Methanos... 31 4.9
sp|P54576|MCPC_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPC >g... 31 6.4
sp|Q50332|ATPE_MYCPN ATP SYNTHASE EPSILON CHAIN >gi|2127621|pir|... 31 6.4
gb|AAK03081.1| (AE006139) unknown [Pasteurella multocida] 31 8.4
gb|AAA34590.1| (M55275) endonuclease SceI 75 kDa subunit [Saccha... 31 8.4
gi|6322505 Mitochondrial matrix protein involved in protein impo... 31 8.4
>gi|11465963 ATPase epsilon subunit [Nicotiana tabacum]
sp|P00834|ATPE_TOBAC ATP SYNTHASE EPSILON CHAIN
pir||PWNTE H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - common
tobacco chloroplast
emb|CAA77359.1| (Z00044) ATPase epsilon subunit [Nicotiana tabacum]
gb|AAA84677.1| (K00507) ATPase epsilon subunit [Nicotiana tabacum]
prf||1211235AM ATPase epsilon [Nicotiana tabacum]
Length = 133
Score = 238 bits (600), Expect = 3e-62
Identities = 117/133 (87%), Positives = 129/133 (96%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTLNL VLTPNRIVWDS+V+EI+LSTNSGQ+GILPNHAP+A A+DIGILRIRLNDQWLTM
Sbjct: 1 MTLNLSVLTPNRIVWDSEVEEIVLSTNSGQIGILPNHAPIATAVDIGILRIRLNDQWLTM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLE+AEAN+K+A+G+RQ IEANLALR
Sbjct: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLELAEANVKKAEGRRQKIEANLALR 120
Query: 121 RARTRVESINMIS 133
RARTRVE+IN IS
Sbjct: 121 RARTRVEAINPIS 133
>sp|P07138|ATPE_IPOBA ATP SYNTHASE EPSILON CHAIN
pir||B26850 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - sweet
potato chloroplast
emb|CAA29394.1| (X05970) epsilon-subunit (AA 1-399) [Ipomoea batatas]
Length = 133
Score = 237 bits (599), Expect = 3e-62
Identities = 118/133 (88%), Positives = 127/133 (94%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTL LCVLTPNRIVWDS+VKEIILSTNSGQ+GILPNHAP+A A+DIGILRIRLNDQW+TM
Sbjct: 1 MTLKLCVLTPNRIVWDSEVKEIILSTNSGQIGILPNHAPIATAVDIGILRIRLNDQWVTM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFARIGNNEITVLVNDAEKGSDID EAQQTLEIAEAN ++A+GKRQTIEANLALR
Sbjct: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDSLEAQQTLEIAEANFRKAEGKRQTIEANLALR 120
Query: 121 RARTRVESINMIS 133
RARTRVE+IN IS
Sbjct: 121 RARTRVEAINAIS 133
>emb|CAB67129.1| (AJ271079) ATP synthase epsilon subunit [Oenothera elata subsp.
hookeri]
Length = 133
Score = 237 bits (598), Expect = 5e-62
Identities = 115/133 (86%), Positives = 128/133 (95%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTLNLCVLTPNRIVWDS+VKEIILSTNSGQ+G+LPNHAP+A A+DIGILRIR N QWLTM
Sbjct: 1 MTLNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATAVDIGILRIRQNGQWLTM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFARIGNNEIT+LVNDAEKGSDIDPQEAQ+TL +AEAN ++A+GKRQTIEANLALR
Sbjct: 61 ALMGGFARIGNNEITILVNDAEKGSDIDPQEAQETLGLAEANFRKAEGKRQTIEANLALR 120
Query: 121 RARTRVESINMIS 133
RARTRVE+IN+IS
Sbjct: 121 RARTRVEAINVIS 133
>gi|11497534 ATP synthase epsilon subunit [Spinacia oleracea]
sp|P00833|ATPE_SPIOL ATP SYNTHASE EPSILON CHAIN
pir||PWSPE H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - spinach
chloroplast
gb|AAA84627.1| (J01441) ATPase epsilon subunit [Spinacia oleracea]
emb|CAB88735.1| (AJ400848) ATP synthase epsilon subunit [Spinacia oleracea]
Length = 134
Score = 235 bits (592), Expect = 2e-61
Identities = 114/133 (85%), Positives = 127/133 (94%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTLNLCVLTPNR +W+S+VKEIILSTNSGQ+G+LPNHAP A A+DIGILRIRLNDQWLT+
Sbjct: 1 MTLNLCVLTPNRSIWNSEVKEIILSTNSGQIGVLPNHAPTATAVDIGILRIRLNDQWLTL 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFARIGNNEIT+LVNDAE+GSDIDPQEAQQTLEIAEANL++A+GKRQ IEANLALR
Sbjct: 61 ALMGGFARIGNNEITILVNDAERGSDIDPQEAQQTLEIAEANLRKAEGKRQKIEANLALR 120
Query: 121 RARTRVESINMIS 133
RARTRVE+ N IS
Sbjct: 121 RARTRVEASNTIS 133
>gi|7525039 ATPase epsilon subunit [Arabidopsis thaliana]
dbj|BAA84391.1| (AP000423) ATPase epsilon subunit [Arabidopsis thaliana]
Length = 132
Score = 233 bits (589), Expect = 5e-61
Identities = 114/132 (86%), Positives = 127/132 (95%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTLNLCVLTPNRIVWDS+VKEIILSTNSGQ+G+L NHAP+A A+DIGIL+IRL +QWLTM
Sbjct: 1 MTLNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLANHAPIATAVDIGILKIRLANQWLTM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFARIGNNEIT+LVNDAEK SDIDPQEAQQTLEIAEANL++A+GKRQTIEANLALR
Sbjct: 61 ALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALR 120
Query: 121 RARTRVESINMI 132
RARTRVE++N I
Sbjct: 121 RARTRVEALNTI 132
>sp|P09468|ATPE_ARATH ATP SYNTHASE EPSILON CHAIN
pir||S01903 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Arabidopsis thaliana chloroplast
emb|CAA31381.1| (X12889) Cf1 ATPase epsilon subunit (AA 1 - 132) [Arabidopsis
thaliana]
Length = 132
Score = 231 bits (582), Expect = 3e-60
Identities = 113/132 (85%), Positives = 126/132 (94%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTLNLCVLTPNRIVWDS+V+EIILSTNSGQ+G+L NHAP+A A+DIGIL IRL +QWLTM
Sbjct: 1 MTLNLCVLTPNRIVWDSEVEEIILSTNSGQIGVLANHAPIATAVDIGILTIRLANQWLTM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFARIGNNEIT+LVNDAEK SDIDPQEAQQTLEIAEANL++A+GKRQTIEANLALR
Sbjct: 61 ALMGGFARIGNNEITILVNDAEKNSDIDPQEAQQTLEIAEANLRKAEGKRQTIEANLALR 120
Query: 121 RARTRVESINMI 132
RARTRVE++N I
Sbjct: 121 RARTRVEALNTI 132
>gb|AAF19791.1|AF162208_1 (AF162208) ATPase epsilon chain [Lactuca sativa]
Length = 126
Score = 225 bits (568), Expect = 1e-58
Identities = 111/126 (88%), Positives = 121/126 (95%)
Query: 8 LTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMGGFA 67
LTPNRIVWDS+VKEIILSTNSGQ+G+LPNHAP+A ++DIGILRIRLNDQWLTMALMGGFA
Sbjct: 1 LTPNRIVWDSEVKEIILSTNSGQIGVLPNHAPIATSVDIGILRIRLNDQWLTMALMGGFA 60
Query: 68 RIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRRARTRVE 127
RIGNNEITVLVNDAEK DIDPQEAQQTLEIAEA L++A+GKRQTIEANLALRRARTRVE
Sbjct: 61 RIGNNEITVLVNDAEKSGDIDPQEAQQTLEIAEAALRKAEGKRQTIEANLALRRARTRVE 120
Query: 128 SINMIS 133
+IN IS
Sbjct: 121 AINAIS 126
>gb|AAD46915.1|AF163770_2 (AF163770) ATP synthase epsilon subunit [Medicago sativa]
Length = 137
Score = 222 bits (560), Expect = 1e-57
Identities = 111/130 (85%), Positives = 122/130 (93%), Gaps = 1/130 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRL-NDQWLT 59
MTLNLCVLTPNR VWDS+VKEIILSTNSGQ+G+L NHAP+A ALDIGIL+IRL N QW+T
Sbjct: 1 MTLNLCVLTPNRTVWDSEVKEIILSTNSGQIGVLKNHAPIATALDIGILKIRLTNQQWVT 60
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
MALMGGFARIGNNEIT+LVNDAEK DIDPQEAQQTL+IAEANL +A+GKRQTIEANLAL
Sbjct: 61 MALMGGFARIGNNEITILVNDAEKSIDIDPQEAQQTLKIAEANLNKAEGKRQTIEANLAL 120
Query: 120 RRARTRVESI 129
RRARTRVE+I
Sbjct: 121 RRARTRVETI 130
>sp|P05039|ATPE_PEA ATP SYNTHASE EPSILON CHAIN
pir||B24467 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - garden
pea chloroplast
emb|CAA27482.1| (X03852) ATP synthetase epsilon [Pisum sativum]
Length = 137
Score = 221 bits (557), Expect = 3e-57
Identities = 107/129 (82%), Positives = 121/129 (92%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MT NLCVLTPNRIVWDS+VKEIILSTNSGQ+G+L NHAP+A ALDIGILRIRL D+WLTM
Sbjct: 1 MTFNLCVLTPNRIVWDSEVKEIILSTNSGQIGVLQNHAPIATALDIGILRIRLKDRWLTM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFARIGNNEIT+LV DAE SDI+PQEAQQTL+IAEANL +A+GKR+TIEANL+LR
Sbjct: 61 ALMGGFARIGNNEITILVTDAESASDINPQEAQQTLQIAEANLNKAEGKRETIEANLSLR 120
Query: 121 RARTRVESI 129
RA+TRVE+I
Sbjct: 121 RAKTRVEAI 129
>sp|P30400|ATPE_CUSRE ATP SYNTHASE EPSILON CHAIN
pir||S20475 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - southern
Asian dodder chloroplast
emb|CAA43865.1| (X61698) H(+)-transporting ATP synthase [Cuscuta reflexa]
Length = 136
Score = 218 bits (549), Expect = 3e-56
Identities = 106/133 (79%), Positives = 122/133 (91%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTL LCVLTPNRI WDS+V+EIILSTNSGQ+GILP H P+A ++DIGILRIRLN +WLTM
Sbjct: 1 MTLKLCVLTPNRIFWDSEVEEIILSTNSGQIGILPTHTPIATSVDIGILRIRLNGRWLTM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFARIGNNEITVLVNDAE+ SDIDPQEAQQT+EIAEAN ++AKGKRQ IEAN+AL
Sbjct: 61 ALMGGFARIGNNEITVLVNDAERSSDIDPQEAQQTVEIAEANFRKAKGKRQKIEANIALC 120
Query: 121 RARTRVESINMIS 133
RARTRV++++ IS
Sbjct: 121 RARTRVKAVSPIS 133
>gi|7524660 H+-ATPase epsilon subunit [Pinus thunbergii]
sp|P41623|ATPE_PINTH ATP SYNTHASE EPSILON CHAIN
pir||T07493 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - Japanese
black pine chloroplast
dbj|BAA04371.1| (D17510) H+-ATPase epsilon subunit [Pinus thunbergii]
Length = 137
Score = 188 bits (473), Expect = 2e-47
Identities = 88/130 (67%), Positives = 114/130 (87%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTLNL VL+PNR++WDS+VKEIILSTNSGQ+G+LPNHA L A+DIG+++IRLN QW TM
Sbjct: 1 MTLNLRVLSPNRVIWDSEVKEIILSTNSGQIGVLPNHASLVAAVDIGVMKIRLNGQWSTM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
A+MGGFA+I ++ IT+LVN+AE+ DIDP+EAQ+ IA+A+L A+GKRQ IEA+LAL+
Sbjct: 61 AMMGGFAKIDSDRITILVNNAERDVDIDPREAQENFRIAKADLARAEGKRQAIEADLALK 120
Query: 121 RARTRVESIN 130
RARTR+E+IN
Sbjct: 121 RARTRLEAIN 130
>gi|11467198 ATPase epsilon subunit [Zea mays]
sp|P00835|ATPE_MAIZE ATP SYNTHASE EPSILON CHAIN
pir||PWZME H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - maize
chloroplast
gb|AAA85357.1| (J01421) coupling factor epsilon subunit [Zea mays]
emb|CAA60292.1| (X86563) ATPase epsilon subunit [Zea mays]
Length = 137
Score = 187 bits (471), Expect = 4e-47
Identities = 94/133 (70%), Positives = 110/133 (82%), Gaps = 1/133 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRL-NDQWLT 59
M LNL VLTP RI+WD +VKEIILSTNSGQ+G+LPNHAP+ A+D+G LRIRL NDQWLT
Sbjct: 1 MKLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLT 60
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
L GFARI NNEI +L NDAE GSDIDP+EAQQ LEIAEANL +A+G ++ +EA LAL
Sbjct: 61 AVLWSGFARIVNNEIIILGNDAELGSDIDPEEAQQALEIAEANLSKAEGTKELVEAKLAL 120
Query: 120 RRARTRVESINMI 132
RRAR RVE++N I
Sbjct: 121 RRARIRVEAVNWI 133
>sp|O47036|ATPE_PICAB ATP SYNTHASE EPSILON CHAIN
pir||T14828 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - Norway
spruce chloroplast
emb|CAA04457.1| (AJ001004) H+-ATP synthase subunit E [Picea abies]
Length = 137
Score = 186 bits (468), Expect = 8e-47
Identities = 88/130 (67%), Positives = 115/130 (87%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTLNL VL+PNR++WDS+VKEIILSTNSGQ+G+LPNHA L A+DIG+++IRLN QW TM
Sbjct: 1 MTLNLRVLSPNRVIWDSEVKEIILSTNSGQIGVLPNHASLVAAVDIGVMKIRLNGQWSTM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFA+I N+ ITVLVN+AE+ DID +EAQ+T ++A+A+L A+GKRQ IEA++AL+
Sbjct: 61 ALMGGFAKIDNDRITVLVNNAERDVDIDLKEAQETFKVAKADLARAEGKRQAIEADVALK 120
Query: 121 RARTRVESIN 130
RARTR+E+I+
Sbjct: 121 RARTRLEAIS 130
>prf||1711264B CF1 ATPase:SUBUNIT=epsilon [Sorghum sp.]
