BLAST2 result
BLASTP 2.1.2 [Oct-19-2000]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BAB33176.1 353 aa
(353 letters)
Database: nr
640,428 sequences; 201,912,487 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
sp|P06585|PSBA_PEA PHOTOSYSTEM Q(B) PROTEIN PRECURSOR (32 KD THY... 728 0.0
sp|P11848|PSBA_SINAL PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 726 0.0
sp|P18290|PSBA_BRANA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 725 0.0
sp|P02957|PSBA_SOYBN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 725 0.0
gi|7525013 PSII 32 KDa protein [Arabidopsis thaliana] >gi|250008... 725 0.0
gi|11465935 PSII 32kd protein [Nicotiana tabacum] >gi|11497504|r... 725 0.0
sp|P02956|PSBA_AMAHY PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 724 0.0
dbj|BAA76900.1| (AB025940) QB protein [Nicotiana tabacum] 723 0.0
sp|P36491|PSBA_POPDE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 723 0.0
emb|CAA30818.1| (X08017) psbA polypeptide (AA 1-353) [Nicotiana ... 723 0.0
sp|P04998|PSBA_MEDSA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 723 0.0
sp|Q33282|PSBA_VIGUN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 723 0.0
sp|P32036|PSBA_CUSRE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 723 0.0
sp|P04999|PSBA_PETHY PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 723 0.0
gb|AAD00106.1| (U63020) D1 protein [Magnolia pyramidata] 723 0.0
sp|P10510|PSBA_SECCE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 722 0.0
sp|P04848|PSBA_TOBAC PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 722 0.0
emb|CAA25252.1| (X00616) P32 protein [Nicotiana tabacum] 721 0.0
gi|11466764 PSII 32kDa protein [Oryza sativa] >gi|131251|sp|P120... 721 0.0
gb|AAA74185.1| (U25659) photosystem II protein D1 [Solanum nigrum] 721 0.0
sp|P05337|PSBA_HORVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 721 0.0
pir||F2NUD1 photosystem II protein D1 precursor - rye chloroplast 719 0.0
gi|11467171 PSII 32 KDa protein [Zea mays] >gi|1346840|sp|P48183... 718 0.0
dbj|BAA82767.1| (AB020584) psbA [Conocephalum conicum] 715 0.0
sp|P27201|PSBA_SPIOG PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 715 0.0
dbj|BAA82757.1| (AB020574) psbA [Conocephalum conicum] >gi|56889... 714 0.0
gi|11466695 psbA [Marchantia polymorpha] >gi|131249|sp|P06402|PS... 713 0.0
dbj|BAA82776.2| (AB020605) psbA [Conocephalum conicum] 713 0.0
dbj|BAA82764.1| (AB020581) psbA [Conocephalum conicum] >gi|56890... 712 0.0
dbj|BAA82760.1| (AB020577) psbA [Conocephalum conicum] 712 0.0
dbj|BAA82779.1| (AB020619) similar to SWISS-PROT:p06402 [Conocep... 712 0.0
dbj|BAA82770.1| (AB020587) psbA [Conocephalum conicum] >gi|58115... 711 0.0
dbj|BAA82782.1| (AB020622) similar to SWISS-PROT:p06402 [Dumorti... 711 0.0
sp|P13910|PSBA_VICFA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 711 0.0
emb|CAA04456.1| (AJ001003) 32 kD PSII D1 protein [Picea abies] 710 0.0
sp|P50155|PSBA_PICAB PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 708 0.0
gi|7524753 PSII 32kDa protein [Pinus thunbergii] >gi|131254|sp|P... 708 0.0
dbj|BAA82781.1| (AB020621) similar to SWISS-PROT:p06402 [Conocep... 705 0.0
gb|AAK11251.1|AF329007_1 (AF329007) PSII D1 protein [Prunus x ye... 703 0.0
gb|AAG60680.1|AF315340_1 (AF315340) PSII D1 protein [Prunus sarg... 702 0.0
gb|AAG60679.1|AF315339_1 (AF315339) PSII D1 protein [Prunus x ye... 702 0.0
gb|AAG60681.1|AF315341_1 (AF315341) PSII D1 protein [Prunus serr... 700 0.0
gi|7524765 photosystem II D1 protein [Chlorella vulgaris] >gi|30... 700 0.0
gb|AAK11250.1|AF329006_1 (AF329006) PSII D1 protein [Prunus x ye... 699 0.0
gb|AAK11253.1|AF329009_1 (AF329009) PSII D1 protein [Prunus x ye... 698 0.0
gb|AAG60670.1|AF314009_1 (AF314009) PSII D1 protein [Prunus x ye... 698 0.0
gb|AAK11252.1|AF329008_1 (AF329008) PSII D1 protein [Prunus x ye... 697 0.0
gb|AAG60671.1|AF314010_1 (AF314010) PSII D1 protein [Prunus x ye... 697 0.0
gb|AAK11254.1|AF329010_1 (AF329010) PSII D1 protein [Prunus x ye... 696 0.0
sp|P35860|PSBA_CHLEL PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 695 0.0
sp|P09752|PSBA_CHLMO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 693 0.0
gi|11467759 D1 reaction-center protein of photosystem II [Nephro... 693 0.0
gb|AAG60682.1|AF315342_1 (AF315342) PSII D1 protein [Prunus subh... 689 0.0
gi|11466347 D1 reaction center protein of photosystem II [Mesost... 689 0.0
sp|P07753|PSBA_CHLRE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 688 0.0
gb|AAC99848.1| (U28165) photosystem II core 32 kDa protein [Palm... 669 0.0
gi|11465678 Photosystem II Q(b) protein (D1) [Porphyra purpurea]... 667 0.0
gi|11467381 D1 protein of the photosystem II reaction center cor... 665 0.0
sp|P04997|PSB2_SYNP7 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 665 0.0
sp|Q32389|PSBA_HETCA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 664 0.0
sp|P15191|PSBA_PROHO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 663 0.0
sp|P31694|PSB2_ANASP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 663 0.0
pir||F2KTD1 photosystem II protein D1 precursor - Cyanophora par... 663 0.0
gi|11467479 PSII, D1 reaction-center protein [Odontella sinensis... 663 0.0
sp|P24625|PSBA_ANTSP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 660 0.0
sp|P29270|PSBA_ANAAZ PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 659 0.0
sp|P35876|PSB1_SYNEN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 659 0.0
gb|AAF37850.1|AF227740_1 (AF227740) photosystem II subunit core ... 659 0.0
sp|P46242|PSB1_ANASP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 659 0.0
pir||S26586 photosystem II protein D1 precursor - Synechococcus ... 658 0.0
sp|P07063|PSBA_FREDI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 656 0.0
gi|11467647 PSII D1 reaction-center protein [Guillardia theta] >... 655 0.0
gi|11465541 unknown; Photosystem II Q(b) protein (D1) [Cyanidium... 655 0.0
sp|P48265|PSBA_BUMFI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 655 0.0
sp|P51765|PSB1_SYNVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 654 0.0
sp|P04996|PSB1_SYNP7 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 653 0.0
sp|P16033|PSB2_SYNY3 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 652 0.0
sp|P51764|PSB2_MICAE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 651 0.0
gb|AAA84445.1| (K01200) psbA gene product [Amaranthus hybridus] ... 648 0.0
sp|P51759|PSBA_CYAA5 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 647 0.0
sp|P14660|PSBA_SYNY4 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 647 0.0
gb|AAD40182.1|AF156980_1 (AF156980) photosystem II D1 protein [S... 646 0.0
sp|P24725|PSBA_CYACA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 646 0.0
sp|P24726|PSBA_ECTSI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 645 0.0
sp|P35877|PSB2_SYNEN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 642 0.0
gi|11466988 PSII D1-polypeptide [Euglena gracilis] >gi|464479|sp... 641 0.0
emb|CAA25447.1| (X00929) 32-Kda thylakoid membrane protein [Eugl... 640 0.0
gb|AAD51002.1|AF170924_1 (AF170924) photosystem II D1 protein [M... 636 0.0
sp|P07826|PSB1_SYNY3 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 612 e-174
gb|AAD34735.1| (AF131887) photosystem Q (B) protein precursor [P... 610 e-174
gb|AAD34734.1| (AF131886) mutant photosystem Q (B) protein precu... 610 e-173
emb|CAA68778.1| (Y00885) D1 protein (AA 1-360) [Synechocystis PC... 604 e-172
gb|AAB61275.1| (U96631) D1 protein, photosystem II [Acorus grami... 601 e-171
sp|P46895|PSBA_PROMA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 600 e-171
dbj|BAA86296.1| (AB027234) photosystem II core 32 kDa protein [G... 590 e-167
gb|AAD44700.1| (AF130033) PSII D1 reaction center protein [Heter... 571 e-162
gb|AAF89983.1|AF206709_1 (AF206709) PSII D1 reaction center prot... 570 e-161
gb|AAF89981.1|AF206707_1 (AF206707) PSII D1 reaction center prot... 570 e-161
gb|AAB61274.1| (U96630) D1 protein, photosystem II [Phoenix dact... 566 e-160
gb|AAF89980.1|AF206706_2 (AF206706) PSII D1 reaction center prot... 563 e-159
dbj|BAA83815.1| (AB025588) psbA [Gonyaulax polyedra] 563 e-159
dbj|BAA83813.1| (AB025586) psbA [Amphidinium carterae] 557 e-157
gb|AAF31417.1|AF206672_1 (AF206672) photosystem II protein D1 [A... 556 e-157
dbj|BAA83816.2| (AB025589) psbA [Alexandrium tamarense] 551 e-156
dbj|BAA83812.1| (AB025585) psbA [Prorocentrum micans] 540 e-152
gb|AAB61276.1| (U96632) D1 protein, photosystem II [Ludisia disc... 527 e-149
dbj|BAA83817.2| (AB025590) psbA [Alexandrium catenella] 520 e-147
gb|AAF89986.1|AF206712_1 (AF206712) PSII D1 reaction center prot... 468 e-131
gb|AAF89984.1|AF206710_1 (AF206710) PSII D1 reaction center prot... 446 e-124
gb|AAD49557.1| (AF107784) PsbA [Trichodesmium sp. IMS101] 433 e-120
pir||S24992 photosystem II protein D1 - common sunflower chlorop... 379 e-104
emb|CAA10627.1| (AJ132264) PSII D1 reaction-centre protein [Skel... 375 e-103
pir||S48682 D1 protein - Spinach 375 e-103
gb|AAA84549.1| (M16899) 32 kDa membrane protein [Pisum sativum] 325 6e-88
sp|Q01366|PSBA_PHAVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 280 2e-74
gb|AAF89985.1|AF206711_1 (AF206711) PSII D1 reaction center prot... 266 3e-70
dbj|BAA96363.1| (AB043963) photosystem II Qb protein [Bruguiera ... 262 6e-69
gb|AAF08827.1| (AF193066) photosystem II Q(B) protein [Bassia sc... 236 2e-61
pir||C31183 photosystem II protein D1 - barley chloroplast (frag... 226 3e-58
gb|AAC16320.1| (AF061287) D1 protein [Senecio vulgaris] 195 8e-49
emb|CAA73828.1| (Y13398) D1 protein [Porphyra linearis] 186 3e-46
emb|CAA75354.1| (Y15074) D1 protein [Haslea ostrearia] 181 1e-44
prf||1006312A protein QB [Solanum nigrum] 178 7e-44
sp|P09192|PSBD_SYNY3 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 174 2e-42
sp|P51766|PSBD_PROHO PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 173 3e-42
pir||S42646 photosystem II protein D2 - Anabaena sp. (strain PCC... 173 3e-42
gi|11467543 PSII, D2 reaction-center protein [Odontella sinensis... 171 1e-41
emb|CAA75405.1| (Y15137) D1 protein [Skeletonema costatum] 170 2e-41
sp|P20898|PSBD_SYNP2 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 170 2e-41
sp|P11005|PSBD_SYNP7 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 170 3e-41
gi|11467390 D2 protein of the photosystem II reaction center cor... 169 5e-41
sp|P28253|PSBD_CYACA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 169 6e-41
gi|11466345 D2 reaction center protein of photosystem II [Mesost... 167 2e-40
gi|11467794 D2 reaction-center protein of photosystem II [Nephro... 167 2e-40
gi|11465589 unknown; Photosystem II D2 protein [Cyanidium caldar... 166 4e-40
gi|7524716 PSII D2 protein [Pinus thunbergii] >gi|1172677|sp|P41... 166 4e-40
gb|AAG26177.1| (AF123821) photosystem II D2 protein [Ginkgo biloba] 165 9e-40
gi|11465823 Photosystem II D2 protein [Porphyra purpurea] >gi|17... 164 2e-39
pir||F2PMD2 photosystem II protein D2 - garden pea chloroplast 164 2e-39
gi|11466698 psbD [Marchantia polymorpha] >gi|131293|sp|P06404|PS... 164 2e-39
gb|AAG44374.1| (AF235043) photosystem II D2 protein [Amborella t... 164 2e-39
gb|AAG26171.1| (AF123818) photosystem II D2 protein [Cercidiphyl... 164 2e-39
gb|AAG26169.1| (AF123817) photosystem II D2 protein [Ceratophyll... 164 2e-39
gi|7524799 photosystem II D2 protein [Chlorella vulgaris] >gi|30... 164 2e-39
gb|AAG26182.1| (AF123823) photosystem II D2 protein [Illicium pa... 163 3e-39
emb|CAA58959.1| (X84154) D2 protein, photosystem II subunit [Ant... 163 3e-39
gi|11465949 PSII D2 protein [Nicotiana tabacum] >gi|131301|sp|P0... 163 3e-39
gb|AAG26167.1| (AF123816) photosystem II D2 protein [Calycanthus... 163 3e-39
sp|P06006|PSBD_PEA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) P... 163 3e-39
prf||1209190A photosystem II protein D2 [Chlamydomonas reinhardtii] 163 3e-39
sp|P06007|PSBD_CHLRE PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 163 3e-39
gb|AAG26186.1| (AF123825) photosystem II D2 protein [Liriodendro... 162 5e-39
gb|AAG26180.1| (AF123822) photosystem II D2 protein [Gnetum gnemon] 162 5e-39
gb|AAG26163.1| (AF123814) photosystem II D2 protein [Asarum cana... 162 6e-39
gb|AAG26161.1| (AF123813) photosystem II D2 protein [Acorus cala... 162 6e-39
gb|AAF82675.1| (AF188854) photosystem II D2 protein [Nymphaea od... 162 6e-39
gi|11467626 PSII D2 reaction-center protein [Guillardia theta] >... 162 6e-39
dbj|BAA83458.1| (AB013682) photosystem II protein D2 [Adiantum c... 162 8e-39
gb|AAD24582.1|AF134324_1 (AF134324) Qa-binding protein PsbD [Pop... 162 8e-39
gi|11497520 PSII D2 protein [Spinacia oleracea] >gi|131297|sp|P0... 162 8e-39
gb|AAG26165.1| (AF123815) photosystem II D2 protein [Cabomba car... 161 1e-38
sp|P11849|PSBD_HORVU PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 161 1e-38
sp|P10803|PSBD_SECCE PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A)... 161 1e-38
gi|7525028 PSII D2 protein [Arabidopsis thaliana] >gi|6685787|sp... 161 1e-38
pir||S00929 photosystem II protein D2 - barley chloroplast >gi|1... 161 2e-38
gi|11466770 PSII D2 protein [Oryza sativa] >gi|131294|sp|P12095|... 161 2e-38
gi|11466982 PSII D2-polypeptide [Euglena gracilis] >gi|400884|sp... 159 5e-38
gb|AAG26173.1| (AF123819) photosystem II D2 protein [Dioscorea b... 159 7e-38
gb|AAF73303.1| (AF188848) photosystem II D2 protein [Zamia furfu... 159 7e-38
emb|CAB67144.1| (AJ271079) PSII D2 protein [Oenothera elata subs... 159 7e-38
dbj|BAA83431.1| (AB013655) photosystem II protein D2 [Physcomitr... 158 9e-38
dbj|BAA83437.1| (AB013661) photosystem II protein D2 [Coleochaet... 158 1e-37
gi|11467176 PSII D2 protein [Zea mays] >gi|1346850|sp|P48184|PSB... 156 3e-37
gb|AAG26175.1| (AF123820) photosystem II D2 protein [Drimys wint... 156 4e-37
dbj|BAA83448.1| (AB013672) photosystem II protein D2 [Sphagnum f... 155 6e-37
gb|AAD10228.1| (U72055) photosystem II protein D1 [Anabaena sp. CA] 155 1e-36
dbj|BAA83453.1| (AB013677) photosystem II protein D2 [Haplomitri... 148 1e-34
dbj|BAA83443.1| (AB013667) photosystem II protein D2 [Anthoceros... 146 5e-34
gb|AAA84105.1| (M19053) thylakoid membrane protein [Chenopodium ... 144 1e-33
sp|P12463|PSBA_WHEAT PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID M... 143 4e-33
gb|AAB29963.1| photosystem II core D1 protein {Ala251Val substit... 114 2e-24
gb|AAB29962.1| photosystem II core D1 protein {Ile248Thr substit... 113 3e-24
pir||S09188 photosystem II 32K protein - spinach (fragments) 103 3e-21
dbj|BAB19668.1| (AB028938) photosynthetic reaction center M subu... 68 1e-10
dbj|BAA34815.1| (AB020599) photosynthetic reaction center L subu... 65 2e-09
dbj|BAA25722.1| (AB011074) photosynthetic reaction center L subu... 64 2e-09
sp|O66141|RCEL_ACIOR REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 64 3e-09
sp|O66139|RCEL_ACIMU REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 64 3e-09
sp|O66137|RCEL_ACICY REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 64 3e-09
dbj|BAA96516.1| (AB035570) L subunit of photosynthetic reaction ... 64 4e-09
dbj|BAA32995.1| (AB015708) photosynthetic reaction center L subu... 64 4e-09
dbj|BAA22646.1| (D50651) photosynthetic reaction center M subuni... 64 4e-09
sp|P11695|RCEL_CHLAU REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 64 4e-09
dbj|BAA22639.1| (D50648) photosynthetic reaction center L subuni... 63 6e-09
dbj|BAA25901.1| (AB010873) photosynthetic reaction center L subu... 62 8e-09
dbj|BAA32999.1| (AB015710) photosynthetic reaction center L subu... 61 2e-08
dbj|BAA32997.1| (AB015709) photosynthetic reaction center L subu... 61 2e-08
dbj|BAA78672.1| (AB027515) photosynthetic reaction center L subu... 61 2e-08
sp|P51763|RCEM_CHRVI REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 61 2e-08
dbj|BAA25903.1| (AB011073) photosynthetic reaction center L subu... 60 4e-08
pir||T10820 photosynthetic reaction center L - Rhodospirillum ph... 60 5e-08
sp|P51750|RCEL_RHOPH REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 60 5e-08
gb|AAA84544.1| (M16865) psbA peptide [Pisum sativum] 60 5e-08
sp|P10718|RCEM_RHORU REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 60 5e-08
dbj|BAA87900.1| (AB018690) photosynthetic reaction center M subu... 59 7e-08
dbj|BAA25551.1| (AB005218) L subunit of photosynthetic reaction ... 59 7e-08
sp|P51761|RCEM_RHOGE REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 59 7e-08
pdb|1EYS|M Chain M, Crystal Structure Of Photosynthetic Reaction... 59 9e-08
gb|AAG42645.1| (AF182374) photosynthetic reaction center M subun... 59 9e-08
dbj|BAA22650.1| (D50653) photosynthetic reaction center M subuni... 59 9e-08
dbj|BAA21083.1| (D50647) photosynthetic reaction center M subuni... 59 1e-07
gb|AAB41577.1| (U51298) photosynthetic reaction center M subunit... 59 1e-07
gb|AAD41904.1|AF159440_2 (AF159440) photosynthetic reaction cent... 58 2e-07
dbj|BAA26098.1| (AB013379) L subunit of photosynthetic reaction ... 58 2e-07
dbj|BAA25791.1| (AB010981) photosynthetic reaction center L subu... 58 2e-07
gb|AAB67247.1| (AF018955) reaction center M subunit [Ectothiorho... 58 2e-07
gb|AAB67246.1| (AF018955) reaction center L subunit [Ectothiorho... 58 2e-07
sp|P11847|RCEM_RHOCA REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 57 4e-07
dbj|BAA77030.1| (AB026182) photosynthetic reaction center M subu... 57 5e-07
dbj|BAA22797.1| (D50654) photosynthetic reaction center L subuni... 57 5e-07
pir||S68239 photosynthetic reaction center chain L, terbutryn-re... 57 5e-07
sp|P51760|RCEL_RHOGE REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 57 5e-07
pdb|1EYS|L Chain L, Crystal Structure Of Photosynthetic Reaction... 56 8e-07
dbj|BAA33002.1| (AB015977) photosynthetic reaction center M subu... 56 8e-07
dbj|BAA32993.1| (AB015707) photosynthetic reaction center L subu... 56 8e-07
dbj|BAA22649.1| (D50653) photosynthetic reaction center L subuni... 55 1e-06
dbj|BAA22645.1| (D50651) photosynthetic reaction center L subuni... 55 1e-06
dbj|BAA76948.1| (AB020784) pufM [Rhodovulum sulfidophilum] 55 1e-06
gb|AAD41903.1|AF159440_1 (AF159440) photosynthetic reaction cent... 55 2e-06
pdb|1DS8|M Chain M, Photosynthetic Reaction Center From Rhodobac... 54 2e-06
pdb|1QOV|M Chain M, Photosynthetic Reaction Center Mutant With A... 54 2e-06
pir||T50761 reaction center protein chain M [imported] - Rhodoba... 54 2e-06
pdb|1AIJ|S Chain S, Photosynthetic Reaction Center From Rhodobac... 54 2e-06
dbj|BAA09314.1| (D50647) photosynthetic reaction center L subuni... 54 2e-06
pdb|1PSS|M Chain M, Photosynthetic Reaction Center (Wild-Type) 54 2e-06
pdb|2RCR|M Chain M, Photosynthetic Reaction Center From (Rhodoba... 54 2e-06
prf||1703253B photosyn reaction center M [Chloroflexus aurantiacus] 54 2e-06
sp|P02953|RCEM_RHOSH REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 54 2e-06
pdb|1E6D|M Chain M, Photosynthetic Reaction Center Mutant With T... 54 3e-06
pdb|1MPS|M Chain M, Photosynthetic Reaction Center Mutant With P... 54 3e-06
sp|P51762|RCEL_CHRVI REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 54 3e-06
dbj|BAA26099.1| (AB013379) M subunit of photosynthetic reaction ... 54 3e-06
dbj|BAA22648.1| (D50652) photosynthetic reaction center M subuni... 54 3e-06
dbj|BAA22643.1| (D50650) photosynthetic reaction center L subuni... 54 3e-06
emb|CAA30070.1| (X07018) psbD gene product (123 AA) [Synechocyst... 54 3e-06
pdb|1E14|M Chain M, Photosynthetic Reaction Center Mutant With P... 53 4e-06
dbj|BAA25790.1| (AB010830) photosynthetic reaction center M subu... 53 4e-06
dbj|BAA25552.1| (AB005218) M subunit of photosynthetic reaction ... 53 4e-06
pdb|1YST|M Chain M, Photosynthetic Reaction Center (Wild Type) 53 4e-06
pir||S24213 reaction center protein chain M - Rhodobacter sphaer... 53 4e-06
sp|P09438|RCEM_CHLAU REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 53 4e-06
dbj|BAA94256.1| (AB031016) photosynthetic reaction center M subu... 53 5e-06
dbj|BAA94252.1| (AB031015) photosynthetic reaction center M subu... 53 5e-06
dbj|BAA25728.1| (AB012060) photosynthetic reaction center M subu... 53 5e-06
sp|O83005|RCEL_RHOPA REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 53 7e-06
dbj|BAB18590.1| (AB043944) photosystem Q(B) protein [Rosa phoeni... 52 1e-05
dbj|BAA78673.1| (AB027515) photosynthetic reaction center M subu... 52 1e-05
dbj|BAA22798.1| (D50654) photosynthetic reaction center M subuni... 52 1e-05
sp|P19057|RCEL_RHOCA REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 52 1e-05
dbj|BAA25902.1| (AB010873) photosynthetic reaction center M subu... 52 2e-05
dbj|BAA25789.1| (AB010830) photosynthetic reaction center L subu... 52 2e-05
dbj|BAA22647.1| (D50652) photosynthetic reaction center L subuni... 52 2e-05
dbj|BAA77029.1| (AB026182) photosynthetic reaction center L subu... 51 2e-05
dbj|BAA22644.1| (D50650) photosynthetic reaction center M subuni... 51 2e-05
dbj|BAA76947.1| (AB020784) pufL [Rhodovulum sulfidophilum] 51 3e-05
dbj|BAB19667.1| (AB028938) photosynthetic reaction center L subu... 50 4e-05
dbj|BAA32550.1| (AB016989) photosynthetic reaction center M subu... 50 4e-05
sp|P10717|RCEL_RHORU REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 50 4e-05
sp|P26279|RCEM_ERYSP REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 50 4e-05
emb|CAA40819.1| (X57597) pufM [Erythrobacter sp.] 50 4e-05
gb|AAF15271.1|AF190379_1 (AF190379) photosystem Q(B) protein [Eu... 50 5e-05
dbj|BAA32996.1| (AB015708) photosynthetic reaction center M subu... 50 5e-05
dbj|BAA32552.1| (AB016990) photosynthetic reaction center M subu... 50 5e-05
dbj|BAA25562.1| (AB005220) M subunit of photosynthetic reaction ... 50 5e-05
gi|7524700 3' flagment of psbA; pseudo [Pinus thunbergii] >gi|12... 50 5e-05
pdb|1PST|M Chain M, Photosynthetic Reaction Center Mutant With H... 50 5e-05
gb|AAF78134.1| (AF129842) PsbA [Cynara cardunculus] 50 6e-05
dbj|BAA94255.1| (AB031016) photosynthetic reaction center L subu... 50 6e-05
dbj|BAA94251.1| (AB031015) photosynthetic reaction center L subu... 50 6e-05
dbj|BAA25727.1| (AB012060) photosynthetic reaction center L subu... 50 6e-05
dbj|BAA25566.1| (AB005222) M subunit of photosynthetic reaction ... 50 6e-05
gb|AAF15263.1|AF190368_1 (AF190368) photosystem Q(B) protein [Lo... 49 8e-05
dbj|BAA25564.1| (AB005221) M subunit of photosynthetic reaction ... 49 8e-05
sp|P51751|RCEM_RHOPH REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 49 8e-05
pdb|1DXR|M Chain M, Photosynthetic Reaction Center From Rhodopse... 49 8e-05
sp|P06010|RCEM_RHOVI REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTH... 49 8e-05
gb|AAF78131.1| (AF129839) PsbA [Carduus nutans] 49 1e-04
dbj|BAA96517.1| (AB035570) M subunit of photosynthetic reaction ... 49 1e-04
dbj|BAA87899.1| (AB018690) photosynthetic reaction center L subu... 49 1e-04
dbj|BAA33000.1| (AB015710) photosynthetic reaction center M subu... 49 1e-04
gb|AAF15268.1|AF190373_1 (AF190373) photosystem Q(B) protein [An... 48 1e-04
gb|AAF15264.1|AF190369_1 (AF190369) photosystem Q(B) protein [My... 48 1e-04
gb|AAD45368.1|AF161593_1 (AF161593) photosynthetic reaction cent... 48 1e-04
dbj|BAA32998.1| (AB015709) photosynthetic reaction center M subu... 48 1e-04
dbj|BAA32549.1| (AB016989) photosynthetic reaction center L subu... 48 1e-04
dbj|BAA22641.1| (D50649) photosynthetic reaction center L subuni... 48 1e-04
sp|P26280|RCEL_ERYSP REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 48 1e-04
dbj|BAA25904.1| (AB011073) photosynthetic reaction center M subu... 48 2e-04
dbj|BAA22640.1| (D50648) photosynthetic reaction center M subuni... 48 2e-04
prf||1308226B photosynthetic reaction center M [Rhodopseudomonas... 48 2e-04
pdb|1DXR|L Chain L, Photosynthetic Reaction Center From Rhodopse... 48 2e-04
gb|AAF78130.1| (AF129838) PsbA [Arctium lappa] >gi|8650251|gb|AA... 48 2e-04
gb|AAD45367.1|AF161592_1 (AF161592) photosynthetic reaction cent... 48 2e-04
gb|AAD45366.1|AF161591_1 (AF161591) photosynthetic reaction cent... 48 2e-04
gb|AAG42644.1| (AF182374) photosynthetic reaction center L subun... 47 4e-04
dbj|BAA32551.1| (AB016990) photosynthetic reaction center L subu... 47 4e-04
dbj|BAA25792.1| (AB010981) photosynthetic reaction center M subu... 47 4e-04
dbj|BAA25723.1| (AB011074) photosynthetic reaction center M sub... 47 4e-04
dbj|BAA22642.1| (D50649) photosynthetic reaction center M subuni... 47 4e-04
gb|AAD45365.1|AF161590_1 (AF161590) photosynthetic reaction cent... 46 5e-04
pdb|6PRC|L Chain L, Photosynthetic Reaction Center From Rhodopse... 46 5e-04
sp|P06009|RCEL_RHOVI REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 46 5e-04
gb|AAF15266.1|AF190371_1 (AF190371) photosystem Q(B) protein [Eu... 46 7e-04
dbj|BAA34816.1| (AB020599) photosynthetic reaction center M subu... 46 7e-04
dbj|BAA33014.1| (AB017041) photosynthetic reaction center L subu... 46 7e-04
dbj|BAA32994.1| (AB015707) photosynthetic reaction center M subu... 46 7e-04
pir||T50760 reaction center protein chain L [imported] - Rhodoba... 46 9e-04
dbj|BAA33015.1| (AB017041) photosynthetic reaction center M subu... 46 9e-04
pdb|1YST|L Chain L, Photosynthetic Reaction Center (Wild Type) 46 9e-04
pdb|1PSS|L Chain L, Photosynthetic Reaction Center (Wild-Type) >... 46 9e-04
pdb|1E14|L Chain L, Photosynthetic Reaction Center Mutant With P... 46 9e-04
sp|P02954|RCEL_RHOSH REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTH... 46 9e-04
gb|AAF78142.1| (AF129850) PsbA [Ptilostemon afer] 45 0.002
gb|AAF15265.1|AF190370_1 (AF190370) photosystem Q(B) protein [Al... 44 0.003
emb|CAB39025.1| (AL034559) hypothetical protein, PFC0885c [Plasm... 37 0.34
pir||T18841 hypothetical protein C01G6.7 - Caenorhabditis elegan... 35 1.3
dbj|BAB21220.1| (AB048211) photosystem Q(B) protein [Rosa stellata] 34 2.3
dbj|BAB02093.1| (AB026655) gb|AAF24841.1~gene_id:MXC7.5~strong s... 34 2.3
gb|AAG59897.1|AF333236_1 (AF333236) photosynthetic reaction cent... 34 3.9
gb|AAF15270.1|AF190377_1 (AF190377) photosystem Q(B) protein [Co... 33 5.1
gi|11467870 subunit 1 of NADH-plastoquinoneoxidoreductase [Nephr... 33 5.1
gb|AAA69162.1| (U28377) probable hydrogenase-2 cytochrome b subu... 33 6.7
gi|5835524 NADH dehydrogenase subunit 5 [Branchiostoma lanceolat... 32 8.7
gi|5881423 NADH dehydrogenase subunit 5 [Branchiostoma floridae]... 32 8.7
>sp|P06585|PSBA_PEA PHOTOSYSTEM Q(B) PROTEIN PRECURSOR (32 KD THYLAKOID MEMBRANE
PROTEIN) (PHOTOSYSTEM II PROTEIN D1)
pir||F2PMD1 photosystem II protein D1 precursor - garden pea chloroplast
gb|AAA84547.1| (M11005) 34.5 Kd protein [Pisum sativum]
Length = 353
Score = 728 bits (1858), Expect = 0.0
Identities = 352/353 (99%), Positives = 353/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRDSENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
>sp|P11848|PSBA_SINAL PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||A21730 photosystem II protein D1 precursor - white mustard chloroplast
emb|CAA25093.1| (X00340) pre-M(r)32000 PSII protein [Sinapis alba]
Length = 353
Score = 726 bits (1853), Expect = 0.0
Identities = 351/353 (99%), Positives = 353/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE+PSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVESPSING 353
>sp|P18290|PSBA_BRANA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1) (TRIAZINE-RESISTANCE
PROTEIN)
gb|AAA84447.1| (M36720) triazine-resistance [Brassica napus]
prf||1306442A gene psbA [Brassica napus]
Length = 353
Score = 725 bits (1852), Expect = 0.0
Identities = 351/353 (99%), Positives = 352/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYA FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYAGFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
>sp|P02957|PSBA_SOYBN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||FMSY32 photosystem II protein D1 precursor - soybean chloroplast
emb|CAA24986.1| (X00152) psb A gene [Glycine max]
Length = 353
Score = 725 bits (1852), Expect = 0.0
Identities = 350/353 (99%), Positives = 353/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA++APSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIDAPSING 353
>gi|7525013 PSII 32 KDa protein [Arabidopsis thaliana]
sp|Q33592|PSBA_ARATH PHOTOSYSTEM Q(B) PROTEIN (32 KDA THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S57265 photosystem II protein D1 precursor - Arabidopsis thaliana
chloroplast
emb|CAA56270.1| (X79898) psbA [Arabidopsis thaliana]
dbj|BAA84365.1| (AP000423) PSII 32 KDa protein [Arabidopsis thaliana]
emb|CAB67123.1| (AJ271079) PSII D1 protein [Oenothera elata subsp. hookeri]
Length = 353
Score = 725 bits (1851), Expect = 0.0
Identities = 351/353 (99%), Positives = 352/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gi|11465935 PSII 32kd protein [Nicotiana tabacum]
ref|NP_054912.1| PSII 32 kD protein [Spinacia oleracea]
sp|P02955|PSBA_SPIOL PHOTOSYSTEM Q(B) PROTEIN PRECURSOR (32 KDA THYLAKOID MEMBRANE
PROTEIN) (PHOTOSYSTEM II PROTEIN D1)
pir||FMSP32 photosystem II protein D1 precursor [validated] - spinach
chloroplast
pir||FMNT3D photosystem II protein D1 precursor - Debney's tobacco chloroplast
pir||FMSX3N photosystem II protein D1 precursor - black nightshade chloroplast
pir||F2CN1U photosystem II protein D1 precursor - upland cotton chloroplast
pir||F2NT1C photosystem II protein D1 precursor - curled-leaved tobacco
chloroplast
emb|CAA33895.1| (X15885) QB protein (AA 1-353) [Gossypium hirsutum]
emb|CAA30817.1| (X08016) psbA polypeptide (AA 1-353) [Nicotiana plumbaginifolia]
emb|CAA77338.1| (Z00044) PSII 32kd protein [Nicotiana tabacum]
emb|CAA25815.1| (X01651) psbA protein [Solanum nigrum]
gb|AAA84687.1| (J01448) psbA protein [Nicotiana debneyi]
emb|CAA75027.1| (Y14732) photosystem II D1 protein [Chenopodium rubrum]
dbj|BAA76899.1| (AB025939) QB protein [Nicotiana glutinosa]
emb|CAB88705.1| (AJ400848) PSII 32 kD protein [Spinacia oleracea]
prf||0901310A protein psbA,thylakoid membrane [Spinacia oleracea]
Length = 353
Score = 725 bits (1850), Expect = 0.0
Identities = 350/353 (99%), Positives = 352/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>sp|P02956|PSBA_AMAHY PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||FMMH32 photosystem II protein D1 precursor - green amaranth chloroplast
Length = 353
Score = 724 bits (1849), Expect = 0.0
Identities = 349/353 (98%), Positives = 352/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>dbj|BAA76900.1| (AB025940) QB protein [Nicotiana tabacum]
Length = 353
Score = 723 bits (1847), Expect = 0.0
Identities = 349/353 (98%), Positives = 352/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYA+FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYATFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>sp|P36491|PSBA_POPDE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S42492 photosystem II protein D1 precursor - cottonwood
emb|CAA55040.1| (X78204) D1 protein [Populus deltoides]
Length = 353
Score = 723 bits (1847), Expect = 0.0
Identities = 350/353 (99%), Positives = 351/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE PS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSTNG 353
>emb|CAA30818.1| (X08017) psbA polypeptide (AA 1-353) [Nicotiana plumbaginifolia]
Length = 353
Score = 723 bits (1847), Expect = 0.0
Identities = 349/353 (98%), Positives = 352/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYA+FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYANFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>sp|P04998|PSBA_MEDSA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||A25580 photosystem II protein D1 precursor - alfalfa chloroplast
emb|CAA28646.1| (X04973) Q(B) polypeptide (AA 1-353) [Medicago sativa]
Length = 353
Score = 723 bits (1847), Expect = 0.0
Identities = 350/353 (99%), Positives = 351/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SE LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRDSETLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNII GAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIICGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
>sp|Q33282|PSBA_VIGUN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
emb|CAA56907.1| (X80932) photosystem II D1 protein [Vigna unguiculata]
Length = 353
Score = 723 bits (1846), Expect = 0.0
Identities = 349/353 (98%), Positives = 352/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFG SLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGSSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS+NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAMEAPSVNG 353
>sp|P32036|PSBA_CUSRE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S33912 photosystem II protein D1 precursor - southern Asian dodder
chloroplast
emb|CAA47847.1| (X67512) D1-protein [Cuscuta reflexa]
prf||2113216A psbA gene [Cuscuta reflexa]
Length = 353
Score = 723 bits (1846), Expect = 0.0
Identities = 348/353 (98%), Positives = 352/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNI+SGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIVSGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAP+ NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPATNG 353
>sp|P04999|PSBA_PETHY PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||A25579 photosystem II protein D1 precursor - petunia chloroplast
emb|CAA28647.1| (X04974) Q(B) polypeptide (AA 1-353) [Petunia x hybrida]
Length = 353
Score = 723 bits (1846), Expect = 0.0
Identities = 349/353 (98%), Positives = 352/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITS+ENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSSENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>gb|AAD00106.1| (U63020) D1 protein [Magnolia pyramidata]
Length = 353
Score = 723 bits (1845), Expect = 0.0
Identities = 350/353 (99%), Positives = 351/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>sp|P10510|PSBA_SECCE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
emb|CAB58232.1| (X13327) herbicide-binding protein D1 [Secale cereale]
Length = 353
Score = 722 bits (1843), Expect = 0.0
Identities = 349/353 (98%), Positives = 351/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE PSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353
>sp|P04848|PSBA_TOBAC PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||FMNT32 photosystem II protein D1 precursor - common tobacco chloroplast
prf||1211235A photosystem II 32kD protein [Nicotiana tabacum]
