![]() BLAST2 result BLASTP 2.1.2 [Oct-19-2000] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= BAB33176.1 353 aa (353 letters) Database: nr 640,428 sequences; 201,912,487 total letters Searching..................................................done ![]() Score E Sequences producing significant alignments: (bits) Value sp|P06585|PSBA_PEA PHOTOSYSTEM Q(B) PROTEIN PRECURSOR (32 KD THY... 728 0.0 sp|P11848|PSBA_SINAL PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 726 0.0 sp|P18290|PSBA_BRANA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 725 0.0 sp|P02957|PSBA_SOYBN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 725 0.0 gi|7525013 PSII 32 KDa protein [Arabidopsis thaliana] >gi|250008... 725 0.0 gi|11465935 PSII 32kd protein [Nicotiana tabacum] >gi|11497504|r... 725 0.0 sp|P02956|PSBA_AMAHY PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 724 0.0 dbj|BAA76900.1| (AB025940) QB protein [Nicotiana tabacum] 723 0.0 sp|P36491|PSBA_POPDE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 723 0.0 emb|CAA30818.1| (X08017) psbA polypeptide (AA 1-353) [Nicotiana ... 723 0.0 sp|P04998|PSBA_MEDSA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 723 0.0 sp|Q33282|PSBA_VIGUN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 723 0.0 sp|P32036|PSBA_CUSRE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 723 0.0 sp|P04999|PSBA_PETHY PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 723 0.0 gb|AAD00106.1| (U63020) D1 protein [Magnolia pyramidata] 723 0.0 sp|P10510|PSBA_SECCE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 722 0.0 sp|P04848|PSBA_TOBAC PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 722 0.0 emb|CAA25252.1| (X00616) P32 protein [Nicotiana tabacum] 721 0.0 gi|11466764 PSII 32kDa protein [Oryza sativa] >gi|131251|sp|P120... 721 0.0 gb|AAA74185.1| (U25659) photosystem II protein D1 [Solanum nigrum] 721 0.0 sp|P05337|PSBA_HORVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 721 0.0 pir||F2NUD1 photosystem II protein D1 precursor - rye chloroplast 719 0.0 gi|11467171 PSII 32 KDa protein [Zea mays] >gi|1346840|sp|P48183... 718 0.0 dbj|BAA82767.1| (AB020584) psbA [Conocephalum conicum] 715 0.0 sp|P27201|PSBA_SPIOG PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 715 0.0 dbj|BAA82757.1| (AB020574) psbA [Conocephalum conicum] >gi|56889... 714 0.0 gi|11466695 psbA [Marchantia polymorpha] >gi|131249|sp|P06402|PS... 713 0.0 dbj|BAA82776.2| (AB020605) psbA [Conocephalum conicum] 713 0.0 dbj|BAA82764.1| (AB020581) psbA [Conocephalum conicum] >gi|56890... 712 0.0 dbj|BAA82760.1| (AB020577) psbA [Conocephalum conicum] 712 0.0 dbj|BAA82779.1| (AB020619) similar to SWISS-PROT:p06402 [Conocep... 712 0.0 dbj|BAA82770.1| (AB020587) psbA [Conocephalum conicum] >gi|58115... 711 0.0 dbj|BAA82782.1| (AB020622) similar to SWISS-PROT:p06402 [Dumorti... 711 0.0 sp|P13910|PSBA_VICFA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 711 0.0 emb|CAA04456.1| (AJ001003) 32 kD PSII D1 protein [Picea abies] 710 0.0 sp|P50155|PSBA_PICAB PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 708 0.0 gi|7524753 PSII 32kDa protein [Pinus thunbergii] >gi|131254|sp|P... 708 0.0 dbj|BAA82781.1| (AB020621) similar to SWISS-PROT:p06402 [Conocep... 705 0.0 gb|AAK11251.1|AF329007_1 (AF329007) PSII D1 protein [Prunus x ye... 703 0.0 gb|AAG60680.1|AF315340_1 (AF315340) PSII D1 protein [Prunus sarg... 702 0.0 gb|AAG60679.1|AF315339_1 (AF315339) PSII D1 protein [Prunus x ye... 702 0.0 gb|AAG60681.1|AF315341_1 (AF315341) PSII D1 protein [Prunus serr... 700 0.0 gi|7524765 photosystem II D1 protein [Chlorella vulgaris] >gi|30... 700 0.0 gb|AAK11250.1|AF329006_1 (AF329006) PSII D1 protein [Prunus x ye... 699 0.0 gb|AAK11253.1|AF329009_1 (AF329009) PSII D1 protein [Prunus x ye... 698 0.0 gb|AAG60670.1|AF314009_1 (AF314009) PSII D1 protein [Prunus x ye... 698 0.0 gb|AAK11252.1|AF329008_1 (AF329008) PSII D1 protein [Prunus x ye... 697 0.0 gb|AAG60671.1|AF314010_1 (AF314010) PSII D1 protein [Prunus x ye... 697 0.0 gb|AAK11254.1|AF329010_1 (AF329010) PSII D1 protein [Prunus x ye... 696 0.0 sp|P35860|PSBA_CHLEL PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 695 0.0 sp|P09752|PSBA_CHLMO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 693 0.0 gi|11467759 D1 reaction-center protein of photosystem II [Nephro... 693 0.0 gb|AAG60682.1|AF315342_1 (AF315342) PSII D1 protein [Prunus subh... 689 0.0 gi|11466347 D1 reaction center protein of photosystem II [Mesost... 689 0.0 sp|P07753|PSBA_CHLRE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 688 0.0 gb|AAC99848.1| (U28165) photosystem II core 32 kDa protein [Palm... 669 0.0 gi|11465678 Photosystem II Q(b) protein (D1) [Porphyra purpurea]... 667 0.0 gi|11467381 D1 protein of the photosystem II reaction center cor... 665 0.0 sp|P04997|PSB2_SYNP7 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 665 0.0 sp|Q32389|PSBA_HETCA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 664 0.0 sp|P15191|PSBA_PROHO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 663 0.0 sp|P31694|PSB2_ANASP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 663 0.0 pir||F2KTD1 photosystem II protein D1 precursor - Cyanophora par... 663 0.0 gi|11467479 PSII, D1 reaction-center protein [Odontella sinensis... 663 0.0 sp|P24625|PSBA_ANTSP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 660 0.0 sp|P29270|PSBA_ANAAZ PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 659 0.0 sp|P35876|PSB1_SYNEN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 659 0.0 gb|AAF37850.1|AF227740_1 (AF227740) photosystem II subunit core ... 659 0.0 sp|P46242|PSB1_ANASP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 659 0.0 pir||S26586 photosystem II protein D1 precursor - Synechococcus ... 658 0.0 sp|P07063|PSBA_FREDI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 656 0.0 gi|11467647 PSII D1 reaction-center protein [Guillardia theta] >... 655 0.0 gi|11465541 unknown; Photosystem II Q(b) protein (D1) [Cyanidium... 655 0.0 sp|P48265|PSBA_BUMFI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 655 0.0 sp|P51765|PSB1_SYNVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 654 0.0 sp|P04996|PSB1_SYNP7 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 653 0.0 sp|P16033|PSB2_SYNY3 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 652 0.0 sp|P51764|PSB2_MICAE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 651 0.0 gb|AAA84445.1| (K01200) psbA gene product [Amaranthus hybridus] ... 648 0.0 sp|P51759|PSBA_CYAA5 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 647 0.0 sp|P14660|PSBA_SYNY4 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 647 0.0 gb|AAD40182.1|AF156980_1 (AF156980) photosystem II D1 protein [S... 646 0.0 sp|P24725|PSBA_CYACA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 646 0.0 sp|P24726|PSBA_ECTSI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 645 0.0 sp|P35877|PSB2_SYNEN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 642 0.0 gi|11466988 PSII D1-polypeptide [Euglena gracilis] >gi|464479|sp... 641 0.0 emb|CAA25447.1| (X00929) 32-Kda thylakoid membrane protein [Eugl... 640 0.0 gb|AAD51002.1|AF170924_1 (AF170924) photosystem II D1 protein [M... 636 0.0 sp|P07826|PSB1_SYNY3 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 612 e-174 gb|AAD34735.1| (AF131887) photosystem Q (B) protein precursor [P... 610 e-174 gb|AAD34734.1| (AF131886) mutant photosystem Q (B) protein precu... 610 e-173 emb|CAA68778.1| (Y00885) D1 protein (AA 1-360) [Synechocystis PC... 604 e-172 gb|AAB61275.1| (U96631) D1 protein, photosystem II [Acorus grami... 601 e-171 sp|P46895|PSBA_PROMA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 600 e-171 dbj|BAA86296.1| (AB027234) photosystem II core 32 kDa protein [G... 590 e-167 gb|AAD44700.1| (AF130033) PSII D1 reaction center protein [Heter... 571 e-162 gb|AAF89983.1|AF206709_1 (AF206709) PSII D1 reaction center prot... 570 e-161 gb|AAF89981.1|AF206707_1 (AF206707) PSII D1 reaction center prot... 570 e-161 gb|AAB61274.1| (U96630) D1 protein, photosystem II [Phoenix dact... 566 e-160 gb|AAF89980.1|AF206706_2 (AF206706) PSII D1 reaction center prot... 563 e-159 dbj|BAA83815.1| (AB025588) psbA [Gonyaulax polyedra] 563 e-159 dbj|BAA83813.1| (AB025586) psbA [Amphidinium carterae] 557 e-157 gb|AAF31417.1|AF206672_1 (AF206672) photosystem II protein D1 [A... 556 e-157 dbj|BAA83816.2| (AB025589) psbA [Alexandrium tamarense] 551 e-156 dbj|BAA83812.1| (AB025585) psbA [Prorocentrum micans] 540 e-152 gb|AAB61276.1| (U96632) D1 protein, photosystem II [Ludisia disc... 527 e-149 dbj|BAA83817.2| (AB025590) psbA [Alexandrium catenella] 520 e-147 gb|AAF89986.1|AF206712_1 (AF206712) PSII D1 reaction center prot... 468 e-131 gb|AAF89984.1|AF206710_1 (AF206710) PSII D1 reaction center prot... 446 e-124 gb|AAD49557.1| (AF107784) PsbA [Trichodesmium sp. IMS101] 433 e-120 pir||S24992 photosystem II protein D1 - common sunflower chlorop... 379 e-104 emb|CAA10627.1| (AJ132264) PSII D1 reaction-centre protein [Skel... 375 e-103 pir||S48682 D1 protein - Spinach 375 e-103 gb|AAA84549.1| (M16899) 32 kDa membrane protein [Pisum sativum] 325 6e-88 sp|Q01366|PSBA_PHAVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 280 2e-74 gb|AAF89985.1|AF206711_1 (AF206711) PSII D1 reaction center prot... 266 3e-70 dbj|BAA96363.1| (AB043963) photosystem II Qb protein [Bruguiera ... 262 6e-69 gb|AAF08827.1| (AF193066) photosystem II Q(B) protein [Bassia sc... 236 2e-61 pir||C31183 photosystem II protein D1 - barley chloroplast (frag... 226 3e-58 gb|AAC16320.1| (AF061287) D1 protein [Senecio vulgaris] 195 8e-49 emb|CAA73828.1| (Y13398) D1 protein [Porphyra linearis] 186 3e-46 emb|CAA75354.1| (Y15074) D1 protein [Haslea ostrearia] 181 1e-44 prf||1006312A protein QB [Solanum nigrum] 178 7e-44 sp|P09192|PSBD_SYNY3 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 174 2e-42 sp|P51766|PSBD_PROHO PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 173 3e-42 pir||S42646 photosystem II protein D2 - Anabaena sp. (strain PCC... 173 3e-42 gi|11467543 PSII, D2 reaction-center protein [Odontella sinensis... 171 1e-41 emb|CAA75405.1| (Y15137) D1 protein [Skeletonema costatum] 170 2e-41 sp|P20898|PSBD_SYNP2 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 170 2e-41 sp|P11005|PSBD_SYNP7 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 170 3e-41 gi|11467390 D2 protein of the photosystem II reaction center cor... 169 5e-41 sp|P28253|PSBD_CYACA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 169 6e-41 gi|11466345 D2 reaction center protein of photosystem II [Mesost... 167 2e-40 gi|11467794 D2 reaction-center protein of photosystem II [Nephro... 167 2e-40 gi|11465589 unknown; Photosystem II D2 protein [Cyanidium caldar... 166 4e-40 gi|7524716 PSII D2 protein [Pinus thunbergii] >gi|1172677|sp|P41... 166 4e-40 gb|AAG26177.1| (AF123821) photosystem II D2 protein [Ginkgo biloba] 165 9e-40 gi|11465823 Photosystem II D2 protein [Porphyra purpurea] >gi|17... 164 2e-39 pir||F2PMD2 photosystem II protein D2 - garden pea chloroplast 164 2e-39 gi|11466698 psbD [Marchantia polymorpha] >gi|131293|sp|P06404|PS... 164 2e-39 gb|AAG44374.1| (AF235043) photosystem II D2 protein [Amborella t... 164 2e-39 gb|AAG26171.1| (AF123818) photosystem II D2 protein [Cercidiphyl... 164 2e-39 gb|AAG26169.1| (AF123817) photosystem II D2 protein [Ceratophyll... 164 2e-39 gi|7524799 photosystem II D2 protein [Chlorella vulgaris] >gi|30... 164 2e-39 gb|AAG26182.1| (AF123823) photosystem II D2 protein [Illicium pa... 163 3e-39 emb|CAA58959.1| (X84154) D2 protein, photosystem II subunit [Ant... 163 3e-39 gi|11465949 PSII D2 protein [Nicotiana tabacum] >gi|131301|sp|P0... 163 3e-39 gb|AAG26167.1| (AF123816) photosystem II D2 protein [Calycanthus... 163 3e-39 sp|P06006|PSBD_PEA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) P... 163 3e-39 prf||1209190A photosystem II protein D2 [Chlamydomonas reinhardtii] 163 3e-39 sp|P06007|PSBD_CHLRE PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 163 3e-39 gb|AAG26186.1| (AF123825) photosystem II D2 protein [Liriodendro... 162 5e-39 gb|AAG26180.1| (AF123822) photosystem II D2 protein [Gnetum gnemon] 162 5e-39 gb|AAG26163.1| (AF123814) photosystem II D2 protein [Asarum cana... 162 6e-39 gb|AAG26161.1| (AF123813) photosystem II D2 protein [Acorus cala... 162 6e-39 gb|AAF82675.1| (AF188854) photosystem II D2 protein [Nymphaea od... 162 6e-39 gi|11467626 PSII D2 reaction-center protein [Guillardia theta] >... 162 6e-39 dbj|BAA83458.1| (AB013682) photosystem II protein D2 [Adiantum c... 162 8e-39 gb|AAD24582.1|AF134324_1 (AF134324) Qa-binding protein PsbD [Pop... 162 8e-39 gi|11497520 PSII D2 protein [Spinacia oleracea] >gi|131297|sp|P0... 162 8e-39 gb|AAG26165.1| (AF123815) photosystem II D2 protein [Cabomba car... 161 1e-38 sp|P11849|PSBD_HORVU PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 161 1e-38 sp|P10803|PSBD_SECCE PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 161 1e-38 gi|7525028 PSII D2 protein [Arabidopsis thaliana] >gi|6685787|sp... 161 1e-38 pir||S00929 photosystem II protein D2 - barley chloroplast >gi|1... 161 2e-38 gi|11466770 PSII D2 protein [Oryza sativa] >gi|131294|sp|P12095|... 161 2e-38 gi|11466982 PSII D2-polypeptide [Euglena gracilis] >gi|400884|sp... 159 5e-38 gb|AAG26173.1| (AF123819) photosystem II D2 protein [Dioscorea b... 159 7e-38 gb|AAF73303.1| (AF188848) photosystem II D2 protein [Zamia furfu... 159 7e-38 emb|CAB67144.1| (AJ271079) PSII D2 protein [Oenothera elata subs... 159 7e-38 dbj|BAA83431.1| (AB013655) photosystem II protein D2 [Physcomitr... 158 9e-38 dbj|BAA83437.1| (AB013661) photosystem II protein D2 [Coleochaet... 158 1e-37 gi|11467176 PSII D2 protein [Zea mays] >gi|1346850|sp|P48184|PSB... 156 3e-37 gb|AAG26175.1| (AF123820) photosystem II D2 protein [Drimys wint... 156 4e-37 dbj|BAA83448.1| (AB013672) photosystem II protein D2 [Sphagnum f... 155 6e-37 gb|AAD10228.1| (U72055) photosystem II protein D1 [Anabaena sp. CA] 155 1e-36 dbj|BAA83453.1| (AB013677) photosystem II protein D2 [Haplomitri... 148 1e-34 dbj|BAA83443.1| (AB013667) photosystem II protein D2 [Anthoceros... 146 5e-34 gb|AAA84105.1| (M19053) thylakoid membrane protein [Chenopodium ... 144 1e-33 sp|P12463|PSBA_WHEAT PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 143 4e-33 gb|AAB29963.1| photosystem II core D1 protein {Ala251Val substit... 114 2e-24 gb|AAB29962.1| photosystem II core D1 protein {Ile248Thr substit... 113 3e-24 pir||S09188 photosystem II 32K protein - spinach (fragments) 103 3e-21 dbj|BAB19668.1| (AB028938) photosynthetic reaction center M subu... 68 1e-10 dbj|BAA34815.1| (AB020599) photosynthetic reaction center L subu... 65 2e-09 dbj|BAA25722.1| (AB011074) photosynthetic reaction center L subu... 64 2e-09 sp|O66141|RCEL_ACIOR REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 64 3e-09 sp|O66139|RCEL_ACIMU REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 64 3e-09 sp|O66137|RCEL_ACICY REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 64 3e-09 dbj|BAA96516.1| (AB035570) L subunit of photosynthetic reaction ... 64 4e-09 dbj|BAA32995.1| (AB015708) photosynthetic reaction center L subu... 64 4e-09 dbj|BAA22646.1| (D50651) photosynthetic reaction center M subuni... 64 4e-09 sp|P11695|RCEL_CHLAU REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 64 4e-09 dbj|BAA22639.1| (D50648) photosynthetic reaction center L subuni... 63 6e-09 dbj|BAA25901.1| (AB010873) photosynthetic reaction center L subu... 62 8e-09 dbj|BAA32999.1| (AB015710) photosynthetic reaction center L subu... 61 2e-08 dbj|BAA32997.1| (AB015709) photosynthetic reaction center L subu... 61 2e-08 dbj|BAA78672.1| (AB027515) photosynthetic reaction center L subu... 61 2e-08 sp|P51763|RCEM_CHRVI REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 61 2e-08 dbj|BAA25903.1| (AB011073) photosynthetic reaction center L subu... 60 4e-08 pir||T10820 photosynthetic reaction center L - Rhodospirillum ph... 60 5e-08 sp|P51750|RCEL_RHOPH REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 60 5e-08 gb|AAA84544.1| (M16865) psbA peptide [Pisum sativum] 60 5e-08 sp|P10718|RCEM_RHORU REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 60 5e-08 dbj|BAA87900.1| (AB018690) photosynthetic reaction center M subu... 59 7e-08 dbj|BAA25551.1| (AB005218) L subunit of photosynthetic reaction ... 59 7e-08 sp|P51761|RCEM_RHOGE REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 59 7e-08 pdb|1EYS|M Chain M, Crystal Structure Of Photosynthetic Reaction... 59 9e-08 gb|AAG42645.1| (AF182374) photosynthetic reaction center M subun... 59 9e-08 dbj|BAA22650.1| (D50653) photosynthetic reaction center M subuni... 59 9e-08 dbj|BAA21083.1| (D50647) photosynthetic reaction center M subuni... 59 1e-07 gb|AAB41577.1| (U51298) photosynthetic reaction center M subunit... 59 1e-07 gb|AAD41904.1|AF159440_2 (AF159440) photosynthetic reaction cent... 58 2e-07 dbj|BAA26098.1| (AB013379) L subunit of photosynthetic reaction ... 58 2e-07 dbj|BAA25791.1| (AB010981) photosynthetic reaction center L subu... 58 2e-07 gb|AAB67247.1| (AF018955) reaction center M subunit [Ectothiorho... 58 2e-07 gb|AAB67246.1| (AF018955) reaction center L subunit [Ectothiorho... 58 2e-07 sp|P11847|RCEM_RHOCA REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 57 4e-07 dbj|BAA77030.1| (AB026182) photosynthetic reaction center M subu... 57 5e-07 dbj|BAA22797.1| (D50654) photosynthetic reaction center L subuni... 57 5e-07 pir||S68239 photosynthetic reaction center chain L, terbutryn-re... 57 5e-07 sp|P51760|RCEL_RHOGE REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 57 5e-07 pdb|1EYS|L Chain L, Crystal Structure Of Photosynthetic Reaction... 56 8e-07 dbj|BAA33002.1| (AB015977) photosynthetic reaction center M subu... 56 8e-07 dbj|BAA32993.1| (AB015707) photosynthetic reaction center L subu... 56 8e-07 dbj|BAA22649.1| (D50653) photosynthetic reaction center L subuni... 55 1e-06 dbj|BAA22645.1| (D50651) photosynthetic reaction center L subuni... 55 1e-06 dbj|BAA76948.1| (AB020784) pufM [Rhodovulum sulfidophilum] 55 1e-06 gb|AAD41903.1|AF159440_1 (AF159440) photosynthetic reaction cent... 55 2e-06 pdb|1DS8|M Chain M, Photosynthetic Reaction Center From Rhodobac... 54 2e-06 pdb|1QOV|M Chain M, Photosynthetic Reaction Center Mutant With A... 54 2e-06 pir||T50761 reaction center protein chain M [imported] - Rhodoba... 54 2e-06 pdb|1AIJ|S Chain S, Photosynthetic Reaction Center From Rhodobac... 54 2e-06 dbj|BAA09314.1| (D50647) photosynthetic reaction center L subuni... 54 2e-06 pdb|1PSS|M Chain M, Photosynthetic Reaction Center (Wild-Type) 54 2e-06 pdb|2RCR|M Chain M, Photosynthetic Reaction Center From (Rhodoba... 54 2e-06 prf||1703253B photosyn reaction center M [Chloroflexus aurantiacus] 54 2e-06 sp|P02953|RCEM_RHOSH REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 54 2e-06 pdb|1E6D|M Chain M, Photosynthetic Reaction Center Mutant With T... 54 3e-06 pdb|1MPS|M Chain M, Photosynthetic Reaction Center Mutant With P... 54 3e-06 sp|P51762|RCEL_CHRVI REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 54 3e-06 dbj|BAA26099.1| (AB013379) M subunit of photosynthetic reaction ... 54 3e-06 dbj|BAA22648.1| (D50652) photosynthetic reaction center M subuni... 54 3e-06 dbj|BAA22643.1| (D50650) photosynthetic reaction center L subuni... 54 3e-06 emb|CAA30070.1| (X07018) psbD gene product (123 AA) [Synechocyst... 54 3e-06 pdb|1E14|M Chain M, Photosynthetic Reaction Center Mutant With P... 53 4e-06 dbj|BAA25790.1| (AB010830) photosynthetic reaction center M subu... 53 4e-06 dbj|BAA25552.1| (AB005218) M subunit of photosynthetic reaction ... 53 4e-06 pdb|1YST|M Chain M, Photosynthetic Reaction Center (Wild Type) 53 4e-06 pir||S24213 reaction center protein chain M - Rhodobacter sphaer... 53 4e-06 sp|P09438|RCEM_CHLAU REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 53 4e-06 dbj|BAA94256.1| (AB031016) photosynthetic reaction center M subu... 53 5e-06 dbj|BAA94252.1| (AB031015) photosynthetic reaction center M subu... 53 5e-06 dbj|BAA25728.1| (AB012060) photosynthetic reaction center M subu... 53 5e-06 sp|O83005|RCEL_RHOPA REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 53 7e-06 dbj|BAB18590.1| (AB043944) photosystem Q(B) protein [Rosa phoeni... 52 1e-05 dbj|BAA78673.1| (AB027515) photosynthetic reaction center M subu... 52 1e-05 dbj|BAA22798.1| (D50654) photosynthetic reaction center M subuni... 52 1e-05 sp|P19057|RCEL_RHOCA REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 52 1e-05 dbj|BAA25902.1| (AB010873) photosynthetic reaction center M subu... 52 2e-05 dbj|BAA25789.1| (AB010830) photosynthetic reaction center L subu... 52 2e-05 dbj|BAA22647.1| (D50652) photosynthetic reaction center L subuni... 52 2e-05 dbj|BAA77029.1| (AB026182) photosynthetic reaction center L subu... 51 2e-05 dbj|BAA22644.1| (D50650) photosynthetic reaction center M subuni... 51 2e-05 dbj|BAA76947.1| (AB020784) pufL [Rhodovulum sulfidophilum] 51 3e-05 dbj|BAB19667.1| (AB028938) photosynthetic reaction center L subu... 50 4e-05 dbj|BAA32550.1| (AB016989) photosynthetic reaction center M subu... 50 4e-05 sp|P10717|RCEL_RHORU REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 50 4e-05 sp|P26279|RCEM_ERYSP REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 50 4e-05 emb|CAA40819.1| (X57597) pufM [Erythrobacter sp.] 50 4e-05 gb|AAF15271.1|AF190379_1 (AF190379) photosystem Q(B) protein [Eu... 50 5e-05 dbj|BAA32996.1| (AB015708) photosynthetic reaction center M subu... 50 5e-05 dbj|BAA32552.1| (AB016990) photosynthetic reaction center M subu... 50 5e-05 dbj|BAA25562.1| (AB005220) M subunit of photosynthetic reaction ... 50 5e-05 gi|7524700 3' flagment of psbA; pseudo [Pinus thunbergii] >gi|12... 50 5e-05 pdb|1PST|M Chain M, Photosynthetic Reaction Center Mutant With H... 50 5e-05 gb|AAF78134.1| (AF129842) PsbA [Cynara cardunculus] 50 6e-05 dbj|BAA94255.1| (AB031016) photosynthetic reaction center L subu... 50 6e-05 dbj|BAA94251.1| (AB031015) photosynthetic reaction center L subu... 50 6e-05 dbj|BAA25727.1| (AB012060) photosynthetic reaction center L subu... 50 6e-05 dbj|BAA25566.1| (AB005222) M subunit of photosynthetic reaction ... 50 6e-05 gb|AAF15263.1|AF190368_1 (AF190368) photosystem Q(B) protein [Lo... 49 8e-05 dbj|BAA25564.1| (AB005221) M subunit of photosynthetic reaction ... 49 8e-05 sp|P51751|RCEM_RHOPH REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 49 8e-05 pdb|1DXR|M Chain M, Photosynthetic Reaction Center From Rhodopse... 49 8e-05 sp|P06010|RCEM_RHOVI REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 49 8e-05 gb|AAF78131.1| (AF129839) PsbA [Carduus nutans] 49 1e-04 dbj|BAA96517.1| (AB035570) M subunit of photosynthetic reaction ... 49 1e-04 dbj|BAA87899.1| (AB018690) photosynthetic reaction center L subu... 49 1e-04 dbj|BAA33000.1| (AB015710) photosynthetic reaction center M subu... 49 1e-04 gb|AAF15268.1|AF190373_1 (AF190373) photosystem Q(B) protein [An... 48 1e-04 gb|AAF15264.1|AF190369_1 (AF190369) photosystem Q(B) protein [My... 48 1e-04 gb|AAD45368.1|AF161593_1 (AF161593) photosynthetic reaction cent... 48 1e-04 dbj|BAA32998.1| (AB015709) photosynthetic reaction center M subu... 48 1e-04 dbj|BAA32549.1| (AB016989) photosynthetic reaction center L subu... 48 1e-04 dbj|BAA22641.1| (D50649) photosynthetic reaction center L subuni... 48 1e-04 sp|P26280|RCEL_ERYSP REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 48 1e-04 dbj|BAA25904.1| (AB011073) photosynthetic reaction center M subu... 48 2e-04 dbj|BAA22640.1| (D50648) photosynthetic reaction center M subuni... 48 2e-04 prf||1308226B photosynthetic reaction center M [Rhodopseudomonas... 48 2e-04 pdb|1DXR|L Chain L, Photosynthetic Reaction Center From Rhodopse... 48 2e-04 gb|AAF78130.1| (AF129838) PsbA [Arctium lappa] >gi|8650251|gb|AA... 48 2e-04 gb|AAD45367.1|AF161592_1 (AF161592) photosynthetic reaction cent... 48 2e-04 gb|AAD45366.1|AF161591_1 (AF161591) photosynthetic reaction cent... 48 2e-04 gb|AAG42644.1| (AF182374) photosynthetic reaction center L subun... 47 4e-04 dbj|BAA32551.1| (AB016990) photosynthetic reaction center L subu... 47 4e-04 dbj|BAA25792.1| (AB010981) photosynthetic reaction center M subu... 47 4e-04 dbj|BAA25723.1| (AB011074) photosynthetic reaction center M sub... 47 4e-04 dbj|BAA22642.1| (D50649) photosynthetic reaction center M subuni... 47 4e-04 gb|AAD45365.1|AF161590_1 (AF161590) photosynthetic reaction cent... 46 5e-04 pdb|6PRC|L Chain L, Photosynthetic Reaction Center From Rhodopse... 46 5e-04 sp|P06009|RCEL_RHOVI REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 46 5e-04 gb|AAF15266.1|AF190371_1 (AF190371) photosystem Q(B) protein [Eu... 46 7e-04 dbj|BAA34816.1| (AB020599) photosynthetic reaction center M subu... 46 7e-04 dbj|BAA33014.1| (AB017041) photosynthetic reaction center L subu... 46 7e-04 dbj|BAA32994.1| (AB015707) photosynthetic reaction center M subu... 46 7e-04 pir||T50760 reaction center protein chain L [imported] - Rhodoba... 46 9e-04 dbj|BAA33015.1| (AB017041) photosynthetic reaction center M subu... 46 9e-04 pdb|1YST|L Chain L, Photosynthetic Reaction Center (Wild Type) 46 9e-04 pdb|1PSS|L Chain L, Photosynthetic Reaction Center (Wild-Type) >... 46 9e-04 pdb|1E14|L Chain L, Photosynthetic Reaction Center Mutant With P... 46 9e-04 sp|P02954|RCEL_RHOSH REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 46 9e-04 gb|AAF78142.1| (AF129850) PsbA [Ptilostemon afer] 45 0.002 gb|AAF15265.1|AF190370_1 (AF190370) photosystem Q(B) protein [Al... 44 0.003 emb|CAB39025.1| (AL034559) hypothetical protein, PFC0885c [Plasm... 37 0.34 pir||T18841 hypothetical protein C01G6.7 - Caenorhabditis elegan... 35 1.3 dbj|BAB21220.1| (AB048211) photosystem Q(B) protein [Rosa stellata] 34 2.3 dbj|BAB02093.1| (AB026655) gb|AAF24841.1~gene_id:MXC7.5~strong s... 34 2.3 gb|AAG59897.1|AF333236_1 (AF333236) photosynthetic reaction cent... 34 3.9 gb|AAF15270.1|AF190377_1 (AF190377) photosystem Q(B) protein [Co... 33 5.1 gi|11467870 subunit 1 of NADH-plastoquinoneoxidoreductase [Nephr... 33 5.1 gb|AAA69162.1| (U28377) probable hydrogenase-2 cytochrome b subu... 33 6.7 gi|5835524 NADH dehydrogenase subunit 5 [Branchiostoma lanceolat... 32 8.7 gi|5881423 NADH dehydrogenase subunit 5 [Branchiostoma floridae]... 32 8.7 >sp|P06585|PSBA_PEA PHOTOSYSTEM Q(B) PROTEIN PRECURSOR (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2PMD1 photosystem II protein D1 precursor - garden pea chloroplast gb|AAA84547.1| (M11005) 34.5 Kd protein [Pisum sativum] Length = 353 Score = 728 bits (1858), Expect = 0.0 Identities = 352/353 (99%), Positives = 353/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERR+SENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRDSENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 >sp|P11848|PSBA_SINAL PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||A21730 photosystem II protein D1 precursor - white mustard chloroplast emb|CAA25093.1| (X00340) pre-M(r)32000 PSII protein [Sinapis alba] Length = 353 Score = 726 bits (1853), Expect = 0.0 Identities = 351/353 (99%), Positives = 353/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE+PSING Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVESPSING 353 >sp|P18290|PSBA_BRANA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) (TRIAZINE-RESISTANCE PROTEIN) gb|AAA84447.1| (M36720) triazine-resistance [Brassica napus] prf||1306442A gene psbA [Brassica napus] Length = 353 Score = 725 bits (1852), Expect = 0.0 Identities = 351/353 (99%), Positives = 352/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYA FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYAGFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 >sp|P02957|PSBA_SOYBN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||FMSY32 photosystem II protein D1 precursor - soybean chloroplast emb|CAA24986.1| (X00152) psb A gene [Glycine max] Length = 353 Score = 725 bits (1852), Expect = 0.0 Identities = 350/353 (99%), Positives = 353/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA++APSING Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIDAPSING 353 >gi|7525013 PSII 32 KDa protein [Arabidopsis thaliana] sp|Q33592|PSBA_ARATH PHOTOSYSTEM Q(B) PROTEIN (32 KDA THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S57265 photosystem II protein D1 precursor - Arabidopsis thaliana chloroplast emb|CAA56270.1| (X79898) psbA [Arabidopsis thaliana] dbj|BAA84365.1| (AP000423) PSII 32 KDa protein [Arabidopsis thaliana] emb|CAB67123.1| (AJ271079) PSII D1 protein [Oenothera elata subsp. hookeri] Length = 353 Score = 725 bits (1851), Expect = 0.0 Identities = 351/353 (99%), Positives = 352/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gi|11465935 PSII 32kd protein [Nicotiana tabacum] ref|NP_054912.1| PSII 32 kD protein [Spinacia oleracea] sp|P02955|PSBA_SPIOL PHOTOSYSTEM Q(B) PROTEIN PRECURSOR (32 KDA THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||FMSP32 photosystem II protein D1 precursor [validated] - spinach chloroplast pir||FMNT3D photosystem II protein D1 precursor - Debney's tobacco chloroplast pir||FMSX3N photosystem II protein D1 precursor - black nightshade chloroplast pir||F2CN1U photosystem II protein D1 precursor - upland cotton chloroplast pir||F2NT1C photosystem II protein D1 precursor - curled-leaved tobacco chloroplast emb|CAA33895.1| (X15885) QB protein (AA 1-353) [Gossypium hirsutum] emb|CAA30817.1| (X08016) psbA polypeptide (AA 1-353) [Nicotiana plumbaginifolia] emb|CAA77338.1| (Z00044) PSII 32kd protein [Nicotiana tabacum] emb|CAA25815.1| (X01651) psbA protein [Solanum nigrum] gb|AAA84687.1| (J01448) psbA protein [Nicotiana debneyi] emb|CAA75027.1| (Y14732) photosystem II D1 protein [Chenopodium rubrum] dbj|BAA76899.1| (AB025939) QB protein [Nicotiana glutinosa] emb|CAB88705.1| (AJ400848) PSII 32 kD protein [Spinacia oleracea] prf||0901310A protein psbA,thylakoid membrane [Spinacia oleracea] Length = 353 Score = 725 bits (1850), Expect = 0.0 Identities = 350/353 (99%), Positives = 352/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353 >sp|P02956|PSBA_AMAHY PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||FMMH32 photosystem II protein D1 precursor - green amaranth chloroplast Length = 353 Score = 724 bits (1849), Expect = 0.0 Identities = 349/353 (98%), Positives = 352/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353 >dbj|BAA76900.1| (AB025940) QB protein [Nicotiana tabacum] Length = 353 Score = 723 bits (1847), Expect = 0.0 Identities = 349/353 (98%), Positives = 352/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYA+FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYATFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353 >sp|P36491|PSBA_POPDE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S42492 photosystem II protein D1 precursor - cottonwood emb|CAA55040.1| (X78204) D1 protein [Populus deltoides] Length = 353 Score = 723 bits (1847), Expect = 0.0 Identities = 350/353 (99%), Positives = 351/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE PS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSTNG 353 >emb|CAA30818.1| (X08017) psbA polypeptide (AA 1-353) [Nicotiana