Length = 137
Score = 186 bits (467), Expect = 1e-46
Identities = 94/133 (70%), Positives = 110/133 (82%), Gaps = 1/133 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRL-NDQWLT 59
M LNL VLTP RI+WD +VKEIILSTNSGQ+G+LPNHAP+ A+D+G LRIRL NDQWLT
Sbjct: 1 MKLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLT 60
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
LM G ARI NNEI +L NDAE GSDIDP+EAQQ LEIAEANL +A+G ++ +EA LAL
Sbjct: 61 AVLMSGPARIVNNEIIILGNDAELGSDIDPEEAQQALEIAEANLSKAEGTKELVEAKLAL 120
Query: 120 RRARTRVESINMI 132
RRAR RVE++N I
Sbjct: 121 RRARIRVEAVNWI 133
>pir||PWBHE H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - barley
chloroplast
Length = 137
Score = 185 bits (464), Expect = 2e-46
Identities = 92/133 (69%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRL-NDQWLT 59
M LNL VLTP RI+WD +VKEIILSTNSGQ+G+LPNHAP+ A+D+G LRIRL NDQWLT
Sbjct: 1 MKLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLT 60
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
L GFARI NNEI +L NDAE GSDIDP+EAQ+ LEIAEANL +A+G + +EA LAL
Sbjct: 61 AVLWSGFARIVNNEIIILGNDAELGSDIDPEEAQKALEIAEANLSKAEGTKSLVEAKLAL 120
Query: 120 RRARTRVESINMI 132
RRAR R+E++N I
Sbjct: 121 RRARIRIEAVNWI 133
>sp|P20859|ATPE_WHEAT ATP SYNTHASE EPSILON CHAIN
pir||PWWTE H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - wheat
chloroplast
gb|AAA84727.1| (M16843) ATP synthase epsilon subunit [Triticum aestivum]
dbj|BAA01871.1| (D11098) 'ATP synthase epsilon subunit' [Aegilops columnaris]
dbj|BAA01873.1| (D11099) 'ATP synthase epsilon subunit' [Aegilops crassa]
emb|CAA25115.1| (X00408) atpE (subunit E of ATPase) (1493 is 3rd base in codon)
[Hordeum vulgare]
Length = 137
Score = 185 bits (464), Expect = 2e-46
Identities = 92/133 (69%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRL-NDQWLT 59
M LNL VLTP RI+WD +VKEIILSTNSGQ+G+LPNHAP+ A+D+G LRIRL NDQWLT
Sbjct: 1 MKLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLT 60
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
L GFARI NNEI +L NDAE GSDIDP+EAQ+ LEIAEANL +A+G + +EA LAL
Sbjct: 61 AVLWSGFARIVNNEIIILGNDAELGSDIDPEEAQKALEIAEANLSKAEGTKDLVEAKLAL 120
Query: 120 RRARTRVESINMI 132
RRAR R+E++N I
Sbjct: 121 RRARIRIEAVNWI 133
>gi|11466793 atpE; ATPase epsilon subunit [Oryza sativa]
sp|P12086|ATPE_ORYSA ATP SYNTHASE EPSILON CHAIN
pir||PWRZE H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - rice
chloroplast
emb|CAA34002.1| (X15901) atpE; ATPase epsilon subunit [Oryza sativa]
gb|AAA84589.1| (M31464) atpE gene product [Oryza sativa]
prf||1603356AH ATPase epsilon [Oryza sativa]
Length = 137
Score = 185 bits (464), Expect = 2e-46
Identities = 92/133 (69%), Positives = 109/133 (81%), Gaps = 1/133 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRL-NDQWLT 59
M LNL VLTP RI+WD +VKEIILSTNSGQ+G+LPNHAP+ A+D+G LRIRL NDQWLT
Sbjct: 1 MKLNLYVLTPKRIIWDCEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLT 60
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
L GFARI NNEI +L NDAE GSDIDP+EAQQ LEIAEAN+ A+G ++ +EA +AL
Sbjct: 61 AVLWSGFARIVNNEIIILGNDAELGSDIDPEEAQQALEIAEANVSRAEGTKELVEAKVAL 120
Query: 120 RRARTRVESINMI 132
RRAR RVE++N I
Sbjct: 121 RRARIRVEAVNWI 133
>pir||JQ0592 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - rice
chloroplast
dbj|BAA00335.1| (D00432) ATP synthetase epsilon subunit [Oryza sativa]
Length = 137
Score = 182 bits (456), Expect = 2e-45
Identities = 91/133 (68%), Positives = 108/133 (80%), Gaps = 1/133 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRL-NDQWLT 59
M LNL VLTP RI+W +VKEIILSTNSGQ+G+LPNHAP+ A+D+G LRIRL NDQWLT
Sbjct: 1 MKLNLYVLTPKRIIWACEVKEIILSTNSGQIGVLPNHAPINTAVDMGPLRIRLLNDQWLT 60
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
L GFARI NNEI +L NDAE GSDIDP+EAQQ LEIAEAN+ A+G ++ +EA +AL
Sbjct: 61 AVLWSGFARIVNNEIIILGNDAELGSDIDPEEAQQALEIAEANVSRAEGTKELVEAKVAL 120
Query: 120 RRARTRVESINMI 132
RRAR RVE++N I
Sbjct: 121 RRARIRVEAVNWI 133
>gi|11466708 atpE [Marchantia polymorpha]
sp|P06285|ATPE_MARPO ATP SYNTHASE EPSILON CHAIN
pir||PWLVE H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
liverwort (Marchantia polymorpha) chloroplast
emb|CAA28090.1| (X04465) atpE [Marchantia polymorpha]
Length = 135
Score = 179 bits (450), Expect = 1e-44
Identities = 88/132 (66%), Positives = 111/132 (83%), Gaps = 1/132 (0%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMAL 62
LNL ++ PNRIVW+SD++EIILSTNSGQ+GILPNHA + ALDIGI++IRLNDQW TMAL
Sbjct: 2 LNLRIMAPNRIVWNSDIQEIILSTNSGQIGILPNHASVLTALDIGIVKIRLNDQWSTMAL 61
Query: 63 MGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKG-KRQTIEANLALRR 121
MGGFA I NN +T+LVNDAEK S+ID QEAQ+T + A+ NL+EA+G K++ IEA L +R
Sbjct: 62 MGGFAMIDNNNLTILVNDAEKASEIDYQEAQETFQKAKTNLEEAEGNKKKEIEALLVFKR 121
Query: 122 ARTRVESINMIS 133
A+ R+E+INM S
Sbjct: 122 AKARLEAINMAS 133
>sp|Q31793|ATPE_ANTFO ATP SYNTHASE EPSILON CHAIN
pir||S71145 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Anthoceros formosae chloroplast
dbj|BAA07794.1| (D43695) atpE [Anthoceros formosae]
Length = 138
Score = 172 bits (432), Expect = 1e-42
Identities = 81/133 (60%), Positives = 112/133 (83%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTLNL V+ PNRIVW+S+V+EI+ STNSG +G+LPNHAPL ALDIGI++I LN +W TM
Sbjct: 1 MTLNLRVMAPNRIVWNSEVEEIVPSTNSGXIGVLPNHAPLLTALDIGIIKICLNGEWSTM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFA I NN +T+LVN+AEK ++I+PQEA++ ++A+ +L +A+G +Q IEANLA +
Sbjct: 61 ALMGGFAMIDNNGMTILVNEAEKATEINPQEARENYKMAQKDLAKAEGGKQKIEANLAFK 120
Query: 121 RARTRVESINMIS 133
RA+ R+E+I++IS
Sbjct: 121 RAKARLEAIDVIS 133
>gi|11465726 ATP synthase CF1 epsilon chain [Porphyra purpurea]
sp|P51260|ATPE_PORPU ATP SYNTHASE EPSILON CHAIN
pir||S73181 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - red alga
(Porphyra purpurea) chloroplast
gb|AAC08146.1| (U38804) ATP synthase CF1 epsilon chain [Porphyra purpurea]
Length = 134
Score = 136 bits (339), Expect = 1e-31
Identities = 62/133 (46%), Positives = 96/133 (71%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTLN+ ++ P+R VWD++ +EIIL +++GQ+GIL HAPL ALDIG++R+R++ +W+ +
Sbjct: 1 MTLNIRIIAPDRTVWDAEAQEIILPSSTGQLGILTGHAPLLTALDIGVMRVRVDKEWMPI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
L+GGFA I NN++T+LVN AE+ S ID EA++ L+ A L +A ++ IEA +R
Sbjct: 61 VLLGGFAEIENNQLTILVNGAEEASQIDLVEAEKNLDTATQLLNDASSSKEKIEATQNIR 120
Query: 121 RARTRVESINMIS 133
+AR RV++ S
Sbjct: 121 KARARVQAATAAS 133
>gi|7524903 ATP synthase CF1 epsilon chain [Chlorella vulgaris]
sp|P32979|ATPE_CHLVU ATP SYNTHASE EPSILON CHAIN
pir||T07333 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Chlorella vulgaris chloroplast
dbj|BAA01768.1| (D10997) ATPase F1 epsilon subunit [Chlorella ellipsoidea]
dbj|BAA57981.1| (AB001684) ATP synthase CF1 epsilon chain [Chlorella vulgaris]
Length = 134
Score = 134 bits (334), Expect = 4e-31
Identities = 60/132 (45%), Positives = 89/132 (66%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTL +C++TP+RI W+ EIIL TN+GQ+G+L NHAPL ALDIG+ IR N W +
Sbjct: 1 MTLQVCIMTPDRIFWNDQADEIILPTNTGQMGVLTNHAPLITALDIGVTLIRSNSNWNPV 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
ALMGGFA + N++T+LVN+AE I EA+ + A+ L++++G++Q +EA +
Sbjct: 61 ALMGGFALVKQNQVTILVNEAESAQTIGVDEAEIAFQEAKTKLEQSQGEKQRVEATFVFK 120
Query: 121 RARTRVESINMI 132
RAR R + + +
Sbjct: 121 RARARYQVVKQL 132
>gi|11466373 CF1 epsilon subunit of ATP synthase [Mesostigma viride]
sp|Q9MUT4|ATPE_MESVI ATP SYNTHASE EPSILON CHAIN
gb|AAF43817.1|AF166114_29 (AF166114) CF1 epsilon subunit of ATP synthase [Mesostigma viride]
Length = 133
Score = 133 bits (332), Expect = 7e-31
Identities = 64/129 (49%), Positives = 95/129 (73%), Gaps = 1/129 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIR-LNDQWLT 59
M+ + ++ PN I+WDS+ +EIILSTN+G++G+L NH L LDIG +RIR LN+QW T
Sbjct: 1 MSFQVRIIAPNGIIWDSEAEEIILSTNTGKIGVLTNHTSLLTGLDIGTIRIRALNNQWNT 60
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ALM GFA I +N T++V++AE G++I +EAQ LE A++ AKG + +EANLA+
Sbjct: 61 LALMSGFAVIKDNVATIIVSEAENGANIKSEEAQTQLEEAKSYFNTAKGTKNEVEANLAV 120
Query: 120 RRARTRVES 128
+RA TR+++
Sbjct: 121 KRAETRLKA 129
>gi|11465582 unknown; ATP synthase CF1 epsilon chain [Cyanidium caldarium]
gb|AAF13019.1|AF022186_193 (AF022186) unknown; ATP synthase CF1 epsilon chain [Cyanidium
caldarium]
Length = 133
Score = 131 bits (327), Expect = 3e-30
Identities = 62/129 (48%), Positives = 96/129 (74%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M L + V+TP+R+VW V+EIIL +++GQ+GIL NHAPL ALDIG++R R+ + W+ +
Sbjct: 1 MALTVKVITPDRVVWKKTVEEIILPSSTGQLGILMNHAPLLTALDIGVMRARMVNTWVPL 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
L+GGFA+I NN +T++V+DAE+ ID +EA + L + AN+++A+ R+ IE+ LR
Sbjct: 61 VLLGGFAQIDNNLVTIIVSDAEEVKAIDEEEANKLLAASLANMEKAQSNREKIESMQNLR 120
Query: 121 RARTRVESI 129
RAR R+++I
Sbjct: 121 RARARMQAI 129
>gi|11467697 ATP synthase CF1 subunit e [Guillardia theta]
sp|O78492|ATPE_GUITH ATP SYNTHASE EPSILON CHAIN
gb|AAC35683.1| (AF041468) ATP synthase CF1 subunit e [Guillardia theta]
Length = 131
Score = 129 bits (320), Expect = 2e-29
Identities = 57/130 (43%), Positives = 93/130 (70%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M++++ ++ P+R VWD++ +E+IL +++GQ+GIL HAPL ALDIG++R+R++ W +
Sbjct: 1 MSIHISIIAPDRTVWDANAEEVILPSSTGQLGILKGHAPLLTALDIGVMRVRVDRDWTPI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
L+GGFA I N+E+T+LVN AE+ S ID +AQ+ LE EA ++ IEA LR
Sbjct: 61 VLLGGFAEIENDELTILVNGAEEASQIDRDQAQRDLEEMTVKFNEATTNKERIEATQNLR 120
Query: 121 RARTRVESIN 130
+AR R+++++
Sbjct: 121 KARARLQAVS 130
>sp|P07892|ATPE_SYNP7 ATP SYNTHASE EPSILON CHAIN
pir||PWYCE H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Synechococcus sp. (strain PCC 6301)
emb|CAA29363.1| (X05925) epsilon-subunit (AA 1-137) [Synechococcus PCC6301]
gb|AAB82021.1| (U04356) epsilon subunit of ATP synthase [Synechococcus sp. PCC
7942]
Length = 137
Score = 127 bits (315), Expect = 7e-29
Identities = 61/130 (46%), Positives = 90/130 (68%), Gaps = 2/130 (1%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M+L + V+ P+R VWD+ +E+IL + +GQ+GILP HAPL ALD G+LR+R + +WL +
Sbjct: 1 MSLTVRVIAPDRTVWDAPAQEVILPSTTGQLGILPGHAPLLSALDTGVLRVRADKEWLAI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAK--GKRQTIEANLA 118
A++GGFA + NNE+TVLVN AE+G ID +EA+ A+ LK K ++ +A A
Sbjct: 61 AVLGGFAEVENNEVTVLVNAAERGDKIDLEEARAAFSQADERLKGVKEDDRQGKFQATQA 120
Query: 119 LRRARTRVES 128
RRAR R+++
Sbjct: 121 YRRARARLQA 130
>sp|Q08808|ATPE_CYACA ATP SYNTHASE EPSILON CHAIN
pir||S36413 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - red alga
(Cyanidium caldarium)
pir||S70820 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - red alga
(Cyanidium caldarium) chloroplast
emb|CAA47242.1| (X66698) H(+)-transporting ATP synthase [Cyanidium caldarium]
Length = 138
Score = 125 bits (310), Expect = 3e-28
Identities = 59/133 (44%), Positives = 93/133 (69%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M LN+ V+ P+RIVW++ +E+IL T++GQ+GIL HAPL ALDIG++R+R+ + W ++
Sbjct: 1 MGLNIRVIAPDRIVWNAKAEEVILPTSTGQLGILSGHAPLLTALDIGVMRVRITNTWTSI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
L GGFA + N+EI +LVN AE+ S I+ +A + L + + L EAK ++ EA LR
Sbjct: 61 VLFGGFAEVENDEILILVNGAEEASVINLDKANKELIESSSLLNEAKTNKEKFEATQKLR 120
Query: 121 RARTRVESINMIS 133
+A+ RV++ N ++
Sbjct: 121 KAKARVQAANTLT 133
>pir||S75527 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Synechocystis sp. (strain PCC 6803)
dbj|BAA18088.1| (D90911) ATP synthase e subunit [Synechocystis sp.]