Length = 353
Score = 722 bits (1843), Expect = 0.0
Identities = 349/353 (98%), Positives = 351/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASV EWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVHEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>emb|CAA25252.1| (X00616) P32 protein [Nicotiana tabacum]
Length = 353
Score = 721 bits (1841), Expect = 0.0
Identities = 349/353 (98%), Positives = 351/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVL FL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLDFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>gi|11466764 PSII 32kDa protein [Oryza sativa]
sp|P12094|PSBA_ORYSA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||FMRZ32 photosystem II protein D1 precursor - rice chloroplast
emb|CAA34007.1| (X15901) PSII 32kDa protein [Oryza sativa]
gb|AAA84591.1| (M36191) Q-B protein (psbA) [Oryza sativa]
prf||1503143A psbA gene [Oryza sativa]
prf||1510376A quinone binding protein [Oryza sativa]
prf||1603356A photosystem II 32kD protein [Oryza sativa]
Length = 353
Score = 721 bits (1841), Expect = 0.0
Identities = 348/353 (98%), Positives = 351/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+E PS+NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAALEVPSLNG 353
>gb|AAA74185.1| (U25659) photosystem II protein D1 [Solanum nigrum]
Length = 353
Score = 721 bits (1840), Expect = 0.0
Identities = 348/353 (98%), Positives = 350/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLH L
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHLL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYA FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYAGFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 353
>sp|P05337|PSBA_HORVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2BHD1 photosystem II protein D1 precursor - barley chloroplast
emb|CAA30763.1| (X07942) psbA protein (AA 1-353) [Hordeum vulgare]
emb|CAA30400.1| (X07521) D1 protein (psbA) (AA 1-353) [Hordeum vulgare]
gb|AAA84046.1| (M38374) herbicide-binding protein [Hordeum vulgare]
Length = 353
Score = 721 bits (1840), Expect = 0.0
Identities = 348/353 (98%), Positives = 351/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE P+ING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPAING 353
>pir||F2NUD1 photosystem II protein D1 precursor - rye chloroplast
Length = 353
Score = 719 bits (1837), Expect = 0.0
Identities = 348/353 (98%), Positives = 350/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA VDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAFVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE PSING
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEVPSING 353
>gi|11467171 PSII 32 KDa protein [Zea mays]
sp|P48183|PSBA_MAIZE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S58531 photosystem II protein D1 precursor - maize chloroplast
emb|CAA60265.1| (X86563) PSII 32 KDa protein [Zea mays]
Length = 353
Score = 718 bits (1832), Expect = 0.0
Identities = 346/353 (98%), Positives = 350/353 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA+E P +NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAALEVPYLNG 353
>dbj|BAA82767.1| (AB020584) psbA [Conocephalum conicum]
Length = 353
Score = 715 bits (1826), Expect = 0.0
Identities = 343/353 (97%), Positives = 350/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353
>sp|P27201|PSBA_SPIOG PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2DWD1 photosystem II protein D1 precursor - Spirodela oligorhiza
chloroplast
emb|CAA42156.1| (X59557) D1 protein [Spirodela punctata]
Length = 353
Score = 715 bits (1826), Expect = 0.0
Identities = 345/353 (97%), Positives = 349/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LWGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGV CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVRCYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFT+LGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTSLGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS G
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTIG 353
>dbj|BAA82757.1| (AB020574) psbA [Conocephalum conicum]
dbj|BAA82758.1| (AB020575) psbA [Conocephalum conicum]
dbj|BAA82759.1| (AB020576) psbA [Conocephalum conicum]
dbj|BAA82761.1| (AB020578) psbA [Conocephalum conicum]
dbj|BAA82762.1| (AB020579) psbA [Conocephalum conicum]
dbj|BAA82763.1| (AB020580) psbA [Conocephalum conicum]
dbj|BAA82765.1| (AB020582) psbA [Conocephalum conicum]
dbj|BAA82766.1| (AB020583) psbA [Conocephalum conicum]
dbj|BAA82768.1| (AB020585) psbA [Conocephalum conicum]
dbj|BAA82769.1| (AB020586) psbA [Conocephalum conicum]
dbj|BAA82771.1| (AB020588) psbA [Conocephalum conicum]
dbj|BAA82772.1| (AB020589) psbA [Conocephalum conicum]
dbj|BAA82773.1| (AB020602) psbA [Conocephalum conicum]
dbj|BAA82774.1| (AB020603) psbA [Conocephalum conicum]
dbj|BAA82778.1| (AB020607) psbA [Conocephalum conicum]
Length = 353
Score = 714 bits (1824), Expect = 0.0
Identities = 342/353 (96%), Positives = 350/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353
>gi|11466695 psbA [Marchantia polymorpha]
sp|P06402|PSBA_MARPO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2LVD1 photosystem II protein D1 precursor - liverwort (Marchantia
polymorpha) chloroplast
emb|CAA28077.1| (X04465) psbA [Marchantia polymorpha]
Length = 353
Score = 713 bits (1821), Expect = 0.0
Identities = 342/353 (96%), Positives = 350/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES ++WGRFC+W+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASIWGRFCDWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353
>dbj|BAA82776.2| (AB020605) psbA [Conocephalum conicum]
Length = 353
Score = 713 bits (1820), Expect = 0.0
Identities = 341/353 (96%), Positives = 349/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL AWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLTAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353
>dbj|BAA82764.1| (AB020581) psbA [Conocephalum conicum]
dbj|BAA82777.1| (AB020606) psbA [Conocephalum conicum]
Length = 353
Score = 712 bits (1818), Expect = 0.0
Identities = 341/353 (96%), Positives = 349/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV IWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVSIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353
>dbj|BAA82760.1| (AB020577) psbA [Conocephalum conicum]
Length = 353
Score = 712 bits (1818), Expect = 0.0
Identities = 341/353 (96%), Positives = 349/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTAL ISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALSISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353
>dbj|BAA82779.1| (AB020619) similar to SWISS-PROT:p06402 [Conocephalum conicum]
dbj|BAA82780.1| (AB020620) similar to SWESS-PROT:p06402 [Conocephalum conicum]
Length = 353
Score = 712 bits (1817), Expect = 0.0
Identities = 340/353 (96%), Positives = 349/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES ++WGRFCNW+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGI+TM FNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGINTMGFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353
>dbj|BAA82770.1| (AB020587) psbA [Conocephalum conicum]
dbj|BAA82775.2| (AB020604) psbA [Conocephalum conicum]
Length = 353
Score = 711 bits (1815), Expect = 0.0
Identities = 341/353 (96%), Positives = 349/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES ++WGRFCNW+TSTENRL IGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLNIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYE+IVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYEIIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353
>dbj|BAA82782.1| (AB020622) similar to SWISS-PROT:p06402 [Dumortiera hirsuta]
Length = 353
Score = 711 bits (1814), Expect = 0.0
Identities = 341/353 (96%), Positives = 349/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES ++WGRFCNW+TSTENRL IGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASIWGRFCNWVTSTENRLNIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QE+ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEQETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPAVNG 353
>sp|P13910|PSBA_VICFA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2VFD1 photosystem II protein D1 precursor - fava bean chloroplast
emb|CAA35688.1| (X17694) Q-B protein (AA 1-353) [Vicia faba]
Length = 353
Score = 711 bits (1814), Expect = 0.0
Identities = 343/353 (97%), Positives = 348/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+S NLWGRFCNWIT+TENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRDSHNLWGRFCNWITTTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSA IGLHFYPIWEAASVD+WLY GGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAVIGLHFYPIWEAASVDDWLYIGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWI VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIVVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAM GSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMQGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAV+APSI+G
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVDAPSISG 353
>emb|CAA04456.1| (AJ001003) 32 kD PSII D1 protein [Picea abies]
Length = 353
Score = 710 bits (1813), Expect = 0.0
Identities = 343/353 (97%), Positives = 348/353 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAI+ERRES NLWGRFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAIIERRESANLWGRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTEN+SAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENQSANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV GIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVAGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE+ SI G
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVESISIGG 353
>sp|P50155|PSBA_PICAB PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S44245 photosystem II protein D1 precursor - Norway spruce
emb|CAA55629.1| (X78995) D1 protein [Picea abies]
Length = 353
Score = 708 bits (1807), Expect = 0.0
Identities = 342/353 (96%), Positives = 347/353 (97%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAI+ERRES NLWGRFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAIIERRESANLWGRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTEN+SAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENQSANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV GIWFTALGISTMA NLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVAGIWFTALGISTMALNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE+ SI G
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVESISIGG 353
>gi|7524753 PSII 32kDa protein [Pinus thunbergii]
sp|P24684|PSBA_PINCO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S15957 photosystem II protein D1 precursor - shore pine chloroplast
pir||S29327 photosystem II protein D1 precursor - Japanese black pine
chloroplast
emb|CAA37757.1| (X53721) D1 protein of photosystem II [Pinus contorta]
emb|CAA37758.1| (X53722) D1 protein of photosystem II [Pinus contorta]
emb|CAA40381.1| (X57097) D1 protein of photosystem II [Pinus contorta]
emb|CAA40383.1| (X57097) D1 protein of photosystem II [Pinus contorta]
dbj|BAA02024.1| (D11467) photosystem II D1 protein [Pinus thunbergii]
dbj|BAA04462.1| (D17510) PSII 32kDa protein [Pinus thunbergii]
Length = 353
Score = 708 bits (1807), Expect = 0.0
Identities = 342/353 (96%), Positives = 347/353 (97%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAI+ERRES NLW RFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAIIERRESANLWSRFCDWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTEN+SAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENQSANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV GIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVAGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE+ SI G
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVESISIGG 353
>dbj|BAA82781.1| (AB020621) similar to SWISS-PROT:p06402 [Conocephalum
supradecompositum]
Length = 353
Score = 705 bits (1800), Expect = 0.0
Identities = 338/353 (95%), Positives = 347/353 (97%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES ++WGRFCNW+TSTE RLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASIWGRFCNWVTSTETRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELS+RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSYRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRAN GMEVMHERNAHNFP +LAA+EAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANPGMEVMHERNAHNFPPNLAAIEAPAVNG 353
>gb|AAK11251.1|AF329007_1 (AF329007) PSII D1 protein [Prunus x yedoensis]
Length = 353
Score = 703 bits (1794), Expect = 0.0
Identities = 342/353 (96%), Positives = 346/353 (97%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFI+A IAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIMALIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIIS AIIPTSAAIGLHFYPIWEAASVDEWLY+GGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGLHFYPIWEAASVDEWLYDGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACY GRE ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYRGRELELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN+G RFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANDGSRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLFFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gb|AAG60680.1|AF315340_1 (AF315340) PSII D1 protein [Prunus sargentii]
Length = 353
Score = 702 bits (1791), Expect = 0.0
Identities = 342/353 (96%), Positives = 344/353 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIR PVSGSLLYGNNIIS AIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIRVPVSGSLLYGNNIISRAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHG LVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGPLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYN VAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF +NGF
Sbjct: 241 QEEETYNFVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFFINGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gb|AAG60679.1|AF315339_1 (AF315339) PSII D1 protein [Prunus x yedoensis]
Length = 353
Score = 702 bits (1791), Expect = 0.0
Identities = 342/353 (96%), Positives = 345/353 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFI+A IAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIMALIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLY+GGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYDGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGRE ELSFRLGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGRELELSFRLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL RETTENESANEG RFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLTRETTENESANEGSRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gb|AAG60681.1|AF315341_1 (AF315341) PSII D1 protein [Prunus serrulata var. quelpaertensis]
Length = 353
Score = 700 bits (1788), Expect = 0.0
Identities = 342/353 (96%), Positives = 343/353 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMI TLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIATLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACY GRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYRGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIV AHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVPAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gi|7524765 photosystem II D1 protein [Chlorella vulgaris]
sp|P56318|PSBA_CHLVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||T07195 photosystem II protein D1 - Chlorella vulgaris chloroplast
dbj|BAA57842.1| (AB001684) photosystem II D1 protein [Chlorella vulgaris]
Length = 353
Score = 700 bits (1788), Expect = 0.0
Identities = 335/353 (94%), Positives = 344/353 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LW RFC W+TSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESASLWARFCEWVTSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTS AIGLHFYPIWEAAS+DEWLYNGGPY+LIV HF
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLIVCHFF 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LG+ YMGREWELSFRLGMRPWIAVAYSAPVAAATAVF+IYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGICSYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA VEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAVVEAPAVNG 353
>gb|AAK11250.1|AF329006_1 (AF329006) PSII D1 protein [Prunus x yedoensis]
Length = 353
Score = 699 bits (1785), Expect = 0.0
Identities = 340/353 (96%), Positives = 345/353 (97%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFI+A IAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIMALIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIIS AIIPTSAAIGLHFYPIWEAASVDEWLY+GGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGLHFYPIWEAASVDEWLYDGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACY GRE ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYRGRELELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRE TENE+AN+G RFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIREPTENETANDGSRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLFFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gb|AAK11253.1|AF329009_1 (AF329009) PSII D1 protein [Prunus x yedoensis]
Length = 353
Score = 698 bits (1783), Expect = 0.0
Identities = 342/353 (96%), Positives = 343/353 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEG RFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGSRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF NGF
Sbjct: 241 QEEETYNIVAAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFFKNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gb|AAG60670.1|AF314009_1 (AF314009) PSII D1 protein [Prunus x yedoensis]
Length = 353
Score = 698 bits (1783), Expect = 0.0
Identities = 342/353 (96%), Positives = 343/353 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIIS AIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACY GRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYRGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEG RFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGSRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF NGF
Sbjct: 241 QEEETYNIVAAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFFKNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gb|AAK11252.1|AF329008_1 (AF329008) PSII D1 protein [Prunus x yedoensis]
Length = 353
Score = 697 bits (1780), Expect = 0.0
Identities = 341/353 (96%), Positives = 343/353 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFI+AFIAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIMAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEG RFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGSRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF NGF
Sbjct: 241 QEEETYNIVAAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFFKNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gb|AAG60671.1|AF314010_1 (AF314010) PSII D1 protein [Prunus x yedoensis]
Length = 353
Score = 697 bits (1780), Expect = 0.0
Identities = 339/353 (96%), Positives = 344/353 (97%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFI+A IAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIMALIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLY+GGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYDGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGRE ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGRELELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL RE TENE+AN+G RFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLTREPTENETANDGSRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLFFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gb|AAK11254.1|AF329010_1 (AF329010) PSII D1 protein [Prunus x yedoensis]
Length = 353
Score = 696 bits (1776), Expect = 0.0
Identities = 341/353 (96%), Positives = 342/353 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIA IAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIALIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIIS AIIPTSAAIG HFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGSHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACY GRE ELSF LGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYRGRELELSFPLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEG RFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGSRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF NGF
Sbjct: 241 QEEETYNIVAAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFFKNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>sp|P35860|PSBA_CHLEL PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S14137 photosystem II protein D1 - Chlorella ellipsoidea chloroplast
emb|CAA44621.1| (X62800) chloroplast Q-B binding protein [Chlorella ellipsoidea]
Length = 352
Score = 695 bits (1773), Expect = 0.0
Identities = 332/351 (94%), Positives = 341/351 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LW RFC WITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESASLWARFCEWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSG LLYGNNIISGA++PTS AIGLHFYPIWEAAS+DEWLYNGGPY+LIV HF
Sbjct: 61 DGIREPVSGYLLYGNNIISGAVVPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLIVCHFF 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LG+ CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVF+IYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGICCYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENES N GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESRNAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSI 351
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA+VEAPSI
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEAPSI 351
>sp|P09752|PSBA_CHLMO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2KM1M photosystem II protein D1 precursor - Chlamydomonas moewusii
chloroplast
emb|CAA31841.1| (X13486) D1 protein [Chlamydomonas moewusii]
emb|CAA33622.1| (X15601) 32 kilodalton thylakoid membrane protein D1 or Q(B)
[Chlamydomonas moewusii]
Length = 353
Score = 693 bits (1770), Expect = 0.0
Identities = 329/352 (93%), Positives = 341/352 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LW RFC WITSTENR+YIGWFGV+MIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWARFCEWITSTENRIYIGWFGVIMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGA+IPTS AIGLHFYPIWEAAS+DEWLYNGGPY+LIV HF
Sbjct: 61 DGIREPVSGSLLYGNNIISGAVIPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLIVCHFF 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVF+IYPIGQGSFSDGMPLGISGTF
Sbjct: 121 IGICCYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGLSTMAFNLNGL 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSIN 352
NFNQSVVDS GRV+NTWADIINRANLGMEVMHERNAHNFPLDLAA EAPSIN
Sbjct: 301 NFNQSVVDSNGRVLNTWADIINRANLGMEVMHERNAHNFPLDLAAFEAPSIN 352
>gi|11467759 D1 reaction-center protein of photosystem II [Nephroselmis
olivacea]
gb|AAD54781.1|AF137379_4 (AF137379) D1 reaction-center protein of photosystem II
[Nephroselmis olivacea]
Length = 353
Score = 693 bits (1769), Expect = 0.0
Identities = 331/353 (93%), Positives = 345/353 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES ++W RFC+W+TSTENRLYIGWFGVLMIP LLTATSVFII FIAAPPVDI
Sbjct: 1 MTAILERRESTSVWARFCDWVTSTENRLYIGWFGVLMIPLLLTATSVFIIGFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLL+GNNIISGAIIP+SAAIG+HFYPIWEAAS+DEWLYNGG YELIVLHFL
Sbjct: 61 DGIREPVSGSLLFGNNIISGAIIPSSAAIGIHFYPIWEAASIDEWLYNGGCYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVV IWFTALG+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVCIWFTALGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA+V+AP++ G
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVDAPAVQG 353
>gb|AAG60682.1|AF315342_1 (AF315342) PSII D1 protein [Prunus subhirtella var. ascendens]
Length = 353
Score = 689 bits (1759), Expect = 0.0
Identities = 336/353 (95%), Positives = 339/353 (95%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRESE+LWGRFC WITSTENRLYIGWFGVLMIPTLLTATSVFIIA IAAPPVDI
Sbjct: 1 MTAILERRESESLWGRFCKWITSTENRLYIGWFGVLMIPTLLTATSVFIIALIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIIS AIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISRAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACY GRE ELSF LGMRPWIAVAY APVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYRGRELELSFPLGMRPWIAVAYPAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQA+HNILMHPFHMLGVAGVFGGSLFSAMHGS T SL RETTENESANEGYRFG
Sbjct: 181 NFMIVFQADHNILMHPFHMLGVAGVFGGSLFSAMHGSRGTPSLTRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEET+NIVAAHGYFGRL FQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF
Sbjct: 241 QEEETHNIVAAHGYFGRLTFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIIN ANLGMEVMHERNAHNFPLDLAAVEAPS NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINHANLGMEVMHERNAHNFPLDLAAVEAPSTNG 353
>gi|11466347 D1 reaction center protein of photosystem II [Mesostigma viride]
gb|AAF43791.1|AF166114_3 (AF166114) D1 reaction center protein of photosystem II [Mesostigma
viride]
Length = 353
Score = 689 bits (1758), Expect = 0.0
Identities = 327/353 (92%), Positives = 342/353 (96%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES NLWGRFC +ITSTENRLYIGWFGV+MIP LLTA SV+IIAF+AAPPVDI
Sbjct: 1 MTATLERRESANLWGRFCEFITSTENRLYIGWFGVIMIPCLLTAISVYIIAFVAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISG++IP S AIGLHFYPIWEAAS+DEWLYNGGPY ++V HFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGSVIPMSNAIGLHFYPIWEAASLDEWLYNGGPYLMVVCHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LG+ACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGIACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA WPVVGIWFTA+GISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAVWPVVGIWFTAMGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA+VEAP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASVEAPAVNG 353
>sp|P07753|PSBA_CHLRE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||A22780 photosystem II protein D1 - Chlamydomonas reinhardtii chloroplast
emb|CAA25670.1| (X01424) herbicide binding protein [Chlamydomonas reinhardtii]
prf||1102190A protein psbA [Chlamydomonas reinhardtii]
Length = 352
Score = 688 bits (1755), Expect = 0.0
Identities = 327/352 (92%), Positives = 341/352 (95%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRE+ +LW RFC WITSTENRLYIGWFGV+MIP LLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRENSSLWARFCEWITSTENRLYIGWFGVIMIPCLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNII+GA+IPTS AIGLHFYPIWEAAS+DEWLYNGGPY+LIV HFL
Sbjct: 61 DGIREPVSGSLLYGNNIITGAVIPTSNAIGLHFYPIWEAASLDEWLYNGGPYQLIVCHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGV CYMGREWELSFRLGMRPWIAVAYSAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVYCYMGREWELSFRLGMRPWIAVAYSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGLSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSIN 352
NFNQSVVDSQGRV+NTWADIINRANLGMEVMHERNAHNFPLDLA+ + S N
Sbjct: 301 NFNQSVVDSQGRVLNTWADIINRANLGMEVMHERNAHNFPLDLASTNSSSNN 352
>gb|AAC99848.1| (U28165) photosystem II core 32 kDa protein [Palmaria palmata]
Length = 360
Score = 669 bits (1707), Expect = 0.0
Identities = 318/360 (88%), Positives = 340/360 (94%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES +LW RFC WITSTENRLYIGWFGV+MIPTLLTATSVFIIAF+AAPPVDI
Sbjct: 1 MTATLERRESASLWERFCTWITSTENRLYIGWFGVVMIPTLLTATSVFIIAFVAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGAIIP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+LIVLHFL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAIIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGV CY+GREWELS+RLGMRPWI+VA++APVAAA AVFL+YPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVCCYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL AWPVVGIW T++ +STMA NLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGAWPVVGIWLTSMSVSTMALNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQSVVDSQGRVINTWADI+NRANLGMEVMHERNAHNFPLDLA A+ APSING
Sbjct: 301 NFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASGDSCPVALVAPSING 360
>gi|11465678 Photosystem II Q(b) protein (D1) [Porphyra purpurea]
sp|P51212|PSBA_PORPU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S73133 photosystem II protein D1 (psbA) - red alga (Porphyra purpurea)
chloroplast
gb|AAC08098.1| (U38804) Photosystem II Q(b) protein (D1) [Porphyra purpurea]
Length = 360
Score = 667 bits (1703), Expect = 0.0
Identities = 316/360 (87%), Positives = 340/360 (93%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA L+RRES +LW RFC+WITSTENRLYIGWFGVLMIPTLLTATSVFIIAF+AAPPVDI
Sbjct: 1 MTATLQRRESASLWERFCSWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFVAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGA+IP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+L+VLHFL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAVIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLVVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
GVACY+GREWELS+RLGMRPWI+VA++APVAAA AVFL+YPIGQGSFSDGMPLGISGTF
Sbjct: 121 TGVACYIGREWELSYRLGMRPWISVAFTAPVAAAAAVFLVYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSLIRET+ENESAN Y+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETSENESANYAYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL WPVVGIW TAL +STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGLWPVVGIWLTALSVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA A+ AP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLASGESLPVALTAPAVNG 360
>gi|11467381 D1 protein of the photosystem II reaction center core heterodimer
[Cyanophora paradoxa]
sp|P12719|PSBA_CYAPA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
gb|AAA81269.1| (U30821) D1 protein of the photosystem II reaction center core
heterodimer [Cyanophora paradoxa]
Length = 360
Score = 665 bits (1697), Expect = 0.0
Identities = 318/359 (88%), Positives = 338/359 (93%), Gaps = 7/359 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LER S +LW +FC +ITSTENRLYIGWFGVLM P LLTAT++FIIAF+AAPPVDI
Sbjct: 1 MTATLERNASVSLWEQFCGFITSTENRLYIGWFGVLMFPLLLTATTLFIIAFVAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSL YGNNIISGA+IP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+ +V+HFL
Sbjct: 61 DGIREPVAGSLFYGNNIISGAVIPSSAAIGMHFYPIWEAASLDEWLYNGGPYQFVVMHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFHM+GVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHMMGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA WPVVGIWFTALG+STMAFNLNG
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLALWPVVGIWFTALGLSTMAFNLNGL 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSIN 352
NFNQSVVDSQGRVI+TWADIINRANLGMEVMHERNAHNFPLDLA A+ APSIN
Sbjct: 301 NFNQSVVDSQGRVISTWADIINRANLGMEVMHERNAHNFPLDLASGEVMPVALTAPSIN 359
>sp|P04997|PSB2_SYNP7 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||B25362 photosystem II protein D1-II precursor - Synechococcus sp
emb|CAA28292.1| (X04617) Q(B) protein (AA 1-360) [Synechococcus PCC6301]
emb|CAA28293.1| (X04618) Q(B) protein (AA 1-360) [Synechococcus PCC6301]
Length = 360
Score = 665 bits (1697), Expect = 0.0
Identities = 313/360 (86%), Positives = 337/360 (92%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L+RRES +LW +FC W+TST+NRLY+GWFGVLMIPTLLTAT FI+AFIAAPPVDI
Sbjct: 1 MTTALQRRESASLWQQFCEWVTSTDNRLYVGWFGVLMIPTLLTATICFIVAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V HFL
Sbjct: 61 DGIREPVAGSLMYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+GV CYMGREWELS+RLGMRPWI VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 IGVFCYMGREWELSYRLGMRPWICVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG
Sbjct: 181 NFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFT+LGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTSLGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353
NFNQSV+DSQGRVINTWAD++NRANLGMEVMHERNAHNFPLDLAA E AP+ING
Sbjct: 301 NFNQSVLDSQGRVINTWADVLNRANLGMEVMHERNAHNFPLDLAAGEATPVALTAPAING 360
>sp|Q32389|PSBA_HETCA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
gb|AAA57555.1| (U18090) D1 protein [Heterosigma carterae]
Length = 360
Score = 664 bits (1694), Expect = 0.0
Identities = 318/360 (88%), Positives = 341/360 (94%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES +LW RFC+WITSTENRLYIGWFGVLMIPTLLTATS +IIAFIAAPPVDI
Sbjct: 1 MTATLERRESFSLWERFCSWITSTENRLYIGWFGVLMIPTLLTATSCYIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSL+YGNNII+GA+IP+S AIG+HFYPIWEAAS+DEWLYNGGPY+LIVLHFL
Sbjct: 61 DGIREPVAGSLMYGNNIITGAVIPSSNAIGVHFYPIWEAASLDEWLYNGGPYQLIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVA YMGREWELS+RLGMRPWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSLIRET+E ESAN GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEIESANYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIW TALG+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQSVVDSQGRVINTWADIINRA+LGMEVMHERNAHNFPLDLA AV AP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEVLPVAVNAPAVNG 360
>sp|P15191|PSBA_PROHO PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2MWD1 photosystem II protein D1 precursor - Prochlorothrix hollandica
emb|CAA32489.1| (X14308) D1 protein (AA 1 - 353) [Prochlorothrix hollandica]
emb|CAA32665.1| (X14523) PsbA I protein (AA 1-353) [Prochlorothrix hollandica]
prf||1503231A psbA gene [Prochlorothrix hollandica]
Length = 353
Score = 663 bits (1693), Expect = 0.0
Identities = 309/353 (87%), Positives = 335/353 (94%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L +RES N W +FC WI STENRLY+GWFGV+MIPTLLTAT FIIAFIAAPPVDI
Sbjct: 1 MTTALRQRESANAWEQFCQWIASTENRLYVGWFGVIMIPTLLTATICFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V HFL
Sbjct: 61 DGIREPVAGSLMYGNNIISGAVVPSSNAIGLHFYPIWEAASMDEWLYNGGPYQLVVFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ CYMGREWELS+RLGMRPWI VAYSAPVAAATAVFLIYP+GQGSFSDGMPLGISGTF
Sbjct: 121 IGIFCYMGREWELSYRLGMRPWICVAYSAPVAAATAVFLIYPLGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RET+ENES N GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETSENESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIWFT+LGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWFTSLGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
NFNQSV+DSQGRVI+TWADI+NRANLG EVMHERNAHNFPLDLAAV+APSI G
Sbjct: 301 NFNQSVMDSQGRVISTWADILNRANLGFEVMHERNAHNFPLDLAAVKAPSIIG 353
>sp|P31694|PSB2_ANASP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2AI17 photosystem II protein D1 precursor - Anabaena sp. (strain PCC
7120)
gb|AAA63703.1| (U21332) D1 form II [Anabaena sp.]