plumbaginifolia] Length = 353 Score = 723 bits (1847), Expect = 0.0 Identities = 349/353 (98%), Positives = 352/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYA+FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYANFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353 >sp|P04998|PSBA_MEDSA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||A25580 photosystem II protein D1 precursor - alfalfa chloroplast emb|CAA28646.1| (X04973) Q(B) polypeptide (AA 1-353) [Medicago sativa] Length = 353 Score = 723 bits (1847), Expect = 0.0 Identities = 350/353 (99%), Positives = 351/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERR+SE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRDSETLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNII GAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIICGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 >sp|Q33282|PSBA_VIGUN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) emb|CAA56907.1| (X80932) photosystem II D1 protein [Vigna unguiculata] Length = 353 Score = 723 bits (1846), Expect = 0.0 Identities = 349/353 (98%), Positives = 352/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFG SLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS+NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAMEAPSVNG 353 >sp|P32036|PSBA_CUSRE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S33912 photosystem II protein D1 precursor - southern Asian dodder chloroplast emb|CAA47847.1| (X67512) D1-protein [Cuscuta reflexa] prf||2113216A psbA gene [Cuscuta reflexa] Length = 353 Score = 723 bits (1846), Expect = 0.0 Identities = 348/353 (98%), Positives = 352/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNI+SGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIVSGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAP+ NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPATNG 353 >sp|P04999|PSBA_PETHY PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||A25579 photosystem II protein D1 precursor - petunia chloroplast emb|CAA28647.1| (X04974) Q(B) polypeptide (AA 1-353) [Petunia x hybrida] Length = 353 Score = 723 bits (1846), Expect = 0.0 Identities = 349/353 (98%), Positives = 352/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITS+ENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSSENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353 >gb|AAD00106.1| (U63020) D1 protein [Magnolia pyramidata] Length = 353 Score = 723 bits (1845), Expect = 0.0 Identities = 350/353 (99%), Positives = 351/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >sp|P10510|PSBA_SECCE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) emb|CAB58232.1| (X13327) herbicide-binding protein D1 [Secale cereale] Length = 353 Score = 722 bits (1843), Expect = 0.0 Identities = 349/353 (98%), Positives = 351/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE PSING Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353 >sp|P04848|PSBA_TOBAC PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||FMNT32 photosystem II protein D1 precursor - common tobacco chloroplast prf||1211235A photosystem II 32kD protein [Nicotiana tabacum] Length = 353 Score = 722 bits (1843), Expect = 0.0 Identities = 349/353 (98%), Positives = 351/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASV EWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVHEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353 >emb|CAA25252.1| (X00616) P32 protein [Nicotiana tabacum] Length = 353 Score = 721 bits (1841), Expect = 0.0 Identities = 349/353 (98%), Positives = 351/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL FL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLDFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353 >gi|11466764 PSII 32kDa protein [Oryza sativa] sp|P12094|PSBA_ORYSA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||FMRZ32 photosystem II protein D1 precursor - rice chloroplast emb|CAA34007.1| (X15901) PSII 32kDa protein [Oryza sativa] gb|AAA84591.1| (M36191) Q-B protein (psbA) [Oryza sativa] prf||1503143A psbA gene [Oryza sativa] prf||1510376A quinone binding protein [Oryza sativa] prf||1603356A photosystem II 32kD protein [Oryza sativa] Length = 353 Score = 721 bits (1841), Expect = 0.0 Identities = 348/353 (98%), Positives = 351/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+E PS+NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAALEVPSLNG 353 >gb|AAA74185.1| (U25659) photosystem II protein D1 [Solanum nigrum] Length = 353 Score = 721 bits (1840), Expect = 0.0 Identities = 348/353 (98%), Positives = 350/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLH L Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHLL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYA FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYAGFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353 >sp|P05337|PSBA_HORVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2BHD1 photosystem II protein D1 precursor - barley chloroplast emb|CAA30763.1| (X07942) psbA protein (AA 1-353) [Hordeum vulgare] emb|CAA30400.1| (X07521) D1 protein (psbA) (AA 1-353) [Hordeum vulgare] gb|AAA84046.1| (M38374) herbicide-binding protein [Hordeum vulgare] Length = 353 Score = 721 bits (1840), Expect = 0.0 Identities = 348/353 (98%), Positives = 351/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE P+ING Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPAING 353 >pir||F2NUD1 photosystem II protein D1 precursor - rye chloroplast Length = 353 Score = 719 bits (1837), Expect = 0.0 Identities = 348/353 (98%), Positives = 350/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA VDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAFVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE PSING Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353 >gi|11467171 PSII 32 KDa protein [Zea mays] sp|P48183|PSBA_MAIZE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S58531 photosystem II protein D1 precursor - maize chloroplast emb|CAA60265.1| (X86563) PSII 32 KDa protein [Zea mays] Length = 353 Score = 718 bits (1832), Expect = 0.0 Identities = 346/353 (98%), Positives = 350/353 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+E P +NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAALEVPYLNG 353 >dbj|BAA82767.1| (AB020584) psbA [Conocephalum conicum] Length = 353 Score = 715 bits (1826), Expect = 0.0 Identities = 343/353 (97%), Positives = 350/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353 >sp|P27201|PSBA_SPIOG PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2DWD1 photosystem II protein D1 precursor - Spirodela oligorhiza chloroplast emb|CAA42156.1| (X59557) D1 protein [Spirodela punctata] Length = 353 Score = 715 bits (1826), Expect = 0.0 Identities = 345/353 (97%), Positives = 349/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LWGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESTSLWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGV CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVRCYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFT+LGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTSLGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS G Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTIG 353 >dbj|BAA82757.1| (AB020574) psbA [Conocephalum conicum] dbj|BAA82758.1| (AB020575) psbA [Conocephalum conicum] dbj|BAA82759.1| (AB020576) psbA [Conocephalum conicum] dbj|BAA82761.1| (AB020578) psbA [Conocephalum conicum] dbj|BAA82762.1| (AB020579) psbA [Conocephalum conicum] dbj|BAA82763.1| (AB020580) psbA [Conocephalum conicum] dbj|BAA82765.1| (AB020582) psbA [Conocephalum conicum] dbj|BAA82766.1| (AB020583) psbA [Conocephalum conicum] dbj|BAA82768.1| (AB020585) psbA [Conocephalum conicum] dbj|BAA82769.1| (AB020586) psbA [Conocephalum conicum] dbj|BAA82771.1| (AB020588) psbA [Conocephalum conicum] dbj|BAA82772.1| (AB020589) psbA [Conocephalum conicum] dbj|BAA82773.1| (AB020602) psbA [Conocephalum conicum] dbj|BAA82774.1| (AB020603) psbA [Conocephalum conicum] dbj|BAA82778.1| (AB020607) psbA [Conocephalum conicum] Length = 353 Score = 714 bits (1824), Expect = 0.0 Identities = 342/353 (96%), Positives = 350/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353 >gi|11466695 psbA [Marchantia polymorpha] sp|P06402|PSBA_MARPO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2LVD1 photosystem II protein D1 precursor - liverwort (Marchantia polymorpha) chloroplast emb|CAA28077.1| (X04465) psbA [Marchantia polymorpha] Length = 353 Score = 713 bits (1821), Expect = 0.0 Identities = 342/353 (96%), Positives = 350/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES ++WGRFC+W+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASIWGRFCDWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353 >dbj|BAA82776.2| (AB020605) psbA [Conocephalum conicum] Length = 353 Score = 713 bits (1820), Expect = 0.0 Identities = 341/353 (96%), Positives = 349/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL AWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLTAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353 >dbj|BAA82764.1| (AB020581) psbA [Conocephalum conicum] dbj|BAA82777.1| (AB020606) psbA [Conocephalum conicum] Length = 353 Score = 712 bits (1818), Expect = 0.0 Identities = 341/353 (96%), Positives = 349/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV IWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVSIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353 >dbj|BAA82760.1| (AB020577) psbA [Conocephalum conicum] Length = 353 Score = 712 bits (1818), Expect = 0.0 Identities = 341/353 (96%), Positives = 349/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTAL ISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALSISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353 >dbj|BAA82779.1| (AB020619) similar to SWISS-PROT:p06402 [Conocephalum conicum] dbj|BAA82780.1| (AB020620) similar to SWESS-PROT:p06402 [Conocephalum conicum] Length = 353 Score = 712 bits (1817), Expect = 0.0 Identities = 340/353 (96%), Positives = 349/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGI+TM FNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGINTMGFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353 >dbj|BAA82770.1| (AB020587) psbA [Conocephalum conicum] dbj|BAA82775.2| (AB020604) psbA [Conocephalum conicum] Length = 353 Score = 711 bits (1815), Expect = 0.0 Identities = 341/353 (96%), Positives = 349/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES ++WGRFCNW+TSTENRL IGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLNIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353 >dbj|BAA82782.1| (AB020622) similar to SWISS-PROT:p06402 [Dumortiera hirsuta] Length = 353 Score = 711 bits (1814), Expect = 0.0 Identities = 341/353 (96%), Positives = 349/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES ++WGRFCNW+TSTENRL IGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLNIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QE+ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEQETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353 >sp|P13910|PSBA_VICFA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2VFD1 photosystem II protein D1 precursor - fava bean chloroplast emb|CAA35688.1| (X17694) Q-B protein (AA 1-353) [Vicia faba] Length = 353 Score = 711 bits (1814), Expect = 0.0 Identities = 343/353 (97%), Positives = 348/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERR+S NLWGRFCNWIT+TENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRDSHNLWGRFCNWITTTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSA IGLHFYPIWEAASVD+WLY GGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAVIGLHFYPIWEAASVDDWLYIGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWI VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIVVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAM GSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMQGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAV+APSI+G Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVDAPSISG 353 >emb|CAA04456.1| (AJ001003) 32 kD PSII D1 protein [Picea abies] Length = 353 Score = 710 bits (1813), Expect = 0.0 Identities = 343/353 (97%), Positives = 348/353 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAI+ERRES NLWGRFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAIIERRESANLWGRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTEN+SAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENQSANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV GIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVAGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE+ SI G Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVESISIGG 353 >sp|P50155|PSBA_PICAB PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S44245 photosystem II protein D1 precursor - Norway spruce emb|CAA55629.1| (X78995) D1 protein [Picea abies] Length = 353 Score = 708 bits (1807), Expect = 0.0 Identities = 342/353 (96%), Positives = 347/353 (97%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAI+ERRES NLWGRFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAIIERRESANLWGRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTEN+SAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENQSANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV GIWFTALGISTMA NLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVAGIWFTALGISTMALNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE+ SI G Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVESISIGG 353 >gi|7524753 PSII 32kDa protein [Pinus thunbergii] sp|P24684|PSBA_PINCO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S15957 photosystem II protein D1 precursor - shore pine chloroplast pir||S29327 photosystem II protein D1 precursor - Japanese black pine chloroplast emb|CAA37757.1| (X53721) D1 protein of photosystem II [Pinus contorta] emb|CAA37758.1| (X53722) D1 protein of photosystem II [Pinus contorta] emb|CAA40381.1| (X57097) D1 protein of photosystem II [Pinus contorta] emb|CAA40383.1| (X57097) D1 protein of photosystem II [Pinus contorta] dbj|BAA02024.1| (D11467) photosystem II D1 protein [Pinus thunbergii] dbj|BAA04462.1| (D17510) PSII 32kDa protein [Pinus thunbergii] Length = 353 Score = 708 bits (1807), Expect = 0.0 Identities = 342/353 (96%), Positives = 347/353 (97%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAI+ERRES NLW RFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAIIERRESANLWSRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTEN+SAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENQSANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV GIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVAGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE+ SI G Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVESISIGG 353 >dbj|BAA82781.1| (AB020621) similar to SWISS-PROT:p06402 [Conocephalum supradecompositum] Length = 353 Score = 705 bits (1800), Expect = 0.0 Identities = 338/353 (95%), Positives = 347/353 (97%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES ++WGRFCNW+TSTE RLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASIWGRFCNWVTSTETRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRAN GMEVMHERNAHNFP +LAA+EAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANPGMEVMHERNAHNFPPNLAAIEAPAVNG 353 >gb|AAK11251.1|AF329007_1 (AF329007) PSII D1 protein [Prunus x yedoensis] Length = 353 Score = 703 bits (1794), Expect = 0.0 Identities = 342/353 (96%), Positives = 346/353 (97%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFI+A IAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIMALIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIIS AIIPTSAAIGLHFYPIWEAASVDEWLY+GGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGLHFYPIWEAASVDEWLYDGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACY GRE ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYRGRELELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN+G RFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANDGSRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLFFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gb|AAG60680.1|AF315340_1 (AF315340) PSII D1 protein [Prunus sargentii] Length = 353 Score = 702 bits (1791), Expect = 0.0 Identities = 342/353 (96%), Positives = 344/353 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIR PVSGSLLYGNNIIS AIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIRVPVSGSLLYGNNIISRAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHG LVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGPLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYN VAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF +NGF Sbjct: 241 QEEETYNFVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFFINGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gb|AAG60679.1|AF315339_1 (AF315339) PSII D1 protein [Prunus x yedoensis] Length = 353 Score = 702 bits (1791), Expect = 0.0 Identities = 342/353 (96%), Positives = 345/353 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFI+A IAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIMALIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLY+GGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYDGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGRE ELSFRLGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGRELELSFRLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL RETTENESANEG RFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLTRETTENESANEGSRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gb|AAG60681.1|AF315341_1 (AF315341) PSII D1 protein [Prunus serrulata var. quelpaertensis] Length = 353 Score = 700 bits (1788), Expect = 0.0 Identities = 342/353 (96%), Positives = 343/353 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMI TLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIATLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACY GRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYRGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIV AHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVPAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gi|7524765 photosystem II D1 protein [Chlorella vulgaris] sp|P56318|PSBA_CHLVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||T07195 photosystem II protein D1 - Chlorella vulgaris chloroplast dbj|BAA57842.1| (AB001684) photosystem II D1 protein [Chlorella vulgaris] Length = 353 Score = 700 bits (1788), Expect = 0.0 Identities = 335/353 (94%), Positives = 344/353 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LW RFC W+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESASLWARFCEWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTS AIGLHFYPIWEAAS+DEWLYNGGPY+LIV HF Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLIVCHFF 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LG+ YMGREWELSFRLGMRPWIAVAYSAPVAAATAVF+IYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGICSYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA VEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAVVEAPAVNG 353 >gb|AAK11250.1|AF329006_1 (AF329006) PSII D1 protein [Prunus x yedoensis] Length = 353 Score = 699 bits (1785), Expect = 0.0 Identities = 340/353 (96%), Positives = 345/353 (97%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFI+A IAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIMALIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIIS AIIPTSAAIGLHFYPIWEAASVDEWLY+GGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGLHFYPIWEAASVDEWLYDGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACY GRE ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYRGRELELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRE TENE+AN+G RFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIREPTENETANDGSRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLFFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gb|AAK11253.1|AF329009_1 (AF329009) PSII D1 protein [Prunus x yedoensis] Length = 353 Score = 698 bits (1783), Expect = 0.0 Identities = 342/353 (96%), Positives = 343/353 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEG RFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGSRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF NGF Sbjct: 241 QEEETYNIVAAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFFKNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gb|AAG60670.1|AF314009_1 (AF314009) PSII D1 protein [Prunus x yedoensis] Length = 353 Score = 698 bits (1783), Expect = 0.0 Identities = 342/353 (96%), Positives = 343/353 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIIS AIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACY GRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYRGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEG RFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGSRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF NGF Sbjct: 241 QEEETYNIVAAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFFKNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gb|AAK11252.1|AF329008_1 (AF329008) PSII D1 protein [Prunus x yedoensis] Length = 353 Score = 697 bits (1780), Expect = 0.0 Identities = 341/353 (96%), Positives = 343/353 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFI+AFIAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIMAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEG RFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGSRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF NGF Sbjct: 241 QEEETYNIVAAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFFKNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gb|AAG60671.1|AF314010_1 (AF314010) PSII D1 protein [Prunus x yedoensis] Length = 353 Score = 697 bits (1780), Expect = 0.0 Identities = 339/353 (96%), Positives = 344/353 (97%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFI+A IAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIMALIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLY+GGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYDGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGRE ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGRELELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL RE TENE+AN+G RFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLTREPTENETANDGSRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLFFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gb|AAK11254.1|AF329010_1 (AF329010) PSII D1 protein [Prunus x yedoensis] Length = 353 Score = 696 bits (1776), Expect = 0.0 Identities = 341/353 (96%), Positives = 342/353 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIA IAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIALIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACY GRE ELSF LGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYRGRELELSFPLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEG RFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGSRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF NGF Sbjct: 241 QEEETYNIVAAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFFKNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >sp|P35860|PSBA_CHLEL PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S14137 photosystem II protein D1 - Chlorella ellipsoidea chloroplast emb|CAA44621.1| (X62800) chloroplast Q-B binding protein [Chlorella ellipsoidea] Length = 352 Score = 695 bits (1773), Expect = 0.0 Identities = 332/351 (94%), Positives = 341/351 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LW RFC WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESASLWARFCEWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSG LLYGNNIISGA++PTS AIGLHFYPIWEAAS+DEWLYNGGPY+LIV HF Sbjct: 61 DGIREPVSGYLLYGNNIISGAVVPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLIVCHFF 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LG+ CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVF+IYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGICCYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENES N GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESRNAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSI 351 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA+VEAPSI Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEAPSI 351 >sp|P09752|PSBA_CHLMO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2KM1M photosystem II protein D1 precursor - Chlamydomonas moewusii chloroplast emb|CAA31841.1| (X13486) D1 protein [Chlamydomonas moewusii] emb|CAA33622.1| (X15601) 32 kilodalton thylakoid membrane protein D1 or Q(B) [Chlamydomonas moewusii] Length = 353 Score = 693 bits (1770), Expect = 0.0 Identities = 329/352 (93%), Positives = 341/352 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LW RFC WITSTENR+YIGWFGV+MIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESTSLWARFCEWITSTENRIYIGWFGVIMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGA+IPTS AIGLHFYPIWEAAS+DEWLYNGGPY+LIV HF Sbjct: 61 DGIREPVSGSLLYGNNIISGAVIPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLIVCHFF 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVF+IYPIGQGSFSDGMPLGISGTF Sbjct: 121 IGICCYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGLSTMAFNLNGL 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSIN 352 NFNQSVVDS GRV+NTWADIINRANLGMEVMHERNAHNFPLDLAA EAPSIN Sbjct: 301 NFNQSVVDSNGRVLNTWADIINRANLGMEVMHERNAHNFPLDLAAFEAPSIN 352 >gi|11467759 D1 reaction-center protein of photosystem II [Nephroselmis olivacea] gb|AAD54781.1|AF137379_4 (AF137379) D1 reaction-center protein of photosystem II [Nephroselmis olivacea] Length = 353 Score = 693 bits (1769), Expect = 0.0 Identities = 331/353 (93%), Positives = 345/353 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES ++W RFC+W+TSTENRLYIGWFGVLMIP LLTATSVFII FIAAPPVDI Sbjct: 1 MTAILERRESTSVWARFCDWVTSTENRLYIGWFGVLMIPLLLTATSVFIIGFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLL+GNNIISGAIIP+SAAIG+HFYPIWEAAS+DEWLYNGG YELIVLHFL Sbjct: 61 DGIREPVSGSLLFGNNIISGAIIPSSAAIGIHFYPIWEAASIDEWLYNGGCYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV IWFTALG+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVCIWFTALGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA+V+AP++ G Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVDAPAVQG 353 >gb|AAG60682.1|AF315342_1 (AF315342) PSII D1 protein [Prunus subhirtella var. ascendens] Length = 353 Score = 689 bits (1759), Expect = 0.0 Identities = 336/353 (95%), Positives = 339/353 (95%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRESE+LWGRFC WITSTENRLYIGWFGVLMIPTLLTATSVFIIA IAAPPVDI Sbjct: 1 MTAILERRESESLWGRFCKWITSTENRLYIGWFGVLMIPTLLTATSVFIIALIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIIS AIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACY GRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYRGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQA+HNILMHPFHMLGVAGVFGGSLFSAMHGS T SL RETTENESANEGYRFG Sbjct: 181 NFMIVFQADHNILMHPFHMLGVAGVFGGSLFSAMHGSRGTPSLTRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEET+NIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF Sbjct: 241 QEEETHNIVAAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIIN ANLGMEVMHERNAHNFPLDLAAVEAPS NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINHANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353 >gi|11466347 D1 reaction center protein of photosystem II [Mesostigma viride] gb|AAF43791.1|AF166114_3 (AF166114) D1 reaction center protein of photosystem II [Mesostigma viride] Length = 353 Score = 689 bits (1758), Expect = 0.0 Identities = 327/353 (92%), Positives = 342/353 (96%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES NLWGRFC +ITSTENRLYIGWFGV+MIP LLTA SV+IIAF+AAPPVDI Sbjct: 1 MTATLERRESANLWGRFCEFITSTENRLYIGWFGVIMIPCLLTAISVYIIAFVAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISG++IP S AIGLHFYPIWEAAS+DEWLYNGGPY ++V HFL Sbjct: 61 DGIREPVSGSLLYGNNIISGSVIPMSNAIGLHFYPIWEAASLDEWLYNGGPYLMVVCHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LG+ACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGIACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA WPVVGIWFTA+GISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAVWPVVGIWFTAMGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA+VEAP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEAPAVNG 353 >sp|P07753|PSBA_CHLRE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||A22780 photosystem II protein D1 - Chlamydomonas reinhardtii chloroplast emb|CAA25670.1| (X01424) herbicide binding protein [Chlamydomonas reinhardtii] prf||1102190A protein psbA [Chlamydomonas reinhardtii] Length = 352 Score = 688 bits (1755), Expect = 0.0 Identities = 327/352 (92%), Positives = 341/352 (95%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRE+ +LW RFC WITSTENRLYIGWFGV+MIP LLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRENSSLWARFCEWITSTENRLYIGWFGVIMIPCLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNII+GA+IPTS AIGLHFYPIWEAAS+DEWLYNGGPY+LIV HFL Sbjct: 61 DGIREPVSGSLLYGNNIITGAVIPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLIVCHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGV CYMGREWELSFRLGMRPWIAVAYSAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVYCYMGREWELSFRLGMRPWIAVAYSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGLSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSIN 352 NFNQSVVDSQGRV+NTWADIINRANLGMEVMHERNAHNFPLDLA+ + S N Sbjct: 301 NFNQSVVDSQGRVLNTWADIINRANLGMEVMHERNAHNFPLDLASTNSSSNN 352 >gb|AAC99848.1| (U28165) photosystem II core 32 kDa protein [Palmaria palmata] Length = 360 Score = 669 bits (1707), Expect = 0.0 Identities = 318/360 (88%), Positives = 340/360 (94%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES +LW RFC WITSTENRLYIGWFGV+MIPTLLTATSVFIIAF+AAPPVDI Sbjct: 1 MTATLERRESASLWERFCTWITSTENRLYIGWFGVVMIPTLLTATSVFIIAFVAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGAIIP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+LIVLHFL Sbjct: 61 DGIREPVAGSLLYGNNIISGAIIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGV CY+GREWELS+RLGMRPWI+VA++APVAAA AVFL+YPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVCCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL AWPVVGIW T++ +STMA NLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGAWPVVGIWLTSMSVSTMALNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQSVVDSQGRVINTWADI+NRANLGMEVMHERNAHNFPLDLA A+ APSING Sbjct: 301 NFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASGDSCPVALVAPSING 360 >gi|11465678 Photosystem II Q(b) protein (D1) [Porphyra purpurea] sp|P51212|PSBA_PORPU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S73133 photosystem II protein D1 (psbA) - red alga (Porphyra purpurea) chloroplast gb|AAC08098.1| (U38804) Photosystem II Q(b) protein (D1) [Porphyra purpurea] Length = 360 Score = 667 bits (1703), Expect = 0.0 Identities = 316/360 (87%), Positives = 340/360 (93%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA L+RRES +LW RFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAF+AAPPVDI Sbjct: 1 MTATLQRRESASLWERFCSWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFVAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGA+IP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+L+VLHFL