Length = 165
Score = 123 bits (306), Expect = 8e-28
Identities = 59/131 (45%), Positives = 92/131 (70%), Gaps = 3/131 (2%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTL + V+TP+++VWD +V+E+IL + +GQ+GIL NHAPL AL+IG++R+R W +
Sbjct: 30 MTLTVRVITPDKVVWDEEVQELILPSTTGQLGILSNHAPLLTALEIGVMRVRPGKDWQNI 89
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEA---KGKRQTIEANL 117
A+MGGFA + NNE+ VLVN AE G+ ID + A+Q A+ L+EA + K ++A+
Sbjct: 90 AVMGGFAEVENNEVKVLVNGAELGTTIDAESARQAYTAAQGALEEANRGEDKPNQLKASN 149
Query: 118 ALRRARTRVES 128
++AR R+++
Sbjct: 150 NYKKARARLQA 160
>sp|P26533|ATPE_SYNY3 ATP SYNTHASE EPSILON CHAIN
pir||S17754 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Synechocystis sp. (PCC 6803)
emb|CAA41138.1| (X58129) ATPase subunit epsilon [Synechocystis PCC6803]
Length = 136
Score = 123 bits (306), Expect = 8e-28
Identities = 59/131 (45%), Positives = 92/131 (70%), Gaps = 3/131 (2%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTL + V+TP+++VWD +V+E+IL + +GQ+GIL NHAPL AL+IG++R+R W +
Sbjct: 1 MTLTVRVITPDKVVWDEEVQELILPSTTGQLGILSNHAPLLTALEIGVMRVRPGKDWQNI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEA---KGKRQTIEANL 117
A+MGGFA + NNE+ VLVN AE G+ ID + A+Q A+ L+EA + K ++A+
Sbjct: 61 AVMGGFAEVENNEVKVLVNGAELGTTIDAESARQAYTAAQGALEEANRGEDKPNQLKASN 120
Query: 118 ALRRARTRVES 128
++AR R+++
Sbjct: 121 NYKKARARLQA 131
>sp|P50010|ATPE_PRODI ATP SYNTHASE EPSILON CHAIN
pir||B42697 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Prochloron didemni
gb|AAA25557.1| (M86384) ATP synthase epsilon subunit [Prochloron didemni]
Length = 136
Score = 122 bits (304), Expect = 1e-27
Identities = 60/131 (45%), Positives = 85/131 (64%), Gaps = 3/131 (2%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MTL L V+TP++ VWD V+EI+L + +GQVG+L HAPL ALD G++R+R W +
Sbjct: 1 MTLTLRVITPDKTVWDDSVEEIVLPSTTGQVGVLTGHAPLLTALDTGVMRVRPGKDWQAI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAK---GKRQTIEANL 117
ALMGGFA + NNE+ VLVN AE G ID + A+ + AE NL A +++ I+A
Sbjct: 61 ALMGGFAEVENNEVKVLVNGAEVGDSIDKETARTEFQQAEQNLARANQGDNRQELIQATQ 120
Query: 118 ALRRARTRVES 128
++AR R ++
Sbjct: 121 EFKKARARFQA 131
>sp|P07891|ATPE_CHLRE ATP SYNTHASE EPSILON CHAIN
pir||PWKME H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Chlamydomonas reinhardtii chloroplast
emb|CAA37928.1| (X53977) ATP synthase epsilon subunit [Chlamydomonas reinhardtii]
Length = 141
Score = 121 bits (300), Expect = 4e-27
Identities = 54/138 (39%), Positives = 91/138 (65%), Gaps = 6/138 (4%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIR------LN 54
M+L + +LTP R W+ EIIL T +G++G+L NHAP+ L++G + IR
Sbjct: 1 MSLQISILTPERPFWNGQADEIILPTETGEMGVLKNHAPIITGLNVGAMLIRGGQASGSK 60
Query: 55 DQWLTMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE 114
D+W + A+MGGFA + N++T+L N+A +I+P+EA+ E A+ANL++A+G ++ +E
Sbjct: 61 DEWNSYAIMGGFALVKQNQVTILANEAVSAENINPEEAKDAFETAKANLEKAEGVKEKVE 120
Query: 115 ANLALRRARTRVESINMI 132
AN A +RA+ R + + ++
Sbjct: 121 ANFAYKRAKARYQVVKVL 138
>sp|Q05375|ATPE_SYNP1 ATP SYNTHASE EPSILON CHAIN
pir||S36973 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Synechococcus sp
emb|CAA49883.1| (X70432) ATP synthase (epsilon) [Synechococcus sp.]
Length = 138
Score = 120 bits (298), Expect = 7e-27
Identities = 58/131 (44%), Positives = 90/131 (68%), Gaps = 3/131 (2%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M + + V+ P++ VWD+ +E+IL + +GQ+GIL NHAPL AL+ G++R+R +W+ +
Sbjct: 1 MVMTVRVIAPDKTVWDAPAEEVILPSTTGQLGILSNHAPLLTALETGVMRVRQEREWVAI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAK---GKRQTIEANL 117
ALMGGFA + NNE+TVLVN AE+G ID + A++ A+A + +A K+ I+A
Sbjct: 61 ALMGGFAEVENNEVTVLVNAAERGDTIDLETAKREFSEAQAAVAKAAQSGSKQAQIQAAQ 120
Query: 118 ALRRARTRVES 128
A RRAR R+++
Sbjct: 121 AFRRARARLQA 131
>gb|AAA84147.1| (M17168) CF1/CF0 ATPase epsilon subunit [Chlamydomonas reinhardtii]
prf||1314297A H ATPase epsilon [Chlamydomonas reinhardtii]
Length = 141
Score = 118 bits (293), Expect = 3e-26
Identities = 53/138 (38%), Positives = 90/138 (64%), Gaps = 6/138 (4%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIR------LN 54
M+L + +LTP R W+ EIIL T +G++G+L NHAP+ L++G + IR
Sbjct: 1 MSLQISILTPERPFWNGQADEIILPTETGEMGVLKNHAPIITGLNVGAMLIRGGQASGSK 60
Query: 55 DQWLTMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE 114
D+W + A+MGGFA + N++T+L N+A +I+P+EA+ E A+ANL++A+G ++ +
Sbjct: 61 DEWNSYAIMGGFALVKQNQVTILANEAVSAENINPEEAKDAFETAKANLEKAEGVKEKVV 120
Query: 115 ANLALRRARTRVESINMI 132
AN A +RA+ R + + ++
Sbjct: 121 ANFAYKRAKARYQVVKVL 138
>gi|11467761 CF1 epsilon subunit of ATP synthase [Nephroselmis olivacea]
gb|AAD54783.1|AF137379_6 (AF137379) CF1 epsilon subunit of ATP synthase [Nephroselmis
olivacea]
Length = 133
Score = 118 bits (292), Expect = 3e-26
Identities = 56/132 (42%), Positives = 87/132 (65%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M+L + +LTP ++ + EIIL TN+GQ+G+L NH PL A+DIG + +R W +M
Sbjct: 1 MSLQVRILTPEQVFLNVSADEIILPTNTGQMGVLTNHTPLITAIDIGPMLVRSESTWQSM 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
AL+GG A + +N++ +LVN+AE GSDI+ +EA+ T A+ L +K ++ IE NLA +
Sbjct: 61 ALLGGLALVKDNQVIILVNEAELGSDINAEEAETTFLAAKEALANSKTRKDQIENNLAFK 120
Query: 121 RARTRVESINMI 132
RAR R + ++
Sbjct: 121 RARVRYQVATLV 132
>sp|P06542|ATPE_ANASP ATP SYNTHASE EPSILON CHAIN
pir||B26926 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - Anabaena
sp
gb|AAA21994.1| (M15336) ATPase epsilon-subunit [Anabaena sp.]
Length = 137
Score = 114 bits (283), Expect = 4e-25
Identities = 58/132 (43%), Positives = 89/132 (66%), Gaps = 4/132 (3%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRL--NDQWL 58
MTL + V++P++ VWD++V E+IL + +GQ+GIL HAPL+ ALD G+LR+R + W
Sbjct: 1 MTLTVRVISPDKTVWDAEVDEVILPSTTGQLGILSGHAPLSTALDTGVLRVRTSKSQNWQ 60
Query: 59 TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEA-KGKRQT-IEAN 116
+AL+GGFA + +E+T+LVN E+G I+ +EA+ A+ L + G RQ I+AN
Sbjct: 61 AIALLGGFAEVEEDEVTILVNGGERGDTINLEEARTAYSQAQTKLNQVPAGDRQAQIQAN 120
Query: 117 LALRRARTRVES 128
A +RAR R ++
Sbjct: 121 QAFKRARARFQA 132
>emb|CAB53103.1| (AJ245645) ATP synthase CF1 epsilon chain [Prototheca wickerhamii]
Length = 134
Score = 111 bits (274), Expect = 4e-24
Identities = 52/132 (39%), Positives = 83/132 (62%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M L + ++ P+ I W++ +EIIL TN+GQ+GIL NHAPL ALDIG++ IR + +W+
Sbjct: 1 MILKILIMIPDGIFWNNKAEEIILPTNTGQIGILKNHAPLITALDIGVILIRTDKKWVPF 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
+MGGFA I N+IT+LVN AE + +++ + A L+ AK K+Q ++A +
Sbjct: 61 IIMGGFALIKQNKITILVNGAESAGTLKLVQSEAAFQEATNKLENAKSKKQYVDALFLFK 120
Query: 121 RARTRVESINMI 132
A+ R ++ +
Sbjct: 121 CAKARYQAAKQL 132
>emb|CAA67542.1| (X99079) subunit epsilon of ATPase [Ochrosphaera neapolitana]
Length = 104
Score = 106 bits (263), Expect = 9e-23
Identities = 45/97 (46%), Positives = 75/97 (76%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M+LN+ V+TP+R+VWD++ +E+IL +++GQ+GIL +HAPL ALDIG++R++ +W+++
Sbjct: 1 MSLNVRVITPDRVVWDANAEELILPSSTGQLGILTDHAPLLTALDIGVVRLKAEGKWISI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLE 97
L+ GFA + NN++T+L N AE+ + I+ AQ LE
Sbjct: 61 VLLEGFAEVENNKVTILCNGAEEAASINASTAQADLE 97
>gi|11467560 ATP synthase CF1 subunit epsilon [Odontella sinensis]
sp|P49648|ATPE_ODOSI ATP SYNTHASE EPSILON CHAIN
pir||S33354 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Odontella sinensis
pir||S78365 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Odontella sinensis chloroplast
emb|CAA51162.1| (X72497) ATPase [Odontella sinensis]
emb|CAA91738.1| (Z67753) ATP synthase CF1 subunit epsilon [Odontella sinensis]
Length = 133
Score = 106 bits (261), Expect = 1e-22
Identities = 54/133 (40%), Positives = 83/133 (61%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M +N+ VLTP R++ + E+IL +G VGIL HA L ALD G+LRI+LN++W +
Sbjct: 1 MVMNVRVLTPTRVICSTTADEVILPGLTGLVGILDGHAALITALDTGLLRIKLNEKWTPI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
L GG A I N +TVLVND E+ ++ EA LE A ++ A+ + ++A++ L+
Sbjct: 61 ILCGGLAEIDRNRVTVLVNDVEELVAVELNEATTELEKATLAVENAETSKARLDASIELK 120
Query: 121 RARTRVESINMIS 133
+A R+E +N +S
Sbjct: 121 KAVARLEGMNYLS 133
>gi|11467033 ATP Synthase, epsilon subunit [Euglena gracilis]
sp|P31477|ATPE_EUGGR ATP SYNTHASE EPSILON CHAIN
pir||S34546 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - Euglena
gracilis chloroplast
emb|CAA50127.1| (X70810) ATP Synthase, epsilon subunit [Euglena gracilis]
Length = 135
Score = 105 bits (259), Expect = 3e-22
Identities = 51/129 (39%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIR--LNDQWL 58
MTL++ ++ P R+ W+ V+EIIL T SGQ+G+L +H P+ LDIGI+ +R + W
Sbjct: 1 MTLDVSIIIPERVFWEKRVEEIILPTLSGQMGVLKDHIPILTGLDIGIILVRQKSSSDWT 60
Query: 59 TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLA 118
++ + GGFA I +N +T+LVN+AE GS+I+ ++AQ + ++ L+ K ++ E L
Sbjct: 61 SLVVTGGFALINSNNVTILVNEAEFGSEINVEQAQISYNSSKHALEMNKDIKRKFELTLN 120
Query: 119 LRRARTRVE 127
L++AR R +
Sbjct: 121 LKKARARFQ 129
>sp|P26534|ATPE_PYLLI ATP SYNTHASE EPSILON CHAIN
pir||PWPFEL H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - brown
alga (Pylaiella littoralis) chloroplast
emb|CAA42900.1| (X60329) epsilon subunit of AIPase [Pilayella littoralis]
Length = 132
Score = 99.8 bits (245), Expect = 1e-20
Identities = 48/132 (36%), Positives = 86/132 (64%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M+LN+ V+ P+ ++WD+ + ++L + +GQ+GIL HAPL +L+IGILRI+ N +W +
Sbjct: 1 MSLNIRVIAPDGLIWDTTAEGVVLPSLTGQLGILTGHAPLITSLEIGILRIKTNSKWTPI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
++GGFA I ++E+ VL++ E+ D +A+ L A+ +L AK ++ I+A+ L+
Sbjct: 61 IVLGGFAVIKDDEVLVLISGVEEVIKEDYSKAKSILAKAKIDLDSAKTTKEIIDASQELK 120
Query: 121 RARTRVESINMI 132
A +V++ I
Sbjct: 121 IASAKVKAFKFI 132
>gi|11467385 epsilon subunit of the F1 portion of ATP synthase [Cyanophora
paradoxa]
sp|P48083|ATPE_CYAPA ATP SYNTHASE EPSILON CHAIN
pir||T06930 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Cyanophora paradoxa cyanelle
gb|AAA81273.1| (U30821) epsilon subunit of the F1 portion of ATP synthase
[Cyanophora paradoxa]
Length = 132
Score = 97.9 bits (240), Expect = 4e-20
Identities = 46/129 (35%), Positives = 81/129 (62%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M+L++ V+ PN+++W + +E+IL + SG +GIL +HAPL AL+ G+++IR W ++
Sbjct: 1 MSLDVRVIAPNKVIWAKNAEEVILPSQSGMLGILTSHAPLYTALNTGVMKIRNETGWTSI 60
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
+MGGF + NE+ VLVN E +ID A++ +E A A+ ++ EA L+
Sbjct: 61 VVMGGFVEVEKNEVLVLVNAGEYVDEIDLSAAKKDVEKALETFNSAEAPKEKEEAAEFLK 120
Query: 121 RARTRVESI 129
A+ R++++
Sbjct: 121 YAQARLKAV 129
>dbj|BAA83614.1| (AB022018) F1F0-ATPase epsilon subunit [Desulfovibrio vulgaris]
Length = 134
Score = 87.0 bits (212), Expect = 8e-17
Identities = 47/125 (37%), Positives = 72/125 (57%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
+L+L ++TP+R+V V + G+ GILPNH P AL+IG L + + +
Sbjct: 4 SLHLEIVTPDRLVLSEKVDYVGAPGYEGEFGILPNHIPFLSALNIGSLYYKAGGKTHWIF 63
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
+ GGFA + +N++TVL AE+ DID + A++ E AE L +AK K + A AL+R
Sbjct: 64 VSGGFAEVSDNKVTVLAESAERAEDIDLERARKAKERAEQRLAQAKEKLDSARAQAALQR 123
Query: 122 ARTRV 126
A R+
Sbjct: 124 AMARM 128
>dbj|BAB07472.1| (AP001519) ATP synthase epsilon subunit [Bacillus halodurans]
Length = 133
Score = 84.7 bits (206), Expect = 4e-16
Identities = 46/127 (36%), Positives = 76/127 (59%), Gaps = 1/127 (0%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
TL++ V+TP+ V++ DV + + T G++GILP H PL L +G +R++ +A
Sbjct: 3 TLHVNVVTPDGKVYEGDVDMVSVKTVEGELGILPRHIPLVAPLTVGAVRLKKGSTVDLVA 62
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE-ANLALR 120
+ GGF + +++T+L AE SDID + A+ E AE L++AK + + A L+LR
Sbjct: 63 VSGGFVEVRPDQVTILAEAAELPSDIDVERARSAKERAEKRLQQAKQENIDFKRAELSLR 122
Query: 121 RARTRVE 127
RA R++
Sbjct: 123 RATNRLD 129
>dbj|BAA96810.1| (AB044942) FoF1-ATP synthase epsilon subunit [thermophilic
bacterium PS3]
Length = 133
Score = 81.9 bits (199), Expect = 3e-15
Identities = 43/130 (33%), Positives = 72/130 (55%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