gb|AAA63704.1| (U21333) D1 form II [Anabaena sp.]
gb|AAA63705.1| (U21334) D1 form II [Anabaena sp.]
Length = 360
Score = 663 bits (1692), Expect = 0.0
Identities = 310/360 (86%), Positives = 337/360 (93%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA L++R+S N+W +FC WITST NRLYIGWFGVLMIPTLL AT+ FIIAFIAAPPVDI
Sbjct: 1 MTATLQQRKSANVWEQFCEWITSTNNRLYIGWFGVLMIPTLLAATTCFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL
Sbjct: 61 DGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
GV CY+GREWELS+RLGMRPWI +A+SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 TGVFCYLGREWELSYRLGMRPWICLAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTENES N GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTENESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR LHFFLAAWPV+GIWFTALG+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRQLHFFLAAWPVIGIWFTALGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQS++DSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA A+ AP+ING
Sbjct: 301 NFNQSIIDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAGEVAPVAISAPAING 360
>pir||F2KTD1 photosystem II protein D1 precursor - Cyanophora paradoxa cyanelle
emb|CAA32795.1| (X14667) psbA protein (AA 1-360) [Cyanophora paradoxa]
Length = 360
Score = 663 bits (1692), Expect = 0.0
Identities = 317/359 (88%), Positives = 337/359 (93%), Gaps = 7/359 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LER S +LW +FC +ITSTENRLYIGWFGVLM P LLTAT++FIIAF+AAPPVDI
Sbjct: 1 MTATLERNASVSLWEQFCGFITSTENRLYIGWFGVLMFPLLLTATTLFIIAFVAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSL YGNNIISGA+IP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+ +V+HFL
Sbjct: 61 DGIREPVAGSLFYGNNIISGAVIPSSAAIGMHFYPIWEAASLDEWLYNGGPYQFVVMHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFHM+GVAGVFGGSLFSAMHGSLVTSSLIRETTENES N GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHMMGVAGVFGGSLFSAMHGSLVTSSLIRETTENESLNAGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA WPVVGIWFTALG+STMAFNLNG
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLALWPVVGIWFTALGLSTMAFNLNGL 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSIN 352
NFNQSVVDSQGRVI+TWADIINRANLGMEVMHERNAHNFPLDLA A+ APSIN
Sbjct: 301 NFNQSVVDSQGRVISTWADIINRANLGMEVMHERNAHNFPLDLASGEVMPVALTAPSIN 359
>gi|11467479 PSII, D1 reaction-center protein [Odontella sinensis]
sp|P49460|PSBA_ODOSI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S78284 photosystem II protein D1 - Odontella sinensis chloroplast
emb|CAA91657.1| (Z67753) PSII, D1 reaction-center protein [Odontella sinensis]
Length = 360
Score = 663 bits (1691), Expect = 0.0
Identities = 316/360 (87%), Positives = 337/360 (92%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRE +LW RFC WITSTENRLYIGWFG LM PTLLTATS +IIAFIAAPPVDI
Sbjct: 1 MTATLERREGVSLWERFCAWITSTENRLYIGWFGCLMFPTLLTATSCYIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGA+IP+S AIG+HFYPIWEAAS+DEWLYNGGPY+LIVLHFL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAVIPSSNAIGMHFYPIWEAASIDEWLYNGGPYQLIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVA YMGREWELS+RLGMRPWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSLIRETTENES N GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIW TA+G+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTAMGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQSVVDSQGRVINTWADIINRA+LGMEVMHERNAHNFPLDLA A+ AP++NG
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLASGDVLPVALNAPAVNG 360
>sp|P24625|PSBA_ANTSP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S32577 photosystem II protein D1 precursor - red alga (Antithamnion sp.)
emb|CAA39049.1| (X55364) D1 protein [Antithamnion sp.]
Length = 360
Score = 660 bits (1684), Expect = 0.0
Identities = 313/360 (86%), Positives = 335/360 (92%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES +LW RFC WIT ENRLYIGWFGV+MIPTLLTATSVFIIA AAPPVDI
Sbjct: 1 MTATLERRESASLWARFCTWITMNENRLYIGWFGVVMIPTLLTATSVFIIACFAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGAIIP+SAAIG+HFYPIWEAAS+DEWLYNGGPY+LIVLHFL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAIIPSSAAIGIHFYPIWEAASLDEWLYNGGPYQLIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGV CY+GREWE S+RLGMRPWI+VA++APV AA+AVFL+YPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVCCYIGREWEFSYRLGMRPWISVAFTAPVVAASAVFLVYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHP H LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPLHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANNGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL WPVVGIWFT++ +STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGLWPVVGIWFTSMSVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQSVVDSQGRVINTWADI+NRANLGMEVMHERNAHNFPLDLA A+ AP+ING
Sbjct: 301 NFNQSVVDSQGRVINTWADILNRANLGMEVMHERNAHNFPLDLASNESLPLALVAPAING 360
>sp|P29270|PSBA_ANAAZ PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2AI1Z photosystem II protein D1 precursor - Anabaena azollae
emb|CAA45515.1| (X64174) D1 protein [Anabaena azollae]
Length = 360
Score = 659 bits (1683), Expect = 0.0
Identities = 307/360 (85%), Positives = 336/360 (93%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L++R + N+W RFC WITSTENR+YIGWFGVLMIPTL++A + F+IAFIAAPPVDI
Sbjct: 1 MTTTLQQRSTANVWDRFCEWITSTENRIYIGWFGVLMIPTLVSAIACFVIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+GVACY+GREWELS+RLGMRPWI VA+SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 IGVACYLGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQS++DSQGRVI TWAD+INRANLGMEVMHERNAHNFPLDLA A+ AP ING
Sbjct: 301 NFNQSIIDSQGRVIGTWADVINRANLGMEVMHERNAHNFPLDLAAGDVAPVALTAPPING 360
>sp|P35876|PSB1_SYNEN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
dbj|BAA03263.1| (D14325) D1 protein [Synechococcus elongatus]
Length = 360
Score = 659 bits (1682), Expect = 0.0
Identities = 309/360 (85%), Positives = 334/360 (91%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L+RRES NLW RFCNW+TST+NRLY+GWFGV+MIPTLL AT F+IAFIAAPPVDI
Sbjct: 1 MTTTLQRRESANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNII+GA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+LI+ HFL
Sbjct: 61 DGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LG +CYMGR+WELS+RLGMRPWI VAYSAP+A+A AVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGASCYMGRQWELSYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFH LGVAGVFGG+LF AMHGSLVTSSLIRETTE ESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVG+WFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGVWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353
NFN SV+D++G VINTWADIINRANLGMEVMHERNAHNFPLDLA+ E APSING
Sbjct: 301 NFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLASAESAPVAMIAPSING 360
>gb|AAF37850.1|AF227740_1 (AF227740) photosystem II subunit core 32 kD protein D1 [Vaucheria
litorea]
Length = 360
Score = 659 bits (1681), Expect = 0.0
Identities = 314/347 (90%), Positives = 334/347 (95%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES +LW RFC+WITST+NRLYIGWFGVLMIPTLLTAT+ +IIAFIAAPPVDI
Sbjct: 1 MTATLERRESISLWERFCSWITSTDNRLYIGWFGVLMIPTLLTATTCYIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGA+IP+S AIG+HFYPIWEAASVDEWLYNGGPY+LIVLHFL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPIWEAASVDEWLYNGGPYQLIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVA YMGREWELS+RLGMRPWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSLIRET+E ES N GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESTNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIW TALG+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347
NFNQSVVDSQGRVINTWADIINRA+LGMEVMHERNAHNFPLDLAA E
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLAAGE 347
>sp|P46242|PSB1_ANASP PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
gb|AAB59998.1| (U21331) D1 form I [Anabaena sp.]
Length = 360
Score = 659 bits (1681), Expect = 0.0
Identities = 307/360 (85%), Positives = 335/360 (92%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L++R S N+W RFC WITSTENR+Y+GWFGVLMIPTLL AT FIIAF+AAPPVDI
Sbjct: 1 MTTTLQQRSSANVWERFCTWITSTENRIYVGWFGVLMIPTLLAATVCFIIAFVAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL
Sbjct: 61 DGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G ACY+GR+WELS+RLGMRPWI VAYSAP+A+ATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 IGCACYLGRQWELSYRLGMRPWICVAYSAPLASATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEIESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR LHFFLAAWPV+GIWFTALG+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRQLHFFLAAWPVIGIWFTALGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353
NFNQS++DSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA E AP+ING
Sbjct: 301 NFNQSIIDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAGEVAPVALTAPAING 360
>pir||S26586 photosystem II protein D1 precursor - Synechococcus sp
emb|CAA78895.1| (Z16081) D1-protein [Synechococcus elongatus]
prf||2005436A photosystem II D-1 protein [Synechococcus elongatus]
Length = 360
Score = 658 bits (1679), Expect = 0.0
Identities = 308/360 (85%), Positives = 334/360 (92%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L+RRES NLW RFCNW+TST+NRLY+GWFGV+MIPTLL AT F+IAFIAAPPVDI
Sbjct: 1 MTTTLQRRESANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNII+GA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+LI+ HFL
Sbjct: 61 DGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LG +CYMGR+WEL++RLGMRPWI VAYSAP+A+A AVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGASCYMGRQWELTYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFH LGVAGVFGG+LF AMHGSLVTSSLIRETTE ESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVG+WFTALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGVWFTALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353
NFN SV+D++G VINTWADIINRANLGMEVMHERNAHNFPLDLA+ E APSING
Sbjct: 301 NFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLASAESAPVAMIAPSING 360
>sp|P07063|PSBA_FREDI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||A20978 photosystem II protein D1 precursor - Calothrix sp
gb|AAA24891.1| (K02074) photosystem II B protein (ps2B) [Fremyella diplosiphon]
prf||1006290A protein B photosystem II [Fremyella sp.]
Length = 360
Score = 656 bits (1675), Expect = 0.0
Identities = 307/360 (85%), Positives = 335/360 (92%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L++R ++W RFC WITSTENR+YIGWFGVLMIPTLL AT+ F+IAFIAAPPVDI
Sbjct: 1 MTTTLQQRSRASVWDRFCEWITSTENRIYIGWFGVLMIPTLLAATACFVIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL
Sbjct: 61 DGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LG ACY+GR+WELS+RLGMRPWI VAYSAP+A+ATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGCACYLGRQWELSYRLGMRPWICVAYSAPLASATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNIL+HPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG
Sbjct: 181 NFMIVFQAEHNILLHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALG+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353
NFNQSV+DSQGRVI TWAD+INRANLGMEVMHERNAHNFPLDLAA E AP+ING
Sbjct: 301 NFNQSVIDSQGRVIATWADVINRANLGMEVMHERNAHNFPLDLAAGEVAPVALTAPAING 360
>gi|11467647 PSII D1 reaction-center protein [Guillardia theta]
sp|O78446|PSBA_GUITH PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
gb|AAC35633.1| (AF041468) PSII D1 reaction-center protein [Guillardia theta]
Length = 360
Score = 655 bits (1672), Expect = 0.0
Identities = 309/348 (88%), Positives = 335/348 (95%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES +LW RFC+WITSTENRLYIGWFGVLMIPTLLTAT+VFIIAFIAAPPVDI
Sbjct: 1 MTATLERRESASLWERFCSWITSTENRLYIGWFGVLMIPTLLTATTVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNII+GA+IP+SA+IG+HFYPIWEAAS+DEWLYNGGPY+LIV HFL
Sbjct: 61 DGIREPVAGSLLYGNNIITGAVIPSSASIGIHFYPIWEAASLDEWLYNGGPYQLIVDHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGV ++GREWE S+RLGMRPWI+VA++APVAAA+AVFL+YPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVCGWIGREWEFSYRLGMRPWISVAFTAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFH LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESAN GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHQLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL WPVVGIWFTALGI TMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVVGIWFTALGIMTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEA 348
NFNQSVVDSQGRVINTWADI+NRANLG+EVMHERNAHNFPLDLA+ E+
Sbjct: 301 NFNQSVVDSQGRVINTWADILNRANLGIEVMHERNAHNFPLDLASGES 348
>gi|11465541 unknown; Photosystem II Q(b) protein (D1) [Cyanidium caldarium]
pir||T11963 Photosystem II Q(b) protein (D1) - red alga (Cyanidium caldarium)
chloroplast
gb|AAB82694.1| (AF022186) unknown; Photosystem II Q(b) protein (D1) [Cyanidium
caldarium]
Length = 360
Score = 655 bits (1672), Expect = 0.0
Identities = 313/359 (87%), Positives = 333/359 (92%), Gaps = 7/359 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT LERRES +LW RFC+WITSTENRLYIGWFGVLMIP LLTAT+VFIIAFIAAPPVDI
Sbjct: 1 MTVTLERRESTSLWERFCSWITSTENRLYIGWFGVLMIPCLLTATTVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNII+GA++PTS AIGLH YPIWEAAS+DEWLYNGGPY+L+VLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIITGAVVPTSNAIGLHLYPIWEAASLDEWLYNGGPYQLVVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVA YMGREWELS+RLGMRPWI VA+SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVAAYMGREWELSYRLGMRPWICVAFSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFHM GVAGVFGG+LFSAMHGSLVTSSLIRETTENES N GY+ G
Sbjct: 181 NFMLVFQAEHNILMHPFHMAGVAGVFGGALFSAMHGSLVTSSLIRETTENESPNYGYKLG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL WPVVGIW T++GISTMAFNLNG
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGLWPVVGIWLTSIGISTMAFNLNGL 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSIN 352
NFNQS+VDSQGRVINTWADIINRANLG+EVMHERNAHNFPLDLA A +PSIN
Sbjct: 301 NFNQSIVDSQGRVINTWADIINRANLGIEVMHERNAHNFPLDLADNSLLPVASSSPSIN 359
>sp|P48265|PSBA_BUMFI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
emb|CAA55807.1| (X79223) D1 subunit of photosystem II [Bumilleriopsis filiformis]
Length = 360
Score = 655 bits (1672), Expect = 0.0
Identities = 312/347 (89%), Positives = 333/347 (95%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERRES +LW RFC+WITSTENRLYIGWFGVLMIPTLLTAT+ +IIAFIAAPPVDI
Sbjct: 1 MTATLERRESISLWERFCSWITSTENRLYIGWFGVLMIPTLLTATTCYIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGA+IP+S AIG+HFYP+WEAASVDEWLYNGGPY+LIVLHFL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAVIPSSNAIGVHFYPVWEAASVDEWLYNGGPYQLIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGVA YMGREWELS+RLGMRPWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVASYMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMHGSLVTSSLIRET+E ES N GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESTNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVV IW TALG++TMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVRIWLTALGVTTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE 347
NFNQSVVDSQGRVINTWADIINRA+LGMEVMHERNAHNFPLDLAA E
Sbjct: 301 NFNQSVVDSQGRVINTWADIINRADLGMEVMHERNAHNFPLDLAAGE 347
>sp|P51765|PSB1_SYNVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S45009 photosystem II protein D1 precursor - Synechococcus sp
emb|CAA55806.1| (X79222) D1 subunit of photosystem II [Synechococcus vulcanus]
Length = 360
Score = 654 bits (1668), Expect = 0.0
Identities = 307/360 (85%), Positives = 332/360 (91%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L+RRES NLW RFCNW+TST+NRLY+GWFGV+MIPTLL AT F+IAFIAAPPVDI
Sbjct: 1 MTTTLQRRESANLWERFCNWVTSTDNRLYVGWFGVIMIPTLLAATICFVIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNII+GA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+LI+ HFL
Sbjct: 61 DGIREPVSGSLLYGNNIITGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLIIFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LG +CYMGR+WELS+RLGMRPWI VAYSAP+A+A AVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGASCYMGRQWELSYRLGMRPWICVAYSAPLASAFAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFH LGVAGVFGG+LF AMHGSLVTSSLIRETTE ESAN GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHQLGVAGVFGGALFCAMHGSLVTSSLIRETTETESANYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAW VVG+WF ALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWRVVGVWFAALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353
NFN SV+D++G VINTWADIINRANLGMEVMHERNAHNFPLDLA+ E APSING
Sbjct: 301 NFNHSVIDAKGNVINTWADIINRANLGMEVMHERNAHNFPLDLASAESAPVAMIAPSING 360
>sp|P04996|PSB1_SYNP7 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||A25362 photosystem II protein D1-I precursor - Synechococcus sp
emb|CAA28291.1| (X04616) Q(B) protein (AA 1-360) [Synechococcus PCC6301]
gb|AAA22055.1| (M11557) thylakoid membrane protein (psbA) [Synechococcus sp. PCC
6301]
Length = 360
Score = 653 bits (1667), Expect = 0.0
Identities = 303/360 (84%), Positives = 335/360 (92%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT+IL + +N+W RFC W+TST+NR+Y+GWFGVLMIPTLLTAT FI+AFIAAPPVDI
Sbjct: 1 MTSILREQRRDNVWDRFCEWVTSTDNRIYVGWFGVLMIPTLLTATICFIVAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V HFL
Sbjct: 61 DGIREPVAGSLMYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LG++CYMGR+WELS+RLGMRPWI VAYSAP++AA AVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGISCYMGRQWELSYRLGMRPWICVAYSAPLSAAFAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG
Sbjct: 181 NFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTETESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL AWPVVGIWFT++GISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVVGIWFTSMGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSING 353
NFNQSV+DSQG+VINTWAD++NRANLGMEVMHERNAHNFPLDLAA E APSI+G
Sbjct: 301 NFNQSVLDSQGKVINTWADVLNRANLGMEVMHERNAHNFPLDLAAGEATPVALTAPSIHG 360
>sp|P16033|PSB2_SYNY3 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2YB16 photosystem II protein D1.II precursor - Synechocystis sp. (strain
PCC 6803)
emb|CAA31899.1| (X13547) D1 protein (AA 1 - 360) [Synechocystis PCC6803]
emb|CAA39472.1| (X56000) D1 polypeptide [Synechocystis PCC6803]
dbj|BAA16586.1| (D90899) photosystem II D1 protein [Synechocystis sp.]
dbj|BAA18230.1| (D90912) photosystem II D1 protein [Synechocystis sp.]