Sbjct: 61 DGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLVVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 GVACY+GREWELS+RLGMRPWI+VA++APVAAA AVFL+YPIGQGSFSDGMPLGISGTF Sbjct: 121 TGVACYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSLIRET+ENESAN Y+FG Sbjct: 181 NFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETSENESANYAYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL WPVVGIW TAL +STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGLWPVVGIWLTALSVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA A+ AP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASGESLPVALTAPAVNG 360 >gi|11467381 D1 protein of the photosystem II reaction center core heterodimer [Cyanophora paradoxa] sp|P12719|PSBA_CYAPA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) gb|AAA81269.1| (U30821) D1 protein of the photosystem II reaction center core heterodimer [Cyanophora paradoxa] Length = 360 Score = 665 bits (1697), Expect = 0.0 Identities = 318/359 (88%), Positives = 338/359 (93%), Gaps = 7/359 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LER S +LW +FC +ITSTENRLYIGWFGVLM P LLTAT++FIIAF+AAPPVDI Sbjct: 1 MTATLERNASVSLWEQFCGFITSTENRLYIGWFGVLMFPLLLTATTLFIIAFVAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSL YGNNIISGA+IP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+ +V+HFL Sbjct: 61 DGIREPVAGSLFYGNNIISGAVIPSSAAIGMHFYPIWEAASLDEWLYNGGPYQFVVMHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFHM+GVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHMMGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA WPVVGIWFTALG+STMAFNLNG Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLALWPVVGIWFTALGLSTMAFNLNGL 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSIN 352 NFNQSVVDSQGRVI+TWADIINRANLGMEVMHERNAHNFPLDLA A+ APSIN Sbjct: 301 NFNQSVVDSQGRVISTWADIINRANLGMEVMHERNAHNFPLDLASGEVMPVALTAPSIN 359 >sp|P04997|PSB2_SYNP7 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||B25362 photosystem II protein D1-II precursor - Synechococcus sp emb|CAA28292.1| (X04617) Q(B) protein (AA 1-360) [Synechococcus PCC6301] emb|CAA28293.1| (X04618) Q(B) protein (AA 1-360) [Synechococcus PCC6301] Length = 360 Score = 665 bits (1697), Expect = 0.0 Identities = 313/360 (86%), Positives = 337/360 (92%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L+RRES +LW +FC W+TST+NRLY+GWFGVLMIPTLLTAT FI+AFIAAPPVDI Sbjct: 1 MTTALQRRESASLWQQFCEWVTSTDNRLYVGWFGVLMIPTLLTATICFIVAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V HFL Sbjct: 61 DGIREPVAGSLMYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +GV CYMGREWELS+RLGMRPWI VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 IGVFCYMGREWELSYRLGMRPWICVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG Sbjct: 181 NFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFT+LGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTSLGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353 NFNQSV+DSQGRVINTWAD++NRANLGMEVMHERNAHNFPLDLAA E AP+ING Sbjct: 301 NFNQSVLDSQGRVINTWADVLNRANLGMEVMHERNAHNFPLDLAAGEATPVALTAPAING 360 >sp|Q32389|PSBA_HETCA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) gb|AAA57555.1| (U18090) D1 protein [Heterosigma carterae] Length = 360 Score = 664 bits (1694), Expect = 0.0 Identities = 318/360 (88%), Positives = 341/360 (94%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES +LW RFC+WITSTENRLYIGWFGVLMIPTLLTATS +IIAFIAAPPVDI Sbjct: 1 MTATLERRESFSLWERFCSWITSTENRLYIGWFGVLMIPTLLTATSCYIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSL+YGNNII+GA+IP+S AIG+HFYPIWEAAS+DEWLYNGGPY+LIVLHFL Sbjct: 61 DGIREPVAGSLMYGNNIITGAVIPSSNAIGVHFYPIWEAASLDEWLYNGGPYQLIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVA YMGREWELS+RLGMRPWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSLIRET+E ESAN GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEIESANYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIW TALG+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQSVVDSQGRVINTWADIINRA+LGMEVMHERNAHNFPLDLA AV AP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEVLPVAVNAPAVNG 360 >sp|P15191|PSBA_PROHO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2MWD1 photosystem II protein D1 precursor - Prochlorothrix hollandica emb|CAA32489.1| (X14308) D1 protein (AA 1 - 353) [Prochlorothrix hollandica] emb|CAA32665.1| (X14523) PsbA I protein (AA 1-353) [Prochlorothrix hollandica] prf||1503231A psbA gene [Prochlorothrix hollandica] Length = 353 Score = 663 bits (1693), Expect = 0.0 Identities = 309/353 (87%), Positives = 335/353 (94%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L +RES N W +FC WI STENRLY+GWFGV+MIPTLLTAT FIIAFIAAPPVDI Sbjct: 1 MTTALRQRESANAWEQFCQWIASTENRLYVGWFGVIMIPTLLTATICFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V HFL Sbjct: 61 DGIREPVAGSLMYGNNIISGAVVPSSNAIGLHFYPIWEAASMDEWLYNGGPYQLVVFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ CYMGREWELS+RLGMRPWI VAYSAPVAAATAVFLIYP+GQGSFSDGMPLGISGTF Sbjct: 121 IGIFCYMGREWELSYRLGMRPWICVAYSAPVAAATAVFLIYPLGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RET+ENES N GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETSENESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIWFT+LGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWFTSLGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 NFNQSV+DSQGRVI+TWADI+NRANLG EVMHERNAHNFPLDLAAV+APSI G Sbjct: 301 NFNQSVMDSQGRVISTWADILNRANLGFEVMHERNAHNFPLDLAAVKAPSIIG 353 >sp|P31694|PSB2_ANASP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2AI17 photosystem II protein D1 precursor - Anabaena sp. (strain PCC 7120) gb|AAA63703.1| (U21332) D1 form II [Anabaena sp.] gb|AAA63704.1| (U21333) D1 form II [Anabaena sp.] gb|AAA63705.1| (U21334) D1 form II [Anabaena sp.] Length = 360 Score = 663 bits (1692), Expect = 0.0 Identities = 310/360 (86%), Positives = 337/360 (93%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA L++R+S N+W +FC WITST NRLYIGWFGVLMIPTLL AT+ FIIAFIAAPPVDI Sbjct: 1 MTATLQQRKSANVWEQFCEWITSTNNRLYIGWFGVLMIPTLLAATTCFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL Sbjct: 61 DGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 GV CY+GREWELS+RLGMRPWI +A+SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 TGVFCYLGREWELSYRLGMRPWICLAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTENES N GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTENESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR LHFFLAAWPV+GIWFTALG+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRQLHFFLAAWPVIGIWFTALGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQS++DSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA A+ AP+ING Sbjct: 301 NFNQSIIDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAGEVAPVAISAPAING 360 >pir||F2KTD1 photosystem II protein D1 precursor - Cyanophora paradoxa cyanelle emb|CAA32795.1| (X14667) psbA protein (AA 1-360) [Cyanophora paradoxa] Length = 360 Score = 663 bits (1692), Expect = 0.0 Identities = 317/359 (88%), Positives = 337/359 (93%), Gaps = 7/359 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LER S +LW +FC +ITSTENRLYIGWFGVLM P LLTAT++FIIAF+AAPPVDI Sbjct: 1 MTATLERNASVSLWEQFCGFITSTENRLYIGWFGVLMFPLLLTATTLFIIAFVAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSL YGNNIISGA+IP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+ +V+HFL Sbjct: 61 DGIREPVAGSLFYGNNIISGAVIPSSAAIGMHFYPIWEAASLDEWLYNGGPYQFVVMHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFHM+GVAGVFGGSLFSAMHGSLVTSSLIRETTENES N GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHMMGVAGVFGGSLFSAMHGSLVTSSLIRETTENESLNAGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA WPVVGIWFTALG+STMAFNLNG Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLALWPVVGIWFTALGLSTMAFNLNGL 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSIN 352 NFNQSVVDSQGRVI+TWADIINRANLGMEVMHERNAHNFPLDLA A+ APSIN Sbjct: 301 NFNQSVVDSQGRVISTWADIINRANLGMEVMHERNAHNFPLDLASGEVMPVALTAPSIN 359 >gi|11467479 PSII, D1 reaction-center protein [Odontella sinensis] sp|P49460|PSBA_ODOSI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S78284 photosystem II protein D1 - Odontella sinensis chloroplast emb|CAA91657.1| (Z67753) PSII, D1 reaction-center protein [Odontella sinensis] Length = 360 Score = 663 bits (1691), Expect = 0.0 Identities = 316/360 (87%), Positives = 337/360 (92%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRE +LW RFC WITSTENRLYIGWFG LM PTLLTATS +IIAFIAAPPVDI Sbjct: 1 MTATLERREGVSLWERFCAWITSTENRLYIGWFGCLMFPTLLTATSCYIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGA+IP+S AIG+HFYPIWEAAS+DEWLYNGGPY+LIVLHFL Sbjct: 61 DGIREPVAGSLLYGNNIISGAVIPSSNAIGMHFYPIWEAASIDEWLYNGGPYQLIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVA YMGREWELS+RLGMRPWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSLIRETTENES N GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIW TA+G+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTAMGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQSVVDSQGRVINTWADIINRA+LGMEVMHERNAHNFPLDLA A+ AP++NG Sbjct: 301 NFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGDVLPVALNAPAVNG 360 >sp|P24625|PSBA_ANTSP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S32577 photosystem II protein D1 precursor - red alga (Antithamnion sp.) emb|CAA39049.1| (X55364) D1 protein [Antithamnion sp.] Length = 360 Score = 660 bits (1684), Expect = 0.0 Identities = 313/360 (86%), Positives = 335/360 (92%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES +LW RFC WIT ENRLYIGWFGV+MIPTLLTATSVFIIA AAPPVDI Sbjct: 1 MTATLERRESASLWARFCTWITMNENRLYIGWFGVVMIPTLLTATSVFIIACFAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGAIIP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+LIVLHFL Sbjct: 61 DGIREPVAGSLLYGNNIISGAIIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGV CY+GREWE S+RLGMRPWI+VA++APV AA+AVFL+YPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVCCYIGREWEFSYRLGMRPWISVAFTAPVVAASAVFLVYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHP H LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMLVFQAEHNILMHPLHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL WPVVGIWFT++ +STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGLWPVVGIWFTSMSVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQSVVDSQGRVINTWADI+NRANLGMEVMHERNAHNFPLDLA A+ AP+ING Sbjct: 301 NFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASNESLPLALVAPAING 360 >sp|P29270|PSBA_ANAAZ PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2AI1Z photosystem II protein D1 precursor - Anabaena azollae emb|CAA45515.1| (X64174) D1 protein [Anabaena azollae] Length = 360 Score = 659 bits (1683), Expect = 0.0 Identities = 307/360 (85%), Positives = 336/360 (93%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L++R + N+W RFC WITSTENR+YIGWFGVLMIPTL++A + F+IAFIAAPPVDI Sbjct: 1 MTTTLQQRSTANVWDRFCEWITSTENRIYIGWFGVLMIPTLVSAIACFVIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL Sbjct: 61 DGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +GVACY+GREWELS+RLGMRPWI VA+SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 IGVACYLGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQS++DSQGRVI TWAD+INRANLGMEVMHERNAHNFPLDLA A+ AP ING Sbjct: 301 NFNQSIIDSQGRVIGTWADVINRANLGMEVMHERNAHNFPLDLAAGDVAPVALTAPPING 360 >sp|P35876|PSB1_SYNEN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) dbj|BAA03263.1| (D14325) D1 protein [Synechococcus elongatus] Length = 360 Score = 659 bits (1682), Expect = 0.0 Identities = 309/360 (85%), Positives = 334/360 (91%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L+RRES NLW RFCNW+TST+NRLY+GWFGV+MIPTLL AT F+IAFIAAPPVDI Sbjct: 1 MTTTLQRRESANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNII+GA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+LI+ HFL Sbjct: 61 DGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LG +CYMGR+WELS+RLGMRPWI VAYSAP+A+A AVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGASCYMGRQWELSYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFH LGVAGVFGG+LF AMHGSLVTSSLIRETTE ESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVG+WFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGVWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353 NFN SV+D++G VINTWADIINRANLGMEVMHERNAHNFPLDLA+ E APSING Sbjct: 301 NFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLASAESAPVAMIAPSING 360 >gb|AAF37850.1|AF227740_1 (AF227740) photosystem II subunit core 32 kD protein D1 [Vaucheria litorea] Length = 360 Score = 659 bits (1681), Expect = 0.0 Identities = 314/347 (90%), Positives = 334/347 (95%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES +LW RFC+WITST+NRLYIGWFGVLMIPTLLTAT+ +IIAFIAAPPVDI Sbjct: 1 MTATLERRESISLWERFCSWITSTDNRLYIGWFGVLMIPTLLTATTCYIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGA+IP+S AIG+HFYPIWEAASVDEWLYNGGPY+LIVLHFL Sbjct: 61 DGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVA YMGREWELS+RLGMRPWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSLIRET+E ES N GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESTNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIW TALG+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347 NFNQSVVDSQGRVINTWADIINRA+LGMEVMHERNAHNFPLDLAA E Sbjct: 301 NFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLAAGE 347 >sp|P46242|PSB1_ANASP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) gb|AAB59998.1| (U21331) D1 form I [Anabaena sp.] Length = 360 Score = 659 bits (1681), Expect = 0.0 Identities = 307/360 (85%), Positives = 335/360 (92%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L++R S N+W RFC WITSTENR+Y+GWFGVLMIPTLL AT FIIAF+AAPPVDI Sbjct: 1 MTTTLQQRSSANVWERFCTWITSTENRIYVGWFGVLMIPTLLAATVCFIIAFVAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL Sbjct: 61 DGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G ACY+GR+WELS+RLGMRPWI VAYSAP+A+ATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 IGCACYLGRQWELSYRLGMRPWICVAYSAPLASATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEIESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR LHFFLAAWPV+GIWFTALG+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRQLHFFLAAWPVIGIWFTALGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353 NFNQS++DSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA E AP+ING Sbjct: 301 NFNQSIIDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAGEVAPVALTAPAING 360 >pir||S26586 photosystem II protein D1 precursor - Synechococcus sp emb|CAA78895.1| (Z16081) D1-protein [Synechococcus elongatus] prf||2005436A photosystem II D-1 protein [Synechococcus elongatus] Length = 360 Score = 658 bits (1679), Expect = 0.0 Identities = 308/360 (85%), Positives = 334/360 (92%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L+RRES NLW RFCNW+TST+NRLY+GWFGV+MIPTLL AT F+IAFIAAPPVDI Sbjct: 1 MTTTLQRRESANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNII+GA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+LI+ HFL Sbjct: 61 DGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LG +CYMGR+WEL++RLGMRPWI VAYSAP+A+A AVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGASCYMGRQWELTYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFH LGVAGVFGG+LF AMHGSLVTSSLIRETTE ESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVG+WFTALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGVWFTALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353 NFN SV+D++G VINTWADIINRANLGMEVMHERNAHNFPLDLA+ E APSING Sbjct: 301 NFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLASAESAPVAMIAPSING 360 >sp|P07063|PSBA_FREDI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||A20978 photosystem II protein D1 precursor - Calothrix sp gb|AAA24891.1| (K02074) photosystem II B protein (ps2B) [Fremyella diplosiphon] prf||1006290A protein B photosystem II [Fremyella sp.] Length = 360 Score = 656 bits (1675), Expect = 0.0 Identities = 307/360 (85%), Positives = 335/360 (92%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L++R ++W RFC WITSTENR+YIGWFGVLMIPTLL AT+ F+IAFIAAPPVDI Sbjct: 1 MTTTLQQRSRASVWDRFCEWITSTENRIYIGWFGVLMIPTLLAATACFVIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL Sbjct: 61 DGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LG ACY+GR+WELS+RLGMRPWI VAYSAP+A+ATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGCACYLGRQWELSYRLGMRPWICVAYSAPLASATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNIL+HPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG Sbjct: 181 NFMIVFQAEHNILLHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALG+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353 NFNQSV+DSQGRVI TWAD+INRANLGMEVMHERNAHNFPLDLAA E AP+ING Sbjct: 301 NFNQSVIDSQGRVIATWADVINRANLGMEVMHERNAHNFPLDLAAGEVAPVALTAPAING 360 >gi|11467647 PSII D1 reaction-center protein [Guillardia theta] sp|O78446|PSBA_GUITH PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) gb|AAC35633.1| (AF041468) PSII D1 reaction-center protein [Guillardia theta] Length = 360 Score = 655 bits (1672), Expect = 0.0 Identities = 309/348 (88%), Positives = 335/348 (95%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES +LW RFC+WITSTENRLYIGWFGVLMIPTLLTAT+VFIIAFIAAPPVDI Sbjct: 1 MTATLERRESASLWERFCSWITSTENRLYIGWFGVLMIPTLLTATTVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNII+GA+IP+SA+IG+HFYPIWEAAS+DEWLYNGGPY+LIV HFL Sbjct: 61 DGIREPVAGSLLYGNNIITGAVIPSSASIGIHFYPIWEAASLDEWLYNGGPYQLIVDHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGV ++GREWE S+RLGMRPWI+VA++APVAAA+AVFL+YPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVCGWIGREWEFSYRLGMRPWISVAFTAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL WPVVGIWFTALGI TMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVVGIWFTALGIMTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEA 348 NFNQSVVDSQGRVINTWADI+NRANLG+EVMHERNAHNFPLDLA+ E+ Sbjct: 301 NFNQSVVDSQGRVINTWADILNRANLGIEVMHERNAHNFPLDLASGES 348 >gi|11465541 unknown; Photosystem II Q(b) protein (D1) [Cyanidium caldarium] pir||T11963 Photosystem II Q(b) protein (D1) - red alga (Cyanidium caldarium) chloroplast gb|AAB82694.1| (AF022186) unknown; Photosystem II Q(b) protein (D1) [Cyanidium caldarium] Length = 360 Score = 655 bits (1672), Expect = 0.0 Identities = 313/359 (87%), Positives = 333/359 (92%), Gaps = 7/359 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT LERRES +LW RFC+WITSTENRLYIGWFGVLMIP LLTAT+VFIIAFIAAPPVDI Sbjct: 1 MTVTLERRESTSLWERFCSWITSTENRLYIGWFGVLMIPCLLTATTVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNII+GA++PTS AIGLH YPIWEAAS+DEWLYNGGPY+L+VLHFL Sbjct: 61 DGIREPVSGSLLYGNNIITGAVVPTSNAIGLHLYPIWEAASLDEWLYNGGPYQLVVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVA YMGREWELS+RLGMRPWI VA+SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVAAYMGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFHM GVAGVFGG+LFSAMHGSLVTSSLIRETTENES N GY+ G Sbjct: 181 NFMLVFQAEHNILMHPFHMAGVAGVFGGALFSAMHGSLVTSSLIRETTENESPNYGYKLG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL WPVVGIW T++GISTMAFNLNG Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVVGIWLTSIGISTMAFNLNGL 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSIN 352 NFNQS+VDSQGRVINTWADIINRANLG+EVMHERNAHNFPLDLA A +PSIN Sbjct: 301 NFNQSIVDSQGRVINTWADIINRANLGIEVMHERNAHNFPLDLADNSLLPVASSSPSIN 359 >sp|P48265|PSBA_BUMFI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) emb|CAA55807.1| (X79223) D1 subunit of photosystem II [Bumilleriopsis filiformis] Length = 360 Score = 655 bits (1672), Expect = 0.0 Identities = 312/347 (89%), Positives = 333/347 (95%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERRES +LW RFC+WITSTENRLYIGWFGVLMIPTLLTAT+ +IIAFIAAPPVDI Sbjct: 1 MTATLERRESISLWERFCSWITSTENRLYIGWFGVLMIPTLLTATTCYIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGA+IP+S AIG+HFYP+WEAASVDEWLYNGGPY+LIVLHFL Sbjct: 61 DGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPVWEAASVDEWLYNGGPYQLIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGVA YMGREWELS+RLGMRPWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSLIRET+E ES N GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESTNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVV IW TALG++TMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVRIWLTALGVTTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347 NFNQSVVDSQGRVINTWADIINRA+LGMEVMHERNAHNFPLDLAA E Sbjct: 301 NFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLAAGE 347 >sp|P51765|PSB1_SYNVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S45009 photosystem II protein D1 precursor - Synechococcus sp emb|CAA55806.1| (X79222) D1 subunit of photosystem II [Synechococcus vulcanus] Length = 360 Score = 654 bits (1668), Expect = 0.0 Identities = 307/360 (85%), Positives = 332/360 (91%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L+RRES NLW RFCNW+TST+NRLY+GWFGV+MIPTLL AT F+IAFIAAPPVDI Sbjct: 1 MTTTLQRRESANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNII+GA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+LI+ HFL Sbjct: 61 DGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LG +CYMGR+WELS+RLGMRPWI VAYSAP+A+A AVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGASCYMGRQWELSYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFH LGVAGVFGG+LF AMHGSLVTSSLIRETTE ESAN GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAW VVG+WF ALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWRVVGVWFAALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353 NFN SV+D++G VINTWADIINRANLGMEVMHERNAHNFPLDLA+ E APSING Sbjct: 301 NFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLASAESAPVAMIAPSING 360 >sp|P04996|PSB1_SYNP7 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||A25362 photosystem II protein D1-I precursor - Synechococcus sp emb|CAA28291.1| (X04616) Q(B) protein (AA 1-360) [Synechococcus PCC6301] gb|AAA22055.1| (M11557) thylakoid membrane protein (psbA) [Synechococcus sp. PCC 6301] Length = 360 Score = 653 bits (1667), Expect = 0.0 Identities = 303/360 (84%), Positives = 335/360 (92%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT+IL + +N+W RFC W+TST+NR+Y+GWFGVLMIPTLLTAT FI+AFIAAPPVDI Sbjct: 1 MTSILREQRRDNVWDRFCEWVTSTDNRIYVGWFGVLMIPTLLTATICFIVAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V HFL Sbjct: 61 DGIREPVAGSLMYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LG++CYMGR+WELS+RLGMRPWI VAYSAP++AA AVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGISCYMGRQWELSYRLGMRPWICVAYSAPLSAAFAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG Sbjct: 181 NFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL AWPVVGIWFT++GISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVVGIWFTSMGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353 NFNQSV+DSQG+VINTWAD++NRANLGMEVMHERNAHNFPLDLAA E APSI+G Sbjct: 301 NFNQSVLDSQGKVINTWADVLNRANLGMEVMHERNAHNFPLDLAAGEATPVALTAPSIHG 360 >sp|P16033|PSB2_SYNY3 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2YB16 photosystem II protein D1.II precursor - Synechocystis sp. (strain PCC 6803) emb|CAA31899.1| (X13547) D1 protein (AA 1 - 360) [Synechocystis PCC6803] emb|CAA39472.1| (X56000) D1 polypeptide [Synechocystis PCC6803] dbj|BAA16586.1| (D90899) photosystem II D1 protein [Synechocystis sp.] dbj|BAA18230.1| (D90912) photosystem II D1 protein [Synechocystis sp.] Length = 360 Score = 652 bits (1663), Expect = 0.0 Identities = 301/360 (83%), Positives = 334/360 (92%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L++RES +LW +FC W+TST NR+Y+GWFG LMIPTLLTAT+ FIIAFIAAPPVDI Sbjct: 1 MTTTLQQRESASLWEQFCQWVTSTNNRIYVGWFGTLMIPTLLTATTCFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V HFL Sbjct: 61 DGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ CYMGR+WELS+RLGMRPWI VAYSAPV+AATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 IGIFCYMGRQWELSYRLGMRPWICVAYSAPVSAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEVESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL AWPV+GIWFTA+G+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQS++DSQGRVI TWAD++NRAN+G EVMHERNAHNFPLDLA A+ AP++NG Sbjct: 301 NFNQSILDSQGRVIGTWADVLNRANIGFEVMHERNAHNFPLDLASGEQAPVALTAPAVNG 360 >sp|P51764|PSB2_MICAE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) dbj|BAA12284.1| (D84228) D1 protein [Microcystis aeruginosa] Length = 360 Score = 651 bits (1662), Expect = 0.0 Identities = 303/360 (84%), Positives = 333/360 (92%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L++RES +LW +FC WITST NRLY+GWFGV+MIPTLLTAT+ FIIAFIAAPPVDI Sbjct: 1 MTTTLQQRESASLWEQFCQWITSTNNRLYVGWFGVIMIPTLLTATTCFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL Sbjct: 61 DGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 LGV CY+GR+WELSFRLGMRPWI VAYSAPV+AATAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 LGVFCYLGRQWELSFRLGMRPWICVAYSAPVSAATAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG Sbjct: 181 NFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEIESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL AWPV+GIWFTA+G+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQS++DSQGRVI TW D++NRA +GMEVMHERNAHNFPLDLA A+ AP+ING Sbjct: 301 NFNQSILDSQGRVIGTWVDVLNRAGIGMEVMHERNAHNFPLDLASGEQAPVALTAPAING 360 >gb|AAA84445.1| (K01200) psbA gene product [Amaranthus hybridus] prf||1001242A protein psbA [Amaranthus hybridus] Length = 317 Score = 648 bits (1653), Expect = 0.0 Identities = 314/317 (99%), Positives = 316/317 (99%) Query: 37 MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96 MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI Sbjct: 1 MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 60 Query: 97 WEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA 156 WEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA Sbjct: 61 WEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA 120 Query: 157 VFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHG 216 VFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHG Sbjct: 121 VFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHG 180 Query: 217 SLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA 276 SLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA Sbjct: 181 SLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA 240 Query: 277 AWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNA 336 AWPV+GIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNA Sbjct: 241 AWPVIGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNA 300 Query: 337 HNFPLDLAAVEAPSING 353 HNFPLDLAA+EAPS NG Sbjct: 301 HNFPLDLAAIEAPSTNG 317 >sp|P51759|PSBA_CYAA5 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) gb|AAD09838.1| (U39610) D1 [Cyanothece sp. ATCC 51142] Length = 356 Score = 647 bits (1651), Expect = 0.0 Identities = 297/356 (83%), Positives = 331/356 (92%), Gaps = 3/356 (0%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L++RES +LW +FC W+TST NR+Y+GWFG LMIPTLLTAT+ FIIAFIAAPPVDI Sbjct: 1 MTTTLQQRESVSLWEQFCQWVTSTNNRIYVGWFGTLMIPTLLTATTCFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNI+SGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL Sbjct: 61 DGIREPVAGSLLYGNNIVSGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ CYMGR+WELS+RLGMRPWI VAYSAPV+A TAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 IGIFCYMGRQWELSYRLGMRPWICVAYSAPVSARTAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG Sbjct: 181 NFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEIESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL AWPV+GIWFTA+G+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGAWPVIGIWFTAMGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE---APSING 353 NFNQS++DSQGRVI TWAD++NRA +GMEVMHERNAHNFPLDLA+ E AP ING Sbjct: 301 NFNQSILDSQGRVIGTWADVLNRAGIGMEVMHERNAHNFPLDLASAEPVSAPVING 356 >sp|P14660|PSBA_SYNY4 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2YB17 photosystem II protein D1 precursor - Synechocystis sp. (strain PCC 6714) emb|CAA33538.1| (X15514) psbAI product (AA 1-360) [Synechocystis PCC6714] Length = 360 Score = 647 bits (1651), Expect = 0.0 Identities = 300/360 (83%), Positives = 332/360 (91%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L++RES +LW +FC W+TST NR+Y+GWFG LMIPTLLTAT+ FIIAFIAAPPVDI Sbjct: 1 MTTTLQQRESASLWEQFCQWVTSTNNRIYVGWFGTLMIPTLLTATTCFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V FL Sbjct: 61 DGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFQFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ CYMGR+WELS+RLGMRPWI VAYSAPV+A TAVFLIYPIGQGSFSDGMPLGISGTF Sbjct: 121 IGIFCYMGRQWELSYRLGMRPWICVAYSAPVSARTAVFLIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEVESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL AWPV+GIWFTA+G+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQS++DSQGRVI TWAD++NRAN+G EVMHERNAHNFPLDLA A+ AP+ING Sbjct: 301 NFNQSILDSQGRVIGTWADVLNRANIGFEVMHERNAHNFPLDLASGEQAPVALTAPAING 360 >gb|AAD40182.1|AF156980_1 (AF156980) photosystem II D1 protein [Synechococcus sp. WH7803] Length = 359 Score = 646 bits (1648), Expect = 0.0 Identities = 294/351 (83%), Positives = 327/351 (92%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT +++R W FC W+TST NRLY+GWFGVLMIPTLL AT+ FI+AFIAAPPVDI Sbjct: 1 MTTTIQQRSGAGGWQSFCEWVTSTNNRLYVGWFGVLMIPTLLAATTCFIVAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V HFL Sbjct: 61 DGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ CYMGREWELS+RLGMRPWI VAYSAPVAAA+AVFL+YP GQGSFSDGMPLGISGTF Sbjct: 121 IGIFCYMGREWELSYRLGMRPWICVAYSAPVAAASAVFLVYPFGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFHM+GVAGVFGGSLFSAMHGSLVTSSL+RETTE+ES N GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHMMGVAGVFGGSLFSAMHGSLVTSSLVRETTESESQNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALG+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSI 351 NFNQS++D QGRV+NTWAD++NRANLGMEVMHERNAHNFPLDLAA E+ + Sbjct: 301 NFNQSILDGQGRVLNTWADVLNRANLGMEVMHERNAHNFPLDLAAAESTPV 351 >sp|P24725|PSBA_CYACA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||A48306 photosystem II protein D1 precursor - red alga (Cyanidium caldarium) chloroplast emb|CAA36969.1| (X52758) photosystem II associated D1 protein [Cyanidium caldarium] Length = 360 Score = 646 bits (1648), Expect = 0.0 Identities = 307/345 (88%), Positives = 327/345 (93%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTA LERR++ +LW RFC+WITSTENRLYIGWFGVLMIPTLLTATSVFII FIAAPPVDI Sbjct: 1 MTATLERRQTASLWERFCSWITSTENRLYIGWFGVLMIPTLLTATSVFIIGFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREP SLLYGNNII+GAI+PTS AIG+HFYPIWEAAS+DEWLYNGGPYELIVLHF Sbjct: 61 DGIREPGFRSLLYGNNIITGAIVPTSNAIGIHFYPIWEAASLDEWLYNGGPYELIVLHFF 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ YMGREWELS+RLGMRPWIAVA+SAPVAAATAVF+IYPIGQGSFSDGMPLGISGTF Sbjct: 121 IGICAYMGREWELSYRLGMRPWIAVAFSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFHM+GVAGVFGGSLFSAMHGSLVTSSLIRE TENESAN GY+FG Sbjct: 181 NFMLVFQAEHNILMHPFHMMGVAGVFGGSLFSAMHGSLVTSSLIRERTENESANNGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QE ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA WPVV I TALG+STMAFNLNGF Sbjct: 241 QEYETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLALWPVVCICVTALGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 345 NFNQSVVDSQGRVINTWADI+NRANLG+EVMHERNAHNFPLDLA+ Sbjct: 301 NFNQSVVDSQGRVINTWADILNRANLGIEVMHERNAHNFPLDLAS 345 >sp|P24726|PSBA_ECTSI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S32576 photosystem II protein D1 precursor - brown alga (Ectocarpus siliculosus) emb|CAA40023.1| (X56695) D1 [Ectocarpus siliculosus] Length = 360 Score = 645 bits (1645), Expect = 0.0 Identities = 