T+++ V+TP+ V++ DV+ + + SG++GILP H PL L+I R++ + +A
Sbjct: 3 TIHVSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIPLVAPLEISAARLKKGGKTQYIA 62
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
+ GGF + +++T+L AE+ DID A+ E AE L+ + A LAL+R
Sbjct: 63 VSGGFLEVRPDKVTILAQAAERAEDIDVLRAKAAKERAERRLQSQQDDIDFKRAELALKR 122
Query: 122 ARTRVESINM 131
A R+ M
Sbjct: 123 AMNRLSVAEM 132
>gb|AAG48364.1|AF330160_11 (AF330160) ATP synthase epsilon subunit [Bacillus pseudofirmus]
Length = 133
Score = 80.0 bits (194), Expect = 1e-14
Identities = 44/127 (34%), Positives = 72/127 (56%), Gaps = 1/127 (0%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
T+ + V+TP+ V+D DV +++ T G++GILP H PL L +G +R++ + +A
Sbjct: 3 TIRVNVVTPDGKVYDGDVDMVVVRTVEGELGILPKHIPLVAPLTVGAVRLKKGNSEEQVA 62
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE-ANLALR 120
+ GGF + +++T+L AE S ID A+ E AE+ L K + A LAL+
Sbjct: 63 VSGGFVEVRPDQVTILAEAAELPSAIDVDRARAAKERAESRLNSTKQDAVDFKRAELALK 122
Query: 121 RARTRVE 127
RA R++
Sbjct: 123 RAINRLD 129
>gb|AAB51467.1| (U64318) ATP synthase subunit epsilon [Moorella thermoacetica]
Length = 134
Score = 79.6 bits (193), Expect = 1e-14
Identities = 44/132 (33%), Positives = 72/132 (54%), Gaps = 1/132 (0%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLT-M 60
+LNL ++TP R+V ++ +I G +G+LP HAPL L G++ R ++ +
Sbjct: 3 SLNLEIITPERVVLQAEAASVIAPGIQGYLGVLPEHAPLITPLQAGVVTCRRRERAEERV 62
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
A+ GGF G +++ +L + AE+ +ID + A+Q E AE L+E A ALR
Sbjct: 63 AVSGGFLEAGPDQVIILADTAERSEEIDVEWARQARERAERRLRERPPGLDVARAEAALR 122
Query: 121 RARTRVESINMI 132
RA R+++ I
Sbjct: 123 RAVARLKAAGAI 134
>sp|P43453|ATPE_ENTHR ATP SYNTHASE EPSILON CHAIN
gb|AAA26860.1| (M90060) H+ ATPase [Enterococcus faecalis]
Length = 140
Score = 79.2 bits (192), Expect = 2e-14
Identities = 44/133 (33%), Positives = 76/133 (57%), Gaps = 10/133 (7%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLND-----QW 57
L + V+TP+ +V+D ++ T +G++GILP HAP+ + L I +R++ D W
Sbjct: 5 LTVNVVTPDGLVYDHHAAIVVARTTAGEIGILPKHAPIIVPLTIDEVRVKRTDSDTHVDW 64
Query: 58 LTMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE--- 114
+ A+ GG + +N ++++ + AE+ DID A++ + AE + EAK K T E
Sbjct: 65 I--AVNGGIMEVRDNVVSIVADSAERERDIDVSRAERAKQRAERQIAEAKEKEDTNELKR 122
Query: 115 ANLALRRARTRVE 127
A +AL RA R++
Sbjct: 123 ATVALHRAINRIK 135
>sp|P37812|ATPE_BACSU ATP SYNTHASE EPSILON CHAIN
pir||I40369 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain (atpC) -
Bacillus subtilis
emb|CAA82261.1| (Z28592) ATP synthase subunit epsilon [Bacillus subtilis]
emb|CAB15697.1| (Z99122) ATP synthase (subunit epsilon) [Bacillus subtilis]
Length = 132
Score = 78.0 bits (189), Expect = 4e-14
Identities = 39/126 (30%), Positives = 68/126 (53%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
T+ + ++TP+ V+D+D++ + + SG +GILP H P L IG +R++ + Q +A
Sbjct: 3 TVKVNIVTPDGPVYDADIEMVSVRAESGDLGILPGHIPTVAPLKIGAVRLKKDGQTEMVA 62
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
+ GGF + + +T+L AE ID + A+ + A+ L A LAL+R
Sbjct: 63 VSGGFVEVRPDHVTILAQAAETAEGIDKERAEAARQRAQERLNSQSDDTDIRRAELALQR 122
Query: 122 ARTRVE 127
A R++
Sbjct: 123 ALNRLD 128
>sp|P12699|ATPE_BACME ATP SYNTHASE EPSILON CHAIN
pir||PWBSEM H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - Bacillus
megaterium
gb|AAA82527.1| (M20255) ATP synthase epsilon subunit [Bacillus megaterium]
Length = 134
Score = 74.1 bits (179), Expect = 6e-13
Identities = 38/126 (30%), Positives = 70/126 (55%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
T+++ V+TP+ V++S+V+ + SG++GIL H P+ L IG +R++ +A
Sbjct: 3 TIHVSVVTPDGPVYESEVEMVSTRAQSGELGILHGHIPMVAPLQIGAVRLKKASSTELVA 62
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
+ GGF + +++T+L AE +ID A++ + AE L + A +AL+R
Sbjct: 63 VSGGFLEVRPDKVTILAQAAETAEEIDVARAEEAKKRAEMRLDSKQDDVDVKRAEIALKR 122
Query: 122 ARTRVE 127
A R++
Sbjct: 123 AVNRLD 128
>sp|P22480|ATPE_BACFI ATP SYNTHASE EPSILON CHAIN
pir||S17727 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - Bacillus
firmus
Length = 133
Score = 72.6 bits (175), Expect = 2e-12
Identities = 41/127 (32%), Positives = 70/127 (54%), Gaps = 1/127 (0%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
T+ + V+TP+ V+D DV +++ T G++GI H PL + +G +R++ + +A
Sbjct: 3 TIRVNVVTPDGKVYDGDVDLVVVRTVEGELGIFRKHIPLVAPVTVGRVRLKKGNSEEQVA 62
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE-ANLALR 120
+ GGF + +++T+L AE S ID A+ E AE+ L K + A LAL+
Sbjct: 63 VSGGFVEVRADQVTILAEAAELPSAIDVDRARAAKERAESRLNSTKQDAVDFKRAELALK 122
Query: 121 RARTRVE 127
RA R++
Sbjct: 123 RAINRLD 129
>sp|P07678|ATPE_BACP3 ATP SYNTHASE EPSILON CHAIN
pir||S02256 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
thermophilic bacterium PS-3
emb|CAA27607.1| (X03969) ATPase epsilon subunit (aa 1-132) [thermophilic bacterium
PS3]
emb|CAA30656.1| (X07804) TF1-epsilon subunit (AA 1 - 132) [thermophilic bacterium
PS3]
Length = 132
Score = 72.2 bits (174), Expect = 2e-12
Identities = 40/130 (30%), Positives = 69/130 (52%), Gaps = 1/130 (0%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
T+++ V+TP+ V++ DV+ + + SG++GILP H PL L+I R++ + +A
Sbjct: 3 TIHVSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIPLVAPLEISAARLKKGGKTQYIA 62
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
+ GGF + + +T+L AE+ DID A + + L+ + A LAL+R
Sbjct: 63 VSGGFLEVRPDNVTILAQAAERAEDIDVLRA-KARKSGRTPLQSQQDDIDFKRAELALKR 121
Query: 122 ARTRVESINM 131
A R+ M
Sbjct: 122 AMNRLSVAEM 131
>sp|P42009|ATPE_BACST ATP SYNTHASE EPSILON CHAIN
dbj|BAA07256.1| (D38060) ATPase subunit epsilon [Bacillus stearothermophilus]
Length = 132
Score = 71.8 bits (173), Expect = 3e-12
Identities = 40/130 (30%), Positives = 68/130 (51%), Gaps = 1/130 (0%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
T+++ V+TP+ V++ DV+ + + SG++GILP H PL L+I R++ + +A
Sbjct: 3 TIHVSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIPLVAPLEISAARLKKGGKTQYIA 62
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
GGF + + +T+L AE+ DID A + + L+ + A LAL+R
Sbjct: 63 FSGGFLEVRPDNVTILAQAAERAEDIDVLRA-KARKSGRTPLQSQQDDIDFKRAELALKR 121
Query: 122 ARTRVESINM 131
A R+ M
Sbjct: 122 AMNRLSVAEM 131
>sp|P41012|ATPE_BACCA ATP SYNTHASE EPSILON CHAIN
dbj|BAA07249.1| (D38058) ATPase subunit epsilon [Bacillus caldotenax]
Length = 132
Score = 69.1 bits (166), Expect = 2e-11
Identities = 39/130 (30%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
T+++ V+TP+ V++ DV+ + + SG++GILP H L L+I R++ + +A
Sbjct: 3 TIHVSVVTPDGPVYEDDVEMVSVKAKSGELGILPGHIRLVAPLEISAARLKKGGKTQYIA 62
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
+ GGF + +++T+L AE+ DID A + + L+ + A LAL+R
Sbjct: 63 VSGGFLEVRPDKVTILAQAAERAEDIDVLRA-KARKSGRTPLQSQQDDIDFKRAELALKR 121
Query: 122 ARTRVESINM 131
A R+ M
Sbjct: 122 AMNRLSVAEM 131
>sp|P95790|ATPE_STRMU ATP SYNTHASE EPSILON CHAIN
pir||JC5742 membrane-bound proton-translocating ATPase (EC 3.6.1.-) epsilon
chain - Streptococcus mutans
gb|AAD13384.1| (U31170) ATPase, epsilon subunit [Streptococcus mutans]
Length = 138
Score = 68.7 bits (165), Expect = 3e-11
Identities = 41/128 (32%), Positives = 74/128 (57%), Gaps = 10/128 (7%)
Query: 7 VLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQ-----WLTMA 61
++TP+ + +D K I++ T +G++G+L NH L L++ ++I+ D W+ A
Sbjct: 8 IVTPDGLKYDHHAKFILVKTPNGELGVLANHENLIAPLEVHEMKIKRIDDDSHVDWV--A 65
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE---ANLA 118
+ GG I +N +T++ + AE+ DID A++ + AE ++EAK + + E A +A
Sbjct: 66 VNGGIIEIKDNLVTIVADSAERERDIDLSRAERAKKRAEKAIEEAKEQHRIDEVQRAQVA 125
Query: 119 LRRARTRV 126
LRRA R+
Sbjct: 126 LRRALNRI 133
>gb|AAD00919.1| (AF001955) proton-translocating ATPase epsilon subunit
[Streptococcus sanguinis]
Length = 139
Score = 66.7 bits (160), Expect = 1e-10
Identities = 39/128 (30%), Positives = 68/128 (52%), Gaps = 10/128 (7%)
Query: 7 VLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQ-----WLTMA 61
++TP+ +++D + + T G++GILP H L++ +++R D W+ A
Sbjct: 8 IVTPDGLIYDHHAAFVSVKTIDGELGILPRHINTIAVLEVDQVKVRRVDDDKHIDWI--A 65
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKR---QTIEANLA 118
+ GG I +N IT++ + AE+ DID A++ AE ++EA K Q A +A
Sbjct: 66 VNGGIIEIADNVITIVADSAERARDIDISRAERAKRRAELEIEEAHDKHLIDQERRAKIA 125
Query: 119 LRRARTRV 126
L+RA R+
Sbjct: 126 LQRAINRI 133
>dbj|BAA23689.1| (AB006151) proton-translocating ATPase, epsiron subunit
[Ruminococcus albus]
Length = 134
Score = 66.3 bits (159), Expect = 1e-10
Identities = 39/127 (30%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
Query: 5 LCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMG 64
L VLTP +I ++ D +++I T SG VGIL HAP ++ ++IR + + + A+
Sbjct: 6 LRVLTPEKIFFEGDAEQLIAKTTSGYVGILKGHAPYVASIVPSEMKIRSDGSFRSAAISD 65
Query: 65 GFARIGNNE-ITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRRAR 123
G ++ + +TVL + E +ID A+++ AE LK + + A L+RA
Sbjct: 66 GIVKVSEDSMVTVLTSAIEWSDEIDVARAERSKARAEKQLKAETSRTEFDLAERQLKRAV 125
Query: 124 TRVESIN 130
R+ N
Sbjct: 126 NRISVAN 132
>pir||D81970 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain NMA0520
[imported] - Neisseria meningitidis (group A strain
Z2491)
emb|CAB83812.1| (AL162753) ATP synthase epsilon chain [Neisseria meningitidis
Z2491]
Length = 140
Score = 65.6 bits (157), Expect = 2e-10
Identities = 33/128 (25%), Positives = 74/128 (57%), Gaps = 2/128 (1%)
Query: 7 VLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRL--NDQWLTMALMG 64
V++ + ++ + I++ T G++GI P H P+ + +G LR+ + D+ + +A+ G
Sbjct: 8 VVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSLVRLGALRLTVLGEDKEVLVAVSG 67
Query: 65 GFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRRART 124
G + +++TVL + A + +++D A++ + AEA + +AK + EA+ AL A
Sbjct: 68 GVLEVQPDKVTVLADVAVRSAEMDQARAEEAKKAAEAGISQAKDDKALAEAHKALAAAIA 127
Query: 125 RVESINMI 132
++++++ I
Sbjct: 128 QLKTLDYI 135
>gb|AAK05861.1|AE006406_5 (AE006406) ATP synthase epsilon subunit (EC 3.6.1.34) [Lactococcus
lactis subsp. lactis]
Length = 141
Score = 64.8 bits (155), Expect = 4e-10
Identities = 41/130 (31%), Positives = 70/130 (53%), Gaps = 6/130 (4%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWL---T 59
+ L V+TP +++D I T +G++GILPN L+I L++R D
Sbjct: 6 MTLQVITPAGMIYDHHANYITARTTNGEIGILPNMISTIAGLEIDELKVRRPDDETHVDY 65
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEAN--- 116
+A+ GG I ++ +T++ + AE+ DID A++ AE L+ AK ++++ E N
Sbjct: 66 IAVNGGIIEIKDSLVTIVADSAERNRDIDVSRAERAKIRAEKALEVAKAEKKSDEINRAE 125
Query: 117 LALRRARTRV 126
+AL RA R+
Sbjct: 126 VALHRALNRL 135
>sp|P29709|ATPE_PROMO ATP SYNTHASE EPSILON CHAIN, SODIUM ION SPECIFIC
pir||S29042 Na+-transporting ATP synthase (EC 3.6.1.-) epsilon chain -
Propionigenium modestum
emb|CAA41375.1| (X58461) F1 subunit [Propionigenium modestum]
Length = 137
Score = 64.4 bits (154), Expect = 5e-10
Identities = 36/125 (28%), Positives = 65/125 (51%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
T L V+TP + V D D + +I+ T G +G++ +HAP L +G ++I+ +
Sbjct: 3 TFKLEVVTPLKKVLDRDAEMVIMRTIEGDMGVMADHAPFVAELAVGEMKIKSANGEEAYF 62
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
+ GGF I + +L ++A +ID + A++ EIA+ L + K + +L+
Sbjct: 63 VSGGFLEISKEKTMILADEAIDVKEIDVERAKREAEIAKETLVKLKEDKDIAVTQKSLQE 122
Query: 122 ARTRV 126
A T+V
Sbjct: 123 ALTKV 127
>sp|P50011|ATPE_STRLI ATP SYNTHASE EPSILON CHAIN
pir||S37548 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Streptomyces lividans
emb|CAA80328.1| (Z22606) H(+)-transporting ATP synthase [Streptomyces lividans]
emb|CAB94545.1| (AL359152) ATP synthase epsilon chain [Streptomyces coelicolor
A3(2)]
Length = 124
Score = 64.0 bits (153), Expect = 7e-10
Identities = 38/124 (30%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMAL 62
L++ ++ +R VW + ++ T SG +G++P H PL L+ G + IR +D +A
Sbjct: 5 LHVALVAADREVWSGEATLVVARTTSGDIGVMPGHQPLLGVLESGPVTIRTSDGGTVVAA 64
Query: 63 M-GGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
+ GGF +N++++L AE +ID A++ LE A+ +A +R+ A++ LR
Sbjct: 65 VHGGFISFADNKLSLLAEVAELSDEIDVHRAERKLEQAKTE-GDAHAERR---ADVRLRA 120
Query: 122 ARTR 125
A R