Length = 360
Score = 652 bits (1663), Expect = 0.0
Identities = 301/360 (83%), Positives = 334/360 (92%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L++RES +LW +FC W+TST NR+Y+GWFG LMIPTLLTAT+ FIIAFIAAPPVDI
Sbjct: 1 MTTTLQQRESASLWEQFCQWVTSTNNRIYVGWFGTLMIPTLLTATTCFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V HFL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ CYMGR+WELS+RLGMRPWI VAYSAPV+AATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 IGIFCYMGRQWELSYRLGMRPWICVAYSAPVSAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEVESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL AWPV+GIWFTA+G+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQS++DSQGRVI TWAD++NRAN+G EVMHERNAHNFPLDLA A+ AP++NG
Sbjct: 301 NFNQSILDSQGRVIGTWADVLNRANIGFEVMHERNAHNFPLDLASGEQAPVALTAPAVNG 360
>sp|P51764|PSB2_MICAE PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
dbj|BAA12284.1| (D84228) D1 protein [Microcystis aeruginosa]
Length = 360
Score = 651 bits (1662), Expect = 0.0
Identities = 303/360 (84%), Positives = 333/360 (92%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L++RES +LW +FC WITST NRLY+GWFGV+MIPTLLTAT+ FIIAFIAAPPVDI
Sbjct: 1 MTTTLQQRESASLWEQFCQWITSTNNRLYVGWFGVIMIPTLLTATTCFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
LGV CY+GR+WELSFRLGMRPWI VAYSAPV+AATAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 LGVFCYLGRQWELSFRLGMRPWICVAYSAPVSAATAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG
Sbjct: 181 NFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEIESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL AWPV+GIWFTA+G+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQS++DSQGRVI TW D++NRA +GMEVMHERNAHNFPLDLA A+ AP+ING
Sbjct: 301 NFNQSILDSQGRVIGTWVDVLNRAGIGMEVMHERNAHNFPLDLASGEQAPVALTAPAING 360
>gb|AAA84445.1| (K01200) psbA gene product [Amaranthus hybridus]
prf||1001242A protein psbA [Amaranthus hybridus]
Length = 317
Score = 648 bits (1653), Expect = 0.0
Identities = 314/317 (99%), Positives = 316/317 (99%)
Query: 37 MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 96
MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI
Sbjct: 1 MIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPI 60
Query: 97 WEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA 156
WEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA
Sbjct: 61 WEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA 120
Query: 157 VFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHG 216
VFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHG
Sbjct: 121 VFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHG 180
Query: 217 SLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA 276
SLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA
Sbjct: 181 SLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA 240
Query: 277 AWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNA 336
AWPV+GIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNA
Sbjct: 241 AWPVIGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNA 300
Query: 337 HNFPLDLAAVEAPSING 353
HNFPLDLAA+EAPS NG
Sbjct: 301 HNFPLDLAAIEAPSTNG 317
>sp|P51759|PSBA_CYAA5 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
gb|AAD09838.1| (U39610) D1 [Cyanothece sp. ATCC 51142]
Length = 356
Score = 647 bits (1651), Expect = 0.0
Identities = 297/356 (83%), Positives = 331/356 (92%), Gaps = 3/356 (0%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L++RES +LW +FC W+TST NR+Y+GWFG LMIPTLLTAT+ FIIAFIAAPPVDI
Sbjct: 1 MTTTLQQRESVSLWEQFCQWVTSTNNRIYVGWFGTLMIPTLLTATTCFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNI+SGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL
Sbjct: 61 DGIREPVAGSLLYGNNIVSGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVIFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ CYMGR+WELS+RLGMRPWI VAYSAPV+A TAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 IGIFCYMGRQWELSYRLGMRPWICVAYSAPVSARTAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG
Sbjct: 181 NFMFVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEIESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL AWPV+GIWFTA+G+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLGAWPVIGIWFTAMGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE---APSING 353
NFNQS++DSQGRVI TWAD++NRA +GMEVMHERNAHNFPLDLA+ E AP ING
Sbjct: 301 NFNQSILDSQGRVIGTWADVLNRAGIGMEVMHERNAHNFPLDLASAEPVSAPVING 356
>sp|P14660|PSBA_SYNY4 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2YB17 photosystem II protein D1 precursor - Synechocystis sp. (strain
PCC 6714)
emb|CAA33538.1| (X15514) psbAI product (AA 1-360) [Synechocystis PCC6714]
Length = 360
Score = 647 bits (1651), Expect = 0.0
Identities = 300/360 (83%), Positives = 332/360 (91%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L++RES +LW +FC W+TST NR+Y+GWFG LMIPTLLTAT+ FIIAFIAAPPVDI
Sbjct: 1 MTTTLQQRESASLWEQFCQWVTSTNNRIYVGWFGTLMIPTLLTATTCFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V FL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFQFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ CYMGR+WELS+RLGMRPWI VAYSAPV+A TAVFLIYPIGQGSFSDGMPLGISGTF
Sbjct: 121 IGIFCYMGRQWELSYRLGMRPWICVAYSAPVSARTAVFLIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTE ES N GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLVRETTEVESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL AWPV+GIWFTA+G+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTAMGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQS++DSQGRVI TWAD++NRAN+G EVMHERNAHNFPLDLA A+ AP+ING
Sbjct: 301 NFNQSILDSQGRVIGTWADVLNRANIGFEVMHERNAHNFPLDLASGEQAPVALTAPAING 360
>gb|AAD40182.1|AF156980_1 (AF156980) photosystem II D1 protein [Synechococcus sp. WH7803]
Length = 359
Score = 646 bits (1648), Expect = 0.0
Identities = 294/351 (83%), Positives = 327/351 (92%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT +++R W FC W+TST NRLY+GWFGVLMIPTLL AT+ FI+AFIAAPPVDI
Sbjct: 1 MTTTIQQRSGAGGWQSFCEWVTSTNNRLYVGWFGVLMIPTLLAATTCFIVAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSL+YGNNIISGA++P+S AIGLHFYPIWEAAS+DEWLYNGGPY+L+V HFL
Sbjct: 61 DGIREPVAGSLIYGNNIISGAVVPSSNAIGLHFYPIWEAASLDEWLYNGGPYQLVVFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ CYMGREWELS+RLGMRPWI VAYSAPVAAA+AVFL+YP GQGSFSDGMPLGISGTF
Sbjct: 121 IGIFCYMGREWELSYRLGMRPWICVAYSAPVAAASAVFLVYPFGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFHM+GVAGVFGGSLFSAMHGSLVTSSL+RETTE+ES N GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHMMGVAGVFGGSLFSAMHGSLVTSSLVRETTESESQNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALG+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSI 351
NFNQS++D QGRV+NTWAD++NRANLGMEVMHERNAHNFPLDLAA E+ +
Sbjct: 301 NFNQSILDGQGRVLNTWADVLNRANLGMEVMHERNAHNFPLDLAAAESTPV 351
>sp|P24725|PSBA_CYACA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||A48306 photosystem II protein D1 precursor - red alga (Cyanidium
caldarium) chloroplast
emb|CAA36969.1| (X52758) photosystem II associated D1 protein [Cyanidium caldarium]
Length = 360
Score = 646 bits (1648), Expect = 0.0
Identities = 307/345 (88%), Positives = 327/345 (93%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTA LERR++ +LW RFC+WITSTENRLYIGWFGVLMIPTLLTATSVFII FIAAPPVDI
Sbjct: 1 MTATLERRQTASLWERFCSWITSTENRLYIGWFGVLMIPTLLTATSVFIIGFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREP SLLYGNNII+GAI+PTS AIG+HFYPIWEAAS+DEWLYNGGPYELIVLHF
Sbjct: 61 DGIREPGFRSLLYGNNIITGAIVPTSNAIGIHFYPIWEAASLDEWLYNGGPYELIVLHFF 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ YMGREWELS+RLGMRPWIAVA+SAPVAAATAVF+IYPIGQGSFSDGMPLGISGTF
Sbjct: 121 IGICAYMGREWELSYRLGMRPWIAVAFSAPVAAATAVFIIYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFHM+GVAGVFGGSLFSAMHGSLVTSSLIRE TENESAN GY+FG
Sbjct: 181 NFMLVFQAEHNILMHPFHMMGVAGVFGGSLFSAMHGSLVTSSLIRERTENESANNGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QE ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA WPVV I TALG+STMAFNLNGF
Sbjct: 241 QEYETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLALWPVVCICVTALGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 345
NFNQSVVDSQGRVINTWADI+NRANLG+EVMHERNAHNFPLDLA+
Sbjct: 301 NFNQSVVDSQGRVINTWADILNRANLGIEVMHERNAHNFPLDLAS 345
>sp|P24726|PSBA_ECTSI PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S32576 photosystem II protein D1 precursor - brown alga (Ectocarpus
siliculosus)
emb|CAA40023.1| (X56695) D1 [Ectocarpus siliculosus]
Length = 360
Score = 645 bits (1645), Expect = 0.0
Identities = 308/360 (85%), Positives = 331/360 (91%), Gaps = 7/360 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
M A LERRE + WG F WITSTENRLYIGWFG LMIPTLLTA S +IIAFIAAPPVDI
Sbjct: 1 MVATLERREEKRDWGTFATWITSTENRLYIGWFGCLMIPTLLTAASCYIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPV+GSLLYGNNIISGA+IP+S AIG+HFYPIWEAAS++EWLYNGGPY+LIV HFL
Sbjct: 61 DGIREPVAGSLLYGNNIISGAVIPSSNAIGIHFYPIWEAASIEEWLYNGGPYQLIVFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+GVAC+MGREWELS+RLGMRPWI VA+SAPVAAA+AVFL+YPIGQGSFSDGMPLGISGTF
Sbjct: 121 IGVACWMGREWELSYRLGMRPWIFVAFSAPVAAASAVFLVYPIGQGSFSDGMPLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILM PFHM GVAGVFGGSLFSAMHGSLVTSSLIRET+E ES N GY+FG
Sbjct: 181 NFMIVFQAEHNILMRPFHMAGVAGVFGGSLFSAMHGSLVTSSLIRETSEVESVNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFLAAWPVVGIW TALG+STMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFLAAWPVVGIWLTALGVSTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQSVVDS+GRVINTWADIINRA+LGMEVMHERNAHNFPLDLA A+ APS+ G
Sbjct: 301 NFNQSVVDSEGRVINTWADIINRADLGMEVMHERNAHNFPLDLASNEILPVAISAPSVVG 360
>sp|P35877|PSB2_SYNEN PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
dbj|BAA03264.1| (D14325) D1 protein [Synechococcus elongatus]
Length = 360
Score = 642 bits (1639), Expect = 0.0
Identities = 303/358 (84%), Positives = 330/358 (91%), Gaps = 7/358 (1%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT +L+RR++ NLW RFC+WITSTENRLYIGWFGV+MIPTLL AT F+IAFIAAPPVDI
Sbjct: 1 MTTVLQRRQTANLWERFCDWITSTENRLYIGWFGVIMIPTLLAATICFVIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNII+ A++P+S AIGLH YPIW+AAS+DEWLYNGGPY+LI+ HFL
Sbjct: 61 DGIREPVSGSLLYGNNIITAAVVPSSNAIGLHLYPIWDAASLDEWLYNGGPYQLIIFHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ CYMGREWELS+RLGMRPWI VA+SAPVAAATAV LIYPIGQGSFSDG+ LGISGTF
Sbjct: 121 IGIFCYMGREWELSYRLGMRPWIPVAFSAPVAAATAVLLIYPIGQGSFSDGLMLGISGTF 180
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGG+LF+AMHGSLVTSSLIRETTE ES N GY+FG
Sbjct: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGALFAAMHGSLVTSSLIRETTETESTNYGYKFG 240
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF ALGISTMAFNLNGF
Sbjct: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFAALGISTMAFNLNGF 300
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVE-------APSI 351
NFN SVVD+QG VINTWADIINRAN+G+EVMHERNAHNFPLDLA+ E APSI
Sbjct: 301 NFNHSVVDAQGNVINTWADIINRANIGIEVMHERNAHNFPLDLASGELAPVAMIAPSI 358
>gi|11466988 PSII D1-polypeptide [Euglena gracilis]
sp|P06631|PSBA_EUGGR PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S34503 photosystem II protein D1 - Euglena gracilis chloroplast
emb|CAA25319.1| (X00735) 32 kd protein [Euglena gracilis]
emb|CAA50082.1| (X70810) PSII D1-polypeptide [Euglena gracilis]
Length = 345
Score = 641 bits (1635), Expect = 0.0
Identities = 297/344 (86%), Positives = 323/344 (93%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
++ +L++ +LW RFC W+ S +NRLY+GWFGVLMIPTLLTA +VFIIAFIAAPPVDI
Sbjct: 2 ISPVLKKYARPSLWYRFCAWVASKKNRLYVGWFGVLMIPTLLTAATVFIIAFIAAPPVDI 61
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSL YGNNII+GA++PTS AIGLHFYPIWEA S+DEWLYNGGPY+LIV HF
Sbjct: 62 DGIREPVSGSLFYGNNIITGAVVPTSNAIGLHFYPIWEATSLDEWLYNGGPYQLIVCHFF 121
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ YMGREWELSFRLGMRPWIAVAYSAPVAAA+AVF++YP+GQGSFSDGMPLGISGTF
Sbjct: 122 IGICSYMGREWELSFRLGMRPWIAVAYSAPVAAASAVFIVYPLGQGSFSDGMPLGISGTF 181
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTENES N GY+FG
Sbjct: 182 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLLRETTENESINVGYKFG 241
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNI+AAH YFGRLIFQYASFNNSRSLHFFLA WPVVGIWFTALG+STMAFNLNGF
Sbjct: 242 QEEETYNIIAAHAYFGRLIFQYASFNNSRSLHFFLAVWPVVGIWFTALGVSTMAFNLNGF 301
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 344
NFNQSV+DSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA
Sbjct: 302 NFNQSVIDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 345
>emb|CAA25447.1| (X00929) 32-Kda thylakoid membrane protein [Euglena gracilis]
prf||1010249A protein,thylakoid membrane [Euglena gracilis]
Length = 345
Score = 640 bits (1633), Expect = 0.0
Identities = 296/344 (86%), Positives = 323/344 (93%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
++ +L++ +LW RFC W+ S +NRLY+GWFGVLMIPTLLTA +VFIIAFIAAPPVDI
Sbjct: 2 ISPVLKKYARPSLWYRFCAWVASKKNRLYVGWFGVLMIPTLLTAATVFIIAFIAAPPVDI 61
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSL YGNNI++GA++PTS AIGLHFYPIWEA S+DEWLYNGGPY+LIV HF
Sbjct: 62 DGIREPVSGSLFYGNNILTGAVVPTSNAIGLHFYPIWEATSLDEWLYNGGPYQLIVCHFF 121
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ YMGREWELSFRLGMRPWIAVAYSAPVAAA+AVF++YP+GQGSFSDGMPLGISGTF
Sbjct: 122 IGICSYMGREWELSFRLGMRPWIAVAYSAPVAAASAVFIVYPLGQGSFSDGMPLGISGTF 181
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSL+RETTENES N GY+FG
Sbjct: 182 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLLRETTENESINVGYKFG 241
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QEEETYNI+AAH YFGRLIFQYASFNNSRSLHFFLA WPVVGIWFTALG+STMAFNLNGF
Sbjct: 242 QEEETYNIIAAHAYFGRLIFQYASFNNSRSLHFFLAVWPVVGIWFTALGVSTMAFNLNGF 301
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 344
NFNQSV+DSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA
Sbjct: 302 NFNQSVIDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 345
>gb|AAD51002.1|AF170924_1 (AF170924) photosystem II D1 protein [Mastigocladus laminosus]
Length = 358
Score = 636 bits (1623), Expect = 0.0
Identities = 299/360 (83%), Positives = 331/360 (91%), Gaps = 9/360 (2%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L R E+ +LW RFC+WITST NR+Y+GWFGVLMIPTLL AT F+IAFIAAPPVDI
Sbjct: 1 MTTTLRRGETGSLWDRFCDWITSTNNRIYVGWFGVLMIPTLLAATICFVIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNII+GA++PTS AIGLHFYPIWEA +DEWLYNGGPYELIV HFL
Sbjct: 61 DGIREPVSGSLLYGNNIITGAVVPTSNAIGLHFYPIWEA--LDEWLYNGGPYELIVFHFL 118
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTF 180
+G+ C++GR+WELS+RLGMRPWI VAYSAPVAAAT+VFLIYPIGQGSFSDGMPLGI+GTF
Sbjct: 119 IGIFCWLGRQWELSYRLGMRPWICVAYSAPVAAATSVFLIYPIGQGSFSDGMPLGITGTF 178
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFH LGVAGVFGGSLF AMHGSLVTSSL+RETTE ES N GY+FG
Sbjct: 179 NFMLVFQAEHNILMHPFHQLGVAGVFGGSLFCAMHGSLVTSSLVRETTETESQNYGYKFG 238
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QE+ETY+IVAAHGYFGRLI+QYASFNNSRSLHFFLAAWPVV IWFTALGISTMAFNLNGF
Sbjct: 239 QEQETYSIVAAHGYFGRLIWQYASFNNSRSLHFFLAAWPVVCIWFTALGISTMAFNLNGF 298
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
NFNQS++DSQGRV+NTWADI+NRANLGMEVMHERNAHNFPLDLA A+++P+ING
Sbjct: 299 NFNQSILDSQGRVVNTWADILNRANLGMEVMHERNAHNFPLDLAAGEVLPIALQSPAING 358
>sp|P07826|PSB1_SYNY3 PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||F2YB13 photosystem II protein D1 precursor - Synechocystis sp. (strain
PCC 6803)
dbj|BAA18829.1| (D90917) photosystem II D1 protein [Synechocystis sp.]
Length = 360
Score = 612 bits (1561), Expect = e-174
Identities = 282/352 (80%), Positives = 317/352 (89%), Gaps = 7/352 (1%)
Query: 9 ESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVS 68
+ ++LW RFC WITST NRLYIGWFGVLMIPTLLTAT+ FIIAFIAAPPVDIDGIREP++
Sbjct: 9 QEQSLWSRFCCWITSTSNRLYIGWFGVLMIPTLLTATTCFIIAFIAAPPVDIDGIREPIA 68
Query: 69 GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMG 128
GSLLYGNNII+ A++P+S AIGLHFYPIWEA S+DEWLYNGGPY+LIV HFL+G+ CY+G
Sbjct: 69 GSLLYGNNIITAAVVPSSNAIGLHFYPIWEAHSLDEWLYNGGPYQLIVFHFLIGIFCYLG 128
Query: 129 REWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQA 188
R+WELS+RLGMRPWI VAYSAPVAAATA LIY IGQGSFSDG+PLGISGTFNFM+V QA
Sbjct: 129 RQWELSYRLGMRPWICVAYSAPVAAATATLLIYSIGQGSFSDGLPLGISGTFNFMLVLQA 188
Query: 189 EHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNI 248
EHN+LMHPFHMLGVAGVFGG+LF+AMHGSLVTSSLIRETTE ES N+GY+FGQEEETYNI
Sbjct: 189 EHNVLMHPFHMLGVAGVFGGALFAAMHGSLVTSSLIRETTEVESQNQGYKFGQEEETYNI 248
Query: 249 VAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVD 308
VAAHGYFGRLIFQYASFNNSR+LHFFL AWPVVGIWF AL + AFNLNGFNFNQS++D
Sbjct: 249 VAAHGYFGRLIFQYASFNNSRALHFFLGAWPVVGIWFAALAVCCFAFNLNGFNFNQSILD 308
Query: 309 SQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
+QGR ++TWAD+INRAN+G EVMHERN HNFPLDLA A+ AP+I G
Sbjct: 309 AQGRPVSTWADVINRANIGFEVMHERNVHNFPLDLASGDAQMVALNAPAIEG 360
>gb|AAD34735.1| (AF131887) photosystem Q (B) protein precursor [Poa annua]
Length = 296
Score = 610 bits (1556), Expect = e-174
Identities = 295/296 (99%), Positives = 296/296 (99%)
Query: 46 SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW 105
SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW
Sbjct: 1 SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW 60
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ
Sbjct: 61 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 120
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIR 225
GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIR
Sbjct: 121 GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIR 180
Query: 226 ETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 285
ETTENESANEGY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF
Sbjct: 181 ETTENESANEGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 240
Query: 286 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL 341
TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL
Sbjct: 241 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL 296
>gb|AAD34734.1| (AF131886) mutant photosystem Q (B) protein precursor [Poa annua]
Length = 296
Score = 610 bits (1555), Expect = e-173
Identities = 294/296 (99%), Positives = 296/296 (99%)
Query: 46 SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW 105
SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW
Sbjct: 1 SVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEW 60
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ
Sbjct: 61 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 120
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIR 225
GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSL+TSSLIR
Sbjct: 121 GSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLITSSLIR 180
Query: 226 ETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 285
ETTENESANEGY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF
Sbjct: 181 ETTENESANEGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 240
Query: 286 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL 341
TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL
Sbjct: 241 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPL 296
>emb|CAA68778.1| (Y00885) D1 protein (AA 1-360) [Synechocystis PCC6803]
Length = 360
Score = 604 bits (1540), Expect = e-172
Identities = 279/352 (79%), Positives = 314/352 (88%), Gaps = 7/352 (1%)
Query: 9 ESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVS 68
+ ++LW RFC WITST NRLYIGWFGVLMIPTLLTAT+ FIIAFIAAPPVDIDGIREP++
Sbjct: 9 QEQSLWSRFCCWITSTSNRLYIGWFGVLMIPTLLTATTCFIIAFIAAPPVDIDGIREPIA 68
Query: 69 GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMG 128
GSLLYGNNII+ A++P+S AI LHFYPIWEA S+DEWLYNGGPY+L V HFL+G+ CY+G
Sbjct: 69 GSLLYGNNIITAAVVPSSNAIALHFYPIWEAHSLDEWLYNGGPYQLNVFHFLIGIFCYLG 128
Query: 129 REWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQA 188
R+WELS+RLGMRPWI VAYSAPVAAATA LIY IGQGSFSDG+PLGISGTFNFM+V QA
Sbjct: 129 RQWELSYRLGMRPWICVAYSAPVAAATATLLIYSIGQGSFSDGLPLGISGTFNFMLVLQA 188
Query: 189 EHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNI 248
EHN+LMHPFHMLGVAGVFGG+LF+AMHGSLVTSSLIRETTE ES N+GY+FGQEEETYNI
Sbjct: 189 EHNVLMHPFHMLGVAGVFGGALFAAMHGSLVTSSLIRETTEVESQNQGYKFGQEEETYNI 248
Query: 249 VAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVD 308
VAAHGYFGRLIFQYASFNNSR+LH FL AWPVVGIWF AL + AFNLNGFNFNQS++D
Sbjct: 249 VAAHGYFGRLIFQYASFNNSRALHSFLGAWPVVGIWFAALAVCCFAFNLNGFNFNQSILD 308
Query: 309 SQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA-------AVEAPSING 353
+QGR ++TWAD+INRAN+G EVMHERN HNFPLDLA A+ AP+I G
Sbjct: 309 AQGRPVSTWADVINRANIGFEVMHERNVHNFPLDLASGDAQMVALNAPAIEG 360
>gb|AAB61275.1| (U96631) D1 protein, photosystem II [Acorus gramineus]
Length = 309
Score = 601 bits (1534), Expect = e-171
Identities = 291/309 (94%), Positives = 291/309 (94%)
Query: 32 WFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGL 91
WFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGL
Sbjct: 1 WFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGL 60
Query: 92 HFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPV 151
HFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA
Sbjct: 61 HFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAXXXXXXX 120
Query: 152 AAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLF 211
FLIYPIGQGSFSDGMPLGISGT NFMIVFQAEHNI MHPFHMLGVAGVFGGSLF
Sbjct: 121 XXXXXXFLIYPIGQGSFSDGMPLGISGTXNFMIVFQAEHNIXMHPFHMLGVAGVFGGSLF 180
Query: 212 SAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL 271
SAMHGSLVTSSLIRETTEN SANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL
Sbjct: 181 SAMHGSLVTSSLIRETTENXSANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL 240
Query: 272 HFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVM 331
HFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVI TWAD INRANLGMEVM
Sbjct: 241 HFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVIXTWADXINRANLGMEVM 300
Query: 332 HERNAHNFP 340
HERNAHNFP
Sbjct: 301 HERNAHNFP 309
>sp|P46895|PSBA_PROMA PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S54256 photosystem II protein D1 - Prochlorococcus marinus
emb|CAA89062.1| (Z49201) D1 protein of photosystem II [Prochlorococcus marinus]
Length = 360
Score = 600 bits (1530), Expect = e-171
Identities = 277/352 (78%), Positives = 315/352 (88%), Gaps = 1/352 (0%)
Query: 1 MTAILERRESE-NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVD 59
MT I ++R S W +FC W+TST+NR+Y+GWFGVLMIP LL A F++AFIAAPPVD
Sbjct: 1 MTTIRQQRSSLLKGWPQFCEWVTSTDNRIYVGWFGVLMIPCLLAAAICFVVAFIAAPPVD 60
Query: 60 IDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHF 119
IDGIREPV+GS LYGNNIISGA++P+S AIGLHFYPIWEAA++DEWL NGGPY+L++ HF
Sbjct: 61 IDGIREPVAGSFLYGNNIISGAVVPSSNAIGLHFYPIWEAATLDEWLNNGGPYQLVIFHF 120
Query: 120 LLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGT 179
L+G+ +MGR+WELS+RLGMRPWI VAYSAPV+AA AVFL+YP GQGSFSDGMPLGISGT
Sbjct: 121 LIGICGWMGRQWELSYRLGMRPWICVAYSAPVSAAFAVFLVYPFGQGSFSDGMPLGISGT 180
Query: 180 FNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRF 239
FNFM VFQAEHNILMHPFHM GVAG+FGGSLFSAMHGSLVTSSLIRETTE ES N GY+F
Sbjct: 181 FNFMFVFQAEHNILMHPFHMAGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKF 240
Query: 240 GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNG 299
GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLA +PVV +W T++GI TMAFNLNG
Sbjct: 241 GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAIFPVVCVWLTSMGICTMAFNLNG 300
Query: 300 FNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSI 351
FNFNQSVVD+ G+V+ TW D++NRANLGMEVMHERNAHNFPLDLAA E+ S+
Sbjct: 301 FNFNQSVVDANGKVVPTWGDVLNRANLGMEVMHERNAHNFPLDLAAAESTSV 352
>dbj|BAA86296.1| (AB027234) photosystem II core 32 kDa protein [Gymnodinium
mikimotoi]
Length = 360
Score = 590 bits (1504), Expect = e-167
Identities = 270/331 (81%), Positives = 302/331 (90%)
Query: 14 WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 73
W FC+W+T+TENRLY+GWFG LM+PTL++AT +II F+AAPPVDIDGIREPVSGSLLY
Sbjct: 17 WEFFCSWVTTTENRLYLGWFGCLMVPTLVSATFAYIIGFLAAPPVDIDGIREPVSGSLLY 76
Query: 74 GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 133
NNIISGA+IP+S A+G+HFYPIWEAAS+DEWLYNGG Y+L+V HF +GV Y+GREWEL
Sbjct: 77 ANNIISGAVIPSSNAMGVHFYPIWEAASLDEWLYNGGTYQLVVFHFFIGVCSYLGREWEL 136
Query: 134 SFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 193
S+RLGMRPWI VA+SAPVAAA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNIL
Sbjct: 137 SYRLGMRPWIFVAFSAPVAAASAVFIVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNIL 196
Query: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHG 253
MHP HM GVA VFGGSLFSAMHGSLVTSSL++ET E ESAN GYRFGQ ETYNIVAAHG
Sbjct: 197 MHPLHMFGVAAVFGGSLFSAMHGSLVTSSLLKETAEFESANYGYRFGQSTETYNIVAAHG 256
Query: 254 YFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRV 313
YFGRLIFQYASFNNSRSLHFFL AWPVVGIW TA+G+STMAFNLNG NF QS++D+ G
Sbjct: 257 YFGRLIFQYASFNNSRSLHFFLGAWPVVGIWLTAMGVSTMAFNLNGLNFQQSILDASGCP 316
Query: 314 INTWADIINRANLGMEVMHERNAHNFPLDLA 344
INTWADI+NRANLGMEVMHERNAHNFPLDLA
Sbjct: 317 INTWADILNRANLGMEVMHERNAHNFPLDLA 347
>gb|AAD44700.1| (AF130033) PSII D1 reaction center protein [Heterocapsa triquetra]
dbj|BAA83814.2| (AB025587) psbA [Heterocapsa triquetra]
Length = 348
Score = 571 bits (1455), Expect = e-162
Identities = 261/333 (78%), Positives = 295/333 (88%)
Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71
+ WG F +I ST NRLYIGWFG+LM P L+ AT +I AFI APPVDIDGIREPV+G+L
Sbjct: 16 SFWGSFIGFILSTSNRLYIGWFGILMFPLLVLATVAYIAAFIFAPPVDIDGIREPVAGAL 75
Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131
LYGNNIISGA+IP+S AIG+HFYP+WEA DEWLYNGG Y+ +VLHF+ G YMGREW
Sbjct: 76 LYGNNIISGAVIPSSNAIGVHFYPVWEALGFDEWLYNGGTYQFVVLHFIFGAGAYMGREW 135
Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191
E SFRLGMRPWI VA+SAP+ AA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHN
Sbjct: 136 EFSFRLGMRPWIFVAFSAPLVAASAVFIVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHN 195
Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251
ILMHPFH+LGVA VFGGSLFSAMHGSLVTSSL+ ET + S N GY FGQE+ETY+I AA
Sbjct: 196 ILMHPFHILGVAAVFGGSLFSAMHGSLVTSSLLAETAGDLSLNIGYNFGQEDETYSISAA 255
Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311
HGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFT+LG+STMAFNLNG NFNQS++DS G
Sbjct: 256 HGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTSLGVSTMAFNLNGLNFNQSIIDSSG 315
Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344
+IN+WADI+NRA+LGMEVMHERNAHNFPLDLA
Sbjct: 316 HLINSWADIVNRADLGMEVMHERNAHNFPLDLA 348
>gb|AAF89983.1|AF206709_1 (AF206709) PSII D1 reaction center protein [Heterocapsa niei]
Length = 347
Score = 570 bits (1453), Expect = e-161
Identities = 262/333 (78%), Positives = 295/333 (87%)
Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71
+ WG +I ST NRLYIGWFG+LM P L+ AT FI AFI APPVDIDGIREPV+G+L
Sbjct: 15 SFWGYVIGFILSTSNRLYIGWFGILMFPLLVLATVAFISAFIFAPPVDIDGIREPVAGAL 74
Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131
LYGNNIISGA+IP+S AIG+HFYP+WEA DEWLYNGG Y+ +VLHF+LG YMGREW
Sbjct: 75 LYGNNIISGAVIPSSNAIGVHFYPVWEALGFDEWLYNGGTYQFVVLHFILGAGAYMGREW 134
Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191
E +FRLGMRPWI VA+SAP+ AA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHN
Sbjct: 135 EFAFRLGMRPWIFVAFSAPLVAASAVFVVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHN 194
Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251
ILMHPFH+LGVA VFGGSLFSAMHGSLVTSSL+ ET + S N GY FGQE+ETY+I AA
Sbjct: 195 ILMHPFHILGVAAVFGGSLFSAMHGSLVTSSLLAETAGDLSLNVGYNFGQEDETYSISAA 254
Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311
HGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG NFNQS++DS G
Sbjct: 255 HGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDSSG 314
Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344
+IN+WADI+NRA+LGMEVMHERNAHNFPLDLA
Sbjct: 315 HLINSWADIVNRADLGMEVMHERNAHNFPLDLA 347
>gb|AAF89981.1|AF206707_1 (AF206707) PSII D1 reaction center protein [Heterocapsa pygmaea]
Length = 348
Score = 570 bits (1453), Expect = e-161
Identities = 261/333 (78%), Positives = 295/333 (88%)
Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71
+ WG +I ST NRLYIGWFG+LM P L+ AT +I AFI APPVDIDGIREPV+G+L
Sbjct: 16 SFWGYVIGFILSTSNRLYIGWFGILMFPLLVLATVAYIAAFIFAPPVDIDGIREPVAGAL 75
Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131
LYGNNIISGA+IP+S AIG+HFYP+WEA DEWLYNGG Y+ +VLHF+LG YMGREW
Sbjct: 76 LYGNNIISGAVIPSSNAIGVHFYPVWEALGFDEWLYNGGTYQFVVLHFILGAGAYMGREW 135
Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191
E +FRLGMRPWI VA+SAP+ AA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHN
Sbjct: 136 EFAFRLGMRPWIFVAFSAPLVAASAVFIVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHN 195
Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251
ILMHPFH+LGVA VFGGSLFSAMHGSLVTSSL+ ET + S N GY FGQE+ETY+I AA
Sbjct: 196 ILMHPFHILGVAAVFGGSLFSAMHGSLVTSSLVAETAGDLSLNVGYNFGQEDETYSISAA 255
Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311
HGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG NFNQS++DS G
Sbjct: 256 HGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDSSG 315
Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344
+IN+WADI+NRA+LGMEVMHERNAHNFPLDLA
Sbjct: 316 HLINSWADIVNRADLGMEVMHERNAHNFPLDLA 348
>gb|AAB61274.1| (U96630) D1 protein, photosystem II [Phoenix dactylifera]
Length = 303
Score = 566 bits (1444), Expect = e-160
Identities = 278/303 (91%), Positives = 280/303 (91%)
Query: 34 GVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHF 93
GVLMIPTLL ATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHF
Sbjct: 1 GVLMIPTLLXATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHF 60
Query: 94 YPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAA 153
YPIWEAA VDEWLYNGGPYELIVLHFLLGVACYMGREWELSFR PWIAVAYSAPV A
Sbjct: 61 YPIWEAAXVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRXXXSPWIAVAYSAPVGA 120
Query: 154 ATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSA 213
AT+VFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGG
Sbjct: 121 ATSVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGXXXXX 180
Query: 214 MHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHF 273
LVTSSLIRETTENESAN GYRFGQE ETYNIVAAHGYFGRLIFQYASF+NSRSLHF
Sbjct: 181 XXXXLVTSSLIRETTENESANAGYRFGQEGETYNIVAAHGYFGRLIFQYASFHNSRSLHF 240
Query: 274 FLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHE 333
FLAAWPVVGIWFTALGISTMAFNLNGF FNQSVVDSQGR INTWADIINR NLGMEVM
Sbjct: 241 FLAAWPVVGIWFTALGISTMAFNLNGFXFNQSVVDSQGRDINTWADIINRXNLGMEVMXX 300
Query: 334 RNA 336
RNA
Sbjct: 301 RNA 303
>gb|AAF89980.1|AF206706_2 (AF206706) PSII D1 reaction center protein [Heterocapsa rotundata]
Length = 348
Score = 563 bits (1436), Expect = e-159
Identities = 257/333 (77%), Positives = 293/333 (87%)
Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71
+ WG ++ ST NRLYIGWFG+LM P + AT +I AFI APPVDIDGIREPV+G+L
Sbjct: 16 SFWGYVIGFLLSTSNRLYIGWFGILMFPLISLATVAYIAAFIFAPPVDIDGIREPVAGAL 75
Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131
LYGNNIISGA+IP+S AIG+HFYP+WEA DEWLYNGG Y+ +VLHF+ G +MGREW
Sbjct: 76 LYGNNIISGAVIPSSNAIGVHFYPVWEALGFDEWLYNGGTYQFVVLHFIFGAGAWMGREW 135
Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191
E +FRLGMRPWI VA+SAP+ A+ AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHN
Sbjct: 136 EFAFRLGMRPWIFVAFSAPLVASCAVFVVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHN 195
Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251
ILMHPFH+LGVAGVFGGSLFSAMHGSLVTSSL+ ET + S N GY FGQE+ETY+I AA
Sbjct: 196 ILMHPFHILGVAGVFGGSLFSAMHGSLVTSSLLAETAGDLSLNVGYNFGQEDETYSISAA 255
Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311
HGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG NFNQS++DS G
Sbjct: 256 HGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDSSG 315
Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344
+IN+WADI+NRA+LGMEVMHERNAHNFPLDLA
Sbjct: 316 HLINSWADIVNRADLGMEVMHERNAHNFPLDLA 348
>dbj|BAA83815.1| (AB025588) psbA [Gonyaulax polyedra]
Length = 345
Score = 563 bits (1435), Expect = e-159
Identities = 256/335 (76%), Positives = 297/335 (88%)
Query: 10 SENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSG 69
S + WG ++ ST NR YIGWFG+LM P + A +I AFI APPVDIDGIREPV+G
Sbjct: 11 SYSWWGYLVGFVLSTSNRFYIGWFGILMFPLIGLAIVAYISAFIFAPPVDIDGIREPVAG 70
Query: 70 SLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGR 129
SLLYGNNII+GA++P+S AIG+HFYP+WE+ DEWLYNGG Y+ +VLHF++GV+C+MGR
Sbjct: 71 SLLYGNNIITGAVVPSSNAIGVHFYPVWESLGFDEWLYNGGTYQFVVLHFIVGVSCWMGR 130
Query: 130 EWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAE 189
EWE SFRLGMRPWI VA+SAP+ AA+AVF+ YPIGQGSFSDGMPLGISGTFNFM+VFQAE
Sbjct: 131 EWEFSFRLGMRPWIFVAFSAPLVAASAVFVFYPIGQGSFSDGMPLGISGTFNFMLVFQAE 190
Query: 190 HNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIV 249
HNILMHPFH+LGVAGVFGGSLFSAMHGSLV+SSL+ ET+ + S N GY FGQE+ETY+I
Sbjct: 191 HNILMHPFHILGVAGVFGGSLFSAMHGSLVSSSLLAETSGDVSLNVGYNFGQEDETYSIS 250
Query: 250 AAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDS 309
AAHGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG NFNQS++DS
Sbjct: 251 AAHGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDS 310
Query: 310 QGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 344
G +IN+WADI+NRA+LG+EVMHERNAHNFPLDLA
Sbjct: 311 SGHLINSWADIVNRADLGIEVMHERNAHNFPLDLA 345
>dbj|BAA83813.1| (AB025586) psbA [Amphidinium carterae]
Length = 340
Score = 557 bits (1419), Expect = e-157
Identities = 254/333 (76%), Positives = 291/333 (87%)
Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71
N WG F ITS+ NRLYIGWFG+L+ P L AT +I AF AP VDIDGIREPV+GSL
Sbjct: 8 NSWGSFVQTITSSSNRLYIGWFGLLVFPLLSLATVAYITAFFLAPAVDIDGIREPVAGSL 67
Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131
+YGNNIISGA++P+S AIG+HFYP+WE+ +DEWLYNGG Y+ +VLHF +GV +MGREW
Sbjct: 68 IYGNNIISGAVVPSSNAIGVHFYPLWESLGLDEWLYNGGTYQFVVLHFFIGVCGWMGREW 127
Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191
E S+RLGMRPWI VA+SAP+AAA AVF++YPIGQGSFSDGMPLGI GTFNFM+VFQAEH
Sbjct: 128 EFSYRLGMRPWIFVAFSAPIAAAAAVFIVYPIGQGSFSDGMPLGIQGTFNFMLVFQAEHK 187
Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251
ILMHPFH+LGVAGVFGGSLFSAMHGSLV+SSL+ ET +ES N GY FGQE+ETY+I AA
Sbjct: 188 ILMHPFHILGVAGVFGGSLFSAMHGSLVSSSLLAETAGSESLNNGYVFGQEDETYSISAA 247
Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311
H YFGRLIFQY SFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNGFNFNQS++D G
Sbjct: 248 HAYFGRLIFQYGSFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGFNFNQSILDESG 307
Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344
IN+WADI+NRA+LG+EVMHERNAHNFPLDLA
Sbjct: 308 HYINSWADILNRADLGIEVMHERNAHNFPLDLA 340
>gb|AAF31417.1|AF206672_1 (AF206672) photosystem II protein D1 [Amphidinium carterae]
emb|CAB75842.1| (AJ250262) photosystem II D1 protein [Amphidinium operculatum]
gb|AAF89982.1|AF206708_1 (AF206708) PSII D1 reaction center protein [Amphidinium carterae]
Length = 340
Score = 556 bits (1417), Expect = e-157
Identities = 255/333 (76%), Positives = 291/333 (86%)
Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71
N WG F ITS+ NRLYIGWFG+L+ P L AT +I AF AP VDIDGIREPV+GSL
Sbjct: 8 NSWGSFVQTITSSSNRLYIGWFGLLVFPLLSLATVAYITAFFLAPAVDIDGIREPVAGSL 67
Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131
+YGNNIISGA+IP+S AIG+HFYP+WE+ +DEWLYNGG Y+ +V HF LGV +MGREW
Sbjct: 68 IYGNNIISGAVIPSSNAIGVHFYPLWESLGLDEWLYNGGTYQFVVFHFFLGVCGWMGREW 127
Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191
E S+RLGMRPWI VA+SAP+AAA AVF+IYPIGQGSFSDGMPLGI GTFNFM+VFQAEH
Sbjct: 128 EFSYRLGMRPWIFVAFSAPIAAAAAVFIIYPIGQGSFSDGMPLGIQGTFNFMLVFQAEHK 187
Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251
ILMHPFH+LGVAGVFGGSLFSAMHGSLV+SSL+ ET +ES N GY FGQE+ETY+I AA
Sbjct: 188 ILMHPFHILGVAGVFGGSLFSAMHGSLVSSSLLAETAGSESLNNGYVFGQEDETYSISAA 247
Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311
H YFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFT+LG++TMAFNLNGFNFNQS++D G
Sbjct: 248 HAYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTSLGVATMAFNLNGFNFNQSILDESG 307
Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDLA 344
IN+WADI+NRA+LG+EVMHERNAHNFPLDLA
Sbjct: 308 HYINSWADILNRADLGIEVMHERNAHNFPLDLA 340
>dbj|BAA83816.2| (AB025589) psbA [Alexandrium tamarense]
Length = 347
Score = 551 bits (1405), Expect = e-156
Identities = 252/332 (75%), Positives = 291/332 (86%)
Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71
N WG +I ST NR YIGWFG+ M P A ++ AFI APPVDIDGIREPV+GSL
Sbjct: 14 NWWGTVIGFILSTSNRFYIGWFGIFMFPLTGLAIIAYVAAFILAPPVDIDGIREPVAGSL 73
Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131
LYGNNIISGA+IP+S AIG+HFYP WE+A++ EWLYNGG Y+ +VLHF+ GV+ +MGREW
Sbjct: 74 LYGNNIISGAVIPSSNAIGVHFYPEWESATLLEWLYNGGTYQFVVLHFIGGVSSWMGREW 133
Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191
E SFRLGMRPWI +A+SAP+ AATAVF+ YPIGQGSFSDGMPLG+SGTFNFM+VFQAEHN
Sbjct: 134 EFSFRLGMRPWIYLAFSAPLVAATAVFVFYPIGQGSFSDGMPLGVSGTFNFMLVFQAEHN 193
Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251
ILMHPFH+LGVAGVFGGSLFSAMHGSLVTSSL+ ET+ + S N GY FGQE+ETY+I AA
Sbjct: 194 ILMHPFHILGVAGVFGGSLFSAMHGSLVTSSLLAETSGDVSLNVGYNFGQEDETYSISAA 253
Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311
HGYFGRLIFQYASFNNSRSLHFFLAAWPV+GIWFTALG+STMAFNLNG NFNQS++DS G
Sbjct: 254 HGYFGRLIFQYASFNNSRSLHFFLAAWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDSNG 313
Query: 312 RVINTWADIINRANLGMEVMHERNAHNFPLDL 343
+IN+WAD++NRANLG+EVMHERN H++PLDL
Sbjct: 314 HLINSWADLVNRANLGIEVMHERNTHHYPLDL 345
>dbj|BAA83812.1| (AB025585) psbA [Prorocentrum micans]
Length = 343
Score = 540 bits (1376), Expect = e-152
Identities = 247/331 (74%), Positives = 287/331 (86%)
Query: 14 WGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLY 73
W +I ST +RLYIGWFGVL+ P + +T ++ AFI APPVDIDGIREPVSGSLLY
Sbjct: 13 WSVVVAYIVSTNSRLYIGWFGVLLFPLIAVSTVAYVAAFILAPPVDIDGIREPVSGSLLY 72
Query: 74 GNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWEL 133
NNII+GA+IP+S AIG+HFYP+WEA S +EWLYNGG Y+ +VLHFL V ++GRE+E
Sbjct: 73 SNNIITGAVIPSSNAIGVHFYPVWEAISNNEWLYNGGTYQFVVLHFLAAVLAWLGREYEY 132
Query: 134 SFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNIL 193
SFRLGMRPWI +A+SAPV AA+AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNIL
Sbjct: 133 SFRLGMRPWIYLAFSAPVVAASAVFVVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNIL 192
Query: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHG 253
MHPFH+LGV+ VFGGSLFSAMHGSLVTSSL+ ET +S N GY FGQE+ETY I AAHG
Sbjct: 193 MHPFHILGVSAVFGGSLFSAMHGSLVTSSLLSETASYDSLNAGYVFGQEDETYAISAAHG 252
Query: 254 YFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRV 313
YFGRL+FQY SFNNSRSLHFFLAAWPV+GIW TA+G+STMAFNLNG NFNQS++DS G V
Sbjct: 253 YFGRLLFQYGSFNNSRSLHFFLAAWPVIGIWCTAIGVSTMAFNLNGLNFNQSLLDSSGHV 312
Query: 314 INTWADIINRANLGMEVMHERNAHNFPLDLA 344
+N+WAD++NRA+LGMEVMHERN HNFPLDLA
Sbjct: 313 VNSWADVVNRADLGMEVMHERNTHNFPLDLA 343
>gb|AAB61276.1| (U96632) D1 protein, photosystem II [Ludisia discolor]
Length = 275
Score = 527 bits (1344), Expect = e-149
Identities = 256/274 (93%), Positives = 258/274 (93%)
Query: 41 LLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA 100
L TSVFII FI PPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA
Sbjct: 2 LXXXTSVFIIXFIXXPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAA 61
Query: 101 SVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLI 160
SVDEWLYNGGPYELIVLHFLLGVACYMG EWELSFRLGMRPWIAVAYSAPVAAA AVFLI
Sbjct: 62 SVDEWLYNGGPYELIVLHFLLGVACYMGCEWELSFRLGMRPWIAVAYSAPVAAAAAVFLI 121
Query: 161 YPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVT 220
YP+GQGSFSDGMPLGI GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVT
Sbjct: 122 YPVGQGSFSDGMPLGIXGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVT 181
Query: 221 SSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV 280
SSLIRETTENESANEGYRFGQE ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV
Sbjct: 182 SSLIRETTENESANEGYRFGQEGETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPV 241
Query: 281 VGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVI 314
VGIWFTALGIST+ FNL GFNFN SVVD G VI
Sbjct: 242 VGIWFTALGISTIXFNLXGFNFNXSVVDXXGXVI 275
>dbj|BAA83817.2| (AB025590) psbA [Alexandrium catenella]
Length = 335
Score = 520 bits (1326), Expect = e-147
Identities = 241/322 (74%), Positives = 278/322 (85%)
Query: 12 NLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSL 71
N WG +I ST NRLY+GWFG M P A ++ AFI APPVDIDGIREPV+GSL
Sbjct: 14 NWWGTIIGFILSTGNRLYVGWFGTFMFPLSGLAIIGYMTAFILAPPVDIDGIREPVAGSL 73
Query: 72 LYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREW 131
LYGNNIISG +IP+S AIG+HFYP WE+A++ EWLYNGG Y+ IVLHF+ GV+ +MGREW
Sbjct: 74 LYGNNIISGGVIPSSNAIGVHFYPEWESATLLEWLYNGGTYQFIVLHFIGGVSSWMGREW 133
Query: 132 ELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN 191
E SFRLGMRPWI +A+SAP+ AATAVF++YPIGQGSFSDGMPLG+SGTFNFM+VFQAE N
Sbjct: 134 EFSFRLGMRPWIYLAFSAPLIAATAVFILYPIGQGSFSDGMPLGMSGTFNFMLVFQAEQN 193
Query: 192 ILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAA 251
ILMHPFH+LGVAGVFGGSLFSAMHGSLVTSSL+ E+ + S N GY FGQE+ETY+I AA
Sbjct: 194 ILMHPFHILGVAGVFGGSLFSAMHGSLVTSSLLAESPGDVSLNIGYNFGQEDETYSISAA 253
Query: 252 HGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQG 311
HGYFGRLIFQYASFNNSRSLHFFL WPV+GIWFTALG+STMAFNLNG NFNQS++DS G
Sbjct: 254 HGYFGRLIFQYASFNNSRSLHFFLGGWPVIGIWFTALGVSTMAFNLNGLNFNQSIIDSNG 313
Query: 312 RVINTWADIINRANLGMEVMHE 333
+IN+WAD++NRANLG+EVMHE
Sbjct: 314 HLINSWADLMNRANLGIEVMHE 335
>gb|AAF89986.1|AF206712_1 (AF206712) PSII D1 reaction center protein [Thoracosphaera heimii]
Length = 271
Score = 468 bits (1191), Expect = e-131
Identities = 215/271 (79%), Positives = 248/271 (91%)
Query: 66 PVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVAC 125
PVSGSLLYGNNIISG++IP+S AIG+HFYP+WEA S DEWLYNGG Y+LIVLHF+LGV
Sbjct: 1 PVSGSLLYGNNIISGSVIPSSNAIGVHFYPVWEATSADEWLYNGGSYQLIVLHFMLGVIG 60
Query: 126 YMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIV 185
++GREWE SFRLGMRPWI VA+SAPVAAA+AVF++YPIGQGSFSDGMPLGISGTFNFM+V
Sbjct: 61 WLGREWEFSFRLGMRPWIFVAFSAPVAAASAVFVVYPIGQGSFSDGMPLGISGTFNFMLV 120
Query: 186 FQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEET 245
FQAEHNILMHPF++LGV GVFGGSLFSAMHGSLV+S+L ET + + N GY FGQ ET
Sbjct: 121 FQAEHNILMHPFYILGVIGVFGGSLFSAMHGSLVSSTLTCETVGDSTLNSGYLFGQTFET 180
Query: 246 YNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQS 305
Y+I +AHGYFGRLIFQYASFNNSRSLHFFL AWPV+GIWFTALG+STMAFNLNG NFNQS
Sbjct: 181 YSISSAHGYFGRLIFQYASFNNSRSLHFFLGAWPVLGIWFTALGVSTMAFNLNGLNFNQS 240
Query: 306 VVDSQGRVINTWADIINRANLGMEVMHERNA 336
+VD+ G++IN+WAD++NRA+LG+EVMHERNA
Sbjct: 241 IVDNNGQLINSWADLVNRADLGIEVMHERNA 271
>gb|AAF89984.1|AF206710_1 (AF206710) PSII D1 reaction center protein [Scrippsiella
trochoidea]
Length = 264
Score = 446 bits (1136), Expect = e-124
Identities = 203/264 (76%), Positives = 236/264 (88%)
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYM 127
+GSLLYGNNIISG+++P+S AIG+HFYP+WE+ + EWLYNGG Y+ +VLHF++GV+ +M
Sbjct: 1 AGSLLYGNNIISGSLVPSSNAIGVHFYPVWESPAYYEWLYNGGSYQFVVLHFIVGVSAWM 60
Query: 128 GREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQ 187
GREWE SFRL MRPWI +AYSAPV A AVF++YPIGQGSFSDGMPLGISGTFNFM+VFQ
Sbjct: 61 GREWEFSFRLSMRPWIILAYSAPVTGAAAVFIVYPIGQGSFSDGMPLGISGTFNFMLVFQ 120
Query: 188 AEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYN 247
AEHNILMHPFH+LGVA VFGGSLFSAMHGSLVTSSL+ E+ + S N GY FGQ ETY+
Sbjct: 121 AEHNILMHPFHILGVAAVFGGSLFSAMHGSLVTSSLLAESAGDLSLNAGYNFGQVSETYS 180
Query: 248 IVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVV 307
I AAHGYFGRLIFQYASFNNSRSLHFFL AWPV+GIWFTALG+STMAFNLNG NFNQS+V
Sbjct: 181 ISAAHGYFGRLIFQYASFNNSRSLHFFLGAWPVIGIWFTALGVSTMAFNLNGLNFNQSIV 240
Query: 308 DSQGRVINTWADIINRANLGMEVM 331
DS G +I++WADI+NRA+LG+EVM
Sbjct: 241 DSSGHLISSWADIMNRADLGIEVM 264
>gb|AAD49557.1| (AF107784) PsbA [Trichodesmium sp. IMS101]
Length = 228
Score = 433 bits (1101), Expect = e-120
Identities = 200/228 (87%), Positives = 218/228 (94%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+GWFGVLMIPTLLTAT +IIAF+AAPPVDIDGIREPV+GSL++GNNIISGA++P+S A
Sbjct: 1 YVGWFGVLMIPTLLTATICYIIAFVAAPPVDIDGIREPVAGSLMFGNNIISGAVVPSSNA 60
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
IGLHFYPIWEAAS+DEWLYNGGPY+L++ HFL+G+ YMGREWELS+RLGMRPWI VAYS
Sbjct: 61 IGLHFYPIWEAASLDEWLYNGGPYQLVIFHFLIGIFTYMGREWELSYRLGMRPWICVAYS 120
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGG 208
APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGG
Sbjct: 121 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGG 180
Query: 209 SLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFG 256
SLFSAMHGSLVTSSL+RETTE ES N GY+FGQEEETYNIVAAHGYFG
Sbjct: 181 SLFSAMHGSLVTSSLVRETTETESQNYGYKFGQEEETYNIVAAHGYFG 228
>pir||S24992 photosystem II protein D1 - common sunflower chloroplast
(fragment)
Length = 187
Score = 379 bits (964), Expect = e-104
Identities = 183/187 (97%), Positives = 185/187 (98%)
Query: 167 SFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRE 226
SFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRE
Sbjct: 1 SFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRE 60
Query: 227 TTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFT 286
TTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFT
Sbjct: 61 TTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFT 120
Query: 287 ALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAAV 346
ALGISTMAFNLNGFNFNQSVVDSQGRVIN+WADIIN ANLGMEVMHERNAHNFPLDLAA+
Sbjct: 121 ALGISTMAFNLNGFNFNQSVVDSQGRVINSWADIINPANLGMEVMHERNAHNFPLDLAAI 180
Query: 347 EAPSING 353
EAPS NG
Sbjct: 181 EAPSTNG 187
>emb|CAA10627.1| (AJ132264) PSII D1 reaction-centre protein [Skeletonema costatum]
Length = 205
Score = 375 bits (953), Expect = e-103
Identities = 181/204 (88%), Positives = 190/204 (92%), Gaps = 7/204 (3%)
Query: 156 AVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMH 215
AVFL+YPIGQGSFSDGMPLGISGTFNFM+VFQAEHNILMHPFHM GVAGVFGGSLFSAMH
Sbjct: 1 AVFLVYPIGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMAGVAGVFGGSLFSAMH 60
Query: 216 GSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFL 275
GSLVTSSLIRETTENES N GY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSR+LHFFL
Sbjct: 61 GSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRALHFFL 120
Query: 276 AAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERN 335
A WPV+GIW TA+GISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRA+LGMEVMHERN
Sbjct: 121 ALWPVLGIWLTAMGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRADLGMEVMHERN 180
Query: 336 AHNFPLDLA-------AVEAPSIN 352
AHNFPLDLA A AP++N
Sbjct: 181 AHNFPLDLASGDVLPVAFTAPAVN 204
>pir||S48682 D1 protein - Spinach
Length = 232
Score = 375 bits (952), Expect = e-103
Identities = 217/343 (63%), Positives = 221/343 (64%), Gaps = 111/343 (32%)
Query: 2 TAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDID 61
TAILERRESE+LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPP
Sbjct: 1 TAILERRESESLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPP---- 56
Query: 62 GIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLL 121
L G + + WE L F L
Sbjct: 57 ---------FLLG--------------VACYMGREWE------------------LSFRL 75
Query: 122 GVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFN 181
G+ R W IAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFN
Sbjct: 76 GM-----RPW-----------IAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFN 119
Query: 182 FMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQ 241
FMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENES
Sbjct: 120 FMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENES--------- 170
Query: 242 EEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFN 301
IWFTALGISTMAFNLNGFN
Sbjct: 171 -----------------------------------------IWFTALGISTMAFNLNGFN 189
Query: 302 FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 344
FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA
Sbjct: 190 FNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLA 232
>gb|AAA84549.1| (M16899) 32 kDa membrane protein [Pisum sativum]
Length = 156
Score = 325 bits (824), Expect = 6e-88
Identities = 155/156 (99%), Positives = 156/156 (99%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERR+SENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRDSENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL
Sbjct: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL 120
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA 156
LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA
Sbjct: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATA 156
>sp|Q01366|PSBA_PHAVU PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||S25494 photosystem II protein D1 - kidney bean chloroplast (fragment)
emb|CAA48184.1| (X68048) Photosystem II 32kDa Q-B protein [Phaseolus vulgaris]
Length = 147
Score = 280 bits (708), Expect = 2e-74
Identities = 135/146 (92%), Positives = 139/146 (94%)
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNN 267
GSLFSAMHGSLVTSSLIRE T NES NEGYRFG+EEETYNIV AHGYF RLI+QYASFNN
Sbjct: 2 GSLFSAMHGSLVTSSLIREPTVNESPNEGYRFGREEETYNIVPAHGYFDRLIYQYASFNN 61
Query: 268 SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLG 327
SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTW DIINRANLG
Sbjct: 62 SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWTDIINRANLG 121
Query: 328 MEVMHERNAHNFPLDLAAVEAPSING 353
MEVMHERNAHN PLDLAA+EAPS+NG
Sbjct: 122 MEVMHERNAHNGPLDLAAMEAPSVNG 147
>gb|AAF89985.1|AF206711_1 (AF206711) PSII D1 reaction center protein [Protoceratium
reticulatum]
Length = 151
Score = 266 bits (673), Expect = 3e-70
Identities = 123/151 (81%), Positives = 138/151 (90%)
Query: 181 NFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG 240
NFM+VFQAEHNILMHPFH+LGVAGVFGGSLFSAMHGSLVTSSL+ E+ + S N GY FG
Sbjct: 1 NFMLVFQAEHNILMHPFHILGVAGVFGGSLFSAMHGSLVTSSLLAESPGDVSLNIGYNFG 60
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
QE+ETY+I AAHGYFGRLIFQYASFNNSRSLHFFL WPV+GIWFTALG+STMAFNLNG
Sbjct: 61 QEDETYSISAAHGYFGRLIFQYASFNNSRSLHFFLGGWPVIGIWFTALGVSTMAFNLNGL 120
Query: 301 NFNQSVVDSQGRVINTWADIINRANLGMEVM 331
NFNQS++DS G +IN+WADI+NRA+LGMEVM
Sbjct: 121 NFNQSIIDSSGHLINSWADIMNRADLGMEVM 151
>dbj|BAA96363.1| (AB043963) photosystem II Qb protein [Bruguiera gymnorhiza]
Length = 128
Score = 262 bits (662), Expect = 6e-69
Identities = 126/128 (98%), Positives = 126/128 (98%)
Query: 226 ETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 285
ETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF
Sbjct: 1 ETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWF 60
Query: 286 TALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNAHNFPLDLAA 345
T LGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNA NFPLDLAA
Sbjct: 61 TVLGISTMAFNLNGFNFNQSVVDSQGRVINTWADIINRANLGMEVMHERNALNFPLDLAA 120
Query: 346 VEAPSING 353
VEAPSING
Sbjct: 121 VEAPSING 128
>gb|AAF08827.1| (AF193066) photosystem II Q(B) protein [Bassia scoparia]
Length = 115
Score = 236 bits (597), Expect = 2e-61
Identities = 114/115 (99%), Positives = 114/115 (99%)
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNN 267
GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYA FNN
Sbjct: 1 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAGFNN 60
Query: 268 SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIIN 322
SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIIN
Sbjct: 61 SRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSVVDSQGRVINTWADIIN 115
>pir||C31183 photosystem II protein D1 - barley chloroplast (fragment)
Length = 109
Score = 226 bits (571), Expect = 3e-58
Identities = 108/109 (99%), Positives = 109/109 (99%)
Query: 170 DGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTE 229
DGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTE
Sbjct: 1 DGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTE 60
Query: 230 NESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAW 278
NESANEGY+FGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAW
Sbjct: 61 NESANEGYKFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAW 109
>gb|AAC16320.1| (AF061287) D1 protein [Senecio vulgaris]
Length = 92
Score = 195 bits (490), Expect = 8e-49
Identities = 92/92 (100%), Positives = 92/92 (100%)
Query: 235 EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 294
EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA
Sbjct: 1 EGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMA 60
Query: 295 FNLNGFNFNQSVVDSQGRVINTWADIINRANL 326
FNLNGFNFNQSVVDSQGRVINTWADIINRANL
Sbjct: 61 FNLNGFNFNQSVVDSQGRVINTWADIINRANL 92
>emb|CAA73828.1| (Y13398) D1 protein [Porphyra linearis]
Length = 97
Score = 186 bits (468), Expect = 3e-46
Identities = 89/97 (91%), Positives = 92/97 (94%)
Query: 201 GVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIF 260
GVAGVFGGSLFSAMHGSLVTSSLIRET+ENESAN GY+FGQEEETYNIVAAHGYFGRLIF
Sbjct: 1 GVAGVFGGSLFSAMHGSLVTSSLIRETSENESANYGYKFGQEEETYNIVAAHGYFGRLIF 60
Query: 261 QYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297
QYASFNNSRSLHFFL WPVVGIW TAL +STMAFNL
Sbjct: 61 QYASFNNSRSLHFFLGLWPVVGIWLTALSVSTMAFNL 97
>emb|CAA75354.1| (Y15074) D1 protein [Haslea ostrearia]
Length = 95
Score = 181 bits (455), Expect = 1e-44
Identities = 85/95 (89%), Positives = 91/95 (95%)
Query: 202 VAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQ 261
VAGVFGGSLFSAMHGSLVTSSLIRETTE+ES N GY+FGQEEETYNIVAAHGYFGRLIFQ
Sbjct: 1 VAGVFGGSLFSAMHGSLVTSSLIRETTESESVNYGYKFGQEEETYNIVAAHGYFGRLIFQ 60
Query: 262 YASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFN 296
YASFNNSR+LHFFLA WPVVGIW T++G+STMAFN
Sbjct: 61 YASFNNSRALHFFLALWPVVGIWLTSMGVSTMAFN 95
>prf||1006312A protein QB [Solanum nigrum]
Length = 85
Score = 178 bits (448), Expect = 7e-44
Identities = 85/85 (100%), Positives = 85/85 (100%)
Query: 247 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 306
NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV
Sbjct: 1 NIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNFNQSV 60
Query: 307 VDSQGRVINTWADIINRANLGMEVM 331
VDSQGRVINTWADIINRANLGMEVM
Sbjct: 61 VDSQGRVINTWADIINRANLGMEVM 85
>sp|P09192|PSBD_SYNY3 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||PS0097 photosystem II protein D2 - Synechocystis sp. (strain PCC 6803)
dbj|BAA10851.1| (D64006) photosystem II D2 protein [Synechocystis sp.]
gb|AAA85377.1| (M21538) psbD gene product [Synechocystis sp.]
dbj|BAA17800.1| (D90909) photosystem II D2 protein [Synechocystis sp.]