308/360 (85%), Positives = 331/360 (91%), Gaps = 7/360 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 M A LERRE + WG F WITSTENRLYIGWFG LMIPTLLTA S +IIAFIAAPPVDI Sbjct: 1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPV+GSLLYGNNIISGA+IP+S AIG+HFYPIWEAAS++EWLYNGGPY+LIV HFL Sbjct: 61 DGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +GVAC+MGREWELS+RLGMRPWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF Sbjct: 121 IGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILM PFHM GVAGVFGGSLFSAMHGSLVTSSLIRET+E ES N GY+FG Sbjct: 181 NFMIVFQAEHNILMRPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIW TALG+STMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQSVVDS+GRVINTWADIINRA+LGMEVMHERNAHNFPLDLA A+ APS+ G Sbjct: 301 NFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360 >sp|P35877|PSB2_SYNEN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) dbj|BAA03264.1| (D14325) D1 protein [Synechococcus elongatus] Length = 360 Score = 642 bits (1639), Expect = 0.0 Identities = 303/358 (84%), Positives = 330/358 (91%), Gaps = 7/358 (1%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT +L+RR++ NLW RFC+WITSTENRLYIGWFGV+MIPTLL AT F+IAFIAAPPVDI Sbjct: 1 MTTVLQRRQTANLWERFCDWITSTENRLYIGWFGVIMIPTLLAATICFVIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNII+ A++P+S AIGLH YPIW+AAS+DEWLYNGGPY+LI+ HFL Sbjct: 61 DGIREPVSGSLLYGNNIITAAVVPSSNAIGLHLYPIWDAASLDEWLYNGGPYQLIIFHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ CYMGREWELS+RLGMRPWI VA+SAPVAAATAV LIYPIGQGSFSDG+ LGISGTF Sbjct: 121 IGIFCYMGREWELSYRLGMRPWIPVAFSAPVAAATAVLLIYPIGQGSFSDGLMLGISGTF 180 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGG+LF+AMHGSLVTSSLIRETTE ES N GY+FG Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGALFAAMHGSLVTSSLIRETTETESTNYGYKFG 240 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF ALGISTMAFNLNGF Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFAALGISTMAFNLNGF 300 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSI 351 NFN SVVD+QG VINTWADIINRAN+G+EVMHERNAHNFPLDLA+ E APSI Sbjct: 301 NFNHSVVDAQGNVINTWADIINRANIGIEVMHERNAHNFPLDLASGELAPVAMIAPSI 358 >gi|11466988 PSII D1-polypeptide [Euglena gracilis] sp|P06631|PSBA_EUGGR PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S34503 photosystem II protein D1 - Euglena gracilis chloroplast emb|CAA25319.1| (X00735) 32 kd protein [Euglena gracilis] emb|CAA50082.1| (X70810) PSII D1-polypeptide [Euglena gracilis] Length = 345 Score = 641 bits (1635), Expect = 0.0 Identities = 297/344 (86%), Positives = 323/344 (93%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 ++ +L++ +LW RFC W+ S +NRLY+GWFGVLMIPTLLTA +VFIIAFIAAPPVDI Sbjct: 2 ISPVLKKYARPSLWYRFCAWVASKKNRLYVGWFGVLMIPTLLTAATVFIIAFIAAPPVDI 61 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSL YGNNII+GA++PTS AIGLHFYPIWEA S+DEWLYNGGPY+LIV HF Sbjct: 62 DGIREPVSGSLFYGNNIITGAVVPTSNAIGLHFYPIWEATSLDEWLYNGGPYQLIVCHFF 121 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ YMGREWELSFRLGMRPWIAVAYSAPVAAA+AVF++YP+GQGSFSDGMPLGISGTF Sbjct: 122 IGICSYMGREWELSFRLGMRPWIAVAYSAPVAAASAVFIVYPLGQGSFSDGMPLGISGTF 181 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTENES N GY+FG Sbjct: 182 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLLRETTENESINVGYKFG 241 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNI+AAH YFGRLIFQYASFNNSRSLHFFLA WPVVGIWFTALG+STMAFNLNGF Sbjct: 242 QEEETYNIIAAHAYFGRLIFQYASFNNSRSLHFFLAVWPVVGIWFTALGVSTMAFNLNGF 301 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 344 NFNQSV+DSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA Sbjct: 302 NFNQSVIDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 345 >emb|CAA25447.1| (X00929) 32-Kda thylakoid membrane protein [Euglena gracilis] prf||1010249A protein,thylakoid membrane [Euglena gracilis] Length = 345 Score = 640 bits (1633), Expect = 0.0 Identities = 296/344 (86%), Positives = 323/344 (93%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 ++ +L++ +LW RFC W+ S +NRLY+GWFGVLMIPTLLTA +VFIIAFIAAPPVDI Sbjct: 2 ISPVLKKYARPSLWYRFCAWVASKKNRLYVGWFGVLMIPTLLTAATVFIIAFIAAPPVDI 61 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSL YGNNI++GA++PTS AIGLHFYPIWEA S+DEWLYNGGPY+LIV HF Sbjct: 62 DGIREPVSGSLFYGNNILTGAVVPTSNAIGLHFYPIWEATSLDEWLYNGGPYQLIVCHFF 121 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ YMGREWELSFRLGMRPWIAVAYSAPVAAA+AVF++YP+GQGSFSDGMPLGISGTF Sbjct: 122 IGICSYMGREWELSFRLGMRPWIAVAYSAPVAAASAVFIVYPLGQGSFSDGMPLGISGTF 181 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTENES N GY+FG Sbjct: 182 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLLRETTENESINVGYKFG 241 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QEEETYNI+AAH YFGRLIFQYASFNNSRSLHFFLA WPVVGIWFTALG+STMAFNLNGF Sbjct: 242 QEEETYNIIAAHAYFGRLIFQYASFNNSRSLHFFLAVWPVVGIWFTALGVSTMAFNLNGF 301 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 344 NFNQSV+DSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA Sbjct: 302 NFNQSVIDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 345 >gb|AAD51002.1|AF170924_1 (AF170924) photosystem II D1 protein [Mastigocladus laminosus] Length = 358 Score = 636 bits (1623), Expect = 0.0 Identities = 299/360 (83%), Positives = 331/360 (91%), Gaps = 9/360 (2%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L R E+ +LW RFC+WITST NR+Y+GWFGVLMIPTLL AT F+IAFIAAPPVDI Sbjct: 1 MTTTLRRGETGSLWDRFCDWITSTNNRIYVGWFGVLMIPTLLAATICFVIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNII+GA++PTS AIGLHFYPIWEA +DEWLYNGGPYELIV HFL Sbjct: 61 DGIREPVSGSLLYGNNIITGAVVPTSNAIGLHFYPIWEA--LDEWLYNGGPYELIVFHFL 118 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180 +G+ C++GR+WELS+RLGMRPWI VAYSAPVAAAT+VFLIYPIGQGSFSDGMPLGI+GTF Sbjct: 119 IGIFCWLGRQWELSYRLGMRPWICVAYSAPVAAATSVFLIYPIGQGSFSDGMPLGITGTF 178 Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFH LGVAGVFGGSLF AMHGSLVTSSL+RETTE ES N GY+FG Sbjct: 179 NFMLVFQAEHNILMHPFHQLGVAGVFGGSLFCAMHGSLVTSSLVRETTETESQNYGYKFG 238 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QE+ETY+IVAAHGYFGRLI+QYASFNNSRSLHFFLAAWPVV IWFTALGISTMAFNLNGF Sbjct: 239 QEQETYSIVAAHGYFGRLIWQYASFNNSRSLHFFLAAWPVVCIWFTALGISTMAFNLNGF 298 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 NFNQS++DSQGRV+NTWADI+NRANLGMEVMHERNAHNFPLDLA A+++P+ING Sbjct: 299 NFNQSILDSQGRVVNTWADILNRANLGMEVMHERNAHNFPLDLAAGEVLPIALQSPAING 358 >sp|P07826|PSB1_SYNY3 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||F2YB13 photosystem II protein D1 precursor - Synechocystis sp. (strain PCC 6803) dbj|BAA18829.1| (D90917) photosystem II D1 protein [Synechocystis sp.] Length = 360 Score = 612 bits (1561), Expect = e-174 Identities = 282/352 (80%), Positives = 317/352 (89%), Gaps = 7/352 (1%) Query: 9 ESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVS 68 + ++LW RFC WITST NRLYIGWFGVLMIPTLLTAT+ FIIAFIAAPPVDIDGIREP++ Sbjct: 9 QEQSLWSRFCCWITSTSNRLYIGWFGVLMIPTLLTATTCFIIAFIAAPPVDIDGIREPIA 68 Query: 69 GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMG 128 GSLLYGNNII+ A++P+S AIGLHFYPIWEA S+DEWLYNGGPY+LIV HFL+G+ CY+G Sbjct: 69 GSLLYGNNIITAAVVPSSNAIGLHFYPIWEAHSLDEWLYNGGPYQLIVFHFLIGIFCYLG 128 Query: 129 REWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQA 188 R+WELS+RLGMRPWI VAYSAPVAAATA LIY IGQGSFSDG+PLGISGTFNFM+V QA Sbjct: 129 RQWELSYRLGMRPWICVAYSAPVAAATATLLIYSIGQGSFSDGLPLGISGTFNFMLVLQA 188 Query: 189 EHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNI 248 EHN+LMHPFHMLGVAGVFGG+LF+AMHGSLVTSSLIRETTE ES N+GY+FGQEEETYNI Sbjct: 189 EHNVLMHPFHMLGVAGVFGGALFAAMHGSLVTSSLIRETTEVESQNQGYKFGQEEETYNI 248 Query: 249 VAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVD 308 VAAHGYFGRLIFQYASFNNSR+LHFFL AWPVVGIWF AL + AFNLNGFNFNQS++D Sbjct: 249 VAAHGYFGRLIFQYASFNNSRALHFFLGAWPVVGIWFAALAVCCFAFNLNGFNFNQSILD 308 Query: 309 SQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 +QGR ++TWAD+INRAN+G EVMHERN HNFPLDLA A+ AP+I G Sbjct: 309 AQGRPVSTWADVINRANIGFEVMHERNVHNFPLDLASGDAQMVALNAPAIEG 360 >gb|AAD34735.1| (AF131887) photosystem Q (B) protein precursor [Poa annua] Length = 296 Score = 610 bits (1556), Expect = e-174 Identities = 295/296 (99%), Positives = 296/296 (99%) Query: 46 SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW 105 SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW Sbjct: 1 SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW 60 Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ Sbjct: 61 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 120 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIR 225 GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIR Sbjct: 121 GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIR 180 Query: 226 ETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 285 ETTENESANEGY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF Sbjct: 181 ETTENESANEGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 240 Query: 286 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL 341 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL Sbjct: 241 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL 296 >gb|AAD34734.1| (AF131886) mutant photosystem Q (B) protein precursor [Poa annua] Length = 296 Score = 610 bits (1555), Expect = e-173 Identities = 294/296 (99%), Positives = 296/296 (99%) Query: 46 SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW 105 SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW Sbjct: 1 SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW 60 Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ Sbjct: 61 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 120 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIR 225 GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSL+TSSLIR Sbjct: 121 GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLITSSLIR 180 Query: 226 ETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 285 ETTENESANEGY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF Sbjct: 181 ETTENESANEGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 240 Query: 286 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL 341 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL Sbjct: 241 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL 296 >emb|CAA68778.1| (Y00885) D1 protein (AA 1-360) [Synechocystis PCC6803] Length = 360 Score = 604 bits (1540), Expect = e-172 Identities = 279/352 (79%), Positives = 314/352 (88%), Gaps = 7/352 (1%) Query: 9 ESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVS 68 + ++LW RFC WITST NRLYIGWFGVLMIPTLLTAT+ FIIAFIAAPPVDIDGIREP++ Sbjct: 9 QEQSLWSRFCCWITSTSNRLYIGWFGVLMIPTLLTATTCFIIAFIAAPPVDIDGIREPIA 68 Query: 69 GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMG 128 GSLLYGNNII+ A++P+S AI LHFYPIWEA S+DEWLYNGGPY+L V HFL+G+ CY+G Sbjct: 69 GSLLYGNNIITAAVVPSSNAIALHFYPIWEAHSLDEWLYNGGPYQLNVFHFLIGIFCYLG 128 Query: 129 REWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQA 188 R+WELS+RLGMRPWI VAYSAPVAAATA LIY IGQGSFSDG+PLGISGTFNFM+V QA Sbjct: 129 RQWELSYRLGMRPWICVAYSAPVAAATATLLIYSIGQGSFSDGLPLGISGTFNFMLVLQA 188 Query: 189 EHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNI 248 EHN+LMHPFHMLGVAGVFGG+LF+AMHGSLVTSSLIRETTE ES N+GY+FGQEEETYNI Sbjct: 189 EHNVLMHPFHMLGVAGVFGGALFAAMHGSLVTSSLIRETTEVESQNQGYKFGQEEETYNI 248 Query: 249 VAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVD 308 VAAHGYFGRLIFQYASFNNSR+LH FL AWPVVGIWF AL + AFNLNGFNFNQS++D Sbjct: 249 VAAHGYFGRLIFQYASFNNSRALHSFLGAWPVVGIWFAALAVCCFAFNLNGFNFNQSILD 308 Query: 309 SQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353 +QGR ++TWAD+INRAN+G EVMHERN HNFPLDLA A+ AP+I G Sbjct: 309 AQGRPVSTWADVINRANIGFEVMHERNVHNFPLDLASGDAQMVALNAPAIEG 360 >gb|AAB61275.1| (U96631) D1 protein, photosystem II [Acorus gramineus] Length = 309 Score = 601 bits (1534), Expect = e-171 Identities = 291/309 (94%), Positives = 291/309 (94%) Query: 32 WFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGL 91 WFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGL Sbjct: 1 WFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGL 60 Query: 92 HFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPV 151 HFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA Sbjct: 61 HFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAXXXXXXX 120 Query: 152 AAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLF 211 FLIYPIGQGSFSDGMPLGISGT NFMIVFQAEHNI MHPFHMLGVAGVFGGSLF Sbjct: 121 XXXXXXFLIYPIGQGSFSDGMPLGISGTXNFMIVFQAEHNIXMHPFHMLGVAGVFGGSLF 180 Query: 212 SAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL 271 SAMHGSLVTSSLIRETTEN SANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL Sbjct: 181 SAMHGSLVTSSLIRETTENXSANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL 240 Query: 272 HFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVM 331 HFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVI TWAD INRANLGMEVM Sbjct: 241 HFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVIXTWADXINRANLGMEVM 300 Query: 332 HERNAHNFP 340 HERNAHNFP Sbjct: 301 HERNAHNFP 309 >sp|P46895|PSBA_PROMA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S54256 photosystem II protein D1 - Prochlorococcus marinus emb|CAA89062.1| (Z49201) D1 protein of photosystem II [Prochlorococcus marinus] Length = 360 Score = 600 bits (1530), Expect = e-171 Identities = 277/352 (78%), Positives = 315/352 (88%), Gaps = 1/352 (0%) Query: 1 MTAILERRESE-NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVD 59 MT I ++R S W +FC W+TST+NR+Y+GWFGVLMIP LL A F++AFIAAPPVD Sbjct: 1 MTTIRQQRSSLLKGWPQFCEWVTSTDNRIYVGWFGVLMIPCLLAAAICFVVAFIAAPPVD 60 Query: 60 IDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHF 119 IDGIREPV+GS LYGNNIISGA++P+S AIGLHFYPIWEAA++DEWL NGGPY+L++ HF Sbjct: 61 IDGIREPVAGSFLYGNNIISGAVVPSSNAIGLHFYPIWEAATLDEWLNNGGPYQLVIFHF 120 Query: 120 LLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGT 179 L+G+ +MGR+WELS+RLGMRPWI VAYSAPV+AA AVFL+YP GQGSFSDGMPLGISGT Sbjct: 121 LIGICGWMGRQWELSYRLGMRPWICVAYSAPVSAAFAVFLVYPFGQGSFSDGMPLGISGT 180 Query: 180 FNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRF 239 FNFM VFQAEHNILMHPFHM GVAG+FGGSLFSAMHGSLVTSSLIRETTE ES N GY+F Sbjct: 181 FNFMFVFQAEHNILMHPFHMAGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKF 240 Query: 240 GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNG 299 GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA +PVV +W T++GI TMAFNLNG Sbjct: 241 GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAIFPVVCVWLTSMGICTMAFNLNG 300 Query: 300 FNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSI 351 FNFNQSVVD+ G+V+ TW D++NRANLGMEVMHERNAHNFPLDLAA E+ S+ Sbjct: 301 FNFNQSVVDANGKVVPTWGDVLNRANLGMEVMHERNAHNFPLDLAAAESTSV 352 >dbj|BAA86296.1| (AB027234) photosystem II core 32 kDa protein [Gymnodinium mikimotoi] Length = 360 Score = 590 bits (1504), Expect = e-167 Identities = 270/331 (81%), Positives = 302/331 (90%) Query: 14 WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 73 W FC+W+T+TENRLY+GWFG LM+PTL++AT +II F+AAPPVDIDGIREPVSGSLLY Sbjct: 17 WEFFCSWVTTTENRLYLGWFGCLMVPTLVSATFAYIIGFLAAPPVDIDGIREPVSGSLLY 76 Query: 74 GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 133 NNIISGA+IP+S A+G+HFYPIWEAAS+DEWLYNGG Y+L+V HF +GV Y+GREWEL Sbjct: 77 ANNIISGAVIPSSNAMGVHFYPIWEAASLDEWLYNGGTYQLVVFHFFIGVCSYLGREWEL 136 Query: 134 SFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 193 S+RLGMRPWI VA+SAPVAAA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNIL Sbjct: 137 SYRLGMRPWIFVAFSAPVAAASAVFIVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNIL 196 Query: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHG 253 MHP HM GVA VFGGSLFSAMHGSLVTSSL++ET E ESAN GYRFGQ ETYNIVAAHG Sbjct: 197 MHPLHMFGVAAVFGGSLFSAMHGSLVTSSLLKETAEFESANYGYRFGQSTETYNIVAAHG 256 Query: 254 YFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRV 313 YFGRLIFQYASFNNSRSLHFFL AWPVVGIW TA+G+STMAFNLNG NF QS++D+ G Sbjct: 257 YFGRLIFQYASFNNSRSLHFFLGAWPVVGIWLTAMGVSTMAFNLNGLNFQQSILDASGCP 316 Query: 314 INTWADIINRANLGMEVMHERNAHNFPLDLA 344 INTWADI+NRANLGMEVMHERNAHNFPLDLA Sbjct: 317 INTWADILNRANLGMEVMHERNAHNFPLDLA 347 >gb|AAD44700.1| (AF130033) PSII D1 reaction center protein [Heterocapsa triquetra] dbj|BAA83814.2| (AB025587) psbA [Heterocapsa triquetra] Length = 348 Score = 571 bits (1455), Expect = e-162 Identities = 261/333 (78%), Positives = 295/333 (88%) Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71 + WG F +I ST NRLYIGWFG+LM P L+ AT +I AFI APPVDIDGIREPV+G+L Sbjct: 16 SFWGSFIGFILSTSNRLYIGWFGILMFPLLVLATVAYIAAFIFAPPVDIDGIREPVAGAL 75 Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131 LYGNNIISGA+IP+S AIG+HFYP+WEA DEWLYNGG Y+ +VLHF+ G YMGREW Sbjct: 76 LYGNNIISGAVIPSSNAIGVHFYPVWEALGFDEWLYNGGTYQFVVLHFIFGAGAYMGREW 135 Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191 E SFRLGMRPWI VA+SAP+ AA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHN Sbjct: 136 EFSFRLGMRPWIFVAFSAPLVAASAVFIVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHN 195 Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251 ILMHPFH+LGVA VFGGSLFSAMHGSLVTSSL+ ET + S N GY FGQE+ETY+I AA Sbjct: 196 ILMHPFHILGVAAVFGGSLFSAMHGSLVTSSLLAETAGDLSLNIGYNFGQEDETYSISAA 255 Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311 HGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFT+LG+STMAFNLNG NFNQS++DS G Sbjct: 256 HGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTSLGVSTMAFNLNGLNFNQSIIDSSG 315 Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344 +IN+WADI+NRA+LGMEVMHERNAHNFPLDLA Sbjct: 316 HLINSWADIVNRADLGMEVMHERNAHNFPLDLA 348 >gb|AAF89983.1|AF206709_1 (AF206709) PSII D1 reaction center protein [Heterocapsa niei] Length = 347 Score = 570 bits (1453), Expect = e-161 Identities = 262/333 (78%), Positives = 295/333 (87%) Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71 + WG +I ST NRLYIGWFG+LM P L+ AT FI AFI APPVDIDGIREPV+G+L Sbjct: 15 SFWGYVIGFILSTSNRLYIGWFGILMFPLLVLATVAFISAFIFAPPVDIDGIREPVAGAL 74 Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131 LYGNNIISGA+IP+S AIG+HFYP+WEA DEWLYNGG Y+ +VLHF+LG YMGREW Sbjct: 75 LYGNNIISGAVIPSSNAIGVHFYPVWEALGFDEWLYNGGTYQFVVLHFILGAGAYMGREW 134 Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191 E +FRLGMRPWI VA+SAP+ AA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHN Sbjct: 135 EFAFRLGMRPWIFVAFSAPLVAASAVFVVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHN 194 Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251 ILMHPFH+LGVA VFGGSLFSAMHGSLVTSSL+ ET + S N GY FGQE+ETY+I AA Sbjct: 195 ILMHPFHILGVAAVFGGSLFSAMHGSLVTSSLLAETAGDLSLNVGYNFGQEDETYSISAA 254 Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311 HGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG NFNQS++DS G Sbjct: 255 HGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDSSG 314 Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344 +IN+WADI+NRA+LGMEVMHERNAHNFPLDLA Sbjct: 315 HLINSWADIVNRADLGMEVMHERNAHNFPLDLA 347 >gb|AAF89981.1|AF206707_1 (AF206707) PSII D1 reaction center protein [Heterocapsa pygmaea] Length = 348 Score = 570 bits (1453), Expect = e-161 Identities = 261/333 (78%), Positives = 295/333 (88%) Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71 + WG +I ST NRLYIGWFG+LM P L+ AT +I AFI APPVDIDGIREPV+G+L Sbjct: 16 SFWGYVIGFILSTSNRLYIGWFGILMFPLLVLATVAYIAAFIFAPPVDIDGIREPVAGAL 75 Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131 LYGNNIISGA+IP+S AIG+HFYP+WEA DEWLYNGG Y+ +VLHF+LG YMGREW Sbjct: 76 LYGNNIISGAVIPSSNAIGVHFYPVWEALGFDEWLYNGGTYQFVVLHFILGAGAYMGREW 135 Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191 E +FRLGMRPWI VA+SAP+ AA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHN Sbjct: 136 EFAFRLGMRPWIFVAFSAPLVAASAVFIVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHN 195 Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251 ILMHPFH+LGVA VFGGSLFSAMHGSLVTSSL+ ET + S N GY FGQE+ETY+I AA Sbjct: 196 ILMHPFHILGVAAVFGGSLFSAMHGSLVTSSLVAETAGDLSLNVGYNFGQEDETYSISAA 255 Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311 HGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG NFNQS++DS G Sbjct: 256 HGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDSSG 315 Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344 +IN+WADI+NRA+LGMEVMHERNAHNFPLDLA Sbjct: 316 HLINSWADIVNRADLGMEVMHERNAHNFPLDLA 348 >gb|AAB61274.1| (U96630) D1 protein, photosystem II [Phoenix dactylifera] Length = 303 Score = 566 bits (1444), Expect = e-160 Identities = 278/303 (91%), Positives = 280/303 (91%) Query: 34 GVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHF 93 GVLMIPTLL ATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHF Sbjct: 1 GVLMIPTLLXATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHF 60 Query: 94 YPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAA 153 YPIWEAA VDEWLYNGGPYELIVLHFLLGVACYMGREWELSFR PWIAVAYSAPV A Sbjct: 61 YPIWEAAXVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRXXXSPWIAVAYSAPVGA 120 Query: 154 ATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSA 213 AT+VFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGG Sbjct: 121 ATSVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGXXXXX 180 Query: 214 MHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHF 273 LVTSSLIRETTENESAN GYRFGQE ETYNIVAAHGYFGRLIFQYASF+NSRSLHF Sbjct: 181 XXXXLVTSSLIRETTENESANAGYRFGQEGETYNIVAAHGYFGRLIFQYASFHNSRSLHF 240 Query: 274 FLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHE 333 FLAAWPVVGIWFTALGISTMAFNLNGF FNQSVVDSQGR INTWADIINR NLGMEVM Sbjct: 241 FLAAWPVVGIWFTALGISTMAFNLNGFXFNQSVVDSQGRDINTWADIINRXNLGMEVMXX 300 Query: 334 RNA 336 RNA Sbjct: 301 RNA 303 >gb|AAF89980.1|AF206706_2 (AF206706) PSII D1 reaction center protein [Heterocapsa rotundata] Length = 348 Score = 563 bits (1436), Expect = e-159 Identities = 257/333 (77%), Positives = 293/333 (87%) Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71 + WG ++ ST NRLYIGWFG+LM P + AT +I AFI APPVDIDGIREPV+G+L Sbjct: 16 SFWGYVIGFLLSTSNRLYIGWFGILMFPLISLATVAYIAAFIFAPPVDIDGIREPVAGAL 75 Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131 LYGNNIISGA+IP+S AIG+HFYP+WEA DEWLYNGG Y+ +VLHF+ G +MGREW Sbjct: 76 LYGNNIISGAVIPSSNAIGVHFYPVWEALGFDEWLYNGGTYQFVVLHFIFGAGAWMGREW 135 Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191 E +FRLGMRPWI VA+SAP+ A+ AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHN Sbjct: 136 EFAFRLGMRPWIFVAFSAPLVASCAVFVVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHN 195 Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251 ILMHPFH+LGVAGVFGGSLFSAMHGSLVTSSL+ ET + S N GY FGQE+ETY+I AA Sbjct: 196 ILMHPFHILGVAGVFGGSLFSAMHGSLVTSSLLAETAGDLSLNVGYNFGQEDETYSISAA 255 Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311 HGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG NFNQS++DS G Sbjct: 256 HGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDSSG 315 Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344 +IN+WADI+NRA+LGMEVMHERNAHNFPLDLA Sbjct: 316 HLINSWADIVNRADLGMEVMHERNAHNFPLDLA 348 >dbj|BAA83815.1| (AB025588) psbA [Gonyaulax polyedra] Length = 345 Score = 563 bits (1435), Expect = e-159 Identities = 256/335 (76%), Positives = 297/335 (88%) Query: 10 SENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSG 69 S + WG ++ ST NR YIGWFG+LM P + A +I AFI APPVDIDGIREPV+G Sbjct: 11 SYSWWGYLVGFVLSTSNRFYIGWFGILMFPLIGLAIVAYISAFIFAPPVDIDGIREPVAG 70 Query: 70 SLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGR 129 SLLYGNNII+GA++P+S AIG+HFYP+WE+ DEWLYNGG Y+ +VLHF++GV+C+MGR Sbjct: 71 SLLYGNNIITGAVVPSSNAIGVHFYPVWESLGFDEWLYNGGTYQFVVLHFIVGVSCWMGR 130 Query: 130 EWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAE 189 EWE SFRLGMRPWI VA+SAP+ AA+AVF+ YPIGQGSFSDGMPLGISGTFNFM+VFQAE Sbjct: 131 EWEFSFRLGMRPWIFVAFSAPLVAASAVFVFYPIGQGSFSDGMPLGISGTFNFMLVFQAE 190 Query: 190 HNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIV 249 HNILMHPFH+LGVAGVFGGSLFSAMHGSLV+SSL+ ET+ + S N GY FGQE+ETY+I Sbjct: 191 HNILMHPFHILGVAGVFGGSLFSAMHGSLVSSSLLAETSGDVSLNVGYNFGQEDETYSIS 250 Query: 250 AAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDS 309 AAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG NFNQS++DS Sbjct: 251 AAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDS 310 Query: 310 QGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 344 G +IN+WADI+NRA+LG+EVMHERNAHNFPLDLA Sbjct: 311 SGHLINSWADIVNRADLGIEVMHERNAHNFPLDLA 345 >dbj|BAA83813.1| (AB025586) psbA [Amphidinium carterae] Length = 340 Score = 557 bits (1419), Expect = e-157 Identities = 254/333 (76%), Positives = 291/333 (87%) Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71 N WG F ITS+ NRLYIGWFG+L+ P L AT +I AF AP VDIDGIREPV+GSL Sbjct: 8 NSWGSFVQTITSSSNRLYIGWFGLLVFPLLSLATVAYITAFFLAPAVDIDGIREPVAGSL 67 Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131 +YGNNIISGA++P+S AIG+HFYP+WE+ +DEWLYNGG Y+ +VLHF +GV +MGREW Sbjct: 68 IYGNNIISGAVVPSSNAIGVHFYPLWESLGLDEWLYNGGTYQFVVLHFFIGVCGWMGREW 127 Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191 E S+RLGMRPWI VA+SAP+AAA AVF++YPIGQGSFSDGMPLGI GTFNFM+VFQAEH Sbjct: 128 EFSYRLGMRPWIFVAFSAPIAAAAAVFIVYPIGQGSFSDGMPLGIQGTFNFMLVFQAEHK 187 Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251 ILMHPFH+LGVAGVFGGSLFSAMHGSLV+SSL+ ET +ES N GY FGQE+ETY+I AA Sbjct: 188 ILMHPFHILGVAGVFGGSLFSAMHGSLVSSSLLAETAGSESLNNGYVFGQEDETYSISAA 247 Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311 H YFGRLIFQY SFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNGFNFNQS++D G Sbjct: 248 HAYFGRLIFQYGSFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGFNFNQSILDESG 307 Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344 IN+WADI+NRA+LG+EVMHERNAHNFPLDLA Sbjct: 308 HYINSWADILNRADLGIEVMHERNAHNFPLDLA 340 >gb|AAF31417.1|AF206672_1 (AF206672) photosystem II protein D1 [Amphidinium carterae] emb|CAB75842.1| (AJ250262) photosystem II D1 protein [Amphidinium operculatum] gb|AAF89982.1|AF206708_1 (AF206708) PSII D1 reaction center protein [Amphidinium carterae] Length = 340 Score = 556 bits (1417), Expect = e-157 Identities = 255/333 (76%), Positives = 291/333 (86%) Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71 N WG F ITS+ NRLYIGWFG+L+ P L AT +I AF AP VDIDGIREPV+GSL Sbjct: 8 NSWGSFVQTITSSSNRLYIGWFGLLVFPLLSLATVAYITAFFLAPAVDIDGIREPVAGSL 67 Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131 +YGNNIISGA+IP+S AIG+HFYP+WE+ +DEWLYNGG Y+ +V HF LGV +MGREW Sbjct: 68 IYGNNIISGAVIPSSNAIGVHFYPLWESLGLDEWLYNGGTYQFVVFHFFLGVCGWMGREW 127 Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191 E S+RLGMRPWI VA+SAP+AAA AVF+IYPIGQGSFSDGMPLGI GTFNFM+VFQAEH Sbjct: 128 EFSYRLGMRPWIFVAFSAPIAAAAAVFIIYPIGQGSFSDGMPLGIQGTFNFMLVFQAEHK 187 Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251 ILMHPFH+LGVAGVFGGSLFSAMHGSLV+SSL+ ET +ES N GY FGQE+ETY+I AA Sbjct: 188 ILMHPFHILGVAGVFGGSLFSAMHGSLVSSSLLAETAGSESLNNGYVFGQEDETYSISAA 247 Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311 H YFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFT+LG++TMAFNLNGFNFNQS++D G Sbjct: 248 HAYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTSLGVATMAFNLNGFNFNQSILDESG 307 Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344 IN+WADI+NRA+LG+EVMHERNAHNFPLDLA Sbjct: 308 HYINSWADILNRADLGIEVMHERNAHNFPLDLA 340 >dbj|BAA83816.2| (AB025589) psbA [Alexandrium tamarense] Length = 347 Score = 551 bits (1405), Expect = e-156 Identities = 252/332 (75%), Positives = 291/332 (86%) Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71 N WG +I ST NR YIGWFG+ M P A ++ AFI APPVDIDGIREPV+GSL Sbjct: 14 NWWGTVIGFILSTSNRFYIGWFGIFMFPLTGLAIIAYVAAFILAPPVDIDGIREPVAGSL 73 Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131 LYGNNIISGA+IP+S AIG+HFYP WE+A++ EWLYNGG Y+ +VLHF+ GV+ +MGREW Sbjct: 74 LYGNNIISGAVIPSSNAIGVHFYPEWESATLLEWLYNGGTYQFVVLHFIGGVSSWMGREW 133 Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191 E SFRLGMRPWI +A+SAP+ AATAVF+ YPIGQGSFSDGMPLG+SGTFNFM+VFQAEHN Sbjct: 134 EFSFRLGMRPWIYLAFSAPLVAATAVFVFYPIGQGSFSDGMPLGVSGTFNFMLVFQAEHN 193 Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251 ILMHPFH+LGVAGVFGGSLFSAMHGSLVTSSL+ ET+ + S N GY FGQE+ETY+I AA Sbjct: 194 ILMHPFHILGVAGVFGGSLFSAMHGSLVTSSLLAETSGDVSLNVGYNFGQEDETYSISAA 253 Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311 HGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG NFNQS++DS G Sbjct: 254 HGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDSNG 313 Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDL 343 +IN+WAD++NRANLG+EVMHERN H++PLDL Sbjct: 314 HLINSWADLVNRANLGIEVMHERNTHHYPLDL 345 >dbj|BAA83812.1| (AB025585) psbA [Prorocentrum micans] Length = 343 Score = 540 bits (1376), Expect = e-152 Identities = 247/331 (74%), Positives = 287/331 (86%) Query: 14 WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 73 W +I ST +RLYIGWFGVL+ P + +T ++ AFI APPVDIDGIREPVSGSLLY Sbjct: 13 WSVVVAYIVSTNSRLYIGWFGVLLFPLIAVSTVAYVAAFILAPPVDIDGIREPVSGSLLY 72 Query: 74 GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 133 NNII+GA+IP+S AIG+HFYP+WEA S +EWLYNGG Y+ +VLHFL V ++GRE+E Sbjct: 73 SNNIITGAVIPSSNAIGVHFYPVWEAISNNEWLYNGGTYQFVVLHFLAAVLAWLGREYEY 132 Query: 134 SFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 193 SFRLGMRPWI +A+SAPV AA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNIL Sbjct: 133 SFRLGMRPWIYLAFSAPVVAASAVFVVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNIL 192 Query: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHG 253 MHPFH+LGV+ VFGGSLFSAMHGSLVTSSL+ ET +S N GY FGQE+ETY I AAHG Sbjct: 193 MHPFHILGVSAVFGGSLFSAMHGSLVTSSLLSETASYDSLNAGYVFGQEDETYAISAAHG 252 Query: 254 YFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRV 313 YFGRL+FQY SFNNSRSLHFFLAAWPV+GIW TA+G+STMAFNLNG NFNQS++DS G V Sbjct: 253 YFGRLLFQYGSFNNSRSLHFFLAAWPVIGIWCTAIGVSTMAFNLNGLNFNQSLLDSSGHV 312 Query: 314 INTWADIINRANLGMEVMHERNAHNFPLDLA 344 +N+WAD++NRA+LGMEVMHERN HNFPLDLA Sbjct: 313 VNSWADVVNRADLGMEVMHERNTHNFPLDLA 343 >gb|AAB61276.1| (U96632) D1 protein, photosystem II [Ludisia discolor] Length = 275 Score = 527 bits (1344), Expect = e-149 Identities = 256/274 (93%), Positives = 258/274 (93%) Query: 41 LLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA 100 L TSVFII FI PPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA Sbjct: 2 LXXXTSVFIIXFIXXPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA 61 Query: 101 SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLI 160 SVDEWLYNGGPYELIVLHFLLGVACYMG EWELSFRLGMRPWIAVAYSAPVAAA AVFLI Sbjct: 62 SVDEWLYNGGPYELIVLHFLLGVACYMGCEWELSFRLGMRPWIAVAYSAPVAAAAAVFLI 121 Query: 161 YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVT 220 YP+GQGSFSDGMPLGI GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVT Sbjct: 122 YPVGQGSFSDGMPLGIXGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVT 181 Query: 221 SSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV 280 SSLIRETTENESANEGYRFGQE ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV Sbjct: 182 SSLIRETTENESANEGYRFGQEGETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV 241 Query: 281 VGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVI 314 VGIWFTALGIST+ FNL GFNFN SVVD G VI Sbjct: 242 VGIWFTALGISTIXFNLXGFNFNXSVVDXXGXVI 275 >dbj|BAA83817.2| (AB025590) psbA [Alexandrium catenella] Length = 335 Score = 520 bits (1326), Expect = e-147 Identities = 241/322 (74%), Positives = 278/322 (85%) Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71 N WG +I ST NRLY+GWFG M P A ++ AFI APPVDIDGIREPV+GSL Sbjct: 14 NWWGTIIGFILSTGNRLYVGWFGTFMFPLSGLAIIGYMTAFILAPPVDIDGIREPVAGSL 73 Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131 LYGNNIISG +IP+S AIG+HFYP WE+A++ EWLYNGG Y+ IVLHF+ GV+ +MGREW Sbjct: 74 