Sbjct: 121 AAGR 124
>dbj|BAA23756.1| (AB009314) proton-translocating ATPase, epsiron subunit
[Streptococcus bovis]
Length = 138
Score = 63.6 bits (152), Expect = 9e-10
Identities = 42/128 (32%), Positives = 66/128 (50%), Gaps = 10/128 (7%)
Query: 7 VLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQ-----WLTMA 61
V+TP+ I +D I + T G++GILP H L L + ++I D W+ A
Sbjct: 8 VVTPDGIRYDHHANFISVKTPDGEMGILPEHINLIAPLTVHEMKIHRTDDPNHVDWV--A 65
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE---ANLA 118
+ GG I +N +T++ + AE+ DID A++ AE L++A+ E A +A
Sbjct: 66 INGGIIEIKDNLVTIVADSAERERDIDVSRAERAKIRAERKLEQAQSTHDIDEVRRAQVA 125
Query: 119 LRRARTRV 126
LRRA R+
Sbjct: 126 LRRALNRI 133
>sp|P43718|ATPE_HAEIN ATP SYNTHASE EPSILON CHAIN
pir||C64071 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Haemophilus influenzae (strain Rd KW20)
gb|AAC22136.1| (U32730) ATP synthase F1, subunit epsilon (atpC) [Haemophilus
influenzae Rd]
Length = 142
Score = 63.6 bits (152), Expect = 9e-10
Identities = 33/103 (32%), Positives = 59/103 (57%), Gaps = 1/103 (0%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLND-QWLTM 60
T NL +++ + +++ +VK+I ++ G++GILP H PL A+ GI++ L D +
Sbjct: 3 TFNLTIVSAEQKIFEGEVKQIQVTGVEGELGILPGHTPLLTAIKPGIVKFTLKDGNEEVI 62
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANL 103
+ GGF + N +TVL + A +GS++D + AE N+
Sbjct: 63 YVSGGFLEVQPNIVTVLADIAIRGSELDADRIHEAKRKAEENI 105
>gb|AAF22499.1|AF098522_9 (AF098522) F1F0-ATPase subunit epsilon [Lactobacillus acidophilus]
Length = 146
Score = 62.8 bits (150), Expect = 2e-09
Identities = 39/131 (29%), Positives = 67/131 (50%), Gaps = 7/131 (5%)
Query: 7 VLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLT----MAL 62
V+TPN +++ + + G+ IL NH P+ L I ++++ + + + +A+
Sbjct: 12 VVTPNGMIYSHRGSIVDVRAIDGERSILYNHIPILTPLAISEVKVKRSREMGSRIDHIAI 71
Query: 63 MGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGK---RQTIEANLAL 119
GG+ NN T++ + AE+ +ID AQ E AE L+EA+ K R A +AL
Sbjct: 72 SGGYIEFSNNVATIVADSAERARNIDVSRAQAAKERAEKRLREAREKHDERNLERAQVAL 131
Query: 120 RRARTRVESIN 130
+RA R+ N
Sbjct: 132 KRAMNRISVYN 142
>gb|AAD16427.1| (AF101055) ATP synthase subunit epsilon [Clostridium
acetobutylicum]
Length = 133
Score = 62.1 bits (148), Expect = 3e-09
Identities = 39/127 (30%), Positives = 63/127 (48%), Gaps = 4/127 (3%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPL-AMALDIGILRIRLNDQWLTMA 61
+ L +LTP + + DVKEII T G++GILPNH L A + + + +
Sbjct: 5 IKLSILTPQKTFYVGDVKEIITRTVEGEIGILPNHTDLVAFLTPTETILVEEDGSRKKVF 64
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKG---KRQTIEANLA 118
G +G +E++ + + +E +ID Q A+ E AE LK + KR + + A
Sbjct: 65 TSTGILNVGESEVSFMCDASEWPDEIDIQRAETAKERAEKRLKTSNNIDVKRAELSLSRA 124
Query: 119 LRRARTR 125
L R +T+
Sbjct: 125 LARIKTK 131
>pir||F81024 ATP synthase F1, epsilon chain NMB1933 [imported] - Neisseria
meningitidis (group B strain MD58)
gb|AAF42262.1| (AE002542) ATP synthase F1, epsilon subunit [Neisseria meningitidis
MC58]
Length = 140
Score = 61.7 bits (147), Expect = 3e-09
Identities = 32/128 (25%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 7 VLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRL--NDQWLTMALMG 64
V++ + ++ + I++ T G++GI P H P+ + G LR+ + D+ + +A+ G
Sbjct: 8 VVSSEQKIYSGEATFIVVPTVQGELGIYPRHEPIMSLVRPGALRLTVPGEDKEVLVAVSG 67
Query: 65 GFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRRART 124
G + +++TVL + A + +++D A++ + AEA + +AK + EA+ L A
Sbjct: 68 GVLEVQPDKVTVLADVAVRSAEMDRARAEEAKKAAEAGISQAKDDKALAEAHKVLAAAIA 127
Query: 125 RVESINMI 132
++++++ I
Sbjct: 128 QLKTLDYI 135
>gb|AAF02208.1|AF059739_8 (AF059739) H+-ATPase cytoplasmic F1-part epsilon-subunit
[Lactococcus lactis subsp. cremoris]
Length = 141
Score = 61.7 bits (147), Expect = 3e-09
Identities = 40/130 (30%), Positives = 68/130 (51%), Gaps = 6/130 (4%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWL---T 59
+ L V+TP +V+D I T +G++GILPN L+I L++ D
Sbjct: 6 MTLQVITPAGVVYDHHANYITARTTNGEIGILPNMISTITGLEIDELKVSRPDDETHVDY 65
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE---AN 116
+A+ GG I ++ +T++ + AE+ DID A++ AE L+ AK ++++ E
Sbjct: 66 IAVNGGIIEIKDSLVTIVADSAERNRDIDVSRAERAKIRAEKALEVAKAEKKSDEIKRVE 125
Query: 117 LALRRARTRV 126
+AL RA R+
Sbjct: 126 VALHRALNRL 135
>sp|P50009|ATPE_ACEWO ATP SYNTHASE EPSILON CHAIN, SODIUM ION SPECIFIC
(NA(+)-TRANSLOCATING ATPASE EPSILON CHAIN)
pir||I39749 Na+-transporting ATP synthase (EC 3.6.1.-) epsilon chain -
Acetobacterium woodii
gb|AAA79909.1| (U10505) F1FO ATPase epsilon subunit [Acetobacterium woodii]
prf||2113197C Na ATPase:SUBUNIT=epsilon [Acetobacterium woodii]
Length = 133
Score = 60.5 bits (144), Expect = 8e-09
Identities = 39/128 (30%), Positives = 61/128 (47%), Gaps = 3/128 (2%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLND-QWLTM 60
T L ++ P + +D D++ +++ G++ IL H PL + IG I D +
Sbjct: 4 TFRLKIIAPTGVFFDDDIERVVIRGIEGELAILAEHTPLTTNVAIGTFNIIFADKKKKNG 63
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
L+GG A I E +L + AE +ID + AQ+ E A + + K T A AL
Sbjct: 64 TLLGGIATINPRETIILTDAAEWPEEIDIKRAQEAKERALKRIHD--DKFDTARARAALE 121
Query: 121 RARTRVES 128
RA R+ S
Sbjct: 122 RAIARINS 129
>pdb|1BSH|A Chain A, Solution Structure Of The Epsilon Subunit Of The F1-
Atpsynthase From Escherichia Coli And Orientation Of The
Subunit Relative To The Beta Subunits Of The Complex
pdb|1BSN|A Chain A, Solution Structure Of The Epsilon Subunit Of The F1-
Atpsynthase From Escherichia Coli And Orientation Of The
Subunit Relative To The Beta Subunits Of The Complex
Length = 138
Score = 60.1 bits (143), Expect = 1e-08
Identities = 36/132 (27%), Positives = 70/132 (52%), Gaps = 1/132 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI-RLNDQWLT 59
MT +L V++ + ++ V++I ++ + G++GI P HAPL A+ G++RI + +
Sbjct: 2 MTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEF 61
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ L GG + +TVL + A +G D+D A + AE ++ + G +A+ L
Sbjct: 62 IYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAEL 121
Query: 120 RRARTRVESINM 131
+A ++ I +
Sbjct: 122 AKAIAQLRVIEL 133
>gb|AAF19363.1|AF188265_9 (AF188265) ATP synthase subunit epsilon [Salmonella typhimurium]
Length = 137
Score = 60.1 bits (143), Expect = 1e-08
Identities = 36/132 (27%), Positives = 70/132 (52%), Gaps = 1/132 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI-RLNDQWLT 59
MT +L V++ + ++ V++I ++ + G++GI P HAPL A+ G++RI + +
Sbjct: 1 MTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEF 60
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ L GG + +TVL + A +G D+D A + AE ++ + G +A+ L
Sbjct: 61 IYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAEL 120
Query: 120 RRARTRVESINM 131
+A ++ I +
Sbjct: 121 AKAIAQLRVIEL 132
>sp|P00832|ATPE_ECOLI ATP SYNTHASE EPSILON CHAIN
pir||PWECE H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Escherichia coli
emb|CAA23595.1| (V00311) reading frame papG [Escherichia coli]
emb|CAA25783.1| (X01631) uncC protein [Escherichia coli]
gb|AAA83876.1| (M25464) H+ ATPase F1 epsilon subunit [Escherichia coli]
gb|AAA24738.1| (J01594) ATP synthase epsilon subunit (atp-9) [Escherichia coli]
gb|AAA62083.1| (L10328) ATP synthase F1 epsilon subunit [Escherichia coli]
gb|AAC76754.1| (AE000450) membrane-bound ATP synthase, F1 sector, epsilon-subunit
[Escherichia coli K12]
Length = 139
Score = 60.1 bits (143), Expect = 1e-08
Identities = 36/132 (27%), Positives = 70/132 (52%), Gaps = 1/132 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI-RLNDQWLT 59
MT +L V++ + ++ V++I ++ + G++GI P HAPL A+ G++RI + +
Sbjct: 3 MTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEF 62
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ L GG + +TVL + A +G D+D A + AE ++ + G +A+ L
Sbjct: 63 IYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAEL 122
Query: 120 RRARTRVESINM 131
+A ++ I +
Sbjct: 123 AKAIAQLRVIEL 134
>sp|P30159|ATPE_DICDH ATP SYNTHASE EPSILON CHAIN
pir||S22510 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - brown
alga (Dictyota dichotoma) chloroplast
emb|CAA47371.1| (X66939) atpE [Dictyota dichotoma]
Length = 139
Score = 60.1 bits (143), Expect = 1e-08
Identities = 35/138 (25%), Positives = 74/138 (53%), Gaps = 5/138 (3%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
M++N+ ++TP +W++ +EI+L + + + +LP H + L G+LR++++ +W +
Sbjct: 1 MSINIRIVTPTGFLWETKAEEILLPSTTAPLIVLPGHINILTGLSPGLLRVKVDSRWKPI 60
Query: 61 ALMGGFARI---GNNEITVLVNDAEKGSDIDPQEAQQTLEIAE--ANLKEAKGKRQTIEA 115
+ G A+I + + V + + E+ + +EA+ LE A N+ R+ I+A
Sbjct: 61 LISSGAAQILTSDSTNVDVGIMEVEEIKQENFKEAELLLEKANDALNIINPIDIRERIKA 120
Query: 116 NLALRRARTRVESINMIS 133
A A +RVE+ ++
Sbjct: 121 GEAKSFAESRVEAFKFLA 138
>gb|AAG58934.1|AE005605_2 (AE005605) membrane-bound ATP synthase, F1 sector, epsilon-subunit
[Escherichia coli O157:H7]
Length = 139
Score = 59.7 bits (142), Expect = 1e-08
Identities = 36/132 (27%), Positives = 70/132 (52%), Gaps = 1/132 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI-RLNDQWLT 59
MT +L V++ + ++ V++I ++ + G++GI P HAPL A+ G++RI + +
Sbjct: 3 MTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEF 62
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ L GG + +TVL + A +G D+D A + AE ++ + G +A+ L
Sbjct: 63 IYLSGGILEVQLGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAEL 122
Query: 120 RRARTRVESINM 131
+A ++ I +
Sbjct: 123 AKAIAQLRVIEL 134
>emb|CAA23528.1| (V00267) reading frame epsilon [Escherichia coli]
Length = 133
Score = 58.9 bits (140), Expect = 2e-08
Identities = 35/123 (28%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI-RLNDQWLT 59
MT +L V++ + ++ V++I ++ + G++GI P HAPL A+ G++RI + +
Sbjct: 3 MTYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEF 62
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ L GG + +TVL + A +G D+D A + AE ++ + G +A+ L
Sbjct: 63 IYLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAEL 122
Query: 120 RRA 122
+A
Sbjct: 123 AKA 125
>pdb|1AQT| Epsilon Subunit Of F1f0-Atp Synthase From Escherichia Coli
pdb|1QO1|J Chain J, Molecular Architecture Of The Rotary Motor In Atp Synthase
From Yeast Mitochondria
Length = 138
Score = 58.2 bits (138), Expect = 4e-08
Identities = 35/131 (26%), Positives = 69/131 (51%), Gaps = 1/131 (0%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI-RLNDQWLTM 60
T +L V++ + ++ V++I ++ + G++GI P HAPL A+ G++RI + + +
Sbjct: 3 TYHLDVVSAEQQMFSGLVEKIQVTGSEGELGIYPGHAPLLTAIKPGMIRIVKQHGHEEFI 62
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
L GG + +TVL + A +G D+D A + AE ++ + G +A+ L
Sbjct: 63 YLSGGILEVQPGNVTVLADTAIRGQDLDEARAMEAKRKAEEHISSSHGDVDYAQASAELA 122
Query: 121 RARTRVESINM 131
+A ++ I +
Sbjct: 123 KAIAQLRVIEL 133
>sp|Q10595|ATPE_MYCTU ATP SYNTHASE EPSILON CHAIN
pir||C70775 probable atpC protein - Mycobacterium tuberculosis (strain H37RV)
emb|CAA97744.1| (Z73419) atpC [Mycobacterium tuberculosis]
Length = 121
Score = 57.0 bits (135), Expect = 9e-08
Identities = 32/97 (32%), Positives = 54/97 (54%), Gaps = 2/97 (2%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPL-AMALDIGILRI-RLNDQWLTM 60
LN+ ++ +R +W K + T G++GILP H PL A +D ++R+ R ++ L +
Sbjct: 4 LNVEIVAVDRNIWSGTAKFLFTRTTVGEIGILPRHIPLVAQLVDDAMVRVEREGEKDLRI 63
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLE 97
A+ GGF + +++L AE S+ID A+Q E
Sbjct: 64 AVDGGFLSVTEEGVSILAESAEFESEIDEAAAKQDSE 100
>emb|CAC31527.1| (AL583920) ATP synthase [epsilon] chain [Mycobacterium leprae]
Length = 121
Score = 56.6 bits (134), Expect = 1e-07
Identities = 31/97 (31%), Positives = 54/97 (54%), Gaps = 2/97 (2%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPL-AMALDIGILRI-RLNDQWLTM 60
LN+ ++ +R +W + T +G++GILP H P+ A +D ++RI R ++ L +
Sbjct: 4 LNIEIVAVDRKIWSGKGTFLFTRTTAGEIGILPRHIPMVAQLVDDNMVRIEREGEKDLRV 63
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLE 97
A+ GGF + +++L AE S+ID A+Q E
Sbjct: 64 AVDGGFLSVTEERVSILAESAEFDSEIDENAAKQDAE 100
>sp|P45822|ATPE_MYCLE ATP SYNTHASE EPSILON CHAIN
pir||T09973 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Mycobacterium leprae
gb|AAA63105.1| (U15186) ATP synthase epsilon chain [Mycobacterium leprae]