Length = 352
Score = 174 bits (436), Expect = 2e-42
Identities = 99/305 (32%), Positives = 165/305 (53%), Gaps = 10/305 (3%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT + R E W + + ++IGW G+L+ P A ++
Sbjct: 1 MTIAVGRAPVERGWFDVLDDWLKRDRFVFIGWSGLLLFPCAFMALGGWLTGTTFVTSWYT 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVL 117
G+ + S L G N ++ A+ + A G +W ++ W GG + + L
Sbjct: 61 HGL----ASSYLEGANFLTVAVSSPADAFGHSLLFLWGPEAQGNLTRWFQIGGLWPFVAL 116
Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177
H G+ +M R++E+S +G+RP+ A+A+S P+A +VFL+YP+GQ S+ G++
Sbjct: 117 HGAFGLIGFMLRQFEISRLVGIRPYNAIAFSGPIAVFVSVFLMYPLGQSSWFFAPSFGVA 176
Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237
G F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L E E+ + +
Sbjct: 177 GIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLF-EDGEDSNTFRAF 235
Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297
Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +++GI +A NL
Sbjct: 236 EPTQAEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSSVGIVGLALNL 293
Query: 298 NGFNF 302
++F
Sbjct: 294 RAYDF 298
>sp|P51766|PSBD_PROHO PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
gb|AAA82944.1| (U40144) D2 [Prochlorothrix hollandica]
Length = 351
Score = 173 bits (434), Expect = 3e-42
Identities = 102/306 (33%), Positives = 171/306 (55%), Gaps = 13/306 (4%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT + R + +W+ + +++GW G+L+ P A ++ A
Sbjct: 1 MTTAVGRISDRGWFDVLDDWL-KRDRFVFVGWSGLLLFPCAYMAIGGWLTGTTFATSWYT 59
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIW----EAASVDEWLYNGGPYELIV 116
GI + S L G N ++ AI + ++G +W + A V W+ GG +
Sbjct: 60 HGI----ASSYLEGCNFLTVAISTPADSMGHALLLLWGPEAQGAFV-RWVQLGGLWTFTA 114
Query: 117 LHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGI 176
LH + +M R++E++ +G+RP+ A+A+SAP+A +VFLIYP+GQ S+ G+
Sbjct: 115 LHGAFALIGFMLRQFEIARLVGVRPYNAIAFSAPIALFVSVFLIYPLGQSSWFFAPSFGV 174
Query: 177 SGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEG 236
+ F F++ FQ HN ++PFHM+GVAGV GG+L A+HG+ V ++L E ++ + G
Sbjct: 175 AAIFRFILFFQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLF-EDGDDATTFRG 233
Query: 237 YRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFN 296
+ Q EETY++V A+ ++ + IF A F+N R LHFF+ PV+G+W +A+G+ +A N
Sbjct: 234 FEPTQSEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVMGLWMSAIGVVGLALN 291
Query: 297 LNGFNF 302
L ++F
Sbjct: 292 LRSYDF 297
>pir||S42646 photosystem II protein D2 - Anabaena sp. (strain PCC 7120)
Length = 351
Score = 173 bits (434), Expect = 3e-42
Identities = 98/305 (32%), Positives = 166/305 (54%), Gaps = 11/305 (3%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT + R S + +W+ + +++GW G+L+ P A ++
Sbjct: 1 MTIAVGRAPSRGWFDVLDDWL-KRDRFVFVGWSGILLFPCAFLALGGWLTGTTFVTSWYT 59
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVL 117
G+ + S L G N ++ A+ + ++G +W + W GG + + L
Sbjct: 60 HGL----ASSYLEGANFLTVAVSSPADSMGHSLLLLWGPEAQGDLTRWFQLGGLWPFVAL 115
Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177
H G+ +M R++E++ +G+RP+ A+A+SAP+A +VFL+YP+GQ S+ G++
Sbjct: 116 HGAFGLIGFMLRQFEIARLVGIRPYNALAFSAPIAVFVSVFLMYPLGQSSWFFAPSFGVA 175
Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237
F F++ Q HN ++PFHM+GVAGV GG+L A+HG+ V ++L E E + +
Sbjct: 176 AIFRFLLFLQGFHNWTLNPFHMMGVAGVLGGALLCAIHGATVENTLF-EDGEGANTFRAF 234
Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297
Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +A+GI +A NL
Sbjct: 235 NPTQSEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSAVGIVGLALNL 292
Query: 298 NGFNF 302
++F
Sbjct: 293 RAYDF 297
>gi|11467543 PSII, D2 reaction-center protein [Odontella sinensis]
sp|P49478|PSBD_ODOSI PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||S78348 photosystem II protein D2 - Odontella sinensis chloroplast
emb|CAA91721.1| (Z67753) PSII, D2 reaction-center protein [Odontella sinensis]
Length = 351
Score = 171 bits (429), Expect = 1e-41
Identities = 95/307 (30%), Positives = 168/307 (53%), Gaps = 15/307 (4%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT + + + L+ +W+ + ++IGW G+L+ PT A ++
Sbjct: 1 MTIAIGQNQERGLFDLIDDWLKK-DRFVFIGWSGLLLFPTAYLAAGGWMTGTTFVTSWYT 59
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117
G+ + S L G N ++ A+ + ++G +W + + W GG + I L
Sbjct: 60 HGL----ASSYLEGCNFLTAAVSTPANSMGHSLLLLWGPEAQGDFTRWCQIGGLWAFIAL 115
Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177
H G+ + R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ G++
Sbjct: 116 HGAFGLIGFCLRQFEIARLVGIRPYNAIAFSGPIAVFVSVFLLYPLGQASWFFAPSFGVA 175
Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237
F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L + ++AN
Sbjct: 176 AIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFE---DGDAANTFR 232
Query: 238 RF--GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295
F Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+GI +A
Sbjct: 233 AFTPTQSEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWTSAIGIVGLAL 290
Query: 296 NLNGFNF 302
NL ++F
Sbjct: 291 NLRAYDF 297
>emb|CAA75405.1| (Y15137) D1 protein [Skeletonema costatum]
Length = 89
Score = 170 bits (427), Expect = 2e-41
Identities = 80/89 (89%), Positives = 84/89 (93%)
Query: 201 GVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIF 260
GVAGVFGGSLFSAMHGSLVTSSLIRETTENES N GY+FGQEEETYNIVAAHGYFGRLIF
Sbjct: 1 GVAGVFGGSLFSAMHGSLVTSSLIRETTENESTNYGYKFGQEEETYNIVAAHGYFGRLIF 60
Query: 261 QYASFNNSRSLHFFLAAWPVVGIWFTALG 289
QYASFNNSR+LHFFLA WPV+G W TA+G
Sbjct: 61 QYASFNNSRALHFFLALWPVLGSWLTAMG 89
>sp|P20898|PSBD_SYNP2 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
gb|AAA79119.1| (M29659) photosystem II reaction center D2 protein [Synechococcus
sp.]
gb|AAB61354.1| (U36390) D2 protein of photosystem II [Synechococcus sp. PCC 7002]
prf||1707315A photosystem II D2 protein [Synechococcus sp.]
Length = 352
Score = 170 bits (427), Expect = 2e-41
Identities = 95/305 (31%), Positives = 165/305 (53%), Gaps = 10/305 (3%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT + R E W + + +++GW G+L+ P A ++
Sbjct: 1 MTIAVGRAPQERGWFDVLDDWLKRDRFVFVGWSGILLFPCAFMALGGWLTGTTFVTSWYT 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAS---VDEWLYNGGPYELIVL 117
G+ + S L G N ++ A+ + ++G +W + W GG + + L
Sbjct: 61 HGL----ASSYLEGCNFLTVAVSSPADSLGHSLLFLWGPEANWNFARWCQLGGLWSFVAL 116
Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177
H G+ +M R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ G++
Sbjct: 117 HGAFGLIGFMLRQFEIARLVGIRPYNAIAFSGPIAVFVSVFLMYPLGQSSWFFAPSFGVA 176
Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237
G F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L E ++ + +
Sbjct: 177 GIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLF-EDSDQANTFRAF 235
Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297
Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +++GI +A NL
Sbjct: 236 EPTQAEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSSVGIVGLALNL 293
Query: 298 NGFNF 302
++F
Sbjct: 294 RAYDF 298
>sp|P11005|PSBD_SYNP7 PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||JT0321 photosystem II protein D2 - Synechococcus sp. (strain PCC 7942)
gb|AAA27357.1| (M20815) D2 thylakoid protein [Synechococcus sp.]
gb|AAA27358.1| (M20814) psbDI thylakoid protein [Synechococcus sp.]
Length = 352
Score = 170 bits (426), Expect = 3e-41
Identities = 96/305 (31%), Positives = 163/305 (52%), Gaps = 10/305 (3%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT + R +E W + + +++GW G+L+ P A ++
Sbjct: 1 MTIAVGRAPAERGWFDVLDDWLKRDRFVFVGWSGLLLFPCAYLALGGWLTGTSFVTSWYT 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVL 117
GI + S L G N ++ A+ + A G +W + W GG + + L
Sbjct: 61 HGI----ASSYLEGGNFLTVAVSTPADAFGHSLMLLWGPEAQGNFVRWCQLGGLWNFVAL 116
Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177
H + +M R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ G++
Sbjct: 117 HGAFALIGFMLRQFEIARLVGVRPYNAIAFSGPIAVFVSVFLMYPLGQSSWFFAPSFGVA 176
Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237
F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L E +E + +
Sbjct: 177 AIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLF-EDSEQSNTFRAF 235
Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297
Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +++GI +A NL
Sbjct: 236 EPTQAEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSSIGIVGLALNL 293
Query: 298 NGFNF 302
++F
Sbjct: 294 RAYDF 298
>gi|11467390 D2 protein of the photosystem II reaction center core heterodimer
[Cyanophora paradoxa]
sp|P48079|PSBD_CYAPA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||T06935 photosystem II protein D2 - Cyanophora paradoxa cyanelle
gb|AAA81278.1| (U30821) D2 protein of the photosystem II reaction center core
heterodimer [Cyanophora paradoxa]
Length = 352
Score = 169 bits (424), Expect = 5e-41
Identities = 91/305 (29%), Positives = 162/305 (52%), Gaps = 10/305 (3%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT + R +SE W + + +++GW G+L++P A +
Sbjct: 1 MTVAIGRSDSERGWFDVLDDWLKRDRFVFLGWSGLLLLPCAYLAVGAWFTGTTFVTSWYT 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117
G+ + S L G N ++ A+ + ++G +W + + W GG + L
Sbjct: 61 HGL----ASSYLEGCNFLTAAVSTPANSMGHSILFVWGPEAQGDFTRWCQIGGLWTFTAL 116
Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177
H LG+ + R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ + G++
Sbjct: 117 HGALGLIGFTLRQFEIARLIGLRPYNAIAFSGPIAVFVSVFLLYPLGQAGWFFAPSFGVA 176
Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237
F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + +
Sbjct: 177 AIFRFLLFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGSNTFPAF 235
Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297
Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ + NL
Sbjct: 236 NPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLGVNL 293
Query: 298 NGFNF 302
++F
Sbjct: 294 RAYDF 298
>sp|P28253|PSBD_CYACA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||F2KKD2 photosystem II protein D2 - red alga (Cyanidium caldarium)
chloroplast
emb|CAA44459.1| (X62578) D2 protein of PSII [Cyanidium caldarium]
Length = 351
Score = 169 bits (423), Expect = 6e-41
Identities = 96/307 (31%), Positives = 165/307 (53%), Gaps = 15/307 (4%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT +ER L+ +W+ + ++IGW G+L+ P A +
Sbjct: 1 MTIAIERNIQRGLFDLVDDWL-KRDRFVFIGWSGLLLFPCSYLALGAWFTGTTFVTSWYT 59
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117
G+ + S L G N ++ A+ + ++G +W + + W GG + L
Sbjct: 60 HGL----ASSYLEGCNFLTAAVSSPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWTFTAL 115
Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177
H G+ + R++E++ +G+RP+ A+A+S P+A +VFLIYP+GQ S+ G++
Sbjct: 116 HGAFGLIGFCLRQFEIARLVGIRPYNAIAFSGPIAVFVSVFLIYPLGQASWFFAPSFGVA 175
Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237
F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L + E+AN
Sbjct: 176 AIFRFILFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLFE---DGEAANTFR 232
Query: 238 RF--GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295
F Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +++GI +A
Sbjct: 233 AFTPTQSEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWTSSIGIIGLAL 290
Query: 296 NLNGFNF 302
NL ++F
Sbjct: 291 NLRAYDF 297
>gi|11466345 D2 reaction center protein of photosystem II [Mesostigma viride]
gb|AAF43789.1|AF166114_1 (AF166114) D2 reaction center protein of photosystem II [Mesostigma
viride]
Length = 354
Score = 167 bits (419), Expect = 2e-40
Identities = 93/280 (33%), Positives = 155/280 (55%), Gaps = 14/280 (5%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
++IGW G+L++P A F G+ + S L G N+++ A+ S
Sbjct: 30 VFIGWSGLLLLPCAYFALGGFFTGNTFVTSWYTHGL----ASSYLEGCNVLTAAVSTPSN 85
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
A+G +W + + W GG + LH G+ +M R++E++ + +RP+ A
Sbjct: 86 AMGHSLLLLWGPEAQGDFTRWCQLGGLWTFTALHGAFGLIGFMLRQFEIARAVKIRPYNA 145
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+S P+A +VFLIYP+GQ S+ G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 146 IAFSGPIAVFVSVFLIYPLGQQSWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 205
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFG--QEEETYNIVAAHGYFGRLIFQY 262
V G +L A+HG+ V ++L + ++AN F Q EETY++V A+ ++ ++
Sbjct: 206 VLGAALLCAIHGATVENTLFE---DGDAANTFRAFNPTQSEETYSMVTANRFWSQIF--G 260
Query: 263 ASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
+F N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 261 VAFANKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 300
>gi|11467794 D2 reaction-center protein of photosystem II [Nephroselmis
olivacea]
gb|AAD54816.1|AF137379_39 (AF137379) D2 reaction-center protein of photosystem II
[Nephroselmis olivacea]
Length = 352
Score = 167 bits (419), Expect = 2e-40
Identities = 94/303 (31%), Positives = 165/303 (54%), Gaps = 11/303 (3%)
Query: 3 AILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDG 62
AI E L+ +W+ + +++GW G+L++P A ++ G
Sbjct: 4 AIGTPEEKRGLFDDMDDWLRR-DRFVFVGWSGLLLLPCAYFAVGGWLTGTTFVTSWYTHG 62
Query: 63 IREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHF 119
+ + S L G N+++ A+ + ++ +W + + W GG + I LH
Sbjct: 63 L----ASSYLEGCNVLTAAVSTPANSMAHSLLLLWGPEAQGDFTRWCQLGGLWTFIALHG 118
Query: 120 LLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGT 179
G+ +M R++E++ +G+RP+ A+A+S P++ +VFLIYP+GQ + G++
Sbjct: 119 SFGLIGFMLRQFEIARAIGLRPYNAIAFSGPISVFVSVFLIYPLGQSGWFFAPSFGVAAI 178
Query: 180 FNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRF 239
F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + +
Sbjct: 179 FRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNP 237
Query: 240 GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNG 299
Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +A+G+ +A NL
Sbjct: 238 TQAEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRA 295
Query: 300 FNF 302
++F
Sbjct: 296 YDF 298
>gi|11465589 unknown; Photosystem II D2 protein [Cyanidium caldarium]
gb|AAF13026.1|AF022186_200 (AF022186) unknown; Photosystem II D2 protein [Cyanidium caldarium]
Length = 351
Score = 166 bits (416), Expect = 4e-40
Identities = 92/305 (30%), Positives = 160/305 (52%), Gaps = 11/305 (3%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT + R + + +W+ + ++IGW G+L+ P A +
Sbjct: 1 MTIAIGREQERGWFDLLDDWL-KRDRFVFIGWSGILLFPCAYLALGAWFTGTTFVSSWYT 59
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117
G+ + S L G N ++ A+ + ++G +W + + W GG + L
Sbjct: 60 HGL----ASSYLEGCNFLTAAVSSPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWTFTAL 115
Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177
H G+ + R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ G++
Sbjct: 116 HGSFGLIGFCLRQFEIARLVGLRPYNAIAFSGPIAVFVSVFLLYPLGQASWFFAPSFGVA 175
Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237
F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L E E +
Sbjct: 176 AIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVENTLF-EDGEASDTFRAF 234
Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297
Q EETY++V A+ ++ ++ +F N R LHFFL PV G+W +++GI +A NL
Sbjct: 235 TPTQSEETYSMVTANRFWSQIF--GVAFANKRWLHFFLLFVPVTGLWVSSIGIVGLALNL 292
Query: 298 NGFNF 302
++F
Sbjct: 293 RAYDF 297
>gi|7524716 PSII D2 protein [Pinus thunbergii]
sp|P41644|PSBD_PINTH PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||T07549 photosystem II protein D2 - Japanese black pine chloroplast
dbj|BAA04425.1| (D17510) PSII D2 protein [Pinus thunbergii]
Length = 353
Score = 166 bits (416), Expect = 4e-40
Identities = 90/298 (30%), Positives = 160/298 (53%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
+E + L+ +W+ + +++GW G+L+ P A + G+
Sbjct: 10 KEEKTLFDTVDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + W GG + + LH G+
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDLTRWCQLGGLWTFVALHGAFGLI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++EL+ + +RP+ A+A+SAP+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE
Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 299
>gb|AAG26177.1| (AF123821) photosystem II D2 protein [Ginkgo biloba]
Length = 326
Score = 165 bits (413), Expect = 9e-40
Identities = 88/278 (31%), Positives = 153/278 (54%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A + A G+ + S L G N ++ A+ +
Sbjct: 2 VFVGWSGLLLFPCAYFALGGWFTGTTFATSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A
Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 117
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 118 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSEETYSMVTANRFWSQIF--GVA 234
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 272
>gi|11465823 Photosystem II D2 protein [Porphyra purpurea]
sp|P51357|PSBD_PORPU PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||S73278 photosystem II protein D2 - red alga (Porphyra purpurea)
chloroplast
gb|AAC08243.1| (U38804) Photosystem II D2 protein [Porphyra purpurea]
Length = 351
Score = 164 bits (411), Expect = 2e-39
Identities = 91/305 (29%), Positives = 164/305 (52%), Gaps = 11/305 (3%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT + + ++ + +W+ + +++GW G+L+ P A ++
Sbjct: 1 MTIAIGQEKTRGGFDLVDDWL-KRDRFVFVGWSGLLLFPCAYLAVGGWLTGTTFVTSWYT 59
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117
G+ + S L G N ++ A+ + ++G +W + + W GG + I L
Sbjct: 60 HGL----ASSYLEGCNFLTAAVSTPANSMGHSLLFLWGPEAQGDFTRWCQIGGLWAFIAL 115
Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177
H G+ + R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ LG++
Sbjct: 116 HGSFGLIGFCLRQFEIARLVGLRPYNAIAFSGPIAVFVSVFLMYPLGQASWFFAPSLGVA 175
Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237
F F++ Q HN ++PFHM+GVAG+ GG+L A+HG+ V ++L E + +
Sbjct: 176 AIFRFLLFLQGFHNWTLNPFHMMGVAGILGGALLCAIHGATVQNTLF-EDGDAADTFRAF 234
Query: 238 RFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNL 297
Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A GI +A NL
Sbjct: 235 TPTQSEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWTSAFGIVGLALNL 292
Query: 298 NGFNF 302
++F
Sbjct: 293 RAYDF 297
>pir||F2PMD2 photosystem II protein D2 - garden pea chloroplast
Length = 353
Score = 164 bits (411), Expect = 2e-39
Identities = 89/298 (29%), Positives = 159/298 (52%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
++ +L+ +W+ + +++GW G+L+ P A + G+
Sbjct: 10 KDQNDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + W GG + + LH G+
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDLTRWCQLGGLWTFVALHGAFGLI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE
Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299
>gi|11466698 psbD [Marchantia polymorpha]
sp|P06404|PSBD_MARPO PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||F2LVD2 photosystem II protein D2 - liverwort (Marchantia polymorpha)
chloroplast
emb|CAA28080.1| (X04465) psbD [Marchantia polymorpha]
Length = 353
Score = 164 bits (411), Expect = 2e-39
Identities = 89/298 (29%), Positives = 160/298 (52%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
+E + L+ +W+ + +++GW G+L+ P A + G+
Sbjct: 10 KEPKGLFDSMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + + W GG + + LH G+
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE
Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 299
>gb|AAG44374.1| (AF235043) photosystem II D2 protein [Amborella trichopoda]
Length = 326
Score = 164 bits (410), Expect = 2e-39
Identities = 88/278 (31%), Positives = 152/278 (54%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A + G+ + S L G N ++ A+ +
Sbjct: 2 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A
Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 117
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 118 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 234
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 272
>gb|AAG26171.1| (AF123818) photosystem II D2 protein [Cercidiphyllum japonicum]
gb|AAG26187.1| (AF123826) photosystem II D2 protein [Saururus cernuus]
Length = 325
Score = 164 bits (410), Expect = 2e-39
Identities = 88/278 (31%), Positives = 152/278 (54%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A + G+ + S L G N ++ A+ +
Sbjct: 1 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 56
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A
Sbjct: 57 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 116
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 117 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 176
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 177 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 233
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 234 FSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 271
>gb|AAG26169.1| (AF123817) photosystem II D2 protein [Ceratophyllum demersum]
Length = 325
Score = 164 bits (410), Expect = 2e-39
Identities = 88/278 (31%), Positives = 152/278 (54%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A + G+ + S L G N ++ A+ +
Sbjct: 1 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 56
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A
Sbjct: 57 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 116
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 117 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 176
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 177 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 233
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 234 FSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 271
>gi|7524799 photosystem II D2 protein [Chlorella vulgaris]
sp|P56319|PSBD_CHLVU PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||T07229 photosystem II protein D2 - Chlorella vulgaris chloroplast
dbj|BAA57876.1| (AB001684) photosystem II D2 protein [Chlorella vulgaris]
Length = 352
Score = 164 bits (410), Expect = 2e-39
Identities = 91/303 (30%), Positives = 164/303 (54%), Gaps = 11/303 (3%)
Query: 3 AILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDG 62
AI + +E L+ +W+ + +++GW G+L+ PT A + G
Sbjct: 4 AIGKTQEKRGLFDVVDDWLRR-DRFVFVGWSGLLLFPTAYLALGGWFTGTTFVTSWYTHG 62
Query: 63 IREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHF 119
+ + S L G N ++ A+ + ++G +W + + W GG + + LH
Sbjct: 63 L----ATSYLEGCNFLTAAVSTPANSMGHSLLFLWGPEAQGDFTRWCQLGGLWTFVALHG 118
Query: 120 LLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGT 179
+ +M R++E++ + +RP+ A+A+SAP++ +VFLIYP+GQ + G++
Sbjct: 119 SFALIGFMLRQFEIARSVKIRPYNAIAFSAPISVFVSVFLIYPLGQSGWFFAPSFGVAAI 178
Query: 180 FNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRF 239
F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + +
Sbjct: 179 FRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNP 237
Query: 240 GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNG 299
Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL
Sbjct: 238 TQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRA 295
Query: 300 FNF 302
++F
Sbjct: 296 YDF 298
>gb|AAG26182.1| (AF123823) photosystem II D2 protein [Illicium parviflorum]
gb|AAG26189.1| (AF123827) photosystem II D2 protein [Trochodendron aralioides]
Length = 324
Score = 163 bits (409), Expect = 3e-39
Identities = 88/277 (31%), Positives = 151/277 (53%), Gaps = 10/277 (3%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
++GW G+L+ P A + G+ + S L G N ++ A+ + +
Sbjct: 1 FVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANS 56
Query: 89 IGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145
+ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A+
Sbjct: 57 LAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAI 116
Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGV 205
A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV
Sbjct: 117 AFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGV 176
Query: 206 FGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASF 265
G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +F
Sbjct: 177 LGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAF 233
Query: 266 NNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 234 SNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 270
>emb|CAA58959.1| (X84154) D2 protein, photosystem II subunit [Antirrhinum majus]
Length = 353
Score = 163 bits (409), Expect = 3e-39
Identities = 89/298 (29%), Positives = 160/298 (52%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
++ +L+ +W+ + +++GW G+L+ P A + G+
Sbjct: 10 KDENDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + + W GG + + LH G+
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE
Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299
>gi|11465949 PSII D2 protein [Nicotiana tabacum]
sp|P06403|PSBD_TOBAC PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||F2NTD2 photosystem II protein D2 - common tobacco chloroplast
pir||S52397 photosystem II protein D2 - garden snapdragon chloroplast
emb|CAA77347.1| (Z00044) PSII D2 protein [Nicotiana tabacum]
emb|CAA58960.1| (X84155) photosystem I subunit [Antirrhinum majus]
prf||1211235V photosystem II D2 protein [Nicotiana tabacum]
Length = 353
Score = 163 bits (409), Expect = 3e-39
Identities = 89/298 (29%), Positives = 160/298 (52%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
++ +L+ +W+ + +++GW G+L+ P A + G+
Sbjct: 10 KDENDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + + W GG + + LH G+
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE
Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299
>gb|AAG26167.1| (AF123816) photosystem II D2 protein [Calycanthus floridus]
Length = 326
Score = 163 bits (408), Expect = 3e-39
Identities = 87/278 (31%), Positives = 152/278 (54%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A + G+ + S L G N ++ A+ +
Sbjct: 2 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A
Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 117
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 118 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 234
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 272
>sp|P06006|PSBD_PEA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
gb|AAB59335.1| (M27309) D2 photosystem II protein [Pisum sativum]
Length = 353
Score = 163 bits (408), Expect = 3e-39
Identities = 88/298 (29%), Positives = 160/298 (53%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
++ +L+ +W+ + +++GW G+L+ P A + G+
Sbjct: 10 KDQNDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFAVGGWFTGTTFVTSWYTHGL---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIW---EAASVDEWLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + W GG + + LH G+
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDLTRWCQLGGLWTFVALHGAFGLI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN ++PFHM+GVAGV G +L A+HG++V ++L E + + + Q EE
Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGAIVENTLF-EDGDGANTFRAFNPTQAEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R L+FF+ PV G+W +ALG+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLYFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299
>prf||1209190A photosystem II protein D2 [Chlamydomonas reinhardtii]
Length = 363
Score = 163 bits (408), Expect = 3e-39
Identities = 86/278 (30%), Positives = 153/278 (54%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A ++ G+ + S L G N ++ A+ +
Sbjct: 39 VFVGWSGLLLFPCAYFALGGWLTGTTFVTSWYTHGL----ATSYLEGCNFLTAAVSTPAN 94
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++E++ + +RP+ A
Sbjct: 95 SMAHSLLFVWGPEAQGDFTRWCQLGGLWAFVALHGAFGLIGFMLRQFEIARSVNLRPYNA 154
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 155 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 214
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 215 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 271
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 272 FSNKRWLHFFMLLVPVTGLWMSAIGVVGLALNLRAYDF 309
>sp|P06007|PSBD_CHLRE PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||A25466 photosystem II protein D2 - Chlamydomonas reinhardtii chloroplast
emb|CAA27766.1| (X04147) D2 protein (aa 1-352) [Chlamydomonas reinhardtii]
Length = 352
Score = 163 bits (408), Expect = 3e-39
Identities = 86/278 (30%), Positives = 153/278 (54%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A ++ G+ + S L G N ++ A+ +
Sbjct: 28 VFVGWSGLLLFPCAYFALGGWLTGTTFVTSWYTHGL----ATSYLEGCNFLTAAVSTPAN 83
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++E++ + +RP+ A
Sbjct: 84 SMAHSLLFVWGPEAQGDFTRWCQLGGLWAFVALHGAFGLIGFMLRQFEIARSVNLRPYNA 143
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 144 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 203
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 204 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 260
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 261 FSNKRWLHFFMLLVPVTGLWMSAIGVVGLALNLRAYDF 298
>gb|AAG26186.1| (AF123825) photosystem II D2 protein [Liriodendron tulipifera]
Length = 324
Score = 162 bits (407), Expect = 5e-39
Identities = 87/277 (31%), Positives = 151/277 (54%), Gaps = 10/277 (3%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
++GW G+L+ P A + G+ + S L G N ++ A+ + +
Sbjct: 1 FVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANS 56
Query: 89 IGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145
+ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A+
Sbjct: 57 LAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAI 116
Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGV 205
A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV
Sbjct: 117 AFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGV 176
Query: 206 FGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASF 265
G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +F
Sbjct: 177 LGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAF 233
Query: 266 NNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 234 SNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 270
>gb|AAG26180.1| (AF123822) photosystem II D2 protein [Gnetum gnemon]
Length = 323
Score = 162 bits (407), Expect = 5e-39
Identities = 89/276 (32%), Positives = 150/276 (54%), Gaps = 10/276 (3%)
Query: 30 IGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAI 89
IGW G+L+ P A + G+ + S L G N ++ A+ + ++
Sbjct: 1 IGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANSL 56
Query: 90 GLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVA 146
+W + + W GG + + LH G+ +M R++EL+ + +RP+ A+A
Sbjct: 57 AHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIA 116
Query: 147 YSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVF 206
+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV
Sbjct: 117 FSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVL 176
Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFN 266
G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +F+
Sbjct: 177 GAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAFS 233
Query: 267 NSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
N R LHFFL PV G+W +A+G+ +A NL ++F
Sbjct: 234 NKRWLHFFLLFVPVTGLWMSAIGVVGLALNLRAYDF 269
>gb|AAG26163.1| (AF123814) photosystem II D2 protein [Asarum canadense]
Length = 323
Score = 162 bits (406), Expect = 6e-39
Identities = 88/276 (31%), Positives = 150/276 (53%), Gaps = 10/276 (3%)
Query: 30 IGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAI 89
+GW G+L+ P A + G+ + S L G N ++ A+ + ++
Sbjct: 1 VGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANSL 56
Query: 90 GLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVA 146
+W + + W GG + + LH G+ +M R++EL+ + +RP+ A+A
Sbjct: 57 AHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIA 116
Query: 147 YSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVF 206
+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV
Sbjct: 117 FSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVL 176
Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFN 266
G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +F+
Sbjct: 177 GAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAFS 233
Query: 267 NSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 234 NKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 269
>gb|AAG26161.1| (AF123813) photosystem II D2 protein [Acorus calamus]
gb|AAG26184.1| (AF123824) photosystem II D2 protein [Lactoris fernandeziana]
Length = 325
Score = 162 bits (406), Expect = 6e-39
Identities = 87/278 (31%), Positives = 151/278 (54%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A + G+ + S L G N ++ A+ +
Sbjct: 1 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 56
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A
Sbjct: 57 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 116
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 117 IAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 176
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 177 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 233