LYGNNIISGGVIPSSNAIGVHFYPEWESATLLEWLYNGGTYQFIVLHFIGGVSSWMGREW 133 Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191 E SFRLGMRPWI +A+SAP+ AATAVF++YPIGQGSFSDGMPLG+SGTFNFM+VFQAE N Sbjct: 134 EFSFRLGMRPWIYLAFSAPLIAATAVFILYPIGQGSFSDGMPLGMSGTFNFMLVFQAEQN 193 Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251 ILMHPFH+LGVAGVFGGSLFSAMHGSLVTSSL+ E+ + S N GY FGQE+ETY+I AA Sbjct: 194 ILMHPFHILGVAGVFGGSLFSAMHGSLVTSSLLAESPGDVSLNIGYNFGQEDETYSISAA 253 Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311 HGYFGRLIFQYASFNNSRSLHFFL WPV+GIWFTALG+STMAFNLNG NFNQS++DS G Sbjct: 254 HGYFGRLIFQYASFNNSRSLHFFLGGWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDSNG 313 Query: 312 RVINTWADIINRANLGMEVMHE 333 +IN+WAD++NRANLG+EVMHE Sbjct: 314 HLINSWADLMNRANLGIEVMHE 335 >gb|AAF89986.1|AF206712_1 (AF206712) PSII D1 reaction center protein [Thoracosphaera heimii] Length = 271 Score = 468 bits (1191), Expect = e-131 Identities = 215/271 (79%), Positives = 248/271 (91%) Query: 66 PVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125 PVSGSLLYGNNIISG++IP+S AIG+HFYP+WEA S DEWLYNGG Y+LIVLHF+LGV Sbjct: 1 PVSGSLLYGNNIISGSVIPSSNAIGVHFYPVWEATSADEWLYNGGSYQLIVLHFMLGVIG 60 Query: 126 YMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIV 185 ++GREWE SFRLGMRPWI VA+SAPVAAA+AVF++YPIGQGSFSDGMPLGISGTFNFM+V Sbjct: 61 WLGREWEFSFRLGMRPWIFVAFSAPVAAASAVFVVYPIGQGSFSDGMPLGISGTFNFMLV 120 Query: 186 FQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEET 245 FQAEHNILMHPF++LGV GVFGGSLFSAMHGSLV+S+L ET + + N GY FGQ ET Sbjct: 121 FQAEHNILMHPFYILGVIGVFGGSLFSAMHGSLVSSTLTCETVGDSTLNSGYLFGQTFET 180 Query: 246 YNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQS 305 Y+I +AHGYFGRLIFQYASFNNSRSLHFFL AWPV+GIWFTALG+STMAFNLNG NFNQS Sbjct: 181 YSISSAHGYFGRLIFQYASFNNSRSLHFFLGAWPVLGIWFTALGVSTMAFNLNGLNFNQS 240 Query: 306 VVDSQGRVINTWADIINRANLGMEVMHERNA 336 +VD+ G++IN+WAD++NRA+LG+EVMHERNA Sbjct: 241 IVDNNGQLINSWADLVNRADLGIEVMHERNA 271 >gb|AAF89984.1|AF206710_1 (AF206710) PSII D1 reaction center protein [Scrippsiella trochoidea] Length = 264 Score = 446 bits (1136), Expect = e-124 Identities = 203/264 (76%), Positives = 236/264 (88%) Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYM 127 +GSLLYGNNIISG+++P+S AIG+HFYP+WE+ + EWLYNGG Y+ +VLHF++GV+ +M Sbjct: 1 AGSLLYGNNIISGSLVPSSNAIGVHFYPVWESPAYYEWLYNGGSYQFVVLHFIVGVSAWM 60 Query: 128 GREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQ 187 GREWE SFRL MRPWI +AYSAPV A AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQ Sbjct: 61 GREWEFSFRLSMRPWIILAYSAPVTGAAAVFIVYPIGQGSFSDGMPLGISGTFNFMLVFQ 120 Query: 188 AEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYN 247 AEHNILMHPFH+LGVA VFGGSLFSAMHGSLVTSSL+ E+ + S N GY FGQ ETY+ Sbjct: 121 AEHNILMHPFHILGVAAVFGGSLFSAMHGSLVTSSLLAESAGDLSLNAGYNFGQVSETYS 180 Query: 248 IVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVV 307 I AAHGYFGRLIFQYASFNNSRSLHFFL AWPV+GIWFTALG+STMAFNLNG NFNQS+V Sbjct: 181 ISAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTALGVSTMAFNLNGLNFNQSIV 240 Query: 308 DSQGRVINTWADIINRANLGMEVM 331 DS G +I++WADI+NRA+LG+EVM Sbjct: 241 DSSGHLISSWADIMNRADLGIEVM 264 >gb|AAD49557.1| (AF107784) PsbA [Trichodesmium sp. IMS101] Length = 228 Score = 433 bits (1101), Expect = e-120 Identities = 200/228 (87%), Positives = 218/228 (94%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+GWFGVLMIPTLLTAT +IIAF+AAPPVDIDGIREPV+GSL++GNNIISGA++P+S A Sbjct: 1 YVGWFGVLMIPTLLTATICYIIAFVAAPPVDIDGIREPVAGSLMFGNNIISGAVVPSSNA 60 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 IGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL+G+ YMGREWELS+RLGMRPWI VAYS Sbjct: 61 IGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLIGIFTYMGREWELSYRLGMRPWICVAYS 120 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGG 208 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGG Sbjct: 121 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGG 180 Query: 209 SLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFG 256 SLFSAMHGSLVTSSL+RETTE ES N GY+FGQEEETYNIVAAHGYFG Sbjct: 181 SLFSAMHGSLVTSSLVRETTETESQNYGYKFGQEEETYNIVAAHGYFG 228 >pir||S24992 photosystem II protein D1 - common sunflower chloroplast (fragment) Length = 187 Score = 379 bits (964), Expect = e-104 Identities = 183/187 (97%), Positives = 185/187 (98%) Query: 167 SFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRE 226 SFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRE Sbjct: 1 SFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRE 60 Query: 227 TTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFT 286 TTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFT Sbjct: 61 TTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFT 120 Query: 287 ALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAV 346 ALGISTMAFNLNGFNFNQSVVDSQGRVIN+WADIIN ANLGMEVMHERNAHNFPLDLAA+ Sbjct: 121 ALGISTMAFNLNGFNFNQSVVDSQGRVINSWADIINPANLGMEVMHERNAHNFPLDLAAI 180 Query: 347 EAPSING 353 EAPS NG Sbjct: 181 EAPSTNG 187 >emb|CAA10627.1| (AJ132264) PSII D1 reaction-centre protein [Skeletonema costatum] Length = 205 Score = 375 bits (953), Expect = e-103 Identities = 181/204 (88%), Positives = 190/204 (92%), Gaps = 7/204 (3%) Query: 156 AVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMH 215 AVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMH Sbjct: 1 AVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMH 60 Query: 216 GSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL 275 GSLVTSSLIRETTENES N GY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL Sbjct: 61 GSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFL 120 Query: 276 AAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERN 335 A WPV+GIW TA+GISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRA+LGMEVMHERN Sbjct: 121 ALWPVLGIWLTAMGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERN 180 Query: 336 AHNFPLDLA-------AVEAPSIN 352 AHNFPLDLA A AP++N Sbjct: 181 AHNFPLDLASGDVLPVAFTAPAVN 204 >pir||S48682 D1 protein - Spinach Length = 232 Score = 375 bits (952), Expect = e-103 Identities = 217/343 (63%), Positives = 221/343 (64%), Gaps = 111/343 (32%) Query: 2 TAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDID 61 TAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPP Sbjct: 1 TAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPP---- 56 Query: 62 GIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLL 121 L G + + WE L F L Sbjct: 57 ---------FLLG--------------VACYMGREWE------------------LSFRL 75 Query: 122 GVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFN 181 G+ R W IAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFN Sbjct: 76 GM-----RPW-----------IAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFN 119 Query: 182 FMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQ 241 FMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENES Sbjct: 120 FMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENES--------- 170 Query: 242 EEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFN 301 IWFTALGISTMAFNLNGFN Sbjct: 171 -----------------------------------------IWFTALGISTMAFNLNGFN 189 Query: 302 FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 344 FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA Sbjct: 190 FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 232 >gb|AAA84549.1| (M16899) 32 kDa membrane protein [Pisum sativum] Length = 156 Score = 325 bits (824), Expect = 6e-88 Identities = 155/156 (99%), Positives = 156/156 (99%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERR+SENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRDSENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA 156 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA 156 >sp|Q01366|PSBA_PHAVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||S25494 photosystem II protein D1 - kidney bean chloroplast (fragment) emb|CAA48184.1| (X68048) Photosystem II 32kDa Q-B protein [Phaseolus vulgaris] Length = 147 Score = 280 bits (708), Expect = 2e-74 Identities = 135/146 (92%), Positives = 139/146 (94%) Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNN 267 GSLFSAMHGSLVTSSLIRE T NES NEGYRFG+EEETYNIV AHGYF RLI+QYASFNN Sbjct: 2 GSLFSAMHGSLVTSSLIREPTVNESPNEGYRFGREEETYNIVPAHGYFDRLIYQYASFNN 61 Query: 268 SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLG 327 SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTW DIINRANLG Sbjct: 62 SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWTDIINRANLG 121 Query: 328 MEVMHERNAHNFPLDLAAVEAPSING 353 MEVMHERNAHN PLDLAA+EAPS+NG Sbjct: 122 MEVMHERNAHNGPLDLAAMEAPSVNG 147 >gb|AAF89985.1|AF206711_1 (AF206711) PSII D1 reaction center protein [Protoceratium reticulatum] Length = 151 Score = 266 bits (673), Expect = 3e-70 Identities = 123/151 (81%), Positives = 138/151 (90%) Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240 NFM+VFQAEHNILMHPFH+LGVAGVFGGSLFSAMHGSLVTSSL+ E+ + S N GY FG Sbjct: 1 NFMLVFQAEHNILMHPFHILGVAGVFGGSLFSAMHGSLVTSSLLAESPGDVSLNIGYNFG 60 Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 QE+ETY+I AAHGYFGRLIFQYASFNNSRSLHFFL WPV+GIWFTALG+STMAFNLNG Sbjct: 61 QEDETYSISAAHGYFGRLIFQYASFNNSRSLHFFLGGWPVIGIWFTALGVSTMAFNLNGL 120 Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVM 331 NFNQS++DS G +IN+WADI+NRA+LGMEVM Sbjct: 121 NFNQSIIDSSGHLINSWADIMNRADLGMEVM 151 >dbj|BAA96363.1| (AB043963) photosystem II Qb protein [Bruguiera gymnorhiza] Length = 128 Score = 262 bits (662), Expect = 6e-69 Identities = 126/128 (98%), Positives = 126/128 (98%) Query: 226 ETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 285 ETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF Sbjct: 1 ETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 60 Query: 286 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 345 T LGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNA NFPLDLAA Sbjct: 61 TVLGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNALNFPLDLAA 120 Query: 346 VEAPSING 353 VEAPSING Sbjct: 121 VEAPSING 128 >gb|AAF08827.1| (AF193066) photosystem II Q(B) protein [Bassia scoparia] Length = 115 Score = 236 bits (597), Expect = 2e-61 Identities = 114/115 (99%), Positives = 114/115 (99%) Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNN 267 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYA FNN Sbjct: 1 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAGFNN 60 Query: 268 SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIIN 322 SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIIN Sbjct: 61 SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIIN 115 >pir||C31183 photosystem II protein D1 - barley chloroplast (fragment) Length = 109 Score = 226 bits (571), Expect = 3e-58 Identities = 108/109 (99%), Positives = 109/109 (99%) Query: 170 DGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTE 229 DGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTE Sbjct: 1 DGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTE 60 Query: 230 NESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAW 278 NESANEGY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAW Sbjct: 61 NESANEGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAW 109 >gb|AAC16320.1| (AF061287) D1 protein [Senecio vulgaris] Length = 92 Score = 195 bits (490), Expect = 8e-49 Identities = 92/92 (100%), Positives = 92/92 (100%) Query: 235 EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 294 EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA Sbjct: 1 EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 60 Query: 295 FNLNGFNFNQSVVDSQGRVINTWADIINRANL 326 FNLNGFNFNQSVVDSQGRVINTWADIINRANL Sbjct: 61 FNLNGFNFNQSVVDSQGRVINTWADIINRANL 92 >emb|CAA73828.1| (Y13398) D1 protein [Porphyra linearis] Length = 97 Score = 186 bits (468), Expect = 3e-46 Identities = 89/97 (91%), Positives = 92/97 (94%) Query: 201 GVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIF 260 GVAGVFGGSLFSAMHGSLVTSSLIRET+ENESAN GY+FGQEEETYNIVAAHGYFGRLIF Sbjct: 1 GVAGVFGGSLFSAMHGSLVTSSLIRETSENESANYGYKFGQEEETYNIVAAHGYFGRLIF 60 Query: 261 QYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297 QYASFNNSRSLHFFL WPVVGIW TAL +STMAFNL Sbjct: 61 QYASFNNSRSLHFFLGLWPVVGIWLTALSVSTMAFNL 97 >emb|CAA75354.1| (Y15074) D1 protein [Haslea ostrearia] Length = 95 Score = 181 bits (455), Expect = 1e-44 Identities = 85/95 (89%), Positives = 91/95 (95%) Query: 202 VAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQ 261 VAGVFGGSLFSAMHGSLVTSSLIRETTE+ES N GY+FGQEEETYNIVAAHGYFGRLIFQ Sbjct: 1 VAGVFGGSLFSAMHGSLVTSSLIRETTESESVNYGYKFGQEEETYNIVAAHGYFGRLIFQ 60 Query: 262 YASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFN 296 YASFNNSR+LHFFLA WPVVGIW T++G+STMAFN Sbjct: 61 YASFNNSRALHFFLALWPVVGIWLTSMGVSTMAFN 95 >prf||1006312A protein QB [Solanum nigrum] Length = 85 Score = 178 bits (448), Expect = 7e-44 Identities = 85/85 (100%), Positives = 85/85 (100%) Query: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV Sbjct: 1 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 60 Query: 307 VDSQGRVINTWADIINRANLGMEVM 331 VDSQGRVINTWADIINRANLGMEVM Sbjct: 61 VDSQGRVINTWADIINRANLGMEVM 85 >sp|P09192|PSBD_SYNY3 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||PS0097 photosystem II protein D2 - Synechocystis sp. (strain PCC 6803) dbj|BAA10851.1| (D64006) photosystem II D2 protein [Synechocystis sp.] gb|AAA85377.1| (M21538) psbD gene product [Synechocystis sp.] dbj|BAA17800.1| (D90909) photosystem II D2 protein [Synechocystis sp.] Length = 352 Score = 174 bits (436), Expect = 2e-42 Identities = 99/305 (32%), Positives = 165/305 (53%), Gaps = 10/305 (3%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT + R E W + + ++IGW G+L+ P A ++ Sbjct: 1 MTIAVGRAPVERGWFDVLDDWLKRDRFVFIGWSGLLLFPCAFMALGGWLTGTTFVTSWYT 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVL 117 G+ + S L G N ++ A+ + A G +W ++ W GG + + L Sbjct: 61 HGL----ASSYLEGANFLTVAVSSPADAFGHSLLFLWGPEAQGNLTRWFQIGGLWPFVAL 116 Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177 H G+ +M R++E+S +G+RP+ A+A+S P+A +VFL+YP+GQ S+ G++ Sbjct: 117 HGAFGLIGFMLRQFEISRLVGIRPYNAIAFSGPIAVFVSVFLMYPLGQSSWFFAPSFGVA 176 Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237 G F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L E E+ + + Sbjct: 177 GIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLF-EDGEDSNTFRAF 235 Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297 Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +++GI +A NL Sbjct: 236 EPTQAEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSSVGIVGLALNL 293 Query: 298 NGFNF 302 ++F Sbjct: 294 RAYDF 298 >sp|P51766|PSBD_PROHO PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) gb|AAA82944.1| (U40144) D2 [Prochlorothrix hollandica] Length = 351 Score = 173 bits (434), Expect = 3e-42 Identities = 102/306 (33%), Positives = 171/306 (55%), Gaps = 13/306 (4%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT + R + +W+ + +++GW G+L+ P A ++ A Sbjct: 1 MTTAVGRISDRGWFDVLDDWL-KRDRFVFVGWSGLLLFPCAYMAIGGWLTGTTFATSWYT 59 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIW----EAASVDEWLYNGGPYELIV 116 GI + S L G N ++ AI + ++G +W + A V W+ GG + Sbjct: 60 HGI----ASSYLEGCNFLTVAISTPADSMGHALLLLWGPEAQGAFV-RWVQLGGLWTFTA 114 Query: 117 LHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGI 176 LH + +M R++E++ +G+RP+ A+A+SAP+A +VFLIYP+GQ S+ G+ Sbjct: 115 LHGAFALIGFMLRQFEIARLVGVRPYNAIAFSAPIALFVSVFLIYPLGQSSWFFAPSFGV 174 Query: 177 SGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEG 236 + F F++ FQ HN ++PFHM+GVAGV GG+L A+HG+ V ++L E ++ + G Sbjct: 175 AAIFRFILFFQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLF-EDGDDATTFRG 233 Query: 237 YRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFN 296 + Q EETY++V A+ ++ + IF A F+N R LHFF+ PV+G+W +A+G+ +A N Sbjct: 234 FEPTQSEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVMGLWMSAIGVVGLALN 291 Query: 297 LNGFNF 302 L ++F Sbjct: 292 LRSYDF 297 >pir||S42646 photosystem II protein D2 - Anabaena sp. (strain PCC 7120) Length = 351 Score = 173 bits (434), Expect = 3e-42 Identities = 98/305 (32%), Positives = 166/305 (54%), Gaps = 11/305 (3%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT + R S + +W+ + +++GW G+L+ P A ++ Sbjct: 1 MTIAVGRAPSRGWFDVLDDWL-KRDRFVFVGWSGILLFPCAFLALGGWLTGTTFVTSWYT 59 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVL 117 G+ + S L G N ++ A+ + ++G +W + W GG + + L Sbjct: 60 HGL----ASSYLEGANFLTVAVSSPADSMGHSLLLLWGPEAQGDLTRWFQLGGLWPFVAL 115 Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177 H G+ +M R++E++ +G+RP+ A+A+SAP+A +VFL+YP+GQ S+ G++ Sbjct: 116 HGAFGLIGFMLRQFEIARLVGIRPYNALAFSAPIAVFVSVFLMYPLGQSSWFFAPSFGVA 175 Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237 F F++ Q HN ++PFHM+GVAGV GG+L A+HG+ V ++L E E + + Sbjct: 176 AIFRFLLFLQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLF-EDGEGANTFRAF 234 Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297 Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +A+GI +A NL Sbjct: 235 NPTQSEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSAVGIVGLALNL 292 Query: 298 NGFNF 302 ++F Sbjct: 293 RAYDF 297 >gi|11467543 PSII, D2 reaction-center protein [Odontella sinensis] sp|P49478|PSBD_ODOSI PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||S78348 photosystem II protein D2 - Odontella sinensis chloroplast emb|CAA91721.1| (Z67753) PSII, D2 reaction-center protein [Odontella sinensis] Length = 351 Score = 171 bits (429), Expect = 1e-41 Identities = 95/307 (30%), Positives = 168/307 (53%), Gaps = 15/307 (4%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT + + + L+ +W+ + ++IGW G+L+ PT A ++ Sbjct: 1 MTIAIGQNQERGLFDLIDDWLKK-DRFVFIGWSGLLLFPTAYLAAGGWMTGTTFVTSWYT 59 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117 G+ + S L G N ++ A+ + ++G +W + + W GG + I L Sbjct: 60 HGL----ASSYLEGCNFLTAAVSTPANSMGHSLLLLWGPEAQGDFTRWCQIGGLWAFIAL 115 Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177 H G+ + R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ G++ Sbjct: 116 HGAFGLIGFCLRQFEIARLVGIRPYNAIAFSGPIAVFVSVFLLYPLGQASWFFAPSFGVA 175 Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237 F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L + ++AN Sbjct: 176 AIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFE---DGDAANTFR 232 Query: 238 RF--GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295 F Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+GI +A Sbjct: 233 AFTPTQSEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLAL 290 Query: 296 NLNGFNF 302 NL ++F Sbjct: 291 NLRAYDF 297 >emb|CAA75405.1| (Y15137) D1 protein [Skeletonema costatum] Length = 89 Score = 170 bits (427), Expect = 2e-41 Identities = 80/89 (89%), Positives = 84/89 (93%) Query: 201 GVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIF 260 GVAGVFGGSLFSAMHGSLVTSSLIRETTENES N GY+FGQEEETYNIVAAHGYFGRLIF Sbjct: 1 GVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIF 60 Query: 261 QYASFNNSRSLHFFLAAWPVVGIWFTALG 289 QYASFNNSR+LHFFLA WPV+G W TA+G Sbjct: 61 QYASFNNSRALHFFLALWPVLGSWLTAMG 89 >sp|P20898|PSBD_SYNP2 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) gb|AAA79119.1| (M29659) photosystem II reaction center D2 protein [Synechococcus sp.] gb|AAB61354.1| (U36390) D2 protein of photosystem II [Synechococcus sp. PCC 7002] prf||1707315A photosystem II D2 protein [Synechococcus sp.] Length = 352 Score = 170 bits (427), Expect = 2e-41 Identities = 95/305 (31%), Positives = 165/305 (53%), Gaps = 10/305 (3%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT + R E W + + +++GW G+L+ P A ++ Sbjct: 1 MTIAVGRAPQERGWFDVLDDWLKRDRFVFVGWSGILLFPCAFMALGGWLTGTTFVTSWYT 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAS---VDEWLYNGGPYELIVL 117 G+ + S L G N ++ A+ + ++G +W + W GG + + L Sbjct: 61 HGL----ASSYLEGCNFLTVAVSSPADSLGHSLLFLWGPEANWNFARWCQLGGLWSFVAL 116 Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177 H G+ +M R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ G++ Sbjct: 117 HGAFGLIGFMLRQFEIARLVGIRPYNAIAFSGPIAVFVSVFLMYPLGQSSWFFAPSFGVA 176 Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237 G F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L E ++ + + Sbjct: 177 GIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLF-EDSDQANTFRAF 235 Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297 Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +++GI +A NL Sbjct: 236 EPTQAEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSSVGIVGLALNL 293 Query: 298 NGFNF 302 ++F Sbjct: 294 RAYDF 298 >sp|P11005|PSBD_SYNP7 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||JT0321 photosystem II protein D2 - Synechococcus sp. (strain PCC 7942) gb|AAA27357.1| (M20815) D2 thylakoid protein [Synechococcus sp.] gb|AAA27358.1| (M20814) psbDI thylakoid protein [Synechococcus sp.] Length = 352 Score = 170 bits (426), Expect = 3e-41 Identities = 96/305 (31%), Positives = 163/305 (52%), Gaps = 10/305 (3%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT + R +E W + + +++GW G+L+ P A ++ Sbjct: 1 MTIAVGRAPAERGWFDVLDDWLKRDRFVFVGWSGLLLFPCAYLALGGWLTGTSFVTSWYT 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVL 117 GI + S L G N ++ A+ + A G +W + W GG + + L Sbjct: 61 HGI----ASSYLEGGNFLTVAVSTPADAFGHSLMLLWGPEAQGNFVRWCQLGGLWNFVAL 116 Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177 H + +M R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ G++ Sbjct: 117 HGAFALIGFMLRQFEIARLVGVRPYNAIAFSGPIAVFVSVFLMYPLGQSSWFFAPSFGVA 176 Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237 F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L E +E + + Sbjct: 177 AIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLF-EDSEQSNTFRAF 235 Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297 Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +++GI +A NL Sbjct: 236 EPTQAEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSSIGIVGLALNL 293 Query: 298 NGFNF 302 ++F Sbjct: 294 RAYDF 298 >gi|11467390 D2 protein of the photosystem II reaction center core heterodimer [Cyanophora paradoxa] sp|P48079|PSBD_CYAPA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||T06935 photosystem II protein D2 - Cyanophora paradoxa cyanelle gb|AAA81278.1| (U30821) D2 protein of the photosystem II reaction center core heterodimer [Cyanophora paradoxa] Length = 352 Score = 169 bits (424), Expect = 5e-41 Identities = 91/305 (29%), Positives = 162/305 (52%), Gaps = 10/305 (3%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT + R +SE W + + +++GW G+L++P A + Sbjct: 1 MTVAIGRSDSERGWFDVLDDWLKRDRFVFLGWSGLLLLPCAYLAVGAWFTGTTFVTSWYT 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117 G+ + S L G N ++ A+ + ++G +W + + W GG + L Sbjct: 61 HGL----ASSYLEGCNFLTAAVSTPANSMGHSILFVWGPEAQGDFTRWCQIGGLWTFTAL 116 Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177 H LG+ + R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ + G++ Sbjct: 117 HGALGLIGFTLRQFEIARLIGLRPYNAIAFSGPIAVFVSVFLLYPLGQAGWFFAPSFGVA 176 Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237 F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Sbjct: 177 AIFRFLLFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGSNTFPAF 235 Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297 Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ + NL Sbjct: 236 NPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLGVNL 293 Query: 298 NGFNF 302 ++F Sbjct: 294 RAYDF 298 >sp|P28253|PSBD_CYACA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||F2KKD2 photosystem II protein D2 - red alga (Cyanidium caldarium) chloroplast emb|CAA44459.1| (X62578) D2 protein of PSII [Cyanidium caldarium] Length = 351 Score = 169 bits (423), Expect = 6e-41 Identities = 96/307 (31%), Positives = 165/307 (53%), Gaps = 15/307 (4%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT +ER L+ +W+ + ++IGW G+L+ P A + Sbjct: 1 MTIAIERNIQRGLFDLVDDWL-KRDRFVFIGWSGLLLFPCSYLALGAWFTGTTFVTSWYT 59 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117 G+ + S L G N ++ A+ + ++G +W + + W GG + L Sbjct: 60 HGL----ASSYLEGCNFLTAAVSSPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWTFTAL 115 Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177 H G+ + R++E++ +G+RP+ A+A+S P+A +VFLIYP+GQ S+ G++ Sbjct: 116 HGAFGLIGFCLRQFEIARLVGIRPYNAIAFSGPIAVFVSVFLIYPLGQASWFFAPSFGVA 175 Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237 F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L + E+AN Sbjct: 176 AIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFE---DGEAANTFR 232 Query: 238 RF--GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295 F Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +++GI +A Sbjct: 233 AFTPTQSEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWTSSIGIIGLAL 290 Query: 296 NLNGFNF 302 NL ++F Sbjct: 291 NLRAYDF 297 >gi|11466345 D2 reaction center protein of photosystem II [Mesostigma viride] gb|AAF43789.1|AF166114_1 (AF166114) D2 reaction center protein of photosystem II [Mesostigma viride] Length = 354 Score = 167 bits (419), Expect = 2e-40 Identities = 93/280 (33%), Positives = 155/280 (55%), Gaps = 14/280 (5%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 ++IGW G+L++P A F G+ + S L G N+++ A+ S Sbjct: 30 VFIGWSGLLLLPCAYFALGGFFTGNTFVTSWYTHGL----ASSYLEGCNVLTAAVSTPSN 85 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 A+G +W + + W GG + LH G+ +M R++E++ + +RP+ A Sbjct: 86 AMGHSLLLLWGPEAQGDFTRWCQLGGLWTFTALHGAFGLIGFMLRQFEIARAVKIRPYNA 145 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+S P+A +VFLIYP+GQ S+ G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 146 IAFSGPIAVFVSVFLIYPLGQQSWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 205 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG--QEEETYNIVAAHGYFGRLIFQY 262 V G +L A+HG+ V ++L + ++AN F Q EETY++V A+ ++ ++ Sbjct: 206 VLGAALLCAIHGATVENTLFE---DGDAANTFRAFNPTQSEETYSMVTANRFWSQIF--G 260 Query: 263 ASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 +F N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 261 VAFANKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 300 >gi|11467794 D2 reaction-center protein of photosystem II [Nephroselmis olivacea] gb|AAD54816.1|AF137379_39 (AF137379) D2 reaction-center protein of photosystem II [Nephroselmis olivacea] Length = 352 Score = 167 bits (419), Expect = 2e-40 Identities = 94/303 (31%), Positives = 165/303 (54%), Gaps = 11/303 (3%) Query: 3 AILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDG 62 AI E L+ +W+ + +++GW G+L++P A ++ G Sbjct: 4 AIGTPEEKRGLFDDMDDWLRR-DRFVFVGWSGLLLLPCAYFAVGGWLTGTTFVTSWYTHG 62 Query: 63 IREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHF 119 + + S L G N+++ A+ + ++ +W + + W GG + I LH Sbjct: 63 L----ASSYLEGCNVLTAAVSTPANSMAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHG 118 Query: 120 LLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGT 179 G+ +M R++E++ +G+RP+ A+A+S P++ +VFLIYP+GQ + G++ Sbjct: 119 SFGLIGFMLRQFEIARAIGLRPYNAIAFSGPISVFVSVFLIYPLGQSGWFFAPSFGVAAI 178 Query: 180 FNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRF 239 F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Sbjct: 179 FRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNP 237 Query: 240 GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNG 299 Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +A+G+ +A NL Sbjct: 238 TQAEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRA 295 Query: 300 FNF 302 ++F Sbjct: 296 YDF 298 >gi|11465589 unknown; Photosystem II D2 protein [Cyanidium caldarium] gb|AAF13026.1|AF022186_200 (AF022186) unknown; Photosystem II D2 protein [Cyanidium caldarium] Length = 351 Score = 166 bits (416), Expect = 4e-40 Identities = 92/305 (30%), Positives = 160/305 (52%), Gaps = 11/305 (3%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT + R + + +W+ + ++IGW G+L+ P A + Sbjct: 1 MTIAIGREQERGWFDLLDDWL-KRDRFVFIGWSGILLFPCAYLALGAWFTGTTFVSSWYT 59 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117 G+ + S L G N ++ A+ + ++G +W + + W GG + L Sbjct: 60 HGL----ASSYLEGCNFLTAAVSSPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWTFTAL 115 Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177 H G+ + R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ G++ Sbjct: 116 HGSFGLIGFCLRQFEIARLVGLRPYNAIAFSGPIAVFVSVFLLYPLGQASWFFAPSFGVA 175 Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237 F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L E E + Sbjct: 176 AIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLF-EDGEASDTFRAF 234 Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297 Q EETY++V A+ ++ ++ +F N R LHFFL PV G+W +++GI +A NL Sbjct: 235 TPTQSEETYSMVTANRFWSQIF--GVAFANKRWLHFFLLFVPVTGLWVSSIGIVGLALNL 292 Query: 298 NGFNF 302 ++F Sbjct: 293 RAYDF 297 >gi|7524716 PSII D2 protein [Pinus thunbergii] sp|P41644|PSBD_PINTH PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||T07549 photosystem II protein D2 - Japanese black pine chloroplast dbj|BAA04425.1| (D17510) PSII D2 protein [Pinus thunbergii] Length = 353 Score = 166 bits (416), Expect = 4e-40 Identities = 90/298 (30%), Positives = 160/298 (53%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 +E + L+ +W+ + +++GW G+L+ P A + G+ Sbjct: 10 KEEKTLFDTVDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + W GG + + LH G+ Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDLTRWCQLGGLWTFVALHGAFGLI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++EL+ + +RP+ A+A+SAP+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 299 >gb|AAG26177.1| (AF123821) photosystem II D2 protein [Ginkgo biloba] Length = 326 Score = 165 bits (413), Expect = 9e-40 Identities = 88/278 (31%), Positives = 153/278 (54%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A + A G+ + S L G N ++ A+ + Sbjct: 2 VFVGWSGLLLFPCAYFALGGWFTGTTFATSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 117 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 118 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSEETYSMVTANRFWSQIF--GVA 234 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 272 >gi|11465823 Photosystem II D2 protein [Porphyra purpurea] sp|P51357|PSBD_PORPU PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||S73278 photosystem II protein D2 - red alga (Porphyra purpurea) chloroplast gb|AAC08243.1| (U38804) Photosystem II D2 protein [Porphyra purpurea] Length = 351 Score = 164 bits (411), Expect = 2e-39 Identities = 91/305 (29%), Positives = 164/305 (52%), Gaps = 11/305 (3%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT + + ++ + +W+ + +++GW G+L+ P A ++ Sbjct: 1 MTIAIGQEKTRGGFDLVDDWL-KRDRFVFVGWSGLLLFPCAYLAVGGWLTGTTFVTSWYT 59 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117 G+ + S L G N ++ A+ + ++G +W + + W GG + I L Sbjct: 60 HGL----ASSYLEGCNFLTAAVSTPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWAFIAL 115 Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177 H G+ + R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ LG++ Sbjct: 116 HGSFGLIGFCLRQFEIARLVGLRPYNAIAFSGPIAVFVSVFLMYPLGQASWFFAPSLGVA 175 Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237 F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L E + + Sbjct: 176 AIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVQNTLF-EDGDAADTFRAF 234 Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297 Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A GI +A NL Sbjct: 235 TPTQSEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWTSAFGIVGLALNL 292 Query: 298 NGFNF 302 ++F Sbjct: 293 RAYDF 297 >pir||F2PMD2 photosystem II protein D2 - garden pea