Length = 124
Score = 56.6 bits (134), Expect = 1e-07
Identities = 31/97 (31%), Positives = 54/97 (54%), Gaps = 2/97 (2%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPL-AMALDIGILRI-RLNDQWLTM 60
LN+ ++ +R +W + T +G++GILP H P+ A +D ++RI R ++ L +
Sbjct: 7 LNIEIVAVDRKIWSGKGTFLFTRTTAGEIGILPRHIPMVAQLVDDNMVRIEREGEKDLRV 66
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLE 97
A+ GGF + +++L AE S+ID A+Q E
Sbjct: 67 AVDGGFLSVTEERVSILAESAEFDSEIDENAAKQDAE 103
>sp|P41171|ATPE_THIFE ATP SYNTHASE EPSILON CHAIN
gb|AAA53128.1| (M81087) F1F0-ATPase epsilon subunit [Acidithiobacillus
ferrooxidans]
Length = 141
Score = 56.6 bits (134), Expect = 1e-07
Identities = 35/132 (26%), Positives = 64/132 (47%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTM 60
MT+++ V++ ++ ++ G++GILP HAPL L G LRI + +
Sbjct: 3 MTIDVRVVSAEGSIYAGVADMVVAPGEMGELGILPRHAPLLTGLRPGELRIIHGAETEYL 62
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
+ GG I + +TVL + AE+ +DID +A + AEA + + + A L
Sbjct: 63 FVNGGILEIQPDMVTVLADSAERATDIDEAKALAAKQAAEARMAGHTDQMEYAAAQAELL 122
Query: 121 RARTRVESINMI 132
R++++ +
Sbjct: 123 EQIARLKTVQRL 134
>gb|AAK03579.1| (AE006185) AtpC [Pasteurella multocida]
Length = 142
Score = 55.0 bits (130), Expect = 3e-07
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 1/106 (0%)
Query: 4 NLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLND-QWLTMAL 62
NL V++ + ++ V+ I + G++GIL H PL A+ GI+++ L D + + +
Sbjct: 5 NLTVVSAEQQIFSGQVESIQATGIEGELGILAGHTPLLTAIKPGIVKLTLEDGKEEVIYV 64
Query: 63 MGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKG 108
GGF + N +TVL + A +G ++D + AE N++ G
Sbjct: 65 SGGFLEVQPNVVTVLADTAIRGDELDGDRILAAKKRAEENIRTRHG 110
>pir||C72231 ATP synthase F1, subunit epsilon - Thermotoga maritima (strain
MSB8)
gb|AAD36676.1|AE001805_1 (AE001805) ATP synthase F1, subunit epsilon [Thermotoga maritima]
Length = 108
Score = 51.9 bits (122), Expect = 3e-06
Identities = 26/94 (27%), Positives = 45/94 (47%)
Query: 7 VLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMGGF 66
++TP IV+D + I T G +GILP AP+ L + ++I+ D + + GGF
Sbjct: 5 IVTPYGIVYDRESDFISFRTVEGSMGILPRRAPIVTQLSVCDVKIKSGDDEYHLKVAGGF 64
Query: 67 ARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAE 100
++ ++ +A + DI P + E E
Sbjct: 65 LLCDGKDVIIITEEAGREEDISPDRFMEARERVE 98
>sp|Q9ZK82|ATPE_HELPJ ATP SYNTHASE EPSILON CHAIN
pir||C71855 ATP synthase F1, chain epsilon - Helicobacter pylori (strain J99)
gb|AAD06638.1| (AE001533) ATP synthase F1, subunit epsilon [Helicobacter pylori
J99]
Length = 123
Score = 51.5 bits (121), Expect = 4e-06
Identities = 31/119 (26%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMAL 62
L + V+ P V+ +VK ++L G+ G+L H+ + L G++ I +Q +A+
Sbjct: 4 LKISVVVPEGEVYTGEVKSVVLPGVEGEFGVLYGHSNMITLLQAGVVEIETENQKEHIAI 63
Query: 63 MGGFARIGNNEITVLVNDA---EKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLA 118
G+A + N + +L + A +KGSD + + A+ L++A R + + LA
Sbjct: 64 NWGYAEVTNERVDILADGAVFIKKGSD----DRDDAISRAKKLLEDASSDRLAVSSVLA 118
>pir||F82715 ATP synthase, epsilon chain XF1142 [imported] - Xylella fastidiosa
(strain 9a5c)
gb|AAF83952.1|AE003950_2 (AE003950) ATP synthase, epsilon chain [Xylella fastidiosa]
Length = 143
Score = 50.8 bits (119), Expect = 7e-06
Identities = 34/137 (24%), Positives = 67/137 (48%), Gaps = 11/137 (8%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIG-ILRIRLNDQWLTM 60
T+ +++ + ++ + ++ + G++GI+P HAPL L G ++ +N + L
Sbjct: 6 TIRCDIVSAEQEIFHGEATLVVATGELGELGIVPKHAPLITRLKPGKVIITTVNGEQLDF 65
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDID-------PQEAQQTLEIAEANLKEAKGKRQTI 113
A+ GG + +T+L + A + ID +EA++ L + AK ++Q +
Sbjct: 66 AISGGILEVQPQVVTILADSAIRADTIDEVAVRKAKEEAERILANRGETIDVAKAQQQLV 125
Query: 114 EANL---ALRRARTRVE 127
EA + AL R R V+
Sbjct: 126 EAVVQMQALERLRRTVK 142
>sp|P05442|ATPE_RHORU ATP SYNTHASE EPSILON CHAIN
pir||PWQFE H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Rhodospirillum rubrum
emb|CAB97256.1| (X02499) ATP synthetase epsilon [Rhodospirillum rubrum]
Length = 134
Score = 50.8 bits (119), Expect = 7e-06
Identities = 27/110 (24%), Positives = 56/110 (50%), Gaps = 1/110 (0%)
Query: 7 VLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQ-WLTMALMGG 65
+++P R+++ V+ +++ G G +P HAPL + G++ + + + GG
Sbjct: 9 LVSPERLLFSEPVEMVVVPGTDGDFGAMPRHAPLLSTVRPGVISTYNGGKVQRRIFVAGG 68
Query: 66 FARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEA 115
FA + + TVL ++A + + + + L+ A+ LKEA + + EA
Sbjct: 69 FAEVTEDRCTVLADEAFDLASLSEEAVRARLQAADDRLKEATSEAEKAEA 118
>pir||E82036 ATP synthase F1, epsilon chain VC2763 [imported] - Vibrio cholerae
(group O1 strain N16961)
gb|AAF95902.1| (AE004342) ATP synthase F1, epsilon subunit [Vibrio cholerae]
Length = 140
Score = 50.0 bits (117), Expect = 1e-05
Identities = 32/132 (24%), Positives = 65/132 (49%), Gaps = 1/132 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI-RLNDQWLT 59
+T +L V++ + ++ V+ ++ + G++GI H PL A+ G++RI +L+
Sbjct: 4 ITFHLDVVSAEKKLFSGLVETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKLHGHEEY 63
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ + GG + TVL + A +G D+D +A++ AE + G +A L
Sbjct: 64 IYVSGGIVEVQPGTATVLADTAIRGEDLDAAKAEEAKRRAEERILNQHGDMDFAQAASEL 123
Query: 120 RRARTRVESINM 131
+A ++ I +
Sbjct: 124 AKAIAQLRVIEL 135
>sp|P12988|ATPE_VIBAL ATP SYNTHASE EPSILON CHAIN
pir||S06083 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain - Vibrio
alginolyticus
emb|CAA34182.1| (X16050) uncC (AA 1-140) [Vibrio alginolyticus]
Length = 140
Score = 49.6 bits (116), Expect = 2e-05
Identities = 31/132 (23%), Positives = 65/132 (48%), Gaps = 1/132 (0%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI-RLNDQWLT 59
+T +L V++ + ++ V+ ++ + G++GI H PL A+ G++RI + +
Sbjct: 4 ITFHLDVVSAEKKIFSGRVETFQVTGSEGELGIFHGHTPLLTAIKPGMVRIVKQHGHEEI 63
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ + GG I TVL + A +G ++D +A++ AE ++ G +A L
Sbjct: 64 IYVSGGMVEIQPGTATVLADTAIRGEELDAAKAEEAKRRAEEQIQNQHGDMDFAQAASEL 123
Query: 120 RRARTRVESINM 131
+A ++ I +
Sbjct: 124 AKAIAQLRVIEL 135
>sp|P56084|ATPE_HELPY ATP SYNTHASE EPSILON CHAIN
Length = 123
Score = 48.8 bits (114), Expect = 3e-05
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMAL 62
L + V+ P V+ +VK ++L G+ G+L H+ + L G++ I +Q +A+
Sbjct: 4 LKISVVVPEGEVYTGEVKSVVLPGVEGEFGVLYGHSNMITLLQAGVIEIETENQKEHIAI 63
Query: 63 MGGFARIGNNEITVLVNDA---EKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLA 118
G+A + N + +L + A +K SD + + A+ L++A R + + LA
Sbjct: 64 NWGYAEVTNERVDILADGAVFIKKESD----DRDDAISRAKKLLEDASSDRLAVSSVLA 118
>pir||C64661 ATP synthase F1, subunit epsilon - Helicobacter pylori (strain
26695)
gb|AAD08173.1| (AE000619) ATP synthase F1, subunit epsilon (atpC) [Helicobacter
pylori 26695]
Length = 124
Score = 48.8 bits (114), Expect = 3e-05
Identities = 30/119 (25%), Positives = 58/119 (48%), Gaps = 7/119 (5%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMAL 62
L + V+ P V+ +VK ++L G+ G+L H+ + L G++ I +Q +A+
Sbjct: 5 LKISVVVPEGEVYTGEVKSVVLPGVEGEFGVLYGHSNMITLLQAGVIEIETENQKEHIAI 64
Query: 63 MGGFARIGNNEITVLVNDA---EKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLA 118
G+A + N + +L + A +K SD + + A+ L++A R + + LA
Sbjct: 65 NWGYAEVTNERVDILADGAVFIKKESD----DRDDAISRAKKLLEDASSDRLAVSSVLA 119
>pir||D81427 H+-transporting ATP synthase (EC 3.6.1.34) F1 sector epsilon chain
Cj0108 [imported] - Campylobacter jejuni (strain NCTC
11168)
emb|CAB72592.1| (AL139074) ATP synthase F1 sector epsilon subunit [Campylobacter
jejuni]
Length = 129
Score = 48.4 bits (113), Expect = 3e-05
Identities = 29/117 (24%), Positives = 55/117 (46%), Gaps = 1/117 (0%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLND-QWLTMA 61
+N ++TP +++ +VK + L + G+ G+L HA L +L G++ I D +A
Sbjct: 5 INFEIVTPLGVIYQGEVKSVTLPGSEGEFGVLKGHAALVSSLKSGVIDIEKADLNHELIA 64
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLA 118
+ G A++ ++I VL A D E ++ L A+ +K + A +
Sbjct: 65 IDAGHAKVDEDKICVLAKGAVWVCGSDESEIEKNLAQAKDLIKSMSSDNAALAATFS 121
>pir||B82952 ATP synthase epsilon chain PA5553 [imported] - Pseudomonas
aeruginosa (strain PAO1)
gb|AAG08938.1|AE004967_9 (AE004967) ATP synthase epsilon chain [Pseudomonas aeruginosa]
Length = 141
Score = 48.0 bits (112), Expect = 4e-05
Identities = 32/122 (26%), Positives = 58/122 (47%), Gaps = 4/122 (3%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILR-IRLNDQWLT 59
+T++ +++ ++ V+ +I G +GI P HAPL L G +R ++ +
Sbjct: 3 ITVHCDIVSAEAEIFSGLVEMVIAHGALGDLGIAPGHAPLITDLKPGPIRLVKQGGEQEV 62
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ GGF + N + VL + + D+D AQ+ L+ AE K +GK + + A
Sbjct: 63 YYISGGFLEVQPNMVKVLADTVVRAGDLDEAAAQEALKAAE---KALQGKGAEFDYSAAA 119
Query: 120 RR 121
R
Sbjct: 120 AR 121
>gb|AAF46561.1| (AE003449) CG2968 gene product [Drosophila melanogaster]
Length = 157
Score = 46.9 bits (109), Expect = 1e-04
Identities = 34/129 (26%), Positives = 62/129 (47%), Gaps = 3/129 (2%)
Query: 3 LNLCVLTPNRIVWDSDV-KEIILSTNSGQVGILPNHAPLAMALDIGILRIRLND-QWLTM 60
+ L N+ +D+ V ++I + + SG GIL H P L G++++ ND + L
Sbjct: 27 MKLTFAAANKTFYDAAVVRQIDVPSFSGSFGILAKHVPTLAVLKPGVVQVVENDGKTLKF 86
Query: 61 ALMGGFARIG-NNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ G + ++ + VL +A DID EA+Q L ++ L A + +A +A+
Sbjct: 87 FVSSGSVTVNEDSSVQVLAEEAHNIEDIDANEARQLLAKYQSQLSSAGDDKAKAQAAIAV 146
Query: 120 RRARTRVES 128
A V++
Sbjct: 147 EVAEALVKA 155
>dbj|BAB08158.1| (AB046112) H+-ATPase epsilon subunit [Corynebacterium glutamicum]
dbj|BAB13361.1| (AB048368) H+-ATPase epsilon subunit [Brevibacterium flavum]
Length = 124
Score = 46.1 bits (107), Expect = 2e-04
Identities = 24/102 (23%), Positives = 55/102 (53%), Gaps = 6/102 (5%)
Query: 7 VLTPNRIVWDSDVKEIILSTNSGQVGILPNHAP-LAMALDIGILRIR-LNDQWLTMALMG 64
+++ R++W + T G++G+LP+H P L ++ G++ I+ ++ + L +
Sbjct: 8 LVSVERMLWAGQASIVTAQTTEGEIGVLPDHEPLLGQLVENGVVTIQPIDGEKLIAGVSD 67
Query: 65 GFARIGNNEITVLVNDAEKGSDIDPQEAQQTL----EIAEAN 102
GF + ++T+L + A +++D A+ L E+A+A+
Sbjct: 68 GFLSVSKEKVTILADFAVWANEVDTASAEADLNSDDELAKAH 109
>sp|Q96252|ATP4_ARATH ATP SYNTHASE DELTA' CHAIN, MITOCHONDRIAL PRECURSOR
dbj|BAA13601.1| (D88376) delta-prime subunit of mitochondrial F1-ATPase
[Arabidopsis thaliana]
dbj|BAB10242.1| (AB013394) ATP synthase delta' chain, mitochondrial precursor
[Arabidopsis thaliana]
Length = 203
Score = 44.5 bits (103), Expect = 5e-04
Identities = 27/103 (26%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Query: 18 DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMGGFARIGNNEIT-V 76
+V +I+ ++GQ+G+LP H P L GI+ + L GFA + N + +
Sbjct: 89 EVDMVIIPASTGQMGVLPGHVPTIAELKPGIMSVHEGTDVKKYFLSSGFAFLHANSVADI 148
Query: 77 LVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ +A IDP + Q+ L + L A + EA + +
Sbjct: 149 IAVEAVPLDHIDPSQVQKGLAEFQQKLASATTDLEKAEAQIGV 191
>sp|Q92196|ATPD_AGABI ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR
emb|CAB04785.1| (Z82020) ATP-synthase delta-subunit [Agaricus bisporus]
Length = 162
Score = 43.4 bits (100), Expect = 0.001
Identities = 31/106 (29%), Positives = 53/106 (49%), Gaps = 9/106 (8%)
Query: 3 LNLCVLTPNRIVWDS-DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
L L + P++ ++ S DV ++ + SG +GIL +H P L G++ + +
Sbjct: 32 LKLSLALPHKAIFSSQDVVQVNIPAESGDMGILSSHVPSIEPLRPGVVEVVEDSGSQKWF 91
Query: 62 LMGGFARI-GNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEA 106
+ GGFA + NN +T+ V +A D ++E ANL+EA
Sbjct: 92 VSGGFATVHPNNRLTINVVEAAPLEDF-------SIEAIRANLQEA 130
>sp|Q9ZCF3|ATPE_RICPR ATP SYNTHASE EPSILON CHAIN
pir||B71641 ATP synthase epsilon chain (atpC) RP800 - Rickettsia prowazekii
emb|CAA15226.1| (AJ235273) ATP SYNTHASE EPSILON CHAIN (atpC) [Rickettsia
prowazekii]
Length = 112
Score = 43.0 bits (99), Expect = 0.001
Identities = 21/93 (22%), Positives = 48/93 (51%), Gaps = 3/93 (3%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI---RLNDQWL 58
T+ + ++TP+ I ++ K + + G G+LP+H P+ + L G+++I +++
Sbjct: 4 TIRVKIITPSSIAFEKQSKMVTMPGEDGMFGVLPHHVPMIVNLKAGLVQIYIYNIHNYEN 63
Query: 59 TMALMGGFARIGNNEITVLVNDAEKGSDIDPQE 91
T + GG I ++ I ++ A +++ E