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 234 FSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 271
>gb|AAF82675.1| (AF188854) photosystem II D2 protein [Nymphaea odorata]
Length = 326
Score = 162 bits (406), Expect = 6e-39
Identities = 87/278 (31%), Positives = 151/278 (54%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A + G+ + S L G N ++ A+ +
Sbjct: 2 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A
Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 117
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 118 IAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 234
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 272
>gi|11467626 PSII D2 reaction-center protein [Guillardia theta]
sp|O78427|PSBD_GUITH PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
gb|AAC35612.1| (AF041468) PSII D2 reaction-center protein [Guillardia theta]
Length = 351
Score = 162 bits (406), Expect = 6e-39
Identities = 91/307 (29%), Positives = 165/307 (53%), Gaps = 15/307 (4%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT + + E + +W+ + ++IGW G+L+ PT + + I +
Sbjct: 1 MTIAIGQEEGRGWFDLVDDWL-KRDRFVFIGWSGLLLFPT----SYLSIGGWFTGTTFVT 55
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVL 117
++ S L G N + A+ + ++G +W + + W GG + L
Sbjct: 56 SWYTHGLASSYLEGCNFFTAAVSTPANSMGHSLLLLWGPEAQGDFTRWCQIGGLWAFCAL 115
Query: 118 HFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGIS 177
H G+ + R++E++ +G+RP+ A+A+S P+A +VFL+YP+GQ S+ LG++
Sbjct: 116 HGAFGLIGFCLRQFEIARLVGIRPYNAIAFSGPIAIFVSVFLMYPLGQASWFFAPSLGVA 175
Query: 178 GTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGY 237
F F++ Q HN ++PFHM+GVAG+ G +L A+HG+ V +++ + ++AN
Sbjct: 176 AIFRFLLFIQGFHNFTLNPFHMMGVAGILGAALLCAIHGATVQNTIFE---DGDAANTFR 232
Query: 238 RF--GQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295
F Q EETY++V A+ ++ ++ +F+N R LHFF+ P+ G+W +A+GI +A
Sbjct: 233 AFTPTQSEETYSMVTANRFWSQVF--GVAFSNKRWLHFFMLFVPLAGLWTSAIGIVGLAL 290
Query: 296 NLNGFNF 302
NL ++F
Sbjct: 291 NLRAYDF 297
>dbj|BAA83458.1| (AB013682) photosystem II protein D2 [Adiantum capillus-veneris]
Length = 299
Score = 162 bits (405), Expect = 8e-39
Identities = 87/278 (31%), Positives = 151/278 (54%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ PT A + G+ + S L G N ++ A+ +
Sbjct: 6 VFVGWSGLLLFPTAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 61
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH + +M R++EL+ + +RP+ A
Sbjct: 62 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGSFALIGFMLRQFELARSVQLRPYNA 121
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
VA+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 122 VAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 181
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 182 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSEETYSMVTANRFWSQIF--GVA 238
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 239 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 276
>gb|AAD24582.1|AF134324_1 (AF134324) Qa-binding protein PsbD [Populus deltoides]
Length = 353
Score = 162 bits (405), Expect = 8e-39
Identities = 90/298 (30%), Positives = 160/298 (53%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
++ +L+ +W+ + +++GW G+L+ P A + G
Sbjct: 10 KDENDLFDIMDDWLRR-DRFVFVGWSGLLVFPCAYFALGGWFTGTTFVTSWYTHGW---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + + W GG + + LH G+
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGFWTFVALHGAFGLI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++EL+ + +RP+ A+A+SAP+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE
Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299
>gi|11497520 PSII D2 protein [Spinacia oleracea]
sp|P06005|PSBD_SPIOL PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||F2SPD2 photosystem II protein D2 [validated] - spinach chloroplast
gb|AAA84633.1| (M27308) D2 photosystem II protein [Spinacia oleracea]
gb|AAA84630.1| (M36833) 32 Kd-like protein [Spinacia oleracea]
emb|CAB88721.1| (AJ400848) PSII D2 protein [Spinacia oleracea]
Length = 353
Score = 162 bits (405), Expect = 8e-39
Identities = 88/298 (29%), Positives = 160/298 (53%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
++ ++L+ +W+ + +++GW G+L+ P A + G+
Sbjct: 10 KDEKDLFDSMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + + W GG + + LH +
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFALI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE
Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299
>gb|AAG26165.1| (AF123815) photosystem II D2 protein [Cabomba caroliniana]
Length = 326
Score = 161 bits (404), Expect = 1e-38
Identities = 86/278 (30%), Positives = 151/278 (53%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A + G+ + S L G N ++ A+ +
Sbjct: 2 VFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A
Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 117
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 118 IAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVA 234
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 272
>sp|P11849|PSBD_HORVU PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||A31183 photosystem II protein D2 - barley chloroplast
gb|AAA84047.1| (M38290) membrane polypeptide D2 [Hordeum vulgare]
Length = 353
Score = 161 bits (404), Expect = 1e-38
Identities = 91/307 (29%), Positives = 163/307 (52%), Gaps = 13/307 (4%)
Query: 1 MTAILER--RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPV 58
MT L R +E +L+ +W+ + +++GW G+L+ P A +
Sbjct: 1 MTIALGRVPKEENDLFDTMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSW 59
Query: 59 DIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELI 115
G+ + S L G N ++ A+ + ++ +W + + W GG + +
Sbjct: 60 YTHGL----ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFV 115
Query: 116 VLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLG 175
LH + +M R++EL+ + +RP+ A+++S P+A +VFLIYP+GQ + G
Sbjct: 116 ALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSGWFFAPSFG 175
Query: 176 ISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235
++ F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + +
Sbjct: 176 VAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFR 234
Query: 236 GYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295
+ Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A
Sbjct: 235 AFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLAL 292
Query: 296 NLNGFNF 302
NL ++F
Sbjct: 293 NLRAYDF 299
>sp|P10803|PSBD_SECCE PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||S03435 photosystem II protein D2 - rye chloroplast
emb|CAA31743.1| (X13366) D2 polypeptide (AA 1 - 353) [Secale cereale]
Length = 353
Score = 161 bits (404), Expect = 1e-38
Identities = 91/307 (29%), Positives = 163/307 (52%), Gaps = 13/307 (4%)
Query: 1 MTAILER--RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPV 58
MT L R +E +L+ +W+ + +++GW G+L+ P A +
Sbjct: 1 MTIALGRIPKEENDLFDTMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSW 59
Query: 59 DIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELI 115
G+ + S L G N ++ A+ + ++ +W + + W GG + +
Sbjct: 60 YTHGL----ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFV 115
Query: 116 VLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLG 175
LH + +M R++EL+ + +RP+ A+++S P+A +VFLIYP+GQ + G
Sbjct: 116 ALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSGWFFAPSFG 175
Query: 176 ISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235
++ F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + +
Sbjct: 176 VAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFR 234
Query: 236 GYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295
+ Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A
Sbjct: 235 AFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLAL 292
Query: 296 NLNGFNF 302
NL ++F
Sbjct: 293 NLRAYDF 299
>gi|7525028 PSII D2 protein [Arabidopsis thaliana]
sp|P56761|PSBD_ARATH PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
dbj|BAA84380.1| (AP000423) PSII D2 protein [Arabidopsis thaliana]
Length = 353
Score = 161 bits (403), Expect = 1e-38
Identities = 88/298 (29%), Positives = 160/298 (53%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
++ ++L+ +W+ + +++GW G+L+ P A + G+
Sbjct: 10 KDEKDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + + W GG + + LH +
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWAFVALHGAFALI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q EE
Sbjct: 185 FFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299
>pir||S00929 photosystem II protein D2 - barley chloroplast
emb|CAA30401.1| (X07522) D2 protein (psbD) (AA 1-353) [Hordeum vulgare]
Length = 353
Score = 161 bits (402), Expect = 2e-38
Identities = 91/307 (29%), Positives = 163/307 (52%), Gaps = 13/307 (4%)
Query: 1 MTAILER--RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPV 58
MT L R +E +L+ +W+ + +++GW G+L+ P A +
Sbjct: 1 MTIALGRVPKEENDLFDTMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSW 59
Query: 59 DIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELI 115
G+ + S L G N ++ A+ + ++ +W + + W GG + +
Sbjct: 60 YTHGL----ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFV 115
Query: 116 VLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLG 175
LH + +M R++EL+ + +RP+ A+++S P+A +VFLIYP+GQ + G
Sbjct: 116 ALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSDWFFPPDFG 175
Query: 176 ISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235
++ F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + +
Sbjct: 176 VAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFR 234
Query: 236 GYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295
+ Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A
Sbjct: 235 AFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLAL 292
Query: 296 NLNGFNF 302
NL ++F
Sbjct: 293 NLRAYDF 299
>gi|11466770 PSII D2 protein [Oryza sativa]
sp|P12095|PSBD_ORYSA PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||F2RZD2 photosystem II protein D2 - rice chloroplast
emb|CAA34013.1| (X15901) PSII D2 protein [Oryza sativa]
prf||1603356G photosystem II D2 protein [Oryza sativa]
Length = 353
Score = 161 bits (402), Expect = 2e-38
Identities = 91/307 (29%), Positives = 163/307 (52%), Gaps = 13/307 (4%)
Query: 1 MTAILER--RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPV 58
MT L R +E +L+ +W+ + +++GW G+L+ P A +
Sbjct: 1 MTIALGRVTKEENDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSW 59
Query: 59 DIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELI 115
G+ + S L G N ++ A+ + ++ +W + + W GG + +
Sbjct: 60 YTHGL----ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFV 115
Query: 116 VLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLG 175
LH + +M R++EL+ + +RP+ A+++S P+A +VFLIYP+GQ + G
Sbjct: 116 ALHGAFALIGFMLRQFELARSVQLRPYNAISFSGPIAVFVSVFLIYPLGQSGWFFAPSFG 175
Query: 176 ISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANE 235
++ F F++ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + +
Sbjct: 176 VAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFR 234
Query: 236 GYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAF 295
+ Q EETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A
Sbjct: 235 AFNPTQAEETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLAL 292
Query: 296 NLNGFNF 302
NL ++F
Sbjct: 293 NLRAYDF 299
>gi|11466982 PSII D2-polypeptide [Euglena gracilis]
sp|P31557|PSBD_EUGGR PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||S34495 photosystem II protein D2 - Euglena gracilis chloroplast
emb|CAA50076.1| (X70810) PSII D2-polypeptide [Euglena gracilis]
Length = 352
Score = 159 bits (398), Expect = 5e-38
Identities = 91/297 (30%), Positives = 160/297 (53%), Gaps = 10/297 (3%)
Query: 9 ESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVS 68
E++N W + + ++IGW G+L+ P A ++ G+ +
Sbjct: 9 ENKNGWFDVADDWLKKDRFIFIGWSGLLLFPCSYLALGGWLTGITFVTSWYTHGL----A 64
Query: 69 GSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAS---VDEWLYNGGPYELIVLHFLLGVAC 125
S L G N ++ A+ ++G + + + WL GG + I LH G+
Sbjct: 65 SSFLEGCNALTAAVSTPPNSMGHSLLLLLGSEAQWDFTRWLQIGGLWPFIALHGAFGLIG 124
Query: 126 YMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIV 185
+M R++E++ + +RP+ A+A+SAP++ +VFLIYP+GQ + G++ F F++
Sbjct: 125 FMLRQFEIAKAVQIRPYNAIAFSAPISVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILF 184
Query: 186 FQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEET 245
FQ HN ++PFHM+GVAGV G +L A+HG+ V +++ E ++ + + Q EET
Sbjct: 185 FQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTIF-EDGDSPNTFRAFNPLQSEET 243
Query: 246 YNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
Y++V A+ ++ ++ +F+N R LHFF+ PV G+ +ALGI +A NL ++F
Sbjct: 244 YSMVTANRFWSQIF--GVAFSNKRWLHFFMVFVPVTGLRMSALGIVGLALNLRAYDF 298
>gb|AAG26173.1| (AF123819) photosystem II D2 protein [Dioscorea bulbifera]
Length = 321
Score = 159 bits (397), Expect = 7e-38
Identities = 87/274 (31%), Positives = 148/274 (53%), Gaps = 10/274 (3%)
Query: 32 WFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGL 91
W G+L+ P A + G+ + S L G N ++ A+ + ++
Sbjct: 1 WSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPANSLAH 56
Query: 92 HFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
+W + + W GG + + LH G+ +M R++EL+ + +RP+ A+A+S
Sbjct: 57 SLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNAIAFS 116
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAGVFGG 208
AP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAGV G
Sbjct: 117 APIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAGVLGA 176
Query: 209 SLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNS 268
+L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +F+N
Sbjct: 177 ALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEETYSMVTANRFWSQIF--GVAFSNK 233
Query: 269 RSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 234 RWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 267
>gb|AAF73303.1| (AF188848) photosystem II D2 protein [Zamia furfuracea]
Length = 326
Score = 159 bits (397), Expect = 7e-38
Identities = 85/278 (30%), Positives = 150/278 (53%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+ + P A + G+ + S L G N ++ A+ +
Sbjct: 2 VFVGWSGLXLFPCAYFALGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 57
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + H G+ +M R++EL+ + +RP+ A
Sbjct: 58 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVAFHGGFGLIGFMLRQFELARSVQLRPYNA 117
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+SAP+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 118 IAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 177
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 178 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSEETYSMVTANRFWSQIF--GVA 234
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 235 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 272
>emb|CAB67144.1| (AJ271079) PSII D2 protein [Oenothera elata subsp. hookeri]
Length = 353
Score = 159 bits (397), Expect = 7e-38
Identities = 86/298 (28%), Positives = 159/298 (52%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
++ ++L+ +W+ + +++GW G+L+ P A + G+
Sbjct: 10 KDEKDLFDIMDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + + W GG + + LH +
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFALI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++E++ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFEIARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN ++PFHM+G+AGV G +L A+HG+ V +L E + + + Q EE
Sbjct: 185 FFQGFHNWTLNPFHMMGIAGVLGAALLCAIHGATVEYTLF-EDGDGANTFRAFNPTQAEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +ALG+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSALGVVGLALNLRAYDF 299
>dbj|BAA83431.1| (AB013655) photosystem II protein D2 [Physcomitrella patens]
Length = 290
Score = 158 bits (396), Expect = 9e-38
Identities = 84/278 (30%), Positives = 150/278 (53%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P + + G+ + S L G N ++ A+ +
Sbjct: 1 VFVGWSGLLLFPCAYFSLGGWFTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 56
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH + +M R++EL+ + +RP+ A
Sbjct: 57 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFALIGFMLRQFELARSVQLRPYNA 116
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+S P+A +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 117 IAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 176
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 177 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSEETYSMVTANRFWSQIF--GVA 233
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 234 FSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 271
>dbj|BAA83437.1| (AB013661) photosystem II protein D2 [Coleochaete nitellarum]
Length = 331
Score = 158 bits (395), Expect = 1e-37
Identities = 85/278 (30%), Positives = 151/278 (53%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A ++ G+ + S L G N ++ A+ +
Sbjct: 7 VFVGWSGLLLFPCAYFALGGWLTGTTFVTSWYTHGL----ASSYLEGCNFLTAAVSTPAN 62
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++EL+ + +RP+ A
Sbjct: 63 SLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRPYNA 122
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A++ P++ +VFLIYP+GQ + G++ F F++ FQ HN ++PFHM+GVAG
Sbjct: 123 IAFTGPISIFVSVFLIYPLGQSGWFFAPSFGVAAIFRFILFFQGFHNWTLNPFHMMGVAG 182
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L A+HG+ V ++L E + + + Q EETY+ V A+ ++ ++ +
Sbjct: 183 VLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQNEETYSFVTANRFWSQIF--GVA 239
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F+N R LHFF+ PV G+W +A+GI +A NL ++F
Sbjct: 240 FSNKRWLHFFMLFVPVSGLWASAIGIVGLAVNLRAYDF 277
>gi|11467176 PSII D2 protein [Zea mays]
sp|P48184|PSBD_MAIZE PHOTOSYSTEM II D2 PROTEIN (PHOTOSYSTEM Q(A) PROTEIN)
pir||S58536 photosystem II protein D2 - maize chloroplast
emb|CAA60270.1| (X86563) PSII D2 protein [Zea mays]
Length = 353
Score = 156 bits (391), Expect = 3e-37
Identities = 87/298 (29%), Positives = 157/298 (52%), Gaps = 11/298 (3%)
Query: 8 RESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPV 67
+E +L+ +W+ + +++GW G+L+ P A + G+
Sbjct: 10 KEENDLFPLIDDWLRR-DRFVFVGWSGLLLFPCAYFALGGWFTGTTFVTSWYTHGL---- 64
Query: 68 SGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVA 124
+ S L G N ++ A+ + ++ +W + + W GG + + LH +
Sbjct: 65 ASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWSQLGGLWTFLALHGAFALI 124
Query: 125 CYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI 184
+M R++EL+ + +RP+ A+++S P+A +VFLIYP+GQ + G++ F F++
Sbjct: 125 GFMLRQFELARPVQLRPYNAISFSGPIAVFLSVFLIYPLGQSGWFFSPSFGVAAIFRFIL 184
Query: 185 VFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEE 244
FQ HN + PFHM+GVAGV G L A+HG+ V ++L E + + + Q EE
Sbjct: 185 FFQGFHNWTLKPFHMMGVAGVLGAVLLCAIHGATVENTLF-EDGDGANTFRAFNPTQAEE 243
Query: 245 TYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
TY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 244 TYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 299
>gb|AAG26175.1| (AF123820) photosystem II D2 protein [Drimys winteri]
Length = 319
Score = 156 bits (390), Expect = 4e-37
Identities = 79/239 (33%), Positives = 138/239 (57%), Gaps = 6/239 (2%)
Query: 67 VSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGV 123
++ S L G N ++ A+ + ++ +W + + W GG + + LH G+
Sbjct: 30 LASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGL 89
Query: 124 ACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM 183
+M R++EL+ + +RP+ A+A+S P+A +VFLIYP+GQ + G++ F F+
Sbjct: 90 IGFMLRQFELARSVQLRPYNAIAFSGPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFI 149
Query: 184 IVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEE 243
+ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q E
Sbjct: 150 LFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQAE 208
Query: 244 ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
ETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 209 ETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 265
>dbj|BAA83448.1| (AB013672) photosystem II protein D2 [Sphagnum fallax]
Length = 278
Score = 155 bits (389), Expect = 6e-37
Identities = 79/239 (33%), Positives = 138/239 (57%), Gaps = 6/239 (2%)
Query: 67 VSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGV 123
++ S L G N ++ A+ + ++ +W + + W GG + + LH +
Sbjct: 28 LASSYLEGCNFLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFAL 87
Query: 124 ACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM 183
+M R++EL+ + +RP+ A+A+SAP+A +VFLIYP+GQ + G++ F F+
Sbjct: 88 IGFMLRQFELARSVQLRPYNAIAFSAPIAVFVSVFLIYPLGQSGWFFAPSFGVAAIFRFI 147
Query: 184 IVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEE 243
+ FQ HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q E
Sbjct: 148 LFFQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSE 206
Query: 244 ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
ETY++V A+ ++ ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 207 ETYSMVTANRFWSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 263
>gb|AAD10228.1| (U72055) photosystem II protein D1 [Anabaena sp. CA]
Length = 95
Score = 155 bits (387), Expect = 1e-36
Identities = 69/95 (72%), Positives = 83/95 (86%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MT L++R++ N+W RFC WITST+NR+Y+GWFGVLMIPTLL AT F+IAFIAAP VDI
Sbjct: 1 MTTTLQQRQNANVWERFCEWITSTDNRIYVGWFGVLMIPTLLAATVCFVIAFIAAPLVDI 60
Query: 61 DGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYP 95
DGIREPV+GSL+ GNNII GA++P+S AIGLHFYP
Sbjct: 61 DGIREPVAGSLICGNNIICGAVVPSSNAIGLHFYP 95
>dbj|BAA83453.1| (AB013677) photosystem II protein D2 [Haplomitrium mnioides]
Length = 280
Score = 148 bits (369), Expect = 1e-34
Identities = 76/239 (31%), Positives = 135/239 (55%), Gaps = 6/239 (2%)
Query: 67 VSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGV 123
++ S L G N ++ A+ + ++ +W + + W GG + + LH G+
Sbjct: 29 LASSYLEGCNSLTAAVSTPANSLAHSLLLLWGPEAQGDFTRWCQLGGLWTFVALHGAFGL 88
Query: 124 ACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM 183
+M R++EL+ + +RP+ A+A+S P+A +VF I+P+GQ + G++ F F+
Sbjct: 89 IGFMPRQFELARSVQLRPYNAIAFSGPIAVFVSVFPIHPLGQSGWFFAPSFGVAAIFRFI 148
Query: 184 IVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEE 243
+ Q HN ++PFHM+GVAGV G +L A+HG+ V ++L E + + + Q E
Sbjct: 149 LFLQGFHNWTLNPFHMMGVAGVLGAALLCAIHGATVENTLF-EDGDGANTFRAFNPTQSE 207
Query: 244 ETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
ETY++V A+ + ++ +F+N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 208 ETYSMVTANRFRSQIF--GVAFSNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 264
>dbj|BAA83443.1| (AB013667) photosystem II protein D2 [Anthoceros punctatus]
Length = 314
Score = 146 bits (364), Expect = 5e-34
Identities = 81/278 (29%), Positives = 147/278 (52%), Gaps = 10/278 (3%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+++GW G+L+ P A + G+ + S L G N ++ A+ +
Sbjct: 5 VFVGWSGLLLFPCAYFALGGWFTGTTFVSSRYTHGL----ASSYLEGCNFLTAAVSTSVN 60
Query: 88 AIGLHFYPIWEAASVDE---WLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIA 144
++ +W + + W GG + + LH G+ +M R++EL+ + +R + A
Sbjct: 61 SLAHFLLLLWGPEAQGDFTCWCQLGGLWTFVALHGAFGLIGFMLRQFELARSVQLRLYNA 120
Query: 145 VAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMHPFHMLGVAG 204
+A+S P+A +VFLIYP+GQ + + G++ F++ FQ HN ++ FHM+GVAG
Sbjct: 121 IAFSGPIAVFVSVFLIYPLGQSGWFFALSFGVAAISRFILFFQGFHNWTLNLFHMMGVAG 180
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYAS 264
V G +L ++G+ V ++L E + + + Q EETY++V A+ ++ ++ +
Sbjct: 181 VLGVALLCVIYGATVENTLF-EDGDGANTFRAFNPTQSEETYSMVTANRFWSQIF--GVA 237
Query: 265 FNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGFNF 302
F N R LHFF+ PV G+W +A+G+ +A NL ++F
Sbjct: 238 FPNKRWLHFFMLFVPVTGLWMSAIGVVGLALNLRAYDF 275
>gb|AAA84105.1| (M19053) thylakoid membrane protein [Chenopodium album]
Length = 69
Score = 144 bits (360), Expect = 1e-33
Identities = 69/69 (100%), Positives = 69/69 (100%)
Query: 212 SAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL 271
SAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL
Sbjct: 1 SAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSRSL 60
Query: 272 HFFLAAWPV 280
HFFLAAWPV
Sbjct: 61 HFFLAAWPV 69
>sp|P12463|PSBA_WHEAT PHOTOSYSTEM Q(B) PROTEIN (32 KD THYLAKOID MEMBRANE PROTEIN)
(PHOTOSYSTEM II PROTEIN D1)
pir||JA0146 photosystem II protein D1 - wheat chloroplast (fragment)
gb|AAA84729.1| (M21352) 32 kd protein (psbA) [Triticum aestivum]
Length = 70
Score = 143 bits (356), Expect = 4e-33
Identities = 68/70 (97%), Positives = 69/70 (98%)
Query: 1 MTAILERRESENLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
MTAILERRES +LWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI
Sbjct: 1 MTAILERRESTSLWGRFCNWITSTENRLYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDI 60
Query: 61 DGIREPVSGS 70
DGIREPVSGS
Sbjct: 61 DGIREPVSGS 70
>gb|AAB29963.1| photosystem II core D1 protein {Ala251Val substitution, secondary
quinone electron acceptor pocket} [Synechocystis, PCC
6714, M35, metribuzin-resistant, Peptide Partial Mutant,
65 aa]
Length = 65
Score = 114 bits (282), Expect = 2e-24
Identities = 58/68 (85%), Positives = 60/68 (87%), Gaps = 3/68 (4%)
Query: 210 LFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSR 269
LFSAMHGSLVTSSL+RETTE ES N GY+FGQEEETYNIVA H GRLIFQYASFNNSR
Sbjct: 1 LFSAMHGSLVTSSLVRETTEVESQNYGYKFGQEEETYNIVAVH---GRLIFQYASFNNSR 57
Query: 270 SLHFFLAA 277
SLHFFL A
Sbjct: 58 SLHFFLGA 65
>gb|AAB29962.1| photosystem II core D1 protein {Ile248Thr substitution, secondary
quinone electron acceptor pocket} [Synechocystis, PCC
6714, M30, metribuzin-resistant, Peptide Partial Mutant,
65 aa]
Length = 65
Score = 113 bits (281), Expect = 3e-24
Identities = 58/68 (85%), Positives = 60/68 (87%), Gaps = 3/68 (4%)
Query: 210 LFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNNSR 269
LFSAMHGSLVTSSL+RETTE ES N GY+FGQEEETYN VAAH GRLIFQYASFNNSR
Sbjct: 1 LFSAMHGSLVTSSLVRETTEVESQNYGYKFGQEEETYNTVAAH---GRLIFQYASFNNSR 57
Query: 270 SLHFFLAA 277
SLHFFL A
Sbjct: 58 SLHFFLGA 65
>pir||S09188 photosystem II 32K protein - spinach (fragments)
Length = 88
Score = 103 bits (255), Expect = 3e-21
Identities = 51/73 (69%), Positives = 56/73 (75%)
Query: 195 HPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGY 254
HPFHMLGVAGVFGGSLFSA HGSLVTSSLIRETTENESANEGYRFGQEE T+ +
Sbjct: 1 HPFHMLGVAGVFGGSLFSANHGSLVTSSLIRETTENESANEGYRFGQEENTWADIINRAN 60
Query: 255 FGRLIFQYASFNN 267
G + + +N
Sbjct: 61 LGMEVMHERNAHN 73
Score = 83.5 bits (203), Expect = 4e-15
Identities = 38/43 (88%), Positives = 40/43 (92%)
Query: 311 GRVINTWADIINRANLGMEVMHERNAHNFPLDLAAVEAPSING 353
G+ NTWADIINRANLGMEVMHERNAHNFPLDLAA+EAPS NG
Sbjct: 46 GQEENTWADIINRANLGMEVMHERNAHNFPLDLAAIEAPSTNG 88
>dbj|BAB19668.1| (AB028938) photosynthetic reaction center M subunit [Roseateles
depolymerans]
Length = 326
Score = 68.3 bits (164), Expect = 1e-10
Identities = 48/193 (24%), Positives = 86/193 (43%), Gaps = 21/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+GW G+ + I FIA + ++ + + + + A+ P
Sbjct: 51 IYLGWLGLCSL----------ICGFIAIEIIGLNMLASVNWNPIQFVRQLPWLALEPPPP 100
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
A GLH P L GG + L L + + R + + +LGM +A A+
Sbjct: 101 ANGLHLPP----------LNQGGWWLLAGLFLTTSILLWWVRMYRRARKLGMGTHVAWAF 150
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
+A + + +I P+ GSF + +P GI ++ F + N+ +PFHML + ++
Sbjct: 151 AAAIWLYLVLGIIRPVLMGSFGEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHMLSIVFLY 210
Query: 207 GGSLFSAMHGSLV 219
G +L AMHG+ +
Sbjct: 211 GSTLLFAMHGATI 223
>dbj|BAA34815.1| (AB020599) photosynthetic reaction center L subunit [Porphyrobacter
tepidarius]
Length = 245
Score = 64.8 bits (155), Expect = 2e-09
Identities = 56/219 (25%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV L T++ A P ++ I +I P
Sbjct: 2 YVGFFGVTTAIAALLGTALIFAAATQGPTLNPWLI-----------------SINPPPVE 44
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL F P+ E GG +++I + ++ ++ R+ E+S +LGM + +A+S
Sbjct: 45 YGLAFAPLKE----------GGYWQVITICAVIAFGSWVMRQAEISRKLGMSYHVPIAFS 94
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207
V A + +I P+ G++++G P GI ++ V A N +P HML + F
Sbjct: 95 VAVFAYVTLNVIRPVWMGAWANGFPYGIWTHLVWVSNVGYAFGNFHYNPVHMLAITFFFT 154
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
L A+HG LV S++ N + + + E+TY
Sbjct: 155 NCLALALHGGLVLSAV------NPTGGTDVKSPEYEDTY 187
>dbj|BAA25722.1| (AB011074) photosynthetic reaction center L subunit [Agrobacterium
sanguineum]
Length = 245
Score = 64.4 bits (154), Expect = 2e-09
Identities = 56/219 (25%), Positives = 97/219 (43%), Gaps = 34/219 (15%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV + L T++ A P ++ I +I P S
Sbjct: 2 YVGFFGVTTAISALLGTALIFAAAAQGPTLNPWLI-----------------SINPPSIE 44
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL F P+ E GG +++I ++ + ++ R+ E+S +LGM + +A+
Sbjct: 45 AGLAFAPLSE----------GGYWQVITACAVVAFSSWVLRQAEISRKLGMSYHVPIAFG 94
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207
V A + +I P+ G++ +G P GI +++ V A N +P HML + F
Sbjct: 95 VAVFAYVTLNVIRPLWMGAWGNGFPYGIWTHLDWVSNVGYAFGNFHYNPVHMLAITFFFT 154
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
L A+HG LV S++ N + + + E+TY
Sbjct: 155 NCLALALHGGLVLSAV------NPTGGTDVKTPEYEDTY 187
>sp|O66141|RCEL_ACIOR REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L
SUBUNIT)
dbj|BAA25565.1| (AB005222) L subunit of photosynthetic reaction center complex
[Acidiphilium organovorum]
Length = 254
Score = 64.0 bits (153), Expect = 3e-09
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV ++ T++ I P +I I +I P +
Sbjct: 7 YVGFFGVTAAFFIMLGTALIIWGAALGPTWNIWQI-----------------SIAPPDLS 49
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P L GG +++I + + + RE E+S +LG+ + A+S
Sbjct: 50 YGLGLAP----------LAKGGLWQIITVCAIGAFGSWALREVEISRKLGIGLHVPAAFS 99
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207
+ A + +I P+ G++ +G P GI +++ A N +P HM+ V F
Sbjct: 100 VAIFAYVTLEVIRPLLMGAWGNGFPYGIMSHLDWVSNTGYAYLNFEYNPMHMVAVTLFFT 159
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+L A+HGSLV +++ N A E +F + E+T+
Sbjct: 160 TTLALALHGSLVLAAI------NPPAGETVKFAEHEDTF 192
>sp|O66139|RCEL_ACIMU REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L
SUBUNIT)
dbj|BAA25563.1| (AB005221) L subunit of photosynthetic reaction center complex
[Acidiphilium multivorum]
Length = 255
Score = 64.0 bits (153), Expect = 3e-09
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV ++ T++ I P +I I +I P +
Sbjct: 8 YVGFFGVTAAFFIMLGTALIIWGAALGPTWNIWQI-----------------SIAPPDLS 50
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P L GG +++I + + + RE E+S +LG+ + A+S
Sbjct: 51 YGLGLAP----------LAKGGLWQIITVCAIGAFGSWALREVEISRKLGIGLHVPAAFS 100
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207
+ A + +I P+ G++ +G P GI +++ A N +P HM+ V F
Sbjct: 101 VAIFAYVTLEVIRPLLMGAWGNGFPYGIMSHLDWVSNTGYAYLNFEYNPMHMVAVTLFFT 160
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+L A+HGSLV +++ N A E +F + E+T+
Sbjct: 161 TTLALALHGSLVLAAI------NPPAGETVKFAEHEDTF 193
>sp|O66137|RCEL_ACICY REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L
SUBUNIT)
dbj|BAA25561.1| (AB005220) L subunit of photosynthetic reaction center complex
[Acidiphilium cryptum]
Length = 252
Score = 64.0 bits (153), Expect = 3e-09
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV ++ T++ I P +I I +I P +
Sbjct: 5 YVGFFGVTAAFFIMLGTALIIWGAALGPTWNIWQI-----------------SIAPPDLS 47
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P L GG +++I + + + RE E+S +LG+ + A+S
Sbjct: 48 YGLGLAP----------LAKGGLWQIITVCAIGAFGSWALREVEISRKLGIGLHVPAAFS 97
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207
+ A + +I P+ G++ +G P GI +++ A N +P HM+ V F
Sbjct: 98 VAIFAYVTLEVIRPLLMGAWGNGFPYGIMSHLDWVSNTGYAYLNFEYNPMHMVAVTLFFT 157
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+L A+HGSLV +++ N A E +F + E+T+
Sbjct: 158 TTLALALHGSLVLAAI------NPPAGETVKFAEHEDTF 190
>dbj|BAA96516.1| (AB035570) L subunit of photosynthetic reaction center
[Erythrobacter longus]
Length = 278
Score = 63.6 bits (152), Expect = 4e-09
Identities = 57/222 (25%), Positives = 94/222 (41%), Gaps = 40/222 (18%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVD---IDGIREPVSGSLLYGNNIISGAIIPT 85
Y+G+FGVL+ + T + A A P ++ ID I P
Sbjct: 31 YVGFFGVLVAISAALGTMLIFAAAAAGPTLNPWLID--------------------IQPP 70
Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145
+ GL F P+ E GG +++I L ++ ++ R+ E+S +LGM + +
Sbjct: 71 AIEAGLAFAPLNE----------GGYHQIITLCAVIAFGSWVLRQAEISRKLGMGYHVPI 120
Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAG 204
A+S V A + +I P G++ P GI +++ + N +P HML +
Sbjct: 121 AFSVAVFAFVTLNIIRPFWMGAWGHAFPYGIWSHLDWVSYTGYNYVNFHYNPVHMLAITF 180
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
F L A+HG LV S++ N R + E+TY
Sbjct: 181 FFTNCLALALHGGLVLSAV------NVGKGNEVRSPEYEDTY 216
>dbj|BAA32995.1| (AB015708) photosynthetic reaction center L subunit [Erythrobacter
sp.]