chloroplast Length = 353 Score = 164 bits (411), Expect = 2e-39 Identities = 89/298 (29%), Positives = 159/298 (52%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 ++ +L+ +W+ + +++GW G+L+ P A + G+ Sbjct: 10 KDQNDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + W GG + + LH G+ Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDLTRWCQLGGLWTFVALHGAFGLI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299 >gi|11466698 psbD [Marchantia polymorpha] sp|P06404|PSBD_MARPO PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||F2LVD2 photosystem II protein D2 - liverwort (Marchantia polymorpha) chloroplast emb|CAA28080.1| (X04465) psbD [Marchantia polymorpha] Length = 353 Score = 164 bits (411), Expect = 2e-39 Identities = 89/298 (29%), Positives = 160/298 (52%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 +E + L+ +W+ + +++GW G+L+ P A + G+ Sbjct: 10 KEPKGLFDSMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + + W GG + + LH G+ Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 299 >gb|AAG44374.1| (AF235043) photosystem II D2 protein [Amborella trichopoda] Length = 326 Score = 164 bits (410), Expect = 2e-39 Identities = 88/278 (31%), Positives = 152/278 (54%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A + G+ + S L G N ++ A+ + Sbjct: 2 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 117 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 118 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 234 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 272 >gb|AAG26171.1| (AF123818) photosystem II D2 protein [Cercidiphyllum japonicum] gb|AAG26187.1| (AF123826) photosystem II D2 protein [Saururus cernuus] Length = 325 Score = 164 bits (410), Expect = 2e-39 Identities = 88/278 (31%), Positives = 152/278 (54%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A + G+ + S L G N ++ A+ + Sbjct: 1 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 56 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A Sbjct: 57 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 116 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 117 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 176 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 177 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 233 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 234 FSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 271 >gb|AAG26169.1| (AF123817) photosystem II D2 protein [Ceratophyllum demersum] Length = 325 Score = 164 bits (410), Expect = 2e-39 Identities = 88/278 (31%), Positives = 152/278 (54%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A + G+ + S L G N ++ A+ + Sbjct: 1 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 56 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A Sbjct: 57 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 116 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 117 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 176 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 177 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 233 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 234 FSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 271 >gi|7524799 photosystem II D2 protein [Chlorella vulgaris] sp|P56319|PSBD_CHLVU PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||T07229 photosystem II protein D2 - Chlorella vulgaris chloroplast dbj|BAA57876.1| (AB001684) photosystem II D2 protein [Chlorella vulgaris] Length = 352 Score = 164 bits (410), Expect = 2e-39 Identities = 91/303 (30%), Positives = 164/303 (54%), Gaps = 11/303 (3%) Query: 3 AILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDG 62 AI + +E L+ +W+ + +++GW G+L+ PT A + G Sbjct: 4 AIGKTQEKRGLFDVVDDWLRR-DRFVFVGWSGLLLFPTAYLALGGWFTGTTFVTSWYTHG 62 Query: 63 IREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHF 119 + + S L G N ++ A+ + ++G +W + + W GG + + LH Sbjct: 63 L----ATSYLEGCNFLTAAVSTPANSMGHSLLFLWGPEAQGDFTRWCQLGGLWTFVALHG 118 Query: 120 LLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGT 179 + +M R++E++ + +RP+ A+A+SAP++ +VFLIYP+GQ + G++ Sbjct: 119 SFALIGFMLRQFEIARSVKIRPYNAIAFSAPISVFVSVFLIYPLGQSGWFFAPSFGVAAI 178 Query: 180 FNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRF 239 F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Sbjct: 179 FRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNP 237 Query: 240 GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNG 299 Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL Sbjct: 238 TQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRA 295 Query: 300 FNF 302 ++F Sbjct: 296 YDF 298 >gb|AAG26182.1| (AF123823) photosystem II D2 protein [Illicium parviflorum] gb|AAG26189.1| (AF123827) photosystem II D2 protein [Trochodendron aralioides] Length = 324 Score = 163 bits (409), Expect = 3e-39 Identities = 88/277 (31%), Positives = 151/277 (53%), Gaps = 10/277 (3%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 ++GW G+L+ P A + G+ + S L G N ++ A+ + + Sbjct: 1 FVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANS 56 Query: 89 IGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145 + +W + + W GG + + LH G+ +M R++EL+ + +RP+ A+ Sbjct: 57 LAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAI 116 Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGV 205 A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV Sbjct: 117 AFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGV 176 Query: 206 FGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASF 265 G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +F Sbjct: 177 LGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAF 233 Query: 266 NNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 +N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 234 SNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 270 >emb|CAA58959.1| (X84154) D2 protein, photosystem II subunit [Antirrhinum majus] Length = 353 Score = 163 bits (409), Expect = 3e-39 Identities = 89/298 (29%), Positives = 160/298 (52%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 ++ +L+ +W+ + +++GW G+L+ P A + G+ Sbjct: 10 KDENDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + + W GG + + LH G+ Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299 >gi|11465949 PSII D2 protein [Nicotiana tabacum] sp|P06403|PSBD_TOBAC PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||F2NTD2 photosystem II protein D2 - common tobacco chloroplast pir||S52397 photosystem II protein D2 - garden snapdragon chloroplast emb|CAA77347.1| (Z00044) PSII D2 protein [Nicotiana tabacum] emb|CAA58960.1| (X84155) photosystem I subunit [Antirrhinum majus] prf||1211235V photosystem II D2 protein [Nicotiana tabacum] Length = 353 Score = 163 bits (409), Expect = 3e-39 Identities = 89/298 (29%), Positives = 160/298 (52%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 ++ +L+ +W+ + +++GW G+L+ P A + G+ Sbjct: 10 KDENDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + + W GG + + LH G+ Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299 >gb|AAG26167.1| (AF123816) photosystem II D2 protein [Calycanthus floridus] Length = 326 Score = 163 bits (408), Expect = 3e-39 Identities = 87/278 (31%), Positives = 152/278 (54%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A + G+ + S L G N ++ A+ + Sbjct: 2 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 117 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 118 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 234 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 272 >sp|P06006|PSBD_PEA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) gb|AAB59335.1| (M27309) D2 photosystem II protein [Pisum sativum] Length = 353 Score = 163 bits (408), Expect = 3e-39 Identities = 88/298 (29%), Positives = 160/298 (53%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 ++ +L+ +W+ + +++GW G+L+ P A + G+ Sbjct: 10 KDQNDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + W GG + + LH G+ Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDLTRWCQLGGLWTFVALHGAFGLI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN ++PFHM+GVAGV G +L A+HG++V ++L E + + + Q EE Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGAIVENTLF-EDGDGANTFRAFNPTQAEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R L+FF+ PV G+W +ALG+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLYFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299 >prf||1209190A photosystem II protein D2 [Chlamydomonas reinhardtii] Length = 363 Score = 163 bits (408), Expect = 3e-39 Identities = 86/278 (30%), Positives = 153/278 (54%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A ++ G+ + S L G N ++ A+ + Sbjct: 39 VFVGWSGLLLFPCAYFALGGWLTGTTFVTSWYTHGL----ATSYLEGCNFLTAAVSTPAN 94 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++E++ + +RP+ A Sbjct: 95 SMAHSLLFVWGPEAQGDFTRWCQLGGLWAFVALHGAFGLIGFMLRQFEIARSVNLRPYNA 154 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 155 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 214 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 215 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 271 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 272 FSNKRWLHFFMLLVPVTGLWMSAIGVVGLALNLRAYDF 309 >sp|P06007|PSBD_CHLRE PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||A25466 photosystem II protein D2 - Chlamydomonas reinhardtii chloroplast emb|CAA27766.1| (X04147) D2 protein (aa 1-352) [Chlamydomonas reinhardtii] Length = 352 Score = 163 bits (408), Expect = 3e-39 Identities = 86/278 (30%), Positives = 153/278 (54%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A ++ G+ + S L G N ++ A+ + Sbjct: 28 VFVGWSGLLLFPCAYFALGGWLTGTTFVTSWYTHGL----ATSYLEGCNFLTAAVSTPAN 83 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++E++ + +RP+ A Sbjct: 84 SMAHSLLFVWGPEAQGDFTRWCQLGGLWAFVALHGAFGLIGFMLRQFEIARSVNLRPYNA 143 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 144 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 203 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 204 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 260 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 261 FSNKRWLHFFMLLVPVTGLWMSAIGVVGLALNLRAYDF 298 >gb|AAG26186.1| (AF123825) photosystem II D2 protein [Liriodendron tulipifera] Length = 324 Score = 162 bits (407), Expect = 5e-39 Identities = 87/277 (31%), Positives = 151/277 (54%), Gaps = 10/277 (3%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 ++GW G+L+ P A + G+ + S L G N ++ A+ + + Sbjct: 1 FVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANS 56 Query: 89 IGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145 + +W + + W GG + + LH G+ +M R++EL+ + +RP+ A+ Sbjct: 57 LAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAI 116 Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGV 205 A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV Sbjct: 117 AFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGV 176 Query: 206 FGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASF 265 G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +F Sbjct: 177 LGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAF 233 Query: 266 NNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 +N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 234 SNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 270 >gb|AAG26180.1| (AF123822) photosystem II D2 protein [Gnetum gnemon] Length = 323 Score = 162 bits (407), Expect = 5e-39 Identities = 89/276 (32%), Positives = 150/276 (54%), Gaps = 10/276 (3%) Query: 30 IGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAI 89 IGW G+L+ P A + G+ + S L G N ++ A+ + ++ Sbjct: 1 IGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANSL 56 Query: 90 GLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVA 146 +W + + W GG + + LH G+ +M R++EL+ + +RP+ A+A Sbjct: 57 AHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIA 116 Query: 147 YSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVF 206 +SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV Sbjct: 117 FSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVL 176 Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFN 266 G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +F+ Sbjct: 177 GAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAFS 233 Query: 267 NSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 N R LHFFL PV G+W +A+G+ +A NL ++F Sbjct: 234 NKRWLHFFLLFVPVTGLWMSAIGVVGLALNLRAYDF 269 >gb|AAG26163.1| (AF123814) photosystem II D2 protein [Asarum canadense] Length = 323 Score = 162 bits (406), Expect = 6e-39 Identities = 88/276 (31%), Positives = 150/276 (53%), Gaps = 10/276 (3%) Query: 30 IGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAI 89 +GW G+L+ P A + G+ + S L G N ++ A+ + ++ Sbjct: 1 VGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANSL 56 Query: 90 GLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVA 146 +W + + W GG + + LH G+ +M R++EL+ + +RP+ A+A Sbjct: 57 AHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIA 116 Query: 147 YSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVF 206 +SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV Sbjct: 117 FSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVL 176 Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFN 266 G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +F+ Sbjct: 177 GAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAFS 233 Query: 267 NSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 234 NKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 269 >gb|AAG26161.1| (AF123813) photosystem II D2 protein [Acorus calamus] gb|AAG26184.1| (AF123824) photosystem II D2 protein [Lactoris fernandeziana] Length = 325 Score = 162 bits (406), Expect = 6e-39 Identities = 87/278 (31%), Positives = 151/278 (54%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A + G+ + S L G N ++ A+ + Sbjct: 1 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 56 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A Sbjct: 57 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 116 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 117 IAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 176 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 177 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 233 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 234 FSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 271 >gb|AAF82675.1| (AF188854) photosystem II D2 protein [Nymphaea odorata] Length = 326 Score = 162 bits (406), Expect = 6e-39 Identities = 87/278 (31%), Positives = 151/278 (54%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A + G+ + S L G N ++ A+ + Sbjct: 2 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 117 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 118 IAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 234 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 272 >gi|11467626 PSII D2 reaction-center protein [Guillardia theta] sp|O78427|PSBD_GUITH PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) gb|AAC35612.1| (AF041468) PSII D2 reaction-center protein [Guillardia theta] Length = 351 Score = 162 bits (406), Expect = 6e-39 Identities = 91/307 (29%), Positives = 165/307 (53%), Gaps = 15/307 (4%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT + + E + +W+ + ++IGW G+L+ PT + + I + Sbjct: 1 MTIAIGQEEGRGWFDLVDDWL-KRDRFVFIGWSGLLLFPT----SYLSIGGWFTGTTFVT 55 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117 ++ S L G N + A+ + ++G +W + + W GG + L Sbjct: 56 SWYTHGLASSYLEGCNFFTAAVSTPANSMGHSLLLLWGPEAQGDFTRWCQIGGLWAFCAL 115 Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177 H G+ + R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ LG++ Sbjct: 116 HGAFGLIGFCLRQFEIARLVGIRPYNAIAFSGPIAIFVSVFLMYPLGQASWFFAPSLGVA 175 Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237 F F++ Q HN ++PFHM+GVAG+ G +L A+HG+ V +++ + ++AN Sbjct: 176 AIFRFLLFIQGFHNFTLNPFHMMGVAGILGAALLCAIHGATVQNTIFE---DGDAANTFR 232 Query: 238 RF--GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295 F Q EETY++V A+ ++ ++ +F+N R LHFF+ P+ G+W +A+GI +A Sbjct: 233 AFTPTQSEETYSMVTANRFWSQVF--GVAFSNKRWLHFFMLFVPLAGLWTSAIGIVGLAL 290 Query: 296 NLNGFNF 302 NL ++F Sbjct: 291 NLRAYDF 297 >dbj|BAA83458.1| (AB013682) photosystem II protein D2 [Adiantum capillus-veneris] Length = 299 Score = 162 bits (405), Expect = 8e-39 Identities = 87/278 (31%), Positives = 151/278 (54%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ PT A + G+ + S L G N ++ A+ + Sbjct: 6 VFVGWSGLLLFPTAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 61 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH + +M R++EL+ + +RP+ A Sbjct: 62 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGSFALIGFMLRQFELARSVQLRPYNA 121 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 VA+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 122 VAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 181 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 182 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSEETYSMVTANRFWSQIF--GVA 238 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 239 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 276 >gb|AAD24582.1|AF134324_1 (AF134324) Qa-binding protein PsbD [Populus deltoides] Length = 353 Score = 162 bits (405), Expect = 8e-39 Identities = 90/298 (30%), Positives = 160/298 (53%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 ++ +L+ +W+ + +++GW G+L+ P A + G Sbjct: 10 KDENDLFDIMDDWLRR-DRFVFVGWSGLLVFPCAYFALGGWFTGTTFVTSWYTHGW---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + + W GG + + LH G+ Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGFWTFVALHGAFGLI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++EL+ + +RP+ A+A+SAP+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299 >gi|11497520 PSII D2 protein [Spinacia oleracea] sp|P06005|PSBD_SPIOL PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||F2SPD2 photosystem II protein D2 [validated] - spinach chloroplast gb|AAA84633.1| (M27308) D2 photosystem II protein [Spinacia oleracea] gb|AAA84630.1| (M36833) 32 Kd-like protein [Spinacia oleracea] emb|CAB88721.1| (AJ400848) PSII D2 protein [Spinacia oleracea] Length = 353 Score = 162 bits (405), Expect = 8e-39 Identities = 88/298 (29%), Positives = 160/298 (53%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 ++ ++L+ +W+ + +++GW G+L+ P A + G+ Sbjct: 10 KDEKDLFDSMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + + W GG + + LH + Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFALI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299 >gb|AAG26165.1| (AF123815) photosystem II D2 protein [Cabomba caroliniana] Length = 326 Score = 161 bits (404), Expect = 1e-38 Identities = 86/278 (30%), Positives = 151/278 (53%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A + G+ + S L G N ++ A+ + Sbjct: 2 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 117 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 118 IAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 234 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 272 >sp|P11849|PSBD_HORVU PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||A31183 photosystem II protein D2 - barley chloroplast gb|AAA84047.1| (M38290) membrane polypeptide D2 [Hordeum vulgare] Length = 353 Score = 161 bits (404), Expect = 1e-38 Identities = 91/307 (29%), Positives = 163/307 (52%), Gaps = 13/307 (4%) Query: 1 MTAILER--RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPV 58 MT L R +E +L+ +W+ + +++GW G+L+ P A + Sbjct: 1 MTIALGRVPKEENDLFDTMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSW 59 Query: 59 DIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELI 115 G+ + S L G N ++ A+ + ++ +W + + W GG + + Sbjct: 60 YTHGL----ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFV 115 Query: 116 VLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLG 175 LH + +M R++EL+ + +RP+ A+++S P+A +VFLIYP+GQ + G Sbjct: 116 ALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSGWFFAPSFG 175 Query: 176 ISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235 ++ F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + Sbjct: 176 VAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFR 234 Query: 236 GYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295 + Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A Sbjct: 235 AFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLAL 292 Query: 296 NLNGFNF 302 NL ++F Sbjct: 293 NLRAYDF 299 >sp|P10803|PSBD_SECCE PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||S03435 photosystem II protein D2 - rye chloroplast emb|CAA31743.1| (X13366) D2 polypeptide (AA 1 - 353) [Secale cereale] Length = 353 Score = 161 bits (404), Expect = 1e-38 Identities = 91/307 (29%), Positives = 163/307 (52%), Gaps = 13/307 (4%) Query: 1 MTAILER--RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPV 58 MT L R +E +L+ +W+ + +++GW G+L+ P A + Sbjct: 1 MTIALGRIPKEENDLFDTMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSW 59 Query: 59 DIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELI 115 G+ + S L G N ++ A+ + ++ +W + + W GG + + Sbjct: 60 YTHGL----ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFV 115 Query: 116 VLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLG 175 LH + +M R++EL+ + +RP+ A+++S P+A +VFLIYP+GQ + G Sbjct: 116 ALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSGWFFAPSFG 175 Query: 176 ISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235 ++ F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + Sbjct: 176 VAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFR 234 Query: 236 GYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295 + Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A Sbjct: 235 AFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLAL 292 Query: 296 NLNGFNF 302 NL ++F Sbjct: 293 NLRAYDF 299 >gi|7525028 PSII D2 protein [Arabidopsis thaliana] sp|P56761|PSBD_ARATH PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) dbj|BAA84380.1| (AP000423) PSII D2 protein [Arabidopsis thaliana] Length = 353 Score = 161 bits (403), Expect = 1e-38 Identities = 88/298 (29%), Positives = 160/298 (53%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 ++ ++L+ +W+ + +++GW G+L+ P A + G+ Sbjct: 10 KDEKDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + + W GG + + LH + Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFALI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299 >pir||S00929 photosystem II protein D2 - barley chloroplast emb|CAA30401.1| (X07522) D2 protein (psbD) (AA 1-353) [Hordeum vulgare] Length = 353 Score = 161 bits (402), Expect = 2e-38 Identities = 91/307 (29%), Positives = 163/307 (52%), Gaps = 13/307 (4%) Query: 1 MTAILER--RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPV 58 MT L R +E +L+ +W+ + +++GW G+L+ P A + Sbjct: 1 MTIALGRVPKEENDLFDTMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSW 59 Query: 59 DIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELI 115 G+ + S L G N ++ A+ + ++ +W + + W GG + + Sbjct: 60 YTHGL----ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFV 115 Query: 116 VLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLG 175 LH + +M R++EL+ + +RP+ A+++S P+A +VFLIYP+GQ + G Sbjct: 116 ALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSDWFFPPDFG 175 Query: 176 ISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235 ++ F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + Sbjct: 176 VAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFR 234 Query: 236 GYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295 + Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A Sbjct: 235 AFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLAL 292 Query: 296 NLNGFNF 302 NL ++F Sbjct: 293 NLRAYDF 299 >gi|11466770 PSII D2 protein [Oryza sativa] sp|P12095|PSBD_ORYSA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||F2RZD2 photosystem II protein D2 - rice chloroplast emb|CAA34013.1| (X15901) PSII D2 protein [Oryza sativa] prf||1603356G photosystem II D2 protein [Oryza sativa] Length = 353 Score = 161 bits (402), Expect = 2e-38 Identities = 91/307 (29%), Positives = 163/307 (52%), Gaps = 13/307 (4%) Query: 1 MTAILER--RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPV 58 MT L R +E +L+ +W+ + +++GW G+L+ P A + Sbjct: 1 MTIALGRVTKEENDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSW 59 Query: 59 DIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELI 115 G+ + S L G N ++ A+ + ++ +W + + W GG + + Sbjct: 60 YTHGL----ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFV 115 Query: 116 VLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLG 175 LH + +M R++EL+ + +RP+ A+++S P+A +VFLIYP+GQ + G Sbjct: 116 ALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSGWFFAPSFG 175 Query: 176 ISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235 ++ F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + Sbjct: 176 VAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFR 234 Query: 236 GYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295 + Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A Sbjct: 235 AFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLAL 292 Query: 296 NLNGFNF 302 NL ++F Sbjct: 293 NLRAYDF 299 >gi|11466982 PSII D2-polypeptide [Euglena gracilis] sp|P31557|PSBD_EUGGR PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||S34495 photosystem II protein D2 - Euglena gracilis chloroplast emb|CAA50076.1| (X70810) PSII D2-polypeptide [Euglena gracilis] Length = 352 Score = 159 bits (398), Expect = 5e-38 Identities = 91/297 (30%), Positives = 160/297 (53%), Gaps = 10/297 (3%) Query: 9 ESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVS 68 E++N W + + ++IGW G+L+ P A ++ G+ + Sbjct: 9 ENKNGWFDVADDWLKKDRFIFIGWSGLLLFPCSYLALGGWLTGITFVTSWYTHGL----A 64 Query: 69 GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAS---VDEWLYNGGPYELIVLHFLLGVAC 125 S L G N ++ A+ ++G + + + WL GG + I LH G+ Sbjct: 65 SSFLEGCNALTAAVSTPPNSMGHSLLLLLGSEAQWDFTRWLQIGGLWPFIALHGAFGLIG 124 Query: 126 YMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIV 185 +M R++E++ + +RP+ A+A+SAP++ +VFLIYP+GQ + G++ F F++ Sbjct: 125 FMLRQFEIAKAVQIRPYNAIAFSAPISVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILF 184 Query: 186 FQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEET 245 FQ HN ++PFHM+GVAGV G +L A+HG+ V +++ E ++ + + Q EET Sbjct: 185 FQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTIF-EDGDSPNTFRAFNPLQSEET 243 Query: 246 YNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 Y++V A+ ++ ++ +F+N R LHFF+ PV G+ +ALGI +A NL ++F Sbjct: 244 YSMVTANRFWSQIF--GVAFSNKRWLHFFMVFVPVTGLRMSALGIVGLALNLRAYDF 298 >gb|AAG26173.1| (AF123819) photosystem II D2 protein [Dioscorea bulbifera] Length = 321 Score = 159 bits (397), Expect = 7e-38 Identities = 87/274 (31%), Positives = 148/274 (53%), Gaps = 10/274 (3%) Query: 32 WFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGL 91 W G+L+ P A + G+ + S L G N ++ A+ + ++ Sbjct: 1 WSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANSLAH 56 Query: 92 HFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 +W + + W GG + + LH G+ +M R++EL+ + +RP+ A+A+S Sbjct: 57 SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFS 116 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGG 208 AP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV G Sbjct: 117 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGA 176 Query: 209 SLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNS 268 +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +F+N Sbjct: 177 ALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAFSNK 233 Query: 269 RSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 234 RWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 267 >gb|AAF73303.1| (AF188848) photosystem II D2 protein [Zamia furfuracea] Length = 326 Score = 159 bits (397), Expect = 7e-38 Identities = 85/278 (30%), Positives = 150/278 (53%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+ + P A + G+ + S L G N ++ A+ + Sbjct: 2 VFVGWSGLXLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + H G+ +M R++EL+ + +RP+ A Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQFELARSVQLRPYNA 117 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 118 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSEETYSMVTANRFWSQIF--GVA 234 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 272 >emb|CAB67144.1| (AJ271079) PSII D2 protein [Oenothera elata subsp. hookeri] Length = 353 Score = 159 bits (397), Expect = 7e-38 Identities = 86/298 (28%), Positives = 159/298 (52%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 ++ ++L+ +W+ + +++GW G+L+ P A + G+ Sbjct: 10 KDEKDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + + W GG + + LH + Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFALI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++E++ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFEIARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN ++PFHM+G+AGV G +L A+HG+ V +L E + + + Q EE Sbjct: 185 FFQGFHNWTLNPFHMMGIAGVLGAALLCAIHGATVEYTLF-EDGDGANTFRAFNPTQAEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299 >dbj|BAA83431.1| (AB013655) photosystem II protein D2 [Physcomitrella patens] Length = 290 Score = 158 bits (396), Expect = 9e-38 Identities = 84/278 (30%), Positives = 150/278 (53%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P + + G+ + S L G N ++ A+ + Sbjct: 1 VFVGWSGLLLFPCAYFSLGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 56 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH + +M R++EL+ + +RP+ A Sbjct: 57 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFALIGFMLRQFELARSVQLRPYNA 116 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 117 IAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 176 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 177 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSEETYSMVTANRFWSQIF--GVA 233 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 234 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 271 >dbj|BAA83437.1| (AB013661) photosystem II protein D2 [Coleochaete nitellarum] Length = 331 Score = 158 bits (395), Expect = 1e-37 Identities = 85/278 (30%), Positives = 151/278 (53%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A ++ G+ + S L G N ++ A+ + Sbjct: 7 VFVGWSGLLLFPCAYFALGGWLTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 62 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A Sbjct: 63 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 122 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A++ P++ +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG Sbjct: 123 IAFTGPISIFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 182 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L A+HG+ V ++L E + + + Q EETY+ V A+ ++ ++ + Sbjct: 183 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQNEETYSFVTANRFWSQIF--GVA 239 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F+N R LHFF+ PV G+W +A+GI +A NL ++F Sbjct: 240 FSNKRWLHFFMLFVPVSGLWASAIGIVGLAVNLRAYDF 277 >gi|11467176 PSII D2 protein [Zea mays] sp|P48184|PSBD_MAIZE PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN) pir||S58536 photosystem II protein D2 - maize chloroplast emb|CAA60270.1| (X86563) PSII D2 protein [Zea mays] Length = 353 Score = 