Sbjct: 64 TYLISGGVTEITSHYINIVTEVAINVTNLSESE 96
>sp|P72248|ATPE_RHOCA ATP SYNTHASE EPSILON CHAIN
emb|CAA67911.1| (X99599) FoF1 ATP synthase [Rhodobacter capsulatus]
Length = 132
Score = 43.0 bits (99), Expect = 0.001
Identities = 31/106 (29%), Positives = 50/106 (46%), Gaps = 7/106 (6%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
T+ +++P R + E+ L G + +P HAP+ ++L GIL + A
Sbjct: 4 TMQFDLVSPERRLASVAASEVRLPGVEGDLTAMPGHAPVILSLRPGILTVVSAAGTAEYA 63
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAK 107
+ GGFA + ++TVL AE+G A+ T + L EAK
Sbjct: 64 VTGGFAEVSGEKVTVL---AERGL----TRAELTAAVHAEMLAEAK 102
>sp|P35111|ATPE_CHLLI ATP SYNTHASE EPSILON CHAIN
pir||S30179 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Chlorobium limicola
gb|AAB25775.2| (S56812) F-ATPase epsilon subunit [Chlorobium limicola]
Length = 88
Score = 42.2 bits (97), Expect = 0.003
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 5 LCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWL-TMALM 63
L ++TP ++ + +V +I G I+ HAPL AL G +R+ L+D+ + +
Sbjct: 10 LDIVTPQKLFFSGEVTSVIAPGLDGLFQIMKGHAPLLAALKSGKVRLSLSDKSEDSFQIE 69
Query: 64 GGFARIGNNEITVLVND 80
GGF + N+ +L D
Sbjct: 70 GGFFEVSGNKAILLTED 86
>sp|P57125|ATPE_BUCAI ATP SYNTHASE EPSILON CHAIN
dbj|BAB12737.1| (AP001118) ATP synthase epsilon chain [Buchnera sp. APS]
Length = 138
Score = 40.6 bits (93), Expect = 0.007
Identities = 31/130 (23%), Positives = 64/130 (48%), Gaps = 4/130 (3%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI--RLNDQWL 58
M L V++ + ++ V++I +S + G++GI P HA L L G++ I + + +
Sbjct: 1 MNFYLDVVSLTKTIFSGFVEKIRVSGSEGELGIYPGHAQLLSILKPGMVYIFHKKDKKEE 60
Query: 59 TMALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLK--EAKGKRQTIEAN 116
+ + GG + + +++L + A D+D +T + AE ++K K + I
Sbjct: 61 CIYISGGILEVQPSVVSILADVAIHAIDLDRSRILKTKKNAEESIKSNNTKINKDAILLQ 120
Query: 117 LALRRARTRV 126
++ A+ RV
Sbjct: 121 ISKEIAKLRV 130
>dbj|BAB22016.1| (AK002330) putative [Mus musculus]
Length = 168
Score = 39.5 bits (90), Expect = 0.017
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 9 TPNRIVWDS-DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALM--GG 65
+P ++ +DS +VK++ + T +G GIL +H P L G++ + D T + G
Sbjct: 44 SPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVGVHTEDGTTTKYFVSSGS 103
Query: 66 FARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGK------RQTIEANLAL 119
++ + +L +A +D A+ LE A++ L A + + IEAN AL
Sbjct: 104 VTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEAL 163
Query: 120 RRA 122
+A
Sbjct: 164 VKA 166
>emb|CAB89879.1| (AL354632) atp synthase delta chain, mitochondrial precursor
[Schizosaccharomyces pombe]
Length = 160
Score = 39.5 bits (90), Expect = 0.017
Identities = 27/107 (25%), Positives = 53/107 (49%), Gaps = 3/107 (2%)
Query: 3 LNLCVLTPNRIVWDS-DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIR-LNDQWLTM 60
L L + P + +++ V ++ + G++GIL +H P+ L G++ + +
Sbjct: 31 LVLSMALPYQTIYEKVPVTQVDIPAEDGEMGILKDHVPMIQCLKPGVISVTDESSNKSKY 90
Query: 61 ALMGGFA-RIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEA 106
+ GGFA + +NE+++ V +A K D A Q LE +A + +
Sbjct: 91 FISGGFAVQQPSNELSITVPEAYKLEDFSSSVANQLLEKHKAEMNSS 137
>pir||C70359 ATP synthase F1 epsilon subunit - Aquifex aeolicus
gb|AAC06856.1| (AE000701) ATP synthase F1 epsilon subunit [Aquifex aeolicus]
Length = 132
Score = 39.5 bits (90), Expect = 0.017
Identities = 28/124 (22%), Positives = 60/124 (47%), Gaps = 2/124 (1%)
Query: 7 VLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMGGF 66
+++P +V+ +V+ + + T G+VGIL NH L L G++ +D+ +A+ G
Sbjct: 6 IVSPQGMVYSGEVESVNVPTVEGEVGILENHMYLMTLLKPGLVYFNGDDK-NGIAVTYGV 64
Query: 67 ARIGNNEITVLVNDAEKGSDIDP-QEAQQTLEIAEANLKEAKGKRQTIEANLALRRARTR 125
+ ++ +L +A + + P + ++ E A + A+ + E +ART
Sbjct: 65 LDVTPQKVLILAEEAYEVGKLPPASKLKEEFEEAVKKMATAQTMEELKEWEKEAEKARTL 124
Query: 126 VESI 129
+E +
Sbjct: 125 LELV 128
>dbj|BAB31035.1| (AK018011) putative [Mus musculus]
Length = 168
Score = 39.1 bits (89), Expect = 0.022
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 9 TPNRIVWDS-DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALM--GG 65
+P ++ +DS +VK++ + T +G GIL +H P L G++ + D T + G
Sbjct: 44 SPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGTTTKYFVSSGS 103
Query: 66 FARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGK------RQTIEANLAL 119
++ + +L +A +D A+ LE A++ L A + + IEAN AL
Sbjct: 104 VTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEAL 163
Query: 120 RRA 122
+A
Sbjct: 164 VKA 166
>dbj|BAB23806.1| (AK005082) putative [Mus musculus]
Length = 153
Score = 39.1 bits (89), Expect = 0.022
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 9 TPNRIVWDS-DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALM--GG 65
+P ++ +DS +VK++ + T +G GIL +H P L G++ + D T + G
Sbjct: 29 SPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGTTTKYFVSSGS 88
Query: 66 FARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGK------RQTIEANLAL 119
++ + +L +A +D A+ LE A++ L A + + IEAN AL
Sbjct: 89 VTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEAL 148
Query: 120 RRA 122
+A
Sbjct: 149 VKA 151
>dbj|BAB27577.1| (AK011374) putative [Mus musculus]
Length = 168
Score = 38.3 bits (87), Expect = 0.038
Identities = 33/123 (26%), Positives = 59/123 (47%), Gaps = 9/123 (7%)
Query: 9 TPNRIVWDS-DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMGGFA 67
+P ++ +DS +VK++ + T +G GIL +H P L G++ + D T + +
Sbjct: 44 SPTQVFFDSANVKQVDVPTLTGAFGILASHVPTLQVLRPGLVVVHTEDGTTTKYFVSSSS 103
Query: 68 RIGN--NEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGK------RQTIEANLAL 119
N + + +L +A +D A+ LE A++ L A + + IEAN AL
Sbjct: 104 VTVNADSSVQLLAEEAVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEAL 163
Query: 120 RRA 122
+A
Sbjct: 164 VKA 166
>sp|O51871|ATPE_BUCAP ATP SYNTHASE EPSILON CHAIN
gb|AAC38109.1| (AF008210) ATP synthase subunit epsilon [Buchnera aphidicola]
Length = 138
Score = 38.3 bits (87), Expect = 0.038
Identities = 29/132 (21%), Positives = 61/132 (45%), Gaps = 3/132 (2%)
Query: 1 MTLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRI-RLNDQWLT 59
M L +++ + ++ V I +S + G++GI P H L + G++ I N
Sbjct: 1 MDFYLDIVSVEKRIFSGLVDRIQVSGSEGEMGIYPGHTQLLSIIKPGVIYIFHKNKTEEC 60
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKE--AKGKRQTIEANL 117
+ + GG + + +++L + A +G D+D + + + AE K+ K+ + +
Sbjct: 61 LYISGGILEVQPSVVSILADVAIRGIDLDRKRVVKAKKQAEEYFKKETTNVKKDDVLLEI 120
Query: 118 ALRRARTRVESI 129
+ A+ RV I
Sbjct: 121 SKAIAKLRVLEI 132
>pir||G82928 ATP synthase epsilon chain UU128 [imported] - Ureaplasma
urealyticum
gb|AAF30534.1|AE002114_1 (AE002114) ATP synthase epsilon chain [Ureaplasma urealyticum]
Length = 136
Score = 37.5 bits (85), Expect = 0.065
Identities = 23/112 (20%), Positives = 53/112 (46%), Gaps = 2/112 (1%)
Query: 5 LCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALD--IGILRIRLNDQWLTMAL 62
L ++TP + + DV + L T+ G++ +LP+H PL ++ + +R N + L
Sbjct: 7 LKIVTPYAQILEKDVYSVELKTSEGRITVLPDHNPLMSTIENHVAYIRELPNTPRKPLLL 66
Query: 63 MGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE 114
+ G I +++ V + + +I E +L + +L + ++ ++
Sbjct: 67 LDGIVYIEQHQVRVFSDYFKFLDEIQIDEINSSLNQLKHDLNNEEDDKKKLQ 118
>gi|12045260 ATP synthase F1, subunit epsilon (atpC) [Mycoplasma genitalium]
sp|P47638|ATPE_MYCGE ATP SYNTHASE EPSILON CHAIN
pir||A64244 ATP synthase epsilon chain (atpC) - Mycoplasma genitalium
gb|AAC71626.1| (U39722) ATP synthase F1, subunit epsilon (atpC) [Mycoplasma
genitalium]
Length = 133
Score = 37.5 bits (85), Expect = 0.065
Identities = 33/119 (27%), Positives = 52/119 (42%), Gaps = 5/119 (4%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMAL 62
L VL+P+ I D + + T G +G+ N APL A+ + +I DQ A+
Sbjct: 4 LRFLVLSPSGIKLDKTIISAQVKTTEGYIGLNFNRAPLIAAIQSHLCKIIFADQTKREAI 63
Query: 63 MG-GFARIGNNEITVLVNDAEKGSDIDPQEA---QQTLEIAEANLKEAKGKRQTIEANL 117
+G G I E + + ++D E + LE ++K+AK IE NL
Sbjct: 64 IGAGLMLIKKTEAKIFTENFVFADEVDINETLKRKTELERKIHHIKDAK-LNVKIEQNL 121
>sp|P05441|ATPE_RHOBL ATP SYNTHASE EPSILON CHAIN
pir||S04676 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Rhodopseudomonas blastica
emb|CAA77304.1| (Z00018) ATPase epsilon subunit [Rhodobacter blasticus]
Length = 130
Score = 37.5 bits (85), Expect = 0.065
Identities = 26/100 (26%), Positives = 43/100 (43%)
Query: 2 TLNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
TL +++P R + E+ + +G + + HAP L GILR +
Sbjct: 4 TLQFDLVSPERRLASVQATEVQIPGAAGDMTAMQGHAPTITTLRPGILRAVSAEGTKAYV 63
Query: 62 LMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEA 101
+ GGFA I ++VL A ++D + Q + A A
Sbjct: 64 VTGGFAEISATGVSVLAERAVPLDEMDAKLMDQLVADASA 103
>sp|P78700|ATPD_KLULA ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR
gb|AAC15908.1| (U88046) ATP synthase F1 deta subunit [Kluyveromyces lactis]
Length = 158
Score = 36.7 bits (83), Expect = 0.11
Identities = 24/89 (26%), Positives = 41/89 (45%), Gaps = 2/89 (2%)
Query: 19 VKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMGGFARI-GNNEITVL 77
V ++ L SGQ+GIL NH P L G++ + L + GGFA + ++ + +
Sbjct: 48 VTQVNLPAKSGQIGILANHVPTVEQLVPGVVEV-LEGSSKKFFVSGGFATVQPDSTLAIT 106
Query: 78 VNDAEKGSDIDPQEAQQTLEIAEANLKEA 106
+A P+ + L A+ N+ A
Sbjct: 107 SVEAFPLESFSPENVRSLLAEAQKNVSSA 135
>sp|Q09544|ATPD_CAEEL ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR
pir||T16501 hypothetical protein F58F12.1 - Caenorhabditis elegans
gb|AAC46699.1| (U23170) similar to ATP synthases [Caenorhabditis elegans]
Length = 163
Score = 36.7 bits (83), Expect = 0.11
Identities = 26/101 (25%), Positives = 48/101 (46%), Gaps = 3/101 (2%)
Query: 3 LNLCVLTPNRIVWDSDV-KEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
L L +P+ V+ + V K++ + T +G VG+L NH P L G++ + N+ +
Sbjct: 31 LRLTFASPDTAVFSNAVVKQVDVPTLAGMVGVLANHVPTIGVLKPGVVSVTTNEGTVQRL 90
Query: 62 LM--GGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAE 100
+ G + + VL + K +ID A+ L+ A+
Sbjct: 91 FVSSGTLSVNIDGSCQVLAEEVLKVEEIDESAARAELDAAQ 131
>gi|6320200 ATP synthase delta subunit; Atp16p [Saccharomyces cerevisiae]
sp|Q12165|ATPD_YEAST ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR
pir||S45632 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain precursor
- yeast (Saccharomyces cerevisiae)
emb|CAA79912.1| (Z21857) ATP synthase delta subunit [Saccharomyces cerevisiae]
emb|CAA88057.1| (Z48008) ATP synthase delta subunit [Saccharomyces cerevisiae]
emb|CAA88355.1| (Z48432) ATP synthase delta subunit (Z21857) [Saccharomyces
cerevisiae]
emb|CAA98560.1| (Z74052) ORF YDL004w [Saccharomyces cerevisiae]
Length = 160
Score = 36.7 bits (83), Expect = 0.11
Identities = 24/100 (24%), Positives = 46/100 (46%), Gaps = 2/100 (2%)
Query: 17 SDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMGGFARI-GNNEIT 75
S+V ++ L SG++G+L NH P L G++ + + GGFA + ++++
Sbjct: 47 SEVTQVNLPAKSGRIGVLANHVPTVEQLLPGVVEVMEGSNSKKFFISGGFATVQPDSQLC 106
Query: 76 VLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEA 115
V +A + + L A+ N+ + R+ EA
Sbjct: 107 VTAIEAFPLESFSQENIKNLLAEAKKNVSSSDA-REAAEA 145
>sp|P35434|ATPD_RAT ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR
gb|AAC28872.1| (U00926) delta subunit of F1F0 ATPase [Rattus norvegicus]
Length = 168
Score = 36.0 bits (81), Expect = 0.19
Identities = 30/123 (24%), Positives = 58/123 (46%), Gaps = 9/123 (7%)
Query: 9 TPNRIVWD-SDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALM--GG 65
+P ++ +D ++V+++ + T +G GIL +H P L G++ + D T + G
Sbjct: 44 SPTQVFFDGANVRQVDVPTLTGAFGILASHVPTLQVLRPGLVMVHAEDGTTTKYFVSSGS 103
Query: 66 FARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGK------RQTIEANLAL 119
++ + +L + +D A+ LE A++ L A + + IEAN AL
Sbjct: 104 VTVNADSSVQLLAEEVVTLDMLDLGAARANLEKAQSELSGAADEAARAEIQIRIEANEAL 163
Query: 120 RRA 122
+A
Sbjct: 164 VKA 166
>sp|Q40089|ATP4_IPOBA ATP SYNTHASE DELTA' CHAIN, MITOCHONDRIAL PRECURSOR
pir||A41740 H+-transporting ATP synthase (EC 3.6.1.34) delta' chain precursor -
sweet potato
dbj|BAA01511.1| (D10660) mitochondrial F1-ATPase delta subunit [Ipomoea batatas]
Length = 200
Score = 35.6 bits (80), Expect = 0.25
Identities = 25/103 (24%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 18 DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMGGFARI-GNNEITV 76
+V +I+ +GQ+G+LP H L G++ + + + GGFA I N+ +
Sbjct: 86 EVDMVIIPATTGQMGVLPGHVATIAELKPGVMSVHEGNDVSKYFVSGGFAFIHANSFADI 145
Query: 77 LVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ +A ID Q+ L L A + EA + +
Sbjct: 146 IAVEAVPLDRIDANLVQKGLAEFTQKLNTASTDVEKAEAQIGV 188
>sp|Q41000|ATP4_PEA ATP SYNTHASE DELTA' CHAIN, MITOCHONDRIAL PRECURSOR
pir||T06549 H+-transporting ATP synthase (EC 3.6.1.34) delta' chain precursor -
garden pea
gb|AAA33646.1| (L13320) F1-ATPase delta-prime subunit [Pisum sativum]
Length = 197
Score = 34.8 bits (78), Expect = 0.43
Identities = 22/103 (21%), Positives = 44/103 (42%), Gaps = 1/103 (0%)
Query: 18 DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALMGGFARIGNNEIT-V 76
+V +I+ +G++G+LP H L G+L ++ + GF I N + +
Sbjct: 83 EVDSVIIPATTGEMGVLPGHVATIAELKPGVLTVQEGTDTTKYFVSSGFRFIHANSVADI 142
Query: 77 LVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLAL 119
+ +A + +D Q+ L+ L A + EA + +
Sbjct: 143 IAVEAVPVNQLDRDLVQKGLQEFTQKLNSATTDLEKREAQIGI 185
>pdb|1E79|H Chain H, Bovine F1-Atpase Inhibited By Dccd
(Dicyclohexylcarbodiimide)
Length = 146
Score = 33.6 bits (75), Expect = 0.96
Identities = 30/123 (24%), Positives = 58/123 (46%), Gaps = 9/123 (7%)
Query: 9 TPNRIVWDS-DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALM--GG 65
+P ++ ++S +V+++ + T +G GIL H P L G++ + D + + G
Sbjct: 22 SPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGS 81
Query: 66 FARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGK------RQTIEANLAL 119
++ + +L +A +D A+ LE A++ L A + + IEAN AL
Sbjct: 82 VTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIRIEANEAL 141
Query: 120 RRA 122
+A
Sbjct: 142 VKA 144
>sp|P05630|ATPD_BOVIN ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR
pir||PWBOD H+-transporting ATP synthase (EC 3.6.1.34) delta chain precursor -
bovine
emb|CAA34885.1| (X17019) ATP synthase [Bos taurus]
Length = 168
Score = 33.6 bits (75), Expect = 0.96
Identities = 30/123 (24%), Positives = 58/123 (46%), Gaps = 9/123 (7%)
Query: 9 TPNRIVWDS-DVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALM--GG 65
+P ++ ++S +V+++ + T +G GIL H P L G++ + D + + G
Sbjct: 44 SPTQVFFNSANVRQVDVPTQTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGS 103
Query: 66 FARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGK------RQTIEANLAL 119
++ + +L +A +D A+ LE A++ L A + + IEAN AL
Sbjct: 104 VTVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQSELLGAADEATRAEIQIRIEANEAL 163
Query: 120 RRA 122
+A
Sbjct: 164 VKA 166
>gi|4502297 ATP synthase, H+ transporting, mitochondrial F1 complex, delta
subunit [Homo sapiens]
sp|P30049|ATPD_HUMAN ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR
pir||S22348 H+-transporting ATP synthase (EC 3.6.1.34) delta chain precursor -
human
emb|CAA45016.1| (X63422) H(+)-transporting ATP synthase [Homo sapiens]
emb|CAA45017.1| (X63423) H(+)-transporting ATP synthase [Homo sapiens]
gb|AAC04304.1|AAC04304 (AC004221) ATPD_HUMAN [Homo sapiens]
gb|AAH02389.1|AAH02389 (BC002389) ATP synthase, H+ transporting, mitochondrial F1 complex,
delta subunit [Homo sapiens]
Length = 168
Score = 33.2 bits (74), Expect = 1.3
Identities = 31/123 (25%), Positives = 60/123 (48%), Gaps = 9/123 (7%)
Query: 9 TPNRIVWD-SDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMALM--GG 65
+P ++ ++ ++V+++ + T +G GIL H P L G++ + D + + G
Sbjct: 44 SPTQVFFNGANVRQVDVPTLTGAFGILAAHVPTLQVLRPGLVVVHAEDGTTSKYFVSSGS 103
Query: 66 FARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANL-----KEAKGKRQ-TIEANLAL 119
A ++ + +L +A +D A+ LE A+A L + + + Q IEAN AL
Sbjct: 104 IAVNADSSVQLLAEEAVTLDMLDLGAAKANLEKAQAELVGTADEATRAEIQIRIEANEAL 163
Query: 120 RRA 122
+A
Sbjct: 164 VKA 166
>gb|AAG55260.1|AE005269_4 (AE005269) putative membrane protein [Escherichia coli O157:H7]
Length = 380
Score = 32.8 bits (73), Expect = 1.7
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 87 IDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
IDP++A+ ++ EA L E + +RQ EA L L R
Sbjct: 101 IDPEQAENQIKEVEATLMELRAQRQQAEAELKLAR 135
>sp|P75830|YBJY_ECOLI HYPOTHETICAL 41.7 KDA PROTEIN IN AQPZ-CSPD INTERGENIC REGION
dbj|BAA35597.1| (D90725) MtrC protein [Escherichia coli]
Length = 371
Score = 32.8 bits (73), Expect = 1.7
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 87 IDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
IDP++A+ ++ EA L E + +RQ EA L L R
Sbjct: 92 IDPEQAENQIKEVEATLMELRAQRQQAEAELKLAR 126
>sp|P56525|ATPD_NEUCR ATP SYNTHASE DELTA CHAIN, MITOCHONDRIAL PRECURSOR
Length = 139
Score = 32.8 bits (73), Expect = 1.7
Identities = 32/128 (25%), Positives = 55/128 (42%), Gaps = 32/128 (25%)
Query: 3 LNLCVLTPNRIVWDS-DVKEIILSTNSGQVGILPNHAPLAMALDIGILRI----RLNDQW 57
+ L + P++ ++ S DV ++ + SG++G+L NH P L G++ + N Q+
Sbjct: 9 IKLSLSLPHQAIYKSQDVVQVNIPAVSGEMGVLANHVPSIEQLKPGLVEVIEESGSNKQY 68
Query: 58 LTMALMGGFARI-------------------GNNEITVLVNDAEK-----GSDIDPQEAQ 93
L GGFA + + + +A+K GS D EAQ
Sbjct: 69 F---LSGGFAVVQPGSKLSINAVEGYALEDFSAEAVRAQIAEAQKIVSGGGSQQDIAEAQ 125
Query: 94 QTLEIAEA 101
LE+ E+
Sbjct: 126 VELEVLES 133
>pir||F64826 probable membrane protein b0878 - Escherichia coli
gb|AAC73965.1| (AE000189) putative membrane protein [Escherichia coli K12]
Length = 380
Score = 32.8 bits (73), Expect = 1.7
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 87 IDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
IDP++A+ ++ EA L E + +RQ EA L L R
Sbjct: 101 IDPEQAENQIKEVEATLMELRAQRQQAEAELKLAR 135
>pir||B83186 probable RND efflux membrane fusion protein precursor PA3677
[imported] - Pseudomonas aeruginosa (strain PAO1)
gb|AAG07065.1|AE004787_5 (AE004787) probable RND efflux membrane fusion protein precursor
[Pseudomonas aeruginosa]
Length = 367
Score = 32.1 bits (71), Expect = 2.8
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 9/72 (12%)
Query: 68 RIGNNEITVLVNDAEKG------SDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALRR 121
RIG I LV E+ +++DPQ+ + LE A A + A+ QT+ A RR
Sbjct: 64 RIGGKVIRRLVEVGERVKKDQPLAELDPQDVRLQLEAARAQVSAAEANLQTVRAE--YRR 121
Query: 122 ARTRVESINMIS 133
RT ++ N++S
Sbjct: 122 YRTLLDR-NLVS 132
>dbj|BAA76954.1| (AB020609) human Ku80 autoantigen homologue [Xenopus laevis]
Length = 726
Score = 32.1 bits (71), Expect = 2.8
Identities = 17/46 (36%), Positives = 27/46 (57%)
Query: 61 ALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEA 106
ALM + I EI+++ + KGS + P+EA+Q L E ++EA
Sbjct: 665 ALMEFWDIIVQEEISLITSSESKGSSVTPEEAKQFLAQKEEKVEEA 710
>gb|AAD34597.1|AF147739_1 (AF147739) myosin XI [Zea mays]
Length = 1352
Score = 31.7 bits (70), Expect = 3.7
Identities = 15/60 (25%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 71 NNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEA-KGKRQTIEANLALRRARTRVESI 129
N+++ +V+ EK D ++ Q+T +I+E LK+A + + ++ N+A+ R + ++ ++
Sbjct: 817 NDKLKTMVSSLEKKIDDTEKKYQETSKISEDRLKQAMDAETKIVDLNMAMLRLQEKISTM 876
>gb|AAC38050.1| (AF028006) ATP synthase epsilon subunit [Methanosarcina barkeri]
Length = 144
Score = 31.3 bits (69), Expect = 4.9
Identities = 30/131 (22%), Positives = 52/131 (38%), Gaps = 4/131 (3%)
Query: 3 LNLCVLTPNRIVWDSD-VKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMA 61
+NL +L P ++ + V I+ G G+LP+ L GIL +
Sbjct: 16 MNLTILLPFQVFAEKKGVSRIVAEGREGSFGLLPHRLDCVATLGPGILTYETESEGEVYV 75
Query: 62 LMGGFARIGNNE-ITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIEANLALR 120
+ I N + + V V DA G+D+ + + +E L E + K +++ L
Sbjct: 76 AVDEGVLIKNGQYVLVSVRDAIFGTDL--SQLHEAVEKEFLTLDETEQKIRSVMVKLETG 133
Query: 121 RARTRVESINM 131
R E N+
Sbjct: 134 LIRRLAEFQNV 144
>sp|P54576|MCPC_BACSU METHYL-ACCEPTING CHEMOTAXIS PROTEIN MCPC
pir||A69656 methyl-accepting chemotaxis protein mcpC - Bacillus subtilis
emb|CAA66052.1| (X97385) methyl-accepting chemotaxis protein [Bacillus subtilis]
emb|CAB13268.1| (Z99111) methyl-accepting chemotaxis protein [Bacillus subtilis]
Length = 654
Score = 30.9 bits (68), Expect = 6.4
Identities = 22/110 (20%), Positives = 49/110 (44%), Gaps = 8/110 (7%)
Query: 5 LCVLTPNRIVWDSDVKEIILSTN--SGQVGILPNHAPLAMA---LDIGILRIRLNDQWLT 59
L TP+++VW K+++ + IL + +A L + ++ +N Q +
Sbjct: 137 LAAETPDQVVWTEPYKDVVTGDMIVTASKAILDRQKVIGVASYDLKLSAIQSLVNKQKVP 196
Query: 60 MALMGGFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGK 109
GFA + + +L + + +G +I + QT+ + +++ GK
Sbjct: 197 YK---GFAFLADASGNLLAHPSNQGKNISKDQTLQTIASEKKGIQDVNGK 243
>sp|Q50332|ATPE_MYCPN ATP SYNTHASE EPSILON CHAIN
pir||S62850 H+-transporting ATP synthase (EC 3.6.1.34) epsilon chain -
Mycoplasma pneumoniae (strain ATCC 29342)
pir||S73571 ATP synthase epsilon chain - Mycoplasma pneumoniae (SGC3) (ATCC
29342)
gb|AAC43660.1| (U43738) ATP synthase epsilon chain [Mycoplasma pneumoniae]
gb|AAB95893.1| (AE000024) ATP synthase epsilon chain [Mycoplasma pneumoniae]
Length = 133
Score = 30.9 bits (68), Expect = 6.4
Identities = 25/113 (22%), Positives = 46/113 (40%), Gaps = 1/113 (0%)
Query: 3 LNLCVLTPNRIVWDSDVKEIILSTNSGQVGILPNHAPLAMALDIGILRIRLNDQWLTMAL 62
L VL+P+ I D + + T +G +G+ N APL A+ +I + A+
Sbjct: 4 LRFLVLSPSGIKLDQAIISAQVKTTNGYLGLNYNRAPLIAAVQSHFCKILFANNTRRNAI 63
Query: 63 MG-GFARIGNNEITVLVNDAEKGSDIDPQEAQQTLEIAEANLKEAKGKRQTIE 114
+G G I E + + +ID + + E + +K + I+
Sbjct: 64 IGAGLVLIKKTEAKIFTENFVFEDEIDLEATLKRKAELERQMNHSKDLKLNIK 116
>gb|AAK03081.1| (AE006139) unknown [Pasteurella multocida]
Length = 375
Score = 30.5 bits (67), Expect = 8.4
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 98 IAEANLKEAKGKRQTIEANLALRRARTRVESINM 131
IAE LK AK + ++ EANL ++RA + +N+
Sbjct: 90 IAETELKLAKAELESAEANLEVKRANLVLSEVNL 123
>gb|AAA34590.1| (M55275) endonuclease SceI 75 kDa subunit [Saccharomyces
cerevisiae]
Length = 655
Score = 30.5 bits (67), Expect = 8.4
Identities = 23/76 (30%), Positives = 35/76 (45%), Gaps = 13/76 (17%)
Query: 63 MGGFARIGNNEITVLVNDAEKGSDID---------PQEAQQTLEIAEANLKEAKGKRQTI 113
+ G + + NEI +VNDAEK D +A Q E +LKE +GK
Sbjct: 524 VAGSSGLSENEIEQMVNDAEKFKSQDEARKQAIETANKADQLANDTENSLKEFEGKVDKA 583
Query: 114 EANLALRRARTRVESI 129
EA ++ R ++ S+
Sbjct: 584 EA----QKVRDQITSL 595
>gi|6322505 Mitochondrial matrix protein involved in protein import; subunit of
SceI endonuclease; Ssc1p [Saccharomyces cerevisiae]
sp|P12398|HS77_YEAST HEAT SHOCK PROTEIN SSC1, MITOCHONDRIAL PRECURSOR (ENDONUCLEASE SCEI
75 KD SUBUNIT)
pir||HHBYS1 dnaK-type molecular chaperone SSC1 precursor, mitochondrial - yeast
(Saccharomyces cerevisiae)
gb|AAA63792.1| (M27229) heat shock protein [Saccharomyces cerevisiae]
emb|CAA89573.1| (Z49545) ORF YJR045c [Saccharomyces cerevisiae]
gb|AAA88747.1| (L36344) ORF; putative [Saccharomyces cerevisiae]
Length = 654
Score = 30.5 bits (67), Expect = 8.4
Identities = 23/76 (30%), Positives = 35/76 (45%), Gaps = 13/76 (17%)
Query: 63 MGGFARIGNNEITVLVNDAEKGSDID---------PQEAQQTLEIAEANLKEAKGKRQTI 113
+ G + + NEI +VNDAEK D +A Q E +LKE +GK
Sbjct: 524 VAGSSGLSENEIEQMVNDAEKFKSQDEARKQAIETANKADQLANDTENSLKEFEGKVDKA 583
Query: 114 EANLALRRARTRVESI 129
EA ++ R ++ S+
Sbjct: 584 EA----QKVRDQITSL 595
Database: nr
Posted date: Mar 14, 2001 1:25 PM
Number of letters in database: 201,912,487
Number of sequences in database: 640,428
Lambda K H
0.317 0.134 0.371
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 45761640
Number of Sequences: 640428
Number of extensions: 1633084
Number of successful extensions: 5327
Number of sequences better than 10.0: 129
Number of HSP's better than 10.0 without gapping: 107
Number of HSP's successfully gapped in prelim test: 22
Number of HSP's that attempted gapping in prelim test: 5167
Number of HSP's gapped (non-prelim): 136
length of query: 133
length of database: 201,912,487
effective HSP length: 56
effective length of query: 77
effective length of database: 166,048,519
effective search space: 12785735963
effective search space used: 12785735963
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 41 (21.7 bits)
S2: 67 (30.5 bits)
Lotus japonicus(Cp)