156 bits (391), Expect = 3e-37 Identities = 87/298 (29%), Positives = 157/298 (52%), Gaps = 11/298 (3%) Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67 +E +L+ +W+ + +++GW G+L+ P A + G+ Sbjct: 10 KEENDLFPLIDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64 Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124 + S L G N ++ A+ + ++ +W + + W GG + + LH + Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWSQLGGLWTFLALHGAFALI 124 Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184 +M R++EL+ + +RP+ A+++S P+A +VFLIYP+GQ + G++ F F++ Sbjct: 125 GFMLRQFELARPVQLRPYNAISFSGPIAVFLSVFLIYPLGQSGWFFSPSFGVAAIFRFIL 184 Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244 FQ HN + PFHM+GVAGV G L A+HG+ V ++L E + + + Q EE Sbjct: 185 FFQGFHNWTLKPFHMMGVAGVLGAVLLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243 Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 299 >gb|AAG26175.1| (AF123820) photosystem II D2 protein [Drimys winteri] Length = 319 Score = 156 bits (390), Expect = 4e-37 Identities = 79/239 (33%), Positives = 138/239 (57%), Gaps = 6/239 (2%) Query: 67 VSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGV 123 ++ S L G N ++ A+ + ++ +W + + W GG + + LH G+ Sbjct: 30 LASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGL 89 Query: 124 ACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM 183 +M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F+ Sbjct: 90 IGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFI 149 Query: 184 IVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEE 243 + FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q E Sbjct: 150 LFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAE 208 Query: 244 ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 ETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 209 ETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 265 >dbj|BAA83448.1| (AB013672) photosystem II protein D2 [Sphagnum fallax] Length = 278 Score = 155 bits (389), Expect = 6e-37 Identities = 79/239 (33%), Positives = 138/239 (57%), Gaps = 6/239 (2%) Query: 67 VSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGV 123 ++ S L G N ++ A+ + ++ +W + + W GG + + LH + Sbjct: 28 LASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFAL 87 Query: 124 ACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM 183 +M R++EL+ + +RP+ A+A+SAP+A +VFLIYP+GQ + G++ F F+ Sbjct: 88 IGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFI 147 Query: 184 IVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEE 243 + FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q E Sbjct: 148 LFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSE 206 Query: 244 ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 ETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 207 ETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 263 >gb|AAD10228.1| (U72055) photosystem II protein D1 [Anabaena sp. CA] Length = 95 Score = 155 bits (387), Expect = 1e-36 Identities = 69/95 (72%), Positives = 83/95 (86%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MT L++R++ N+W RFC WITST+NR+Y+GWFGVLMIPTLL AT F+IAFIAAP VDI Sbjct: 1 MTTTLQQRQNANVWERFCEWITSTDNRIYVGWFGVLMIPTLLAATVCFVIAFIAAPLVDI 60 Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYP 95 DGIREPV+GSL+ GNNII GA++P+S AIGLHFYP Sbjct: 61 DGIREPVAGSLICGNNIICGAVVPSSNAIGLHFYP 95 >dbj|BAA83453.1| (AB013677) photosystem II protein D2 [Haplomitrium mnioides] Length = 280 Score = 148 bits (369), Expect = 1e-34 Identities = 76/239 (31%), Positives = 135/239 (55%), Gaps = 6/239 (2%) Query: 67 VSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGV 123 ++ S L G N ++ A+ + ++ +W + + W GG + + LH G+ Sbjct: 29 LASSYLEGCNSLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGL 88 Query: 124 ACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM 183 +M R++EL+ + +RP+ A+A+S P+A +VF I+P+GQ + G++ F F+ Sbjct: 89 IGFMPRQFELARSVQLRPYNAIAFSGPIAVFVSVFPIHPLGQSGWFFAPSFGVAAIFRFI 148 Query: 184 IVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEE 243 + Q HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q E Sbjct: 149 LFLQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSE 207 Query: 244 ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 ETY++V A+ + ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 208 ETYSMVTANRFRSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 264 >dbj|BAA83443.1| (AB013667) photosystem II protein D2 [Anthoceros punctatus] Length = 314 Score = 146 bits (364), Expect = 5e-34 Identities = 81/278 (29%), Positives = 147/278 (52%), Gaps = 10/278 (3%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +++GW G+L+ P A + G+ + S L G N ++ A+ + Sbjct: 5 VFVGWSGLLLFPCAYFALGGWFTGTTFVSSRYTHGL----ASSYLEGCNFLTAAVSTSVN 60 Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144 ++ +W + + W GG + + LH G+ +M R++EL+ + +R + A Sbjct: 61 SLAHFLLLLWGPEAQGDFTCWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRLYNA 120 Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204 +A+S P+A +VFLIYP+GQ + + G++ F++ FQ HN ++ FHM+GVAG Sbjct: 121 IAFSGPIAVFVSVFLIYPLGQSGWFFALSFGVAAISRFILFFQGFHNWTLNLFHMMGVAG 180 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264 V G +L ++G+ V ++L E + + + Q EETY++V A+ ++ ++ + Sbjct: 181 VLGVALLCVIYGATVENTLF-EDGDGANTFRAFNPTQSEETYSMVTANRFWSQIF--GVA 237 Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302 F N R LHFF+ PV G+W +A+G+ +A NL ++F Sbjct: 238 FPNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 275 >gb|AAA84105.1| (M19053) thylakoid membrane protein [Chenopodium album] Length = 69 Score = 144 bits (360), Expect = 1e-33 Identities = 69/69 (100%), Positives = 69/69 (100%) Query: 212 SAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL 271 SAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL Sbjct: 1 SAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL 60 Query: 272 HFFLAAWPV 280 HFFLAAWPV Sbjct: 61 HFFLAAWPV 69 >sp|P12463|PSBA_WHEAT PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN) (PHOTOSYSTEM II PROTEIN D1) pir||JA0146 photosystem II protein D1 - wheat chloroplast (fragment) gb|AAA84729.1| (M21352) 32 kd protein (psbA) [Triticum aestivum] Length = 70 Score = 143 bits (356), Expect = 4e-33 Identities = 68/70 (97%), Positives = 69/70 (98%) Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60 Query: 61 DGIREPVSGS 70 DGIREPVSGS Sbjct: 61 DGIREPVSGS 70 >gb|AAB29963.1| photosystem II core D1 protein {Ala251Val substitution, secondary quinone electron acceptor pocket} [Synechocystis, PCC 6714, M35, metribuzin-resistant, Peptide Partial Mutant, 65 aa] Length = 65 Score = 114 bits (282), Expect = 2e-24 Identities = 58/68 (85%), Positives = 60/68 (87%), Gaps = 3/68 (4%) Query: 210 LFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSR 269 LFSAMHGSLVTSSL+RETTE ES N GY+FGQEEETYNIVA H GRLIFQYASFNNSR Sbjct: 1 LFSAMHGSLVTSSLVRETTEVESQNYGYKFGQEEETYNIVAVH---GRLIFQYASFNNSR 57 Query: 270 SLHFFLAA 277 SLHFFL A Sbjct: 58 SLHFFLGA 65 >gb|AAB29962.1| photosystem II core D1 protein {Ile248Thr substitution, secondary quinone electron acceptor pocket} [Synechocystis, PCC 6714, M30, metribuzin-resistant, Peptide Partial Mutant, 65 aa] Length = 65 Score = 113 bits (281), Expect = 3e-24 Identities = 58/68 (85%), Positives = 60/68 (87%), Gaps = 3/68 (4%) Query: 210 LFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSR 269 LFSAMHGSLVTSSL+RETTE ES N GY+FGQEEETYN VAAH GRLIFQYASFNNSR Sbjct: 1 LFSAMHGSLVTSSLVRETTEVESQNYGYKFGQEEETYNTVAAH---GRLIFQYASFNNSR 57 Query: 270 SLHFFLAA 277 SLHFFL A Sbjct: 58 SLHFFLGA 65 >pir||S09188 photosystem II 32K protein - spinach (fragments) Length = 88 Score = 103 bits (255), Expect = 3e-21 Identities = 51/73 (69%), Positives = 56/73 (75%) Query: 195 HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGY 254 HPFHMLGVAGVFGGSLFSA HGSLVTSSLIRETTENESANEGYRFGQEE T+ + Sbjct: 1 HPFHMLGVAGVFGGSLFSANHGSLVTSSLIRETTENESANEGYRFGQEENTWADIINRAN 60 Query: 255 FGRLIFQYASFNN 267 G + + +N Sbjct: 61 LGMEVMHERNAHN 73 Score = 83.5 bits (203), Expect = 4e-15 Identities = 38/43 (88%), Positives = 40/43 (92%) Query: 311 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353 G+ NTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG Sbjct: 46 GQEENTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 88 >dbj|BAB19668.1| (AB028938) photosynthetic reaction center M subunit [Roseateles depolymerans] Length = 326 Score = 68.3 bits (164), Expect = 1e-10 Identities = 48/193 (24%), Positives = 86/193 (43%), Gaps = 21/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+GW G+ + I FIA + ++ + + + + A+ P Sbjct: 51 IYLGWLGLCSL----------ICGFIAIEIIGLNMLASVNWNPIQFVRQLPWLALEPPPP 100 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 A GLH P L GG + L L + + R + + +LGM +A A+ Sbjct: 101 ANGLHLPP----------LNQGGWWLLAGLFLTTSILLWWVRMYRRARKLGMGTHVAWAF 150 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 +A + + +I P+ GSF + +P GI ++ F + N+ +PFHML + ++ Sbjct: 151 AAAIWLYLVLGIIRPVLMGSFGEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHMLSIVFLY 210 Query: 207 GGSLFSAMHGSLV 219 G +L AMHG+ + Sbjct: 211 GSTLLFAMHGATI 223 >dbj|BAA34815.1| (AB020599) photosynthetic reaction center L subunit [Porphyrobacter tepidarius] Length = 245 Score = 64.8 bits (155), Expect = 2e-09 Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 34/219 (15%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV L T++ A P ++ I +I P Sbjct: 2 YVGFFGVTTAIAALLGTALIFAAATQGPTLNPWLI-----------------SINPPPVE 44 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL F P+ E GG +++I + ++ ++ R+ E+S +LGM + +A+S Sbjct: 45 YGLAFAPLKE----------GGYWQVITICAVIAFGSWVMRQAEISRKLGMSYHVPIAFS 94 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207 V A + +I P+ G++++G P GI ++ V A N +P HML + F Sbjct: 95 VAVFAYVTLNVIRPVWMGAWANGFPYGIWTHLVWVSNVGYAFGNFHYNPVHMLAITFFFT 154 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 L A+HG LV S++ N + + + E+TY Sbjct: 155 NCLALALHGGLVLSAV------NPTGGTDVKSPEYEDTY 187 >dbj|BAA25722.1| (AB011074) photosynthetic reaction center L subunit [Agrobacterium sanguineum] Length = 245 Score = 64.4 bits (154), Expect = 2e-09 Identities = 56/219 (25%), Positives = 97/219 (43%), Gaps = 34/219 (15%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV + L T++ A P ++ I +I P S Sbjct: 2 YVGFFGVTTAISALLGTALIFAAAAQGPTLNPWLI-----------------SINPPSIE 44 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL F P+ E GG +++I ++ + ++ R+ E+S +LGM + +A+ Sbjct: 45 AGLAFAPLSE----------GGYWQVITACAVVAFSSWVLRQAEISRKLGMSYHVPIAFG 94 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207 V A + +I P+ G++ +G P GI +++ V A N +P HML + F Sbjct: 95 VAVFAYVTLNVIRPLWMGAWGNGFPYGIWTHLDWVSNVGYAFGNFHYNPVHMLAITFFFT 154 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 L A+HG LV S++ N + + + E+TY Sbjct: 155 NCLALALHGGLVLSAV------NPTGGTDVKTPEYEDTY 187 >sp|O66141|RCEL_ACIOR REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L SUBUNIT) dbj|BAA25565.1| (AB005222) L subunit of photosynthetic reaction center complex [Acidiphilium organovorum] Length = 254 Score = 64.0 bits (153), Expect = 3e-09 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 34/219 (15%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV ++ T++ I P +I I +I P + Sbjct: 7 YVGFFGVTAAFFIMLGTALIIWGAALGPTWNIWQI-----------------SIAPPDLS 49 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P L GG +++I + + + RE E+S +LG+ + A+S Sbjct: 50 YGLGLAP----------LAKGGLWQIITVCAIGAFGSWALREVEISRKLGIGLHVPAAFS 99 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207 + A + +I P+ G++ +G P GI +++ A N +P HM+ V F Sbjct: 100 VAIFAYVTLEVIRPLLMGAWGNGFPYGIMSHLDWVSNTGYAYLNFEYNPMHMVAVTLFFT 159 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 +L A+HGSLV +++ N A E +F + E+T+ Sbjct: 160 TTLALALHGSLVLAAI------NPPAGETVKFAEHEDTF 192 >sp|O66139|RCEL_ACIMU REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L SUBUNIT) dbj|BAA25563.1| (AB005221) L subunit of photosynthetic reaction center complex [Acidiphilium multivorum] Length = 255 Score = 64.0 bits (153), Expect = 3e-09 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 34/219 (15%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV ++ T++ I P +I I +I P + Sbjct: 8 YVGFFGVTAAFFIMLGTALIIWGAALGPTWNIWQI-----------------SIAPPDLS 50 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P L GG +++I + + + RE E+S +LG+ + A+S Sbjct: 51 YGLGLAP----------LAKGGLWQIITVCAIGAFGSWALREVEISRKLGIGLHVPAAFS 100 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207 + A + +I P+ G++ +G P GI +++ A N +P HM+ V F Sbjct: 101 VAIFAYVTLEVIRPLLMGAWGNGFPYGIMSHLDWVSNTGYAYLNFEYNPMHMVAVTLFFT 160 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 +L A+HGSLV +++ N A E +F + E+T+ Sbjct: 161 TTLALALHGSLVLAAI------NPPAGETVKFAEHEDTF 193 >sp|O66137|RCEL_ACICY REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L SUBUNIT) dbj|BAA25561.1| (AB005220) L subunit of photosynthetic reaction center complex [Acidiphilium cryptum] Length = 252 Score = 64.0 bits (153), Expect = 3e-09 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 34/219 (15%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV ++ T++ I P +I I +I P + Sbjct: 5 YVGFFGVTAAFFIMLGTALIIWGAALGPTWNIWQI-----------------SIAPPDLS 47 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P L GG +++I + + + RE E+S +LG+ + A+S Sbjct: 48 YGLGLAP----------LAKGGLWQIITVCAIGAFGSWALREVEISRKLGIGLHVPAAFS 97 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207 + A + +I P+ G++ +G P GI +++ A N +P HM+ V F Sbjct: 98 VAIFAYVTLEVIRPLLMGAWGNGFPYGIMSHLDWVSNTGYAYLNFEYNPMHMVAVTLFFT 157 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 +L A+HGSLV +++ N A E +F + E+T+ Sbjct: 158 TTLALALHGSLVLAAI------NPPAGETVKFAEHEDTF 190 >dbj|BAA96516.1| (AB035570) L subunit of photosynthetic reaction center [Erythrobacter longus] Length = 278 Score = 63.6 bits (152), Expect = 4e-09 Identities = 57/222 (25%), Positives = 94/222 (41%), Gaps = 40/222 (18%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVD---IDGIREPVSGSLLYGNNIISGAIIPT 85 Y+G+FGVL+ + T + A A P ++ ID I P Sbjct: 31 YVGFFGVLVAISAALGTMLIFAAAAAGPTLNPWLID--------------------IQPP 70 Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145 + GL F P+ E GG +++I L ++ ++ R+ E+S +LGM + + Sbjct: 71 AIEAGLAFAPLNE----------GGYHQIITLCAVIAFGSWVLRQAEISRKLGMGYHVPI 120 Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAG 204 A+S V A + +I P G++ P GI +++ + N +P HML + Sbjct: 121 AFSVAVFAFVTLNIIRPFWMGAWGHAFPYGIWSHLDWVSYTGYNYVNFHYNPVHMLAITF 180 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 F L A+HG LV S++ N R + E+TY Sbjct: 181 FFTNCLALALHGGLVLSAV------NVGKGNEVRSPEYEDTY 216 >dbj|BAA32995.1| (AB015708) photosynthetic reaction center L subunit [Erythrobacter sp.] Length = 249 Score = 63.6 bits (152), Expect = 4e-09 Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 40/222 (18%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVD---IDGIREPVSGSLLYGNNIISGAIIPT 85 Y+G+FGVL+ + L T + A I P ++ ID I P Sbjct: 2 YVGFFGVLVAISALLGTMLIFAAAIEGPTLNPWLID--------------------IQPP 41 Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145 + + GL P+ E GG +++I ++ + ++ R+ E+S +LGM I + Sbjct: 42 AESYGLGLAPLSE----------GGYWQVITACAIVAFSSWVLRQAEISRKLGMSLHIPI 91 Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAG 204 A+S V A + +I P+ G++ G P GI +++ N +P HML + Sbjct: 92 AFSFAVFAYFTLVVIRPVWMGAWYHGFPYGIWSHLDWVSNTGYMYANFHYNPVHMLAITF 151 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 F L A+HG LV S++ N S + + E+TY Sbjct: 152 FFTNCLALALHGGLVLSAV------NPSDGTDVKTPEYEDTY 187 >dbj|BAA22646.1| (D50651) photosynthetic reaction center M subunit [Rhodocyclus tenuis] Length = 257 Score = 63.6 bits (152), Expect = 4e-09 Identities = 48/193 (24%), Positives = 85/193 (43%), Gaps = 21/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 LY+G+ GV + + FIA + ++ + + + + A+ P A Sbjct: 51 LYLGFTGVASL----------VCGFIAIEIIGLNMAAQVGWSPMEFVRQLPWLALEPPPA 100 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 GL F P L GG + + L + + R + + LGM +A A+ Sbjct: 101 KYGLSFPP----------LAKGGWWLMAGFFLTLSILLFWVRTYRRAVALGMGTHVAWAF 150 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 ++ + + I P+ GS+S+ +P GI ++ F + N+ PFHML +A ++ Sbjct: 151 ASAIWLYLVLGFIRPVMMGSWSEAVPFGIFAHLDWTAAFSIRYGNLYYDPFHMLSIAFMY 210 Query: 207 GGSLFSAMHGSLV 219 G +L AMHG+ V Sbjct: 211 GATLLFAMHGATV 223 >sp|P11695|RCEL_CHLAU REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L SUBUNIT) pir||WNJXL photosynthetic reaction center chain L - Chloroflexus aurantiacus emb|CAA33102.1| (X14979) reaction center protein [Chloroflexus aurantiacus] prf||1703253A photosyn reaction center L [Chloroflexus aurantiacus] Length = 311 Score = 63.6 bits (152), Expect = 4e-09 Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 29/260 (11%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G++G + + ++ + +I I P I N +G I P Sbjct: 65 YVGFWGFVSVIGIIFGSYFYINETILKGPYSIP-------------QNFFAGRIDPPPPE 111 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 +GL F E G +++ VL + +M R+ ++S +L M + +A+ Sbjct: 112 LGLGFAAPGEP---------GFAWQMTVLFATIAFFGWMMRQVDISMKLDMGYHVPIAFG 162 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN-ILMHPFHMLGVAGVFG 207 +A + +I PI G + +G LGI +++ F +N +PFH +G+ G+F Sbjct: 163 VAFSAWLVLQVIRPIALGMWHEGFVLGIMPHLDWVSNFGYRYNNFFYNPFHAIGITGLFA 222 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNN 267 + A HGSL+ S+ + E + F ++ + Y++ + + IF Sbjct: 223 STWLLACHGSLILSA--AQYRGPEGGDIENVFFRDVQYYSVGESGVHRLGYIFAIGGI-L 279 Query: 268 SRSLHFFLAAWPV---VGIW 284 S L L+ WPV V W Sbjct: 280 SADLCILLSGWPVQDWVSFW 299 >dbj|BAA22639.1| (D50648) photosynthetic reaction center L subunit [Erythrobacter longus] Length = 280 Score = 62.8 bits (150), Expect = 6e-09 Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 40/222 (18%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVD---IDGIREPVSGSLLYGNNIISGAIIPT 85 Y+G+FGVL+ + T + A A P ++ ID I P Sbjct: 10 YVGFFGVLVAISAALGTMLIFAAAAAGPTLNPWLID--------------------IQPP 49 Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145 + GL F P+ E GG +++I L ++ ++ R+ E+S +LGM + + Sbjct: 50 AIEAGLAFAPLNE----------GGYHQIITLCAVIAFGSWVLRQAEISRKLGMGYHVPI 99 Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAG 204 A+S V A + +I P G++ P GI +++ + N +P HML + Sbjct: 100 AFSVAVFAFVTLNIIRPFWMGAWGHAFPYGIWSHLDWVSYTGYNYVNFHYNPVHMLAITF 159 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 F L A HG LV S++ N R + E+TY Sbjct: 160 FFTNCLALAXHGGLVLSAV------NVGKGXAVRSPEYEDTY 195 >dbj|BAA25901.1| (AB010873) photosynthetic reaction center L subunit [Erythromicrobium ramosum] Length = 244 Score = 62.5 bits (149), Expect = 8e-09 Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 34/219 (15%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV + L T + A P ++ I +I P Sbjct: 1 YVGFFGVTTAISALLGTMLIFAAATQGPTLNPWLI-----------------SINPPPVE 43 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P+ + GG +++I ++ ++ R+ E+S +LGM + +A+S Sbjct: 44 YGLSLAPMAQ----------GGYWQIITCCAVVAFVSWVLRQAEISRKLGMSYHVPIAFS 93 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207 V A ++ +I P+ G++ +G P GI ++ V A N +P HML ++ F Sbjct: 94 VAVFAYVSLNVIRPLWMGAWGNGFPYGIWTHLEWVSNVGYAFGNFHYNPVHMLAISFFFT 153 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 +L A+HG LV S++ N S + + E+TY Sbjct: 154 NALALALHGGLVLSAV------NPSGGTDVKSPEYEDTY 186 >dbj|BAA32999.1| (AB015710) photosynthetic reaction center L subunit [Erythrobacter sp.] Length = 244 Score = 61.3 bits (146), Expect = 2e-08 Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 17/166 (10%) Query: 82 IIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRP 141 I P S GL F P+ E GG +++I + ++ + ++ R+ E+S +LGM Sbjct: 33 IQPPSIEAGLSFAPLSE----------GGYWQVITICAVVAFSSWVMRQAEISRKLGMNY 82 Query: 142 WIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHML 200 + +A++ V A + +I P+ G++ G P GI +++ + N +P HM+ Sbjct: 83 HVPIAFAVAVFAYVTLNVIRPVWMGAWGHGFPYGIWSHLDWVSYTGYNYVNFHYNPVHMI 142 Query: 201 GVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 + F L A+HG LV S++ N R + E+TY Sbjct: 143 AITFFFTNCLALALHGGLVLSAV------NVGKGNEVRSPEYEDTY 182 >dbj|BAA32997.1| (AB015709) photosynthetic reaction center L subunit [Erythrobacter sp.] Length = 245 Score = 61.3 bits (146), Expect = 2e-08 Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 17/166 (10%) Query: 82 IIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRP 141 I P S GL F P+ E GG +++I + ++ + ++ R+ E+S +LGM Sbjct: 34 IQPPSIEAGLSFAPLSE----------GGYWQVITICAVVAFSSWVMRQAEISKKLGMNY 83 Query: 142 WIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHML 200 + +A++ V A + +I P+ G++ G P GI +++ + N +P HM+ Sbjct: 84 HVPIAFAVAVFAYVTLNVIRPVWMGAWGHGFPYGIWSHLDWVSYTGYNYVNFHYNPVHMI 143 Query: 201 GVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 + F L A+HG LV S++ N R + E+TY Sbjct: 144 AITFFFTNCLALALHGGLVLSAV------NVGKGNEVRSPEYEDTY 183 >dbj|BAA78672.1| (AB027515) photosynthetic reaction center L subunit [Erythrobacter sp. MBIC3960] Length = 278 Score = 60.9 bits (145), Expect = 2e-08 Identities = 57/222 (25%), Positives = 94/222 (41%), Gaps = 40/222 (18%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVD---IDGIREPVSGSLLYGNNIISGAIIPT 85 Y+G+FGV + L T++ A I P ++ ID I P Sbjct: 31 YVGFFGVTAAISALLGTALIFAAAIEGPTLNPWLID--------------------IQPP 70 Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145 + GL P+ E GG +++I L+ ++ R+ E+S +LGM + Sbjct: 71 ALENGLGLAPLSE----------GGYWQIITACALVAFGSWVLRQAEISRKLGMTLHVPF 120 Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAG 204 A+S V A + +I P+ G++ G P GI +++ N +P HML +A Sbjct: 121 AFSVAVFAYFTLVVIRPVWMGAWYHGFPYGIWSHLDWVSNTGYMYANFHYNPVHMLAIAF 180 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 F L A+HG LV S++ N + + + E+TY Sbjct: 181 FFTNCLALALHGGLVLSAV------NTTGGTDVKTPEYEDTY 216 >sp|P51763|RCEM_CHRVI REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTHETIC REACTION CENTER M SUBUNIT) dbj|BAA32741.1| (AB011811) M subunit of reaction center complex [Allochromatium vinosum] Length = 325 Score = 60.9 bits (145), Expect = 2e-08 Identities = 46/193 (23%), Positives = 90/193 (45%), Gaps = 21/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+G+ G L I + ++FII F VD + I+ + + + P + Sbjct: 51 IYLGFTGTLSI--IFGFMAIFIIGFNMLASVDWNIIQ--------FVKHFFWLGLEPPAP 100 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 GL P+ E GG + + + + + R ++ + LGM ++ A+ Sbjct: 101 QYGLTIPPLSE----------GGWWLMAGFFLTMSILLWWVRTYKRAEALGMSQHLSWAF 150 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 +A + ++ I P+ GS+++ +P GI ++ F + N+ +PFHML +A ++ Sbjct: 151 AAAIFFYLSLGFIRPVMMGSWAEAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLY 210 Query: 207 GGSLFSAMHGSLV 219 G +L AMHG+ + Sbjct: 211 GSALLFAMHGATI 223 >dbj|BAA25903.1| (AB011073) photosynthetic reaction center L subunit [Porphyrobacter neustonensis] Length = 246 Score = 60.1 bits (143), Expect = 4e-08 Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 34/219 (15%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV + L T + A P ++ I +I P Sbjct: 3 YVGFFGVTTAISALLGTMLIFAAATQGPTLNPWLI-----------------SINPPPVE 45 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P L GG +++I ++ + ++ R+ E+S +LGM + +A++ Sbjct: 46 YGLSLAP----------LAQGGYWQIITCCAVIAFSSWVLRQAEISRKLGMSYHVPIAFA 95 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207 V A ++ +I P+ G++ +G P GI ++ V A N +P HML + F Sbjct: 96 VAVFAYVSLNVIRPLWMGAWGNGFPYGIWTHLEWVSNVGYAFGNFHYNPVHMLAITFFFT 155 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 L A+HG LV S++ N + + + E+TY Sbjct: 156 NCLALALHGGLVLSAV------NPTRGTDVKTPEYEDTY 188 >pir||T10820 photosynthetic reaction center L - Rhodospirillum photometricum (fragment) dbj|BAA09329.1| (D50681) photosynthetic reaction center L subunit [Rhodospirillum photometricum] Length = 255 Score = 59.7 bits (142), Expect = 5e-08 Identities = 47/167 (28%), Positives = 77/167 (45%), Gaps = 19/167 (11%) Query: 82 IIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRP 141 I P + GL F P L GG ++LI + + C+ R+ E++ +LGM Sbjct: 46 IAPPDLSYGLGFAP----------LMKGGLWQLITICAIGRFCCWALRQVEIARKLGMGL 95 Query: 142 WIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHM 199 I A+S + A A+ +I P+ G++ G P GI +++ I +Q H +P HM Sbjct: 96 HIPFAFSFAIFAYLALVVIRPLLLGAWGHGXPYGILSHLDWVSNIGYQFLH-FHYNPAHM 154 Query: 200 LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 +G+ F + MHGS++ S L N E + + E T+ Sbjct: 155 IGITFFFTNCMAFGMHGSIILSVL------NPGKGEKVKGSEHENTF 195 >sp|P51750|RCEL_RHOPH REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L SUBUNIT) Length = 255 Score = 59.7 bits (142), Expect = 5e-08 Identities = 47/167 (28%), Positives = 77/167 (45%), Gaps = 19/167 (11%) Query: 82 IIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRP 141 I P + GL F P L GG ++LI + + C+ R+ E++ +LGM Sbjct: 46 IAPPDLSYGLGFAP----------LMKGGLWQLITICAIGRFCCWALRQVEIARKLGMGL 95 Query: 142 WIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHM 199 I A+S + A A+ +I P+ G++ G P GI +++ I +Q H +P HM Sbjct: 96 HIPFAFSFAIFAYLALVVIRPLLLGAWGHGXPYGILSHLDWVSNIGYQFLH-FHYNPAHM 154 Query: 200 LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 +G+ F + MHGS++ S L N E + + E T+ Sbjct: 155 IGITFFFTNCMAFGMHGSIILSVL------NPGKGEKVKGSEHENTF 195 >gb|AAA84544.1| (M16865) psbA peptide [Pisum sativum] Length = 27 Score = 59.7 bits (142), Expect = 5e-08 Identities = 27/27 (100%), Positives = 27/27 (100%) Query: 327 GMEVMHERNAHNFPLDLAAVEAPSING 353 GMEVMHERNAHNFPLDLAAVEAPSING Sbjct: 1 GMEVMHERNAHNFPLDLAAVEAPSING 27 >sp|P10718|RCEM_RHORU REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTHETIC REACTION CENTER M SUBUNIT) pir||B28170 reaction center protein chain M - Rhodospirillum rubrum gb|AAA26465.1| (J03731) photoreaction center M subunit [Rhodospirillum rubrum] Length = 306 Score = 59.7 bits (142), Expect = 5e-08 Identities = 45/193 (23%), Positives = 83/193 (42%), Gaps = 21/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+G GVL + + F A + + + + +G + P +A Sbjct: 50 IYLGTTGVLSL----------VFGFFAIEIIGFNLLASVNWSPMEFGRQFFWLGLEPPAA 99 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 GL F P+ E GG +++ + + R + + L M A A+ Sbjct: 100 EYGLGFAPLAE----------GGWWQIAGFFLTTSILLWWVRMYRRARALKMGTHTAWAF 149 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 ++ + ++ I P+ G+FS+ +P GI + F + N +PFHML +A ++ Sbjct: 150 ASAIFLFLSLGFIRPLLMGNFSESVPFGIFPHLEWTNSFSLNYGNFFYNPFHMLSIAFLY 209 Query: 207 GGSLFSAMHGSLV 219 G +L SAMHG+ + Sbjct: 210 GSALLSAMHGATI 222 >dbj|BAA87900.1| (AB018690) photosynthetic reaction center M subunit [alpha proteobacterium MBIC3951] Length = 254 Score = 59.3 bits (141), Expect = 7e-08 Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 11/140 (7%) Query: 81 AIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMR 140 A+ P S GL P L +GG Y + L+ V+C+ R + L+ + M Sbjct: 98 ALEPPSPEYGLRMPP----------LNDGGWYIISSFFLLVSVSCWWLRTYSLAEQHKMG 147 Query: 141 PWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHM 199 +A A++A + + L PI GS+S+ +P GI ++ F + N+ +PFH Sbjct: 148 KHVAWAFAAAIWLFLVLGLFRPILMGSWSEAVPYGIFPHLDWTTAFSIRYGNLYYNPFHG 207 Query: 200 LGVAGVFGGSLFSAMHGSLV 219 L + ++G L AMHG+ + Sbjct: 208 LSIVFLYGSVLLFAMHGATI 227 >dbj|BAA25551.1| (AB005218) L subunit of photosynthetic reaction center complex [Acidiphilium rubrum] dbj|BAA25558.1| (AB005219) L subunit of photosynthetic reaction center complex [Acidiphilium angustum] Length = 278 Score = 59.3 bits (141), Expect = 7e-08 Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 34/219 (15%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV+ L T++ I P +I I I P + Sbjct: 31 YVGFFGVIGGFFTLLGTALIIWGAAIGPTWNIWQIN-----------------IAPPDLS 73 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL F P L +GG +++I + + + + RE E+S +LG+ + A+S Sbjct: 74 YGLGFAP----------LAHGGLWQIITICAVGSFSSWALREVEISRKLGIGLHVPAAFS 123 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFG 207 + A + +I P+ G++ G P GI +++ + N +P HM+ V F Sbjct: 124 VAIFAYVTLEVIRPLLMGAWGVGFPYGIMSHLDWVSNTGYNYINFEYNPMHMVAVTLFFT 183 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 + A+HGSLV +++ N + E +F + E+T+ Sbjct: 184 TTFALALHGSLVLAAI------NPAKGEVVKFTEHEDTF 216 >sp|P51761|RCEM_RHOGE REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTHETIC REACTION CENTER M SUBUNIT) pir||F49964 photosynthetic reaction center complex M subunit, PufM - Rhodocyclus gelatinosus pir||T50890 photosynthetic reaction center complex chain M [imported] - Rubrivivax gelatinosus dbj|BAA04101.1| (D16822) photosynthetic reaction center M subunit [Rubrivivax gelatinosus] dbj|BAA94043.1| (AB034704) M subunit of photosynthetic reaction center complex [Rubrivivax gelatinosus] Length = 325 Score = 59.3 bits (141), Expect = 7e-08 Identities = 48/193 (24%), Positives = 86/193 (43%), Gaps = 21/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+G G+L I + + ++ II F V + I + A+ P S Sbjct: 52 IYLGPLGILSI--VFGSLAIMIIGFNMLASVGWNPIE--------FFRQFFWLALEPPSP 101 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 GL P L +GG + + L + + + R + + LGM +A A+ Sbjct: 102 KYGLKLPP----------LNDGGWWLMAGLFLTISILLWWVRMYTRARALGMGTHVAWAF 151 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 +A + + I P+ GS+S+ +P GI ++ F + N+ +PFH L +A ++ Sbjct: 152 AAAIWLYLVLGFIRPVLMGSWSEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHALSIAFLY 211 Query: 207 GGSLFSAMHGSLV 219 G +L AMHG+ + Sbjct: 212 GATLLFAMHGATI 224 >pdb|1EYS|M Chain M, Crystal Structure Of Photosynthetic Reaction Center From A Thermophilic Bacterium, Thermochromatium Tepidum Length = 324 Score = 58.9 bits (140), Expect = 9e-08 Identities = 33/117 (28%), Positives = 61/117 (51%), Gaps = 1/117 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + L L + + R ++ + LGM ++ A++A + + I P+ Sbjct: 108 LSEGGWWLIAGLFLTLSILLWWVRTYKRAEALGMSQHLSWAFAAAIFFYLVLGFIRPVMM 167 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLVTS 221 GS++ +P GI ++ F + N+ +PFHML +A ++G +L AMHG+ + S Sbjct: 168 GSWAKAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLYGSALLFAMHGATILS 224 >gb|AAG42645.1| (AF182374) photosynthetic reaction center M subunit [Bradyrhizobium sp. ORS278] Length = 308 Score = 58.9 bits (140), Expect = 9e-08 Identities = 51/208 (24%), Positives = 86/208 (40%), Gaps = 31/208 (14%) Query: 84 PTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWI 143 P + GL +P L GG + + + + R + + LG+ + Sbjct: 97 PPAPEYGLQIFPP---------LQEGGWWLMAGFFLTTSILLWWARTYRRARALGLGTHV 147 Query: 144 AVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGV 202 + A+++ + + I PI GS+S+ +P GI ++ F H N+ +PFHML + Sbjct: 148 SWAFASAIWLYLVLGFIRPIFMGSWSEAVPFGIFPHLDWTNNFSITHGNLFYNPFHMLSI 207 Query: 203 AGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYF--GRLIF 260 A ++G +L AMHG+ V + R+G E E IV F G L + Sbjct: 208 AFLYGSALLFAMHGATVLAI--------------SRYGGERELEQIVDRGTAFERGALFW 253 Query: 261 QYASFNNSRSLHFFLAAWPVVGIWFTAL 288 ++ N+ + AW WF L Sbjct: 254 RWTMGFNATAESIHRWAW-----WFAVL 276 >dbj|BAA22650.1| (D50653) photosynthetic reaction center M subunit [Thiocystis gelatinosa] Length = 257 Score = 58.9 bits (140), Expect = 9e-08 Identities = 51/223 (22%), Positives = 96/223 (42%), Gaps = 35/223 (15%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+G+ G L + + ++ II F VD I + N+ A+ P + Sbjct: 51 IYLGFAGTLSL--IFGFFAIEIIGFNMLASVDWSPIE--------FVRNLFWLALEPPAP 100 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 GL P+ E GG + + + + R ++ + LGM ++ A+ Sbjct: 101 QYGLSIPPLSE----------GGWWLMAGFFLTASILLWWVRTYKRAEALGMSQHLSWAF 150 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 ++ + + I PI GS+++ +P GI ++ F + N+ +PFHM+ +A ++ Sbjct: 151 ASAIFFYLCLGFIRPIMMGSWAEAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMVSIAFLY 210 Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIV 249 G +L AMHG+ + + R+G + E Y IV Sbjct: 211 GSALLFAMHGATILAV--------------SRYGGDREIYQIV 239 >dbj|BAA21083.1| (D50647) photosynthetic reaction center M subunit [Allochromatium vinosum] Length = 257 Score = 58.6 bits (139), Expect = 1e-07 Identities = 45/193 (23%), Positives = 89/193 (45%), Gaps = 21/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+ + G L I + ++FII F VD + I+ + + + P + Sbjct: 51 IYLAFTGTLSI--IFGFMAIFIIGFNMLASVDWNIIQ--------FVKHFFWLGLEPPAP 100 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 GL P+ E GG + + + + + R ++ + LGM ++ A+ Sbjct: 101 KYGLTIPPLSE----------GGWWLMAGFFLTMSILLWWVRTYKRAEALGMSQHLSWAF 150 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 +A + ++ I P+ GS+++ +P GI ++ F + N+ +PFHML +A ++ Sbjct: 151 AAAIFFYLSLGFIRPVMMGSWAEAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLY 210 Query: 207 GGSLFSAMHGSLV 219 G +L AMHG+ + Sbjct: 211 GSALLFAMHGATI 223 >gb|AAB41577.1| (U51298) photosynthetic reaction center M subunit [Rubrivivax gelatinosus] Length = 325 Score = 58.6 bits (139), Expect = 1e-07 Identities = 48/193 (24%), Positives = 85/193 (43%), Gaps = 21/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+G G+L I + + + II F V + I + A+ P S Sbjct: 52 IYLGALGILSI--VFGSLATMIIGFNMLASVGWNPIE--------FFRQFFWLALEPPSP 101 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 GL P L +GG + + L + + + R + + LGM +A A+ Sbjct: 102 KYGLKLPP----------LNDGGWWLMAGLFLTISILLWWVRMYTRARALGMGTHVAWAF 151 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 +A + + I P+ GS+S+ +P GI ++ F + N+ +PFH L +A ++ Sbjct: 152 AAAIWLYLVLGFIRPVLMGSWSEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHALSIAFLY 211 Query: 207 GGSLFSAMHGSLV 219 G +L AMHG+ + Sbjct: 212 GATLLFAMHGATI 224 >gb|AAD41904.1|AF159440_2 (AF159440) photosynthetic reaction center M subunit [Rhodoplanes elegans] Length = 245 Score = 58.2 bits (138), Expect = 2e-07 Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 21/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+GW G+ + + FIA + ++ + + + A+ P Sbjct: 52 IYLGWLGIFSL----------LCGFIAFEIIGLNMFASVNWDPIQFVRQLPWLALEPPPP 101 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 A GL P+ + D W G + L + + R ++ + LGM +A A+ Sbjct: 102 AYGLKIPPLND----DGWWLMAGFF------LTLSILLWWVRVYQRARVLGMGTHLAWAF 151 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 ++ + ++ PI GS+++ +P GI ++ F + N+ +PFHML +A ++ Sbjct: 152 ASAIFLYLSLGFFRPILMGSWAEAVPFGIFPHLDWTAAFSIRYGNLFYNPFHMLSIAFLY 211 Query: 207 GGSLFSAMHGSLV 219 G ++ AMHG+ + Sbjct: 212 GSAVLFAMHGATI 224 >dbj|BAA26098.1| (AB013379) L subunit of photosynthetic reaction center [Acidiphilium acidophilum] Length = 278 Score = 57.8 bits (137), Expect = 2e-07 Identities = 54/219 (24%), Positives = 95/219 (42%), Gaps = 34/219 (15%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV+ L T++ I P +I I I P + + Sbjct: 31 YVGFFGVVGGFFTLLGTALIIWGAAIGPTWNIWEIN-----------------IAPPNLS 73 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL F P L +GG +++I + + + RE E+S +LG+ + A+S Sbjct: 74 YGLAFAP----------LAHGGLWQIITICAVGSFGSWALREVEISRKLGIGLHVPAAFS 123 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFG 207 + A ++ +I P+ G++ G P GI ++ + N +P HM+ V F Sbjct: 124 VAIFAYVSLEVIRPLLMGAWGVGFPYGIMSHLDWASNTGYNYINFEYNPMHMVAVTLFFT 183 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 + A+HGSLV ++ N + E +F + E+T+ Sbjct: 184 TTFALALHGSLVLGAV------NPAKGETAKFTEHEDTF 216 >dbj|BAA25791.1| (AB010981) photosynthetic reaction center L subunit [Erythrobacter litoralis] Length = 245 Score = 57.8 bits (137), Expect = 2e-07 Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 40/222 (18%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVD---IDGIREPVSGSLLYGNNIISGAIIPT 85 Y+G+FGV + L T++ A I P ++ ID I P Sbjct: 2 YVGFFGVTTAISALLGTALIFAAAIEGPTLNPWLID--------------------IQPP 41 Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145 GL P+ E GG +++I ++ ++ R+ E+S +LGM + V Sbjct: 42 PIEAGLALAPLSE----------GGYWQIITACAVVAFYSWVFRQAEISRKLGMGYHVPV 91 Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAG 204 A+S V A + +I P+ G++ P GI +++ + N +P HML + Sbjct: 92 AFSFAVFAYVTLNVIRPVWMGAWGHAFPYGIWSHLDWVSNTGYMYVNFHYNPVHMLAITF 151 Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 F L A+HG LV S++ N S + + E+TY Sbjct: 152 FFTNCLALALHGGLVLSAV------NPSNGTNVKTPEYEDTY 187 >gb|AAB67247.1| (AF018955) reaction center M subunit [Ectothiorhodospira shaposhnikovii] Length = 324 Score = 57.8 bits (137), Expect = 2e-07 Identities = 52/194 (26%), Positives = 86/194 (43%), Gaps = 23/194 (11%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+GW G+ I L ++ II F V+ D I+ + + + P A Sbjct: 50 IYLGWTGLASI--LFGLMAILIIGFNFLAQVNWDVIQ--------FFRQLFWLGLEPPQA 99 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYM-GREWELSFRLGMRPWIAVA 146 GL P+ EA WL G + L L V Y R W + +A A Sbjct: 100 QYGLGIPPLAEAGW---WLMAG--FFLTTSILLWWVRMYRRARAWNMGTH------VAWA 148 Query: 147 YSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGV 205 ++A + ++ PI G +S+ +P GI ++ F ++ N+ +PFHML +A + Sbjct: 149 FAAAIFLYLSLGFFRPILMGDWSEAVPFGIFPHLDWTTAFSLKYGNLYYNPFHMLCIAFL 208 Query: 206 FGGSLFSAMHGSLV 219 +G ++ AMHG+ V Sbjct: 209 YGSAVLFAMHGATV 222 >gb|AAB67246.1| (AF018955) reaction center L subunit [Ectothiorhodospira shaposhnikovii] Length = 274 Score = 57.8 bits (137), Expect = 2e-07 Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 36/220 (16%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGVL L T + + P +I I +I P + Sbjct: 31 YVGFFGVLTAFFALLGTLLIVWGAAMGPTWNIWQI-----------------SINPPDLS 73 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL F P+ E GG +++I + L + R+ E++ +LGM + +A+S Sbjct: 74 YGLGFAPLTE----------GGLWQMITICALGAFVSWALRQAEIARKLGMGLHLPIAFS 123 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206 V A + +I P+ G++ G P GI +++ +Q H +P HML +A F Sbjct: 124 VAVFAYFTLVVIRPVLLGAWGHGFPYGIMSHLDWVSNTGYQFLH-FHYNPAHMLAIAFFF 182 Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 +L ++HG L+ S+ N E + + E+T+ Sbjct: 183 TTALALSLHGGLILSA------TNPKKGEPVKTPEYEDTF 216 >sp|P11847|RCEM_RHOCA REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTHETIC REACTION CENTER M SUBUNIT) pir||A28771 reaction center protein chain M - Rhodobacter capsulatus emb|CAA77555.1| (Z11165) 307 aa (34.5 kD) reaction center M protein [Rhodobacter capsulatus] gb|AAA26175.1| (K01184) reaction center protein M subunit [Rhodobacter capsulatus] Length = 307 Score = 57.0 bits (135), Expect = 4e-07 Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 28/224 (12%) Query: 30 IGWFGVLMI-PTLLTATSVFIIAFIAAPPVDIDGIREPVSG--SLLYGNNIISGAIIPTS 86 +GW G I P L +AF AA I +G ++ ++ ++ P Sbjct: 39 LGWMGNAQIGPIYLGIAGTVSLAFGAAWFFTIGVWYWYQAGFDPFIFMRDLFFFSLEPPP 98 Query: 87 AAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVA 146 A GL P L GG +++ L + V + R + + +LGM +A A Sbjct: 99 AEYGLAIAP----------LKQGGVWQIASLFMAISVIAWWVRVYTRADQLGMGKHMAWA 148 Query: 147 YSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGV 205 + + + + + PI GS+S P GI ++ F +H N+ +PFH L +A + Sbjct: 149 FLSAIWLWSVLGFWRPILMGSWSVAPPYGIFSHLDWTNQFSLDHGNLFYNPFHGLSIAAL 208 Query: 206 FGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIV 249 +G +L AMHG+ + + RFG E E IV Sbjct: 209 YGSALLFAMHGATILAVT--------------RFGGERELEQIV 238 >dbj|BAA77030.1| (AB026182) photosynthetic reaction center M subunit [Sphingomonas sp. NT12] Length = 251 Score = 56.6 bits (134), Expect = 5e-07 Identities = 43/193 (22%), Positives = 83/193 (42%), Gaps = 20/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+GW G L + + FIA + ++ + + + + ++ P + Sbjct: 51 IYLGWLGTLSL----------LFGFIAFEIIGLNMLASVGWNPIQFVRQLFWLSLEPPAP 100 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 G A V L GG + + F V + R + + LGM ++ A+ Sbjct: 101 KYGFR-------AMVP--LAEGGWFIMTGFFFSASVLLWWARTYRRALALGMGTHVSWAF 151 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 + + + I P+ GS+S+ +P GI ++ F + N+ +PFH L +A ++ Sbjct: 152 LSAIWLMLVLGFIRPMLMGSWSEAVPYGIFPHLDWTAAFSIRYGNLFYNPFHALSIAFLY 211 Query: 207 GGSLFSAMHGSLV 219 G +L AMHG+ + Sbjct: 212 GSTLLFAMHGATI 224 >dbj|BAA22797.1| (D50654) photosynthetic reaction center L subunit [Phaeospirillum molischianum] Length = 274 Score = 56.6 bits (134), Expect = 5e-07 Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 42/223 (18%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAP---PVDIDGIREPVSGSLLYGNNIISGAIIPT 85 Y+G+FGV + L ++ ++A P P +I +I P Sbjct: 31 YVGFFGVTTVFFTLLGVALIVLAASHGPTWNPWEI--------------------SIAPP 70 Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145 + GL F P+ E GG ++ I + + R+ E++ +LGM + Sbjct: 71 DLSYGLGFAPLNE----------GGFWQFITICATGAFVSWALRQVEIARKLGMGLHVPF 120 Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVA 203 A+S + A + +I P+ G++ G P GI +++ + +Q H +P HM+ ++ Sbjct: 121 AFSFAILAYVTLVVIRPVLMGAWGYGFPYGIFSHLDWVSNVGYQFLH-FHYNPAHMIAIS 179 Query: 204 GVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 F +L AMHG L+ S+ N E + + E+T+ Sbjct: 180 FFFTNALALAMHGGLILSA------SNPGKGEVVKAAEHEDTF 216 >pir||S68239 photosynthetic reaction center chain L, terbutryn-resistant - Rubrivivax gelatinosus gb|AAA73927.1| (U30310) reaction center L subunit [Rubrivivax gelatinosus] gb|AAB41576.1| (U51298) photosynthetic reaction center L subunit [Rubrivivax gelatinosus] prf||2123297A pufL gene [Rubrivivax gelatinosus] Length = 279 Score = 56.6 bits (134), Expect = 5e-07 Identities = 52/220 (23%), Positives = 93/220 (41%), Gaps = 36/220 (16%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV + + T++ I P ++ I +I P Sbjct: 31 YVGFFGVTTLFFSVLGTALIIWGASQGPTWNLWQI-----------------SIAPPDLK 73 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P+ E GG +++I + + + RE E+ +LGM+ + +A+S Sbjct: 74 YGLGVAPLME----------GGLWQIITVCAIGAFVSWALREVEICRKLGMQYHVPIAFS 123 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206 + A + +I PI G++ G P GI +++ + +Q H +P HML + F Sbjct: 124 FAILAYVTLVVIRPILMGAWGHGFPYGIFSHLDWVSNVGYQYLH-FHYNPAHMLAITFFF 182 Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 +L +MHG L+ S+ N E + E+T+ Sbjct: 183 TTTLAMSMHGGLILSA------ANPKKGEPMKTTDHEDTF 216 >sp|P51760|RCEL_RHOGE REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L SUBUNIT) pir||E49964 photosynthetic reaction center complex L subunit, PufL - Rhodocyclus gelatinosus pir||T50889 photosynthetic reaction center complex chain L [imported] - Rubrivivax gelatinosus dbj|BAA04100.1| (D16822) photosynthetic reaction center L subunit [Rubrivivax gelatinosus] dbj|BAA94042.1| (AB034704) L subunit of photosynthetic reaction center complex [Rubrivivax gelatinosus] Length = 279 Score = 56.6 bits (134), Expect = 5e-07 Identities = 52/220 (23%), Positives = 93/220 (41%), Gaps = 36/220 (16%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV + + T++ I P ++ I +I P Sbjct: 31 YVGFFGVTTLFFSVLGTALIIWGASQGPTWNLWQI-----------------SIAPPDLK 73 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P+ E GG +++I + + + RE E+ +LGM+ + +A+S Sbjct: 74 YGLGVAPLME----------GGLWQIITVCAIGAFVSWALREVEICRKLGMQYHVPIAFS 123 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206 + A + +I PI G++ G P GI +++ + +Q H +P HML + F Sbjct: 124 FAILAYVTLVVIRPILMGAWGHGFPYGIFSHLDWVSNVGYQYLH-FHYNPAHMLAITFFF 182 Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 +L +MHG L+ S+ N E + E+T+ Sbjct: 183 TTTLAMSMHGGLILSA------ANPKKGEPMKTTDHEDTF 216 >pdb|1EYS|L Chain L, Crystal Structure Of Photosynthetic Reaction Center From A Thermophilic Bacterium, Thermochromatium Tepidum Length = 280 Score = 55.8 bits (132), Expect = 8e-07 Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 28/220 (12%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV + T V +I + A G P S Y N+ +I P + Sbjct: 30 YVGFFGV--VGFCFTLLGVLLIVWGATI-----GPTGPTSDLQTY--NLWRISIAPPDLS 80 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P+ E GG +++I + + RE E+ +LG+ + A+S Sbjct: 81 YGLRMAPLTE----------GGLWQIITICAAGAFISWALREVEICRKLGIGFHVPFAFS 130 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206 + A + + P+ G++ G P GI +++ + +Q H +P HML ++ F Sbjct: 131 FAIGAYLVLVFVRPLLMGAWGHGFPYGILSHLDWVSNVGYQFLH-FHYNPAHMLAISFFF 189 Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 L +MHGSL+ S N E + + E T+ Sbjct: 190 TNCLALSMHGSLILS------VTNPQRGEPVKTSEHENTF 223 >dbj|BAA33002.1| (AB015977) photosynthetic reaction center M subunit [Rhodopseudomonas palustris] Length = 243 Score = 55.8 bits (132), Expect = 8e-07 Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 21/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+G GV + + A ++ II VD + I + N A+ P A Sbjct: 50 IYLGVTGV--VSAIFFAFAMLIIGLNMLAQVDWNVIA--------FIKNFCWLALEPPKA 99 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 GL F P+ E WL G + + R + S LGM ++ A+ Sbjct: 100 EYGLSFPPLAEGGW---WLTTG-------FFLTASILLWWVRTYRRSRALGMGTHVSWAF 149 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMH-PFHMLGVAGVF 206 ++ + A+ I P+ G++S+ P GI ++ F ++ L + PFH L +A ++ Sbjct: 150 ASAIFLYLALGFIQPVMMGTWSEAPPFGIFPHLDWTNNFSIKYGSLYYNPFHCLSIAFLY 209 Query: 207 GGSLFSAMHGSLV 219 G +L AMHG+ + Sbjct: 210 GSALLFAMHGATI 222 >dbj|BAA32993.1| (AB015707) photosynthetic reaction center L subunit [Erythrobacter sp.] Length = 245 Score = 55.8 bits (132), Expect = 8e-07 Identities = 52/193 (26%), Positives = 84/193 (42%), Gaps = 38/193 (19%) Query: 80 GAIIPTSAAIG--LHFYPIWEAASVDEWLYN-----------------GGPYELIVLHFL 120 G SAA+G L F E +++ WL + GG ++ I + L Sbjct: 2 GVTTAISAALGTMLIFAAALEGPTMNPWLIDIQPPAIEEGLSIMPLKEGGYWQWITVCAL 61 Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVF------LIYPIGQGSFSDGMPL 174 + + ++ R+ E+S +LGM Y P+A ATAVF +I P+ G++ P Sbjct: 62 IAFSSWVMRQAEISRKLGM------TYHVPIAFATAVFAYFTLQVIRPVWMGAWGHAFPY 115 Query: 175 GISGTFNFM-IVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESA 233 GI +++ N +P HML + F L A+HG LV S++ N S Sbjct: 116 GIWTHLDWVSYTGYLYGNFHFNPIHMLAITFFFTNCLALALHGGLVLSAV------NPSG 169 Query: 234 NEGYRFGQEEETY 246 + + + E+TY Sbjct: 170 DTEVKTPEYEDTY 182 >dbj|BAA22649.1| (D50653) photosynthetic reaction center L subunit [Thiocystis gelatinosa] Length = 257 Score = 55.4 bits (131), Expect = 1e-06 Identities = 54/220 (24%), Positives = 89/220 (39%), Gaps = 31/220 (14%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G FGV L T + + P ++ NI +I P + Sbjct: 10 YVGLFGVSEFFFALLGTLLIVWGATLGPNAELQTF------------NIWQISIAPPDLS 57 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P+ E GG +++I + + R+ E+S +LG+ + A+S Sbjct: 58 YGLGMAPMTE----------GGLWQIITFCAIGAFVSWALRQVEISRKLGIGFHVPFAFS 107 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206 + A + +I PI G++ G P GI +++ + +Q H +P HML + F Sbjct: 108 FAIGAYITLVVIRPILLGAWGHGFPYGIMSHLDWVSNVGYQFLH-FHYNPAHMLAITFFF 166 Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 +L AMHGSL S N E + + E T+ Sbjct: 167 TNALALAMHGSLNLS------VTNPQEGEPVKTSEHENTF 200 >dbj|BAA22645.1| (D50651) photosynthetic reaction center L subunit [Rhodocyclus tenuis] Length = 253 Score = 55.4 bits (131), Expect = 1e-06 Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 28/195 (14%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FG+ + L T + ++ P ++ I +I P Sbjct: 10 YVGFFGITAVMCALMGTLLIVLGASWGPTWNLWQI-----------------SIAPPDLK 52 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P+ E GG ++ I + + + RE E+ +LG+ +I A+S Sbjct: 53 YGLGVAPLRE----------GGLWQAITVCAIGVFVSWALREVEICRKLGIGFYIPFAFS 102 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFG 207 + A + +I P+ G++ G P GI +++ ++ + +P HMLG+A F Sbjct: 103 FAILAYITLVVIRPVLMGAWGHGFPYGIMSHLDWVSNTGYQYLHFHYNPGHMLGIAFFFT 162 Query: 208 GSLFSAMHGSLVTSS 222 +L A+HGSL+ S+ Sbjct: 163 TTLALALHGSLILSA 177 >dbj|BAA76948.1| (AB020784) pufM [Rhodovulum sulfidophilum] Length = 321 Score = 55.0 bits (130), Expect = 1e-06 Identities = 39/140 (27%), Positives = 63/140 (44%), Gaps = 11/140 (7%) Query: 81 AIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMR 140 A+ P S GL P+ E GG Y + L+ V + R + L+ M Sbjct: 94 ALEPPSPEYGLRIPPLKE----------GGWYMVASFFLLISVWAWWARTYMLAVEHKMG 143 Query: 141 PWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHM 199 IA A+ + + + PI GS+S+ +P GI ++ F + N+ +PFH Sbjct: 144 KHIAWAFLSAIWLFMVLGFFRPILMGSWSEMVPYGIFPHLDWTTAFSIRYGNLYYNPFHA 203 Query: 200 LGVAGVFGGSLFSAMHGSLV 219 L +A ++G +L AMHG + Sbjct: 204 LSIAFLYGSALLFAMHGGTI 223 >gb|AAD41903.1|AF159440_1 (AF159440) photosynthetic reaction center L subunit [Rhodoplanes elegans] Length = 235 Score = 54.7 bits (129), Expect = 2e-06 Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 13/149 (8%) Query: 76 NIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSF 135 NI I P + GL P+ E GG +++I + L + R+ E++ Sbjct: 22 NIWQINIAPPDLSYGLTLAPLKE----------GGLWQIITVCALGAFCSWALRQAEIAR 71 Query: 136 RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNIL 193 +LGM I VA+ + A A+ +I P+ G++ G P GI +++ + +Q H Sbjct: 72 KLGMGLHIPVAFGFAIFAYVALVVIRPLLMGAWGHGFPYGIMSHLDWVSNVGYQNLH-FH 130 Query: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSS 222 +P H + + F +L AMHGSL+ S+ Sbjct: 131 YNPAHCIAITFFFTNALALAMHGSLIVSA 159 >pdb|1DS8|M Chain M, Photosynthetic Reaction Center From Rhodobacter Sphaeroides In The Charge-Neutral Dqaqb State With The Proton Transfer Inhibitor Cd2+ pdb|1DS8|S Chain S, Photosynthetic Reaction Center From Rhodobacter Sphaeroides In The Charge-Neutral Dqaqb State With The Proton Transfer Inhibitor Cd2+ pdb|1DV6|M Chain M, Photosynthetic Reaction Center From Rhodobacter Sphaeroides In The Charge-Neutral Dqaqb State With The Proton Transfer Inhibitor Zn2+ pdb|1DV6|S Chain S, Photosynthetic Reaction Center From Rhodobacter Sphaeroides In The Charge-Neutral Dqaqb State With The Proton Transfer Inhibitor Zn2+ pdb|1DV3|M Chain M, Photosynthetic Reaction Center From Rhodobacter Sphaeroides In The Charge-Separated D+qaqb- State With The Proton Transfer Inhibitor Cd2+ pdb|1DV3|S Chain S, Photosynthetic Reaction Center From Rhodobacter Sphaeroides In The Charge-Separated D+qaqb- State With The Proton Transfer Inhibitor Cd2+ Length = 307 Score = 54.3 bits (128), Expect = 2e-06 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + LGM A A+ + + + I PI Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 223 >pdb|1QOV|M Chain M, Photosynthetic Reaction Center Mutant With Ala M260 Replaced With Trp (Chain M, A260w) Length = 307 Score = 54.3 bits (128), Expect = 2e-06 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + LGM A A+ + + + I PI Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 223 >pir||T50761 reaction center protein chain M [imported] - Rhodobacter sphaeroides gb|AAF24305.1| (AF195122) PufM [Rhodobacter sphaeroides] Length = 308 Score = 54.3 bits (128), Expect = 2e-06 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + LGM A A+ + + + I PI Sbjct: 110 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 169 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 170 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 224 >pdb|1AIJ|S Chain S, Photosynthetic Reaction Center From Rhodobacter Sphaeroides In The Charge-Neutral Dqaqb State Length = 301 Score = 54.3 bits (128), Expect = 2e-06 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + LGM A A+ + + + I PI Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 223 >dbj|BAA09314.1| (D50647) photosynthetic reaction center L subunit [Allochromatium vinosum] Length = 257 Score = 54.3 bits (128), Expect = 2e-06 Identities = 52/219 (23%), Positives = 87/219 (38%), Gaps = 29/219 (13%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV L + + P ++ NI +I P + Sbjct: 10 YVGFFGVAGFFFALLVVLLIVWGATIGPNAELQTY------------NIWQISIAPPDLS 57 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P+ E GG +++I + + + RE E+ +LG+ I A++ Sbjct: 58 YGLGMAPMTE----------GGLWQIITICAIGAFVSWALREVEICRKLGIGFHIPFAFA 107 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207 P+ A + ++ PI G++ G P GI +++ V N +P HML + F Sbjct: 108 FPIGAYLVLVVVRPILMGAWGHGFPYGILSHLDWVSNVGYQFLNFHYNPAHMLAITFFFT 167 Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 L +MHGSL S N E + + E T+ Sbjct: 168 NCLALSMHGSLNLS------VTNPQKGEEVKTSEHENTF 200 >pdb|1PSS|M Chain M, Photosynthetic Reaction Center (Wild-Type) Length = 296 Score = 54.3 bits (128), Expect = 2e-06 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + LGM A A+ + + + I PI Sbjct: 104 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 163 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 164 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 218 >pdb|2RCR|M Chain M, Photosynthetic Reaction Center From (Rhodobacter sphaeroides) pdb|1PCR|M Chain M, Photosynthetic Reaction Center pdb|1AIJ|M Chain M, Photosynthetic Reaction Center From Rhodobacter Sphaeroides In The Charge-Neutral Dqaqb State pdb|1AIG|M Chain M, Photosynthetic Reaction Center From Rhodobacter Sphaeroides In The D+qb- Charge Separated State pdb|1AIG|O Chain O, Photosynthetic Reaction Center From Rhodobacter Sphaeroides In The D+qb- Charge Separated State pdb|4RCR|M Chain M, Photosynthetic Reaction Center Length = 307 Score = 54.3 bits (128), Expect = 2e-06 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + LGM A A+ + + + I PI Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 223 >prf||1703253B photosyn reaction center M [Chloroflexus aurantiacus] Length = 307 Score = 54.3 bits (128), Expect = 2e-06 Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 13/140 (9%) Query: 82 IIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL-LGVACYMGREWELSFRLGMR 140 I P S+ GL F P+ N G + LI FL + + + + + LG++ Sbjct: 85 IDPPSSRYGLSFPPL-----------NEGGWWLIATFFLTVSIFAWYMHIYTRAKALGIK 133 Query: 141 PWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHM 199 P++A ++ +A +++I P+ G +S+ GI ++ + N +PFHM Sbjct: 134 PYLAYGFTGAIALYLVIYIIRPVWMGDWSEAPAHGIKALLDWTNNVSVRYGNFYYNPFHM 193 Query: 200 LGVAGVFGGSLFSAMHGSLV 219 L + + G + F AMH + Sbjct: 194 LSIFFLLGSTFFFAMHAGTI 213 >sp|P02953|RCEM_RHOSH REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTHETIC REACTION CENTER M SUBUNIT) pir||WNRFMS reaction center protein chain M - Rhodobacter sphaeroides gb|AAA26179.1| (K00827) reaction center subunit m [Rhodobacter sphaeroides] emb|CAB38755.1| (AJ010302) reaction centre M protein [Rhodobacter sphaeroides] prf||0911309A protein M,reaction center [Rhodobacter sphaeroides] Length = 308 Score = 54.3 bits (128), Expect = 2e-06 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + LGM A A+ + + + I PI Sbjct: 110 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 169 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 170 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 224 >pdb|1E6D|M Chain M, Photosynthetic Reaction Center Mutant With Trp M115 Replaced With Phe (Chain M, Wm115f) Phe M197 Replaced With Arg (Chain M, Fm197r) Length = 307 Score = 53.9 bits (127), Expect = 3e-06 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + LGM A A+ + + + I PI Sbjct: 109 LKEGGLFLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLRYNPFHGLSIAFLYGSALLFAMHGATI 223 >pdb|1MPS|M Chain M, Photosynthetic Reaction Center Mutant With Phe M 197 Replaced With Arg And Tyr M 177 Replaced With Phe (Chain M, Y177f, F197r) Length = 307 Score = 53.9 bits (127), Expect = 3e-06 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + LGM A A+ + + + I PI Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 169 GSWSEAVPFGIFSHLDWTNNFSLVHGNLRYNPFHGLSIAFLYGSALLFAMHGATI 223 >sp|P51762|RCEL_CHRVI REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L SUBUNIT) dbj|BAA32740.1| (AB011811) L subunit of reaction center complex [Allochromatium vinosum] Length = 278 Score = 53.9 bits (127), Expect = 3e-06 Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 31/220 (14%) Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88 Y+G+FGV L + + P ++ NI +I P + Sbjct: 31 YVGFFGVAGFFFALLGVLLIVWGATIGPNAELQTY------------NIWQISIAPPDLS 78 Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148 GL P+ E GG +++I + + + RE E+ +LG+ I A++ Sbjct: 79 YGLGMAPMTE----------GGLWQIITICAIGAFVSWALREVEICRKLGIGFHIPFAFA 128 Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206 + A + ++ PI G++ G P GI +++ + +Q H +P HML + F Sbjct: 129 FAIGAYLVLVVVRPILMGAWGHGFPYGILSHLDWVSNVGYQFLH-FHYNPAHMLAITFFF 187 Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246 L +MHGSL+ S N E + + E T+ Sbjct: 188 TNCLALSMHGSLILS------VTNPQKGEEVKTSEHENTF 221 >dbj|BAA26099.1| (AB013379) M subunit of photosynthetic reaction center [Acidiphilium acidophilum] Length = 256 Score = 53.9 bits (127), Expect = 3e-06 Identities = 55/223 (24%), Positives = 94/223 (41%), Gaps = 35/223 (15%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+G GV I L+ A + + A+ V+ + IR + ++ A+ P + Sbjct: 51 IYLGTLGVASIICLVVAFEIIGLNMWAS--VNWNPIR--------FVRDLPWLALEPPAP 100 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 A GL P L +GG + L L + + R + S +LG+ A A+ Sbjct: 101 AYGLSLPP----------LQHGGWWLLAGLFLTSSLILWWARIYRRSRQLGIGTHTAWAF 150 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 ++ + + I P+ GS+ + P GI ++ + F + N+ PFHML + ++ Sbjct: 151 ASGIWLFLVLGFIRPLLMGSWGEAPPFGIFPHLDWTVSFSLRYGNLYYDPFHMLSIVFLY 210 Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIV 249 G L AMHG+ + + RFG E E IV Sbjct: 211 GSVLLFAMHGATILAV--------------SRFGGEREAEQIV 239 >dbj|BAA22648.1| (D50652) photosynthetic reaction center M subunit [Rhodomicrobium vannielii] Length = 257 Score = 53.9 bits (127), Expect = 3e-06 Identities = 41/179 (22%), Positives = 78/179 (42%), Gaps = 11/179 (6%) Query: 42 LTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAS 101 LT + I FIA + ++ + + A+ P + GL P+ + Sbjct: 55 LTGVASIIFGFIAIEIIGLNMAASVDWSPAQFVKQLPWLALEPPAPENGLKIPPLNQGGW 114 Query: 102 VDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIY 161 WL+ G V + R + + +LGM IA A+++ + ++ L Sbjct: 115 ---WLWAG-------FFMTASVLLWWARTYLRARKLGMGTHIAWAFASAIFLMLSLGLFR 164 Query: 162 PIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 P+ G++ + +P GI ++ F + N+ +PFHML +A ++G +L MHG+ + Sbjct: 165 PVLMGTWGEAVPFGIFPHLDWTTAFSIRYGNLYYNPFHMLSIAFLYGSALLFGMHGATI 223 >dbj|BAA22643.1| (D50650) photosynthetic reaction center L subunit [Rhodoferax fermentans] Length = 253 Score = 53.9 bits (127), Expect = 3e-06 Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 13/149 (8%) Query: 76 NIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSF 135 N+ +I P + GL P+ E GG ++L+ + + +M RE E+ Sbjct: 40 NLWQISIAPPDLSYGLGIAPLME----------GGLWQLVTVCAIGAFVSWMLREVEICR 89 Query: 136 RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNF--MIVFQAEHNIL 193 +LGM + +A+ + A + +I P+ G++ G P GI ++ + +Q H Sbjct: 90 KLGMGLHVPLAFGVAIFAYVTLVVIRPVLMGAWGHGFPYGIYSHLDWGSNVGYQYLH-FH 148 Query: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSS 222 +P HML ++ FG + ++H SL+ S+ Sbjct: 149 YNPAHMLAISFSFGTTFALSLHSSLIVSA 177 >emb|CAA30070.1| (X07018) psbD gene product (123 AA) [Synechocystis PCC6803] Length = 123 Score = 53.9 bits (127), Expect = 3e-06 Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 2/62 (3%) Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300 Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +++GI +A NL + Sbjct: 10 QAEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSSVGIVGLALNLRAY 67 Query: 301 NF 302 +F Sbjct: 68 DF 69 >pdb|1E14|M Chain M, Photosynthetic Reaction Center Mutant With Phe M197 Replaced With Arg (Chain M, Fm197r) And Gly M203 Replaced With Asp (Chain M, Gm203d) Length = 307 Score = 53.5 bits (126), Expect = 4e-06 Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + LGM A A+ + + + I PI Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLRYNPFHDLSIAFLYGSALLFAMHGATI 223 >dbj|BAA25790.1| (AB010830) photosynthetic reaction center M subunit [Rhodomicrobium vannielii] Length = 250 Score = 53.5 bits (126), Expect = 4e-06 Identities = 41/179 (22%), Positives = 78/179 (42%), Gaps = 11/179 (6%) Query: 42 LTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAS 101 LT + I FIA + ++ + + A+ P + GL P+ + Sbjct: 55 LTGVASIIFGFIAIEIIGLNMAASVDWSPAQFVKQLPWLALEPPAPENGLKIPPLNQGGW 114 Query: 102 VDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIY 161 WL+ G V + R + + +LGM IA A+++ + ++ L Sbjct: 115 ---WLWAG-------FFMTASVLLWWARTYLRARQLGMGTHIAWAFASAIFLMLSLGLFR 164 Query: 162 PIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 P+ G++ + +P GI ++ F + N+ +PFHML +A ++G +L MHG+ + Sbjct: 165 PVLMGTWGEAVPFGIFPHLDWTTAFSIRYGNLYYNPFHMLSIAFLYGSALLFGMHGATI 223 >dbj|BAA25552.1| (AB005218) M subunit of photosynthetic reaction center complex [Acidiphilium rubrum] dbj|BAA25559.1| (AB005219) M subunit of photosynthetic reaction center complex [Acidiphilium angustum] Length = 326 Score = 53.5 bits (126), Expect = 4e-06 Identities = 44/193 (22%), Positives = 86/193 (43%), Gaps = 21/193 (10%) Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87 +Y+G G+ I T + A + + +A+ V+ + IR + ++ A+ P + Sbjct: 51 IYLGTLGIASIATFVIAFEIIGLNMLAS--VNWNPIR--------FVRDLPWLALEPPAP 100 Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147 + GL P L +GG + + + + R + S +LG+ A A+ Sbjct: 101 SYGLRLPP----------LQHGGWWLMAGFFLTTSLILWWARIYRRSRQLGIGTHTAWAF 150 Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206 ++ + + I P+ GS+ + P GI ++ + F + N+ PFHML + ++ Sbjct: 151 ASAIWLYLVLGFIRPLLMGSWGEAPPFGIFPHLDWTVSFSLRYGNLYYDPFHMLSIVFLY 210 Query: 207 GGSLFSAMHGSLV 219 G L AMHG+ + Sbjct: 211 GSVLLFAMHGATI 223 >pdb|1YST|M Chain M, Photosynthetic Reaction Center (Wild Type) Length = 305 Score = 53.5 bits (126), Expect = 4e-06 Identities = 33/115 (28%), Positives = 57/115 (48%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + +GM A A+ + + + I PI Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQAMGMGKHTAWAFLSAIWLWMVLGFIRPILM 168 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 223 >pir||S24213 reaction center protein chain M - Rhodobacter sphaeroides emb|CAA45001.1| (X63405) polypeptide M of reaction centre [Rhodobacter sphaeroides] Length = 308 Score = 53.5 bits (126), Expect = 4e-06 Identities = 33/115 (28%), Positives = 57/115 (48%), Gaps = 1/115 (0%) Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165 L GG + + + V + GR + + +GM A A+ + + + I PI Sbjct: 110 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQAMGMGKHTAWAFLSAIWLWMVLGFIRPILM 169 Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219 GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ + Sbjct: 170 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 224 Database: nr Posted date: Mar 14, 2001 1:25 PM Number of letters in database: 201,912,487 Number of sequences in database: 640,428 Lambda K H 0.324 0.140 0.439 Gapped Lambda K H 0.270 0.0470 0.230 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 144866406 Number of Sequences: 640428 Number of extensions: 6251454 Number of successful extensions: 17910 Number of sequences better than 10.0: 334 Number of HSP's better than 10.0 without gapping: 277 Number of HSP's successfully gapped in prelim test: 57 Number of HSP's that attempted gapping in prelim test: 17378 Number of HSP's gapped (non-prelim): 340 length of query: 353 length of database: 201,912,487 effective HSP length: 50 effective length of query: 303 effective length of database: 169,891,087 effective search space: 51476999361 effective search space used: 51476999361 T: 11 A: 40 X1: 15 ( 7.0 bits) X2: 38 (14.8 bits) X3: 64 (24.9 bits) S1: 40 (21.6 bits) S2: 72 (32.5 bits) Lotus japonicus(Cp) |