Length = 249
Score = 63.6 bits (152), Expect = 4e-09
Identities = 58/222 (26%), Positives = 97/222 (43%), Gaps = 40/222 (18%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVD---IDGIREPVSGSLLYGNNIISGAIIPT 85
Y+G+FGVL+ + L T + A I P ++ ID I P
Sbjct: 2 YVGFFGVLVAISALLGTMLIFAAAIEGPTLNPWLID--------------------IQPP 41
Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145
+ + GL P+ E GG +++I ++ + ++ R+ E+S +LGM I +
Sbjct: 42 AESYGLGLAPLSE----------GGYWQVITACAIVAFSSWVLRQAEISRKLGMSLHIPI 91
Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAG 204
A+S V A + +I P+ G++ G P GI +++ N +P HML +
Sbjct: 92 AFSFAVFAYFTLVVIRPVWMGAWYHGFPYGIWSHLDWVSNTGYMYANFHYNPVHMLAITF 151
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
F L A+HG LV S++ N S + + E+TY
Sbjct: 152 FFTNCLALALHGGLVLSAV------NPSDGTDVKTPEYEDTY 187
>dbj|BAA22646.1| (D50651) photosynthetic reaction center M subunit [Rhodocyclus
tenuis]
Length = 257
Score = 63.6 bits (152), Expect = 4e-09
Identities = 48/193 (24%), Positives = 85/193 (43%), Gaps = 21/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
LY+G+ GV + + FIA + ++ + + + + A+ P A
Sbjct: 51 LYLGFTGVASL----------VCGFIAIEIIGLNMAAQVGWSPMEFVRQLPWLALEPPPA 100
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
GL F P L GG + + L + + R + + LGM +A A+
Sbjct: 101 KYGLSFPP----------LAKGGWWLMAGFFLTLSILLFWVRTYRRAVALGMGTHVAWAF 150
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
++ + + I P+ GS+S+ +P GI ++ F + N+ PFHML +A ++
Sbjct: 151 ASAIWLYLVLGFIRPVMMGSWSEAVPFGIFAHLDWTAAFSIRYGNLYYDPFHMLSIAFMY 210
Query: 207 GGSLFSAMHGSLV 219
G +L AMHG+ V
Sbjct: 211 GATLLFAMHGATV 223
>sp|P11695|RCEL_CHLAU REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L
SUBUNIT)
pir||WNJXL photosynthetic reaction center chain L - Chloroflexus aurantiacus
emb|CAA33102.1| (X14979) reaction center protein [Chloroflexus aurantiacus]
prf||1703253A photosyn reaction center L [Chloroflexus aurantiacus]
Length = 311
Score = 63.6 bits (152), Expect = 4e-09
Identities = 60/260 (23%), Positives = 109/260 (41%), Gaps = 29/260 (11%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G++G + + ++ + +I I P I N +G I P
Sbjct: 65 YVGFWGFVSVIGIIFGSYFYINETILKGPYSIP-------------QNFFAGRIDPPPPE 111
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
+GL F E G +++ VL + +M R+ ++S +L M + +A+
Sbjct: 112 LGLGFAAPGEP---------GFAWQMTVLFATIAFFGWMMRQVDISMKLDMGYHVPIAFG 162
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHN-ILMHPFHMLGVAGVFG 207
+A + +I PI G + +G LGI +++ F +N +PFH +G+ G+F
Sbjct: 163 VAFSAWLVLQVIRPIALGMWHEGFVLGIMPHLDWVSNFGYRYNNFFYNPFHAIGITGLFA 222
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYFGRLIFQYASFNN 267
+ A HGSL+ S+ + E + F ++ + Y++ + + IF
Sbjct: 223 STWLLACHGSLILSA--AQYRGPEGGDIENVFFRDVQYYSVGESGVHRLGYIFAIGGI-L 279
Query: 268 SRSLHFFLAAWPV---VGIW 284
S L L+ WPV V W
Sbjct: 280 SADLCILLSGWPVQDWVSFW 299
>dbj|BAA22639.1| (D50648) photosynthetic reaction center L subunit [Erythrobacter
longus]
Length = 280
Score = 62.8 bits (150), Expect = 6e-09
Identities = 57/222 (25%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVD---IDGIREPVSGSLLYGNNIISGAIIPT 85
Y+G+FGVL+ + T + A A P ++ ID I P
Sbjct: 10 YVGFFGVLVAISAALGTMLIFAAAAAGPTLNPWLID--------------------IQPP 49
Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145
+ GL F P+ E GG +++I L ++ ++ R+ E+S +LGM + +
Sbjct: 50 AIEAGLAFAPLNE----------GGYHQIITLCAVIAFGSWVLRQAEISRKLGMGYHVPI 99
Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAG 204
A+S V A + +I P G++ P GI +++ + N +P HML +
Sbjct: 100 AFSVAVFAFVTLNIIRPFWMGAWGHAFPYGIWSHLDWVSYTGYNYVNFHYNPVHMLAITF 159
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
F L A HG LV S++ N R + E+TY
Sbjct: 160 FFTNCLALAXHGGLVLSAV------NVGKGXAVRSPEYEDTY 195
>dbj|BAA25901.1| (AB010873) photosynthetic reaction center L subunit
[Erythromicrobium ramosum]
Length = 244
Score = 62.5 bits (149), Expect = 8e-09
Identities = 55/219 (25%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV + L T + A P ++ I +I P
Sbjct: 1 YVGFFGVTTAISALLGTMLIFAAATQGPTLNPWLI-----------------SINPPPVE 43
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P+ + GG +++I ++ ++ R+ E+S +LGM + +A+S
Sbjct: 44 YGLSLAPMAQ----------GGYWQIITCCAVVAFVSWVLRQAEISRKLGMSYHVPIAFS 93
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207
V A ++ +I P+ G++ +G P GI ++ V A N +P HML ++ F
Sbjct: 94 VAVFAYVSLNVIRPLWMGAWGNGFPYGIWTHLEWVSNVGYAFGNFHYNPVHMLAISFFFT 153
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+L A+HG LV S++ N S + + E+TY
Sbjct: 154 NALALALHGGLVLSAV------NPSGGTDVKSPEYEDTY 186
>dbj|BAA32999.1| (AB015710) photosynthetic reaction center L subunit [Erythrobacter
sp.]
Length = 244
Score = 61.3 bits (146), Expect = 2e-08
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 82 IIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRP 141
I P S GL F P+ E GG +++I + ++ + ++ R+ E+S +LGM
Sbjct: 33 IQPPSIEAGLSFAPLSE----------GGYWQVITICAVVAFSSWVMRQAEISRKLGMNY 82
Query: 142 WIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHML 200
+ +A++ V A + +I P+ G++ G P GI +++ + N +P HM+
Sbjct: 83 HVPIAFAVAVFAYVTLNVIRPVWMGAWGHGFPYGIWSHLDWVSYTGYNYVNFHYNPVHMI 142
Query: 201 GVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+ F L A+HG LV S++ N R + E+TY
Sbjct: 143 AITFFFTNCLALALHGGLVLSAV------NVGKGNEVRSPEYEDTY 182
>dbj|BAA32997.1| (AB015709) photosynthetic reaction center L subunit [Erythrobacter
sp.]
Length = 245
Score = 61.3 bits (146), Expect = 2e-08
Identities = 44/166 (26%), Positives = 78/166 (46%), Gaps = 17/166 (10%)
Query: 82 IIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRP 141
I P S GL F P+ E GG +++I + ++ + ++ R+ E+S +LGM
Sbjct: 34 IQPPSIEAGLSFAPLSE----------GGYWQVITICAVVAFSSWVMRQAEISKKLGMNY 83
Query: 142 WIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHML 200
+ +A++ V A + +I P+ G++ G P GI +++ + N +P HM+
Sbjct: 84 HVPIAFAVAVFAYVTLNVIRPVWMGAWGHGFPYGIWSHLDWVSYTGYNYVNFHYNPVHMI 143
Query: 201 GVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+ F L A+HG LV S++ N R + E+TY
Sbjct: 144 AITFFFTNCLALALHGGLVLSAV------NVGKGNEVRSPEYEDTY 183
>dbj|BAA78672.1| (AB027515) photosynthetic reaction center L subunit [Erythrobacter
sp. MBIC3960]
Length = 278
Score = 60.9 bits (145), Expect = 2e-08
Identities = 57/222 (25%), Positives = 94/222 (41%), Gaps = 40/222 (18%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVD---IDGIREPVSGSLLYGNNIISGAIIPT 85
Y+G+FGV + L T++ A I P ++ ID I P
Sbjct: 31 YVGFFGVTAAISALLGTALIFAAAIEGPTLNPWLID--------------------IQPP 70
Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145
+ GL P+ E GG +++I L+ ++ R+ E+S +LGM +
Sbjct: 71 ALENGLGLAPLSE----------GGYWQIITACALVAFGSWVLRQAEISRKLGMTLHVPF 120
Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAG 204
A+S V A + +I P+ G++ G P GI +++ N +P HML +A
Sbjct: 121 AFSVAVFAYFTLVVIRPVWMGAWYHGFPYGIWSHLDWVSNTGYMYANFHYNPVHMLAIAF 180
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
F L A+HG LV S++ N + + + E+TY
Sbjct: 181 FFTNCLALALHGGLVLSAV------NTTGGTDVKTPEYEDTY 216
>sp|P51763|RCEM_CHRVI REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTHETIC REACTION CENTER M
SUBUNIT)
dbj|BAA32741.1| (AB011811) M subunit of reaction center complex [Allochromatium
vinosum]
Length = 325
Score = 60.9 bits (145), Expect = 2e-08
Identities = 46/193 (23%), Positives = 90/193 (45%), Gaps = 21/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+G+ G L I + ++FII F VD + I+ + + + P +
Sbjct: 51 IYLGFTGTLSI--IFGFMAIFIIGFNMLASVDWNIIQ--------FVKHFFWLGLEPPAP 100
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
GL P+ E GG + + + + + R ++ + LGM ++ A+
Sbjct: 101 QYGLTIPPLSE----------GGWWLMAGFFLTMSILLWWVRTYKRAEALGMSQHLSWAF 150
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
+A + ++ I P+ GS+++ +P GI ++ F + N+ +PFHML +A ++
Sbjct: 151 AAAIFFYLSLGFIRPVMMGSWAEAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLY 210
Query: 207 GGSLFSAMHGSLV 219
G +L AMHG+ +
Sbjct: 211 GSALLFAMHGATI 223
>dbj|BAA25903.1| (AB011073) photosynthetic reaction center L subunit [Porphyrobacter
neustonensis]
Length = 246
Score = 60.1 bits (143), Expect = 4e-08
Identities = 54/219 (24%), Positives = 94/219 (42%), Gaps = 34/219 (15%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV + L T + A P ++ I +I P
Sbjct: 3 YVGFFGVTTAISALLGTMLIFAAATQGPTLNPWLI-----------------SINPPPVE 45
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P L GG +++I ++ + ++ R+ E+S +LGM + +A++
Sbjct: 46 YGLSLAP----------LAQGGYWQIITCCAVIAFSSWVLRQAEISRKLGMSYHVPIAFA 95
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207
V A ++ +I P+ G++ +G P GI ++ V A N +P HML + F
Sbjct: 96 VAVFAYVSLNVIRPLWMGAWGNGFPYGIWTHLEWVSNVGYAFGNFHYNPVHMLAITFFFT 155
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
L A+HG LV S++ N + + + E+TY
Sbjct: 156 NCLALALHGGLVLSAV------NPTRGTDVKTPEYEDTY 188
>pir||T10820 photosynthetic reaction center L - Rhodospirillum photometricum
(fragment)
dbj|BAA09329.1| (D50681) photosynthetic reaction center L subunit [Rhodospirillum
photometricum]
Length = 255
Score = 59.7 bits (142), Expect = 5e-08
Identities = 47/167 (28%), Positives = 77/167 (45%), Gaps = 19/167 (11%)
Query: 82 IIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRP 141
I P + GL F P L GG ++LI + + C+ R+ E++ +LGM
Sbjct: 46 IAPPDLSYGLGFAP----------LMKGGLWQLITICAIGRFCCWALRQVEIARKLGMGL 95
Query: 142 WIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHM 199
I A+S + A A+ +I P+ G++ G P GI +++ I +Q H +P HM
Sbjct: 96 HIPFAFSFAIFAYLALVVIRPLLLGAWGHGXPYGILSHLDWVSNIGYQFLH-FHYNPAHM 154
Query: 200 LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+G+ F + MHGS++ S L N E + + E T+
Sbjct: 155 IGITFFFTNCMAFGMHGSIILSVL------NPGKGEKVKGSEHENTF 195
>sp|P51750|RCEL_RHOPH REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L
SUBUNIT)
Length = 255
Score = 59.7 bits (142), Expect = 5e-08
Identities = 47/167 (28%), Positives = 77/167 (45%), Gaps = 19/167 (11%)
Query: 82 IIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRP 141
I P + GL F P L GG ++LI + + C+ R+ E++ +LGM
Sbjct: 46 IAPPDLSYGLGFAP----------LMKGGLWQLITICAIGRFCCWALRQVEIARKLGMGL 95
Query: 142 WIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHM 199
I A+S + A A+ +I P+ G++ G P GI +++ I +Q H +P HM
Sbjct: 96 HIPFAFSFAIFAYLALVVIRPLLLGAWGHGXPYGILSHLDWVSNIGYQFLH-FHYNPAHM 154
Query: 200 LGVAGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+G+ F + MHGS++ S L N E + + E T+
Sbjct: 155 IGITFFFTNCMAFGMHGSIILSVL------NPGKGEKVKGSEHENTF 195
>gb|AAA84544.1| (M16865) psbA peptide [Pisum sativum]
Length = 27
Score = 59.7 bits (142), Expect = 5e-08
Identities = 27/27 (100%), Positives = 27/27 (100%)
Query: 327 GMEVMHERNAHNFPLDLAAVEAPSING 353
GMEVMHERNAHNFPLDLAAVEAPSING
Sbjct: 1 GMEVMHERNAHNFPLDLAAVEAPSING 27
>sp|P10718|RCEM_RHORU REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTHETIC REACTION CENTER M
SUBUNIT)
pir||B28170 reaction center protein chain M - Rhodospirillum rubrum
gb|AAA26465.1| (J03731) photoreaction center M subunit [Rhodospirillum rubrum]
Length = 306
Score = 59.7 bits (142), Expect = 5e-08
Identities = 45/193 (23%), Positives = 83/193 (42%), Gaps = 21/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+G GVL + + F A + + + + +G + P +A
Sbjct: 50 IYLGTTGVLSL----------VFGFFAIEIIGFNLLASVNWSPMEFGRQFFWLGLEPPAA 99
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
GL F P+ E GG +++ + + R + + L M A A+
Sbjct: 100 EYGLGFAPLAE----------GGWWQIAGFFLTTSILLWWVRMYRRARALKMGTHTAWAF 149
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
++ + ++ I P+ G+FS+ +P GI + F + N +PFHML +A ++
Sbjct: 150 ASAIFLFLSLGFIRPLLMGNFSESVPFGIFPHLEWTNSFSLNYGNFFYNPFHMLSIAFLY 209
Query: 207 GGSLFSAMHGSLV 219
G +L SAMHG+ +
Sbjct: 210 GSALLSAMHGATI 222
>dbj|BAA87900.1| (AB018690) photosynthetic reaction center M subunit [alpha
proteobacterium MBIC3951]
Length = 254
Score = 59.3 bits (141), Expect = 7e-08
Identities = 40/140 (28%), Positives = 67/140 (47%), Gaps = 11/140 (7%)
Query: 81 AIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMR 140
A+ P S GL P L +GG Y + L+ V+C+ R + L+ + M
Sbjct: 98 ALEPPSPEYGLRMPP----------LNDGGWYIISSFFLLVSVSCWWLRTYSLAEQHKMG 147
Query: 141 PWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHM 199
+A A++A + + L PI GS+S+ +P GI ++ F + N+ +PFH
Sbjct: 148 KHVAWAFAAAIWLFLVLGLFRPILMGSWSEAVPYGIFPHLDWTTAFSIRYGNLYYNPFHG 207
Query: 200 LGVAGVFGGSLFSAMHGSLV 219
L + ++G L AMHG+ +
Sbjct: 208 LSIVFLYGSVLLFAMHGATI 227
>dbj|BAA25551.1| (AB005218) L subunit of photosynthetic reaction center complex
[Acidiphilium rubrum]
dbj|BAA25558.1| (AB005219) L subunit of photosynthetic reaction center complex
[Acidiphilium angustum]
Length = 278
Score = 59.3 bits (141), Expect = 7e-08
Identities = 54/219 (24%), Positives = 96/219 (43%), Gaps = 34/219 (15%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV+ L T++ I P +I I I P +
Sbjct: 31 YVGFFGVIGGFFTLLGTALIIWGAAIGPTWNIWQIN-----------------IAPPDLS 73
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL F P L +GG +++I + + + + RE E+S +LG+ + A+S
Sbjct: 74 YGLGFAP----------LAHGGLWQIITICAVGSFSSWALREVEISRKLGIGLHVPAAFS 123
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFG 207
+ A + +I P+ G++ G P GI +++ + N +P HM+ V F
Sbjct: 124 VAIFAYVTLEVIRPLLMGAWGVGFPYGIMSHLDWVSNTGYNYINFEYNPMHMVAVTLFFT 183
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+ A+HGSLV +++ N + E +F + E+T+
Sbjct: 184 TTFALALHGSLVLAAI------NPAKGEVVKFTEHEDTF 216
>sp|P51761|RCEM_RHOGE REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTHETIC REACTION CENTER M
SUBUNIT)
pir||F49964 photosynthetic reaction center complex M subunit, PufM -
Rhodocyclus gelatinosus
pir||T50890 photosynthetic reaction center complex chain M [imported] -
Rubrivivax gelatinosus
dbj|BAA04101.1| (D16822) photosynthetic reaction center M subunit [Rubrivivax
gelatinosus]
dbj|BAA94043.1| (AB034704) M subunit of photosynthetic reaction center complex
[Rubrivivax gelatinosus]
Length = 325
Score = 59.3 bits (141), Expect = 7e-08
Identities = 48/193 (24%), Positives = 86/193 (43%), Gaps = 21/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+G G+L I + + ++ II F V + I + A+ P S
Sbjct: 52 IYLGPLGILSI--VFGSLAIMIIGFNMLASVGWNPIE--------FFRQFFWLALEPPSP 101
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
GL P L +GG + + L + + + R + + LGM +A A+
Sbjct: 102 KYGLKLPP----------LNDGGWWLMAGLFLTISILLWWVRMYTRARALGMGTHVAWAF 151
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
+A + + I P+ GS+S+ +P GI ++ F + N+ +PFH L +A ++
Sbjct: 152 AAAIWLYLVLGFIRPVLMGSWSEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHALSIAFLY 211
Query: 207 GGSLFSAMHGSLV 219
G +L AMHG+ +
Sbjct: 212 GATLLFAMHGATI 224
>pdb|1EYS|M Chain M, Crystal Structure Of Photosynthetic Reaction Center From A
Thermophilic Bacterium, Thermochromatium Tepidum
Length = 324
Score = 58.9 bits (140), Expect = 9e-08
Identities = 33/117 (28%), Positives = 61/117 (51%), Gaps = 1/117 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + L L + + R ++ + LGM ++ A++A + + I P+
Sbjct: 108 LSEGGWWLIAGLFLTLSILLWWVRTYKRAEALGMSQHLSWAFAAAIFFYLVLGFIRPVMM 167
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLVTS 221
GS++ +P GI ++ F + N+ +PFHML +A ++G +L AMHG+ + S
Sbjct: 168 GSWAKAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLYGSALLFAMHGATILS 224
>gb|AAG42645.1| (AF182374) photosynthetic reaction center M subunit [Bradyrhizobium
sp. ORS278]
Length = 308
Score = 58.9 bits (140), Expect = 9e-08
Identities = 51/208 (24%), Positives = 86/208 (40%), Gaps = 31/208 (14%)
Query: 84 PTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWI 143
P + GL +P L GG + + + + R + + LG+ +
Sbjct: 97 PPAPEYGLQIFPP---------LQEGGWWLMAGFFLTTSILLWWARTYRRARALGLGTHV 147
Query: 144 AVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGV 202
+ A+++ + + I PI GS+S+ +P GI ++ F H N+ +PFHML +
Sbjct: 148 SWAFASAIWLYLVLGFIRPIFMGSWSEAVPFGIFPHLDWTNNFSITHGNLFYNPFHMLSI 207
Query: 203 AGVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIVAAHGYF--GRLIF 260
A ++G +L AMHG+ V + R+G E E IV F G L +
Sbjct: 208 AFLYGSALLFAMHGATVLAI--------------SRYGGERELEQIVDRGTAFERGALFW 253
Query: 261 QYASFNNSRSLHFFLAAWPVVGIWFTAL 288
++ N+ + AW WF L
Sbjct: 254 RWTMGFNATAESIHRWAW-----WFAVL 276
>dbj|BAA22650.1| (D50653) photosynthetic reaction center M subunit [Thiocystis
gelatinosa]
Length = 257
Score = 58.9 bits (140), Expect = 9e-08
Identities = 51/223 (22%), Positives = 96/223 (42%), Gaps = 35/223 (15%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+G+ G L + + ++ II F VD I + N+ A+ P +
Sbjct: 51 IYLGFAGTLSL--IFGFFAIEIIGFNMLASVDWSPIE--------FVRNLFWLALEPPAP 100
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
GL P+ E GG + + + + R ++ + LGM ++ A+
Sbjct: 101 QYGLSIPPLSE----------GGWWLMAGFFLTASILLWWVRTYKRAEALGMSQHLSWAF 150
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
++ + + I PI GS+++ +P GI ++ F + N+ +PFHM+ +A ++
Sbjct: 151 ASAIFFYLCLGFIRPIMMGSWAEAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMVSIAFLY 210
Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIV 249
G +L AMHG+ + + R+G + E Y IV
Sbjct: 211 GSALLFAMHGATILAV--------------SRYGGDREIYQIV 239
>dbj|BAA21083.1| (D50647) photosynthetic reaction center M subunit [Allochromatium
vinosum]
Length = 257
Score = 58.6 bits (139), Expect = 1e-07
Identities = 45/193 (23%), Positives = 89/193 (45%), Gaps = 21/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+ + G L I + ++FII F VD + I+ + + + P +
Sbjct: 51 IYLAFTGTLSI--IFGFMAIFIIGFNMLASVDWNIIQ--------FVKHFFWLGLEPPAP 100
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
GL P+ E GG + + + + + R ++ + LGM ++ A+
Sbjct: 101 KYGLTIPPLSE----------GGWWLMAGFFLTMSILLWWVRTYKRAEALGMSQHLSWAF 150
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
+A + ++ I P+ GS+++ +P GI ++ F + N+ +PFHML +A ++
Sbjct: 151 AAAIFFYLSLGFIRPVMMGSWAEAVPFGIFPHLDWTAAFSIRYGNLYYNPFHMLSIAFLY 210
Query: 207 GGSLFSAMHGSLV 219
G +L AMHG+ +
Sbjct: 211 GSALLFAMHGATI 223
>gb|AAB41577.1| (U51298) photosynthetic reaction center M subunit [Rubrivivax
gelatinosus]
Length = 325
Score = 58.6 bits (139), Expect = 1e-07
Identities = 48/193 (24%), Positives = 85/193 (43%), Gaps = 21/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+G G+L I + + + II F V + I + A+ P S
Sbjct: 52 IYLGALGILSI--VFGSLATMIIGFNMLASVGWNPIE--------FFRQFFWLALEPPSP 101
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
GL P L +GG + + L + + + R + + LGM +A A+
Sbjct: 102 KYGLKLPP----------LNDGGWWLMAGLFLTISILLWWVRMYTRARALGMGTHVAWAF 151
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
+A + + I P+ GS+S+ +P GI ++ F + N+ +PFH L +A ++
Sbjct: 152 AAAIWLYLVLGFIRPVLMGSWSEAVPFGIFPHLDWTAAFSLRYGNLFYNPFHALSIAFLY 211
Query: 207 GGSLFSAMHGSLV 219
G +L AMHG+ +
Sbjct: 212 GATLLFAMHGATI 224
>gb|AAD41904.1|AF159440_2 (AF159440) photosynthetic reaction center M subunit [Rhodoplanes
elegans]
Length = 245
Score = 58.2 bits (138), Expect = 2e-07
Identities = 43/193 (22%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+GW G+ + + FIA + ++ + + + A+ P
Sbjct: 52 IYLGWLGIFSL----------LCGFIAFEIIGLNMFASVNWDPIQFVRQLPWLALEPPPP 101
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
A GL P+ + D W G + L + + R ++ + LGM +A A+
Sbjct: 102 AYGLKIPPLND----DGWWLMAGFF------LTLSILLWWVRVYQRARVLGMGTHLAWAF 151
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
++ + ++ PI GS+++ +P GI ++ F + N+ +PFHML +A ++
Sbjct: 152 ASAIFLYLSLGFFRPILMGSWAEAVPFGIFPHLDWTAAFSIRYGNLFYNPFHMLSIAFLY 211
Query: 207 GGSLFSAMHGSLV 219
G ++ AMHG+ +
Sbjct: 212 GSAVLFAMHGATI 224
>dbj|BAA26098.1| (AB013379) L subunit of photosynthetic reaction center
[Acidiphilium acidophilum]
Length = 278
Score = 57.8 bits (137), Expect = 2e-07
Identities = 54/219 (24%), Positives = 95/219 (42%), Gaps = 34/219 (15%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV+ L T++ I P +I I I P + +
Sbjct: 31 YVGFFGVVGGFFTLLGTALIIWGAAIGPTWNIWEIN-----------------IAPPNLS 73
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL F P L +GG +++I + + + RE E+S +LG+ + A+S
Sbjct: 74 YGLAFAP----------LAHGGLWQIITICAVGSFGSWALREVEISRKLGIGLHVPAAFS 123
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFG 207
+ A ++ +I P+ G++ G P GI ++ + N +P HM+ V F
Sbjct: 124 VAIFAYVSLEVIRPLLMGAWGVGFPYGIMSHLDWASNTGYNYINFEYNPMHMVAVTLFFT 183
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+ A+HGSLV ++ N + E +F + E+T+
Sbjct: 184 TTFALALHGSLVLGAV------NPAKGETAKFTEHEDTF 216
>dbj|BAA25791.1| (AB010981) photosynthetic reaction center L subunit [Erythrobacter
litoralis]
Length = 245
Score = 57.8 bits (137), Expect = 2e-07
Identities = 56/222 (25%), Positives = 93/222 (41%), Gaps = 40/222 (18%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVD---IDGIREPVSGSLLYGNNIISGAIIPT 85
Y+G+FGV + L T++ A I P ++ ID I P
Sbjct: 2 YVGFFGVTTAISALLGTALIFAAAIEGPTLNPWLID--------------------IQPP 41
Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145
GL P+ E GG +++I ++ ++ R+ E+S +LGM + V
Sbjct: 42 PIEAGLALAPLSE----------GGYWQIITACAVVAFYSWVFRQAEISRKLGMGYHVPV 91
Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAG 204
A+S V A + +I P+ G++ P GI +++ + N +P HML +
Sbjct: 92 AFSFAVFAYVTLNVIRPVWMGAWGHAFPYGIWSHLDWVSNTGYMYVNFHYNPVHMLAITF 151
Query: 205 VFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
F L A+HG LV S++ N S + + E+TY
Sbjct: 152 FFTNCLALALHGGLVLSAV------NPSNGTNVKTPEYEDTY 187
>gb|AAB67247.1| (AF018955) reaction center M subunit [Ectothiorhodospira
shaposhnikovii]
Length = 324
Score = 57.8 bits (137), Expect = 2e-07
Identities = 52/194 (26%), Positives = 86/194 (43%), Gaps = 23/194 (11%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+GW G+ I L ++ II F V+ D I+ + + + P A
Sbjct: 50 IYLGWTGLASI--LFGLMAILIIGFNFLAQVNWDVIQ--------FFRQLFWLGLEPPQA 99
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYM-GREWELSFRLGMRPWIAVA 146
GL P+ EA WL G + L L V Y R W + +A A
Sbjct: 100 QYGLGIPPLAEAGW---WLMAG--FFLTTSILLWWVRMYRRARAWNMGTH------VAWA 148
Query: 147 YSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGV 205
++A + ++ PI G +S+ +P GI ++ F ++ N+ +PFHML +A +
Sbjct: 149 FAAAIFLYLSLGFFRPILMGDWSEAVPFGIFPHLDWTTAFSLKYGNLYYNPFHMLCIAFL 208
Query: 206 FGGSLFSAMHGSLV 219
+G ++ AMHG+ V
Sbjct: 209 YGSAVLFAMHGATV 222
>gb|AAB67246.1| (AF018955) reaction center L subunit [Ectothiorhodospira
shaposhnikovii]
Length = 274
Score = 57.8 bits (137), Expect = 2e-07
Identities = 55/220 (25%), Positives = 95/220 (43%), Gaps = 36/220 (16%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGVL L T + + P +I I +I P +
Sbjct: 31 YVGFFGVLTAFFALLGTLLIVWGAAMGPTWNIWQI-----------------SINPPDLS 73
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL F P+ E GG +++I + L + R+ E++ +LGM + +A+S
Sbjct: 74 YGLGFAPLTE----------GGLWQMITICALGAFVSWALRQAEIARKLGMGLHLPIAFS 123
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206
V A + +I P+ G++ G P GI +++ +Q H +P HML +A F
Sbjct: 124 VAVFAYFTLVVIRPVLLGAWGHGFPYGIMSHLDWVSNTGYQFLH-FHYNPAHMLAIAFFF 182
Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+L ++HG L+ S+ N E + + E+T+
Sbjct: 183 TTALALSLHGGLILSA------TNPKKGEPVKTPEYEDTF 216
>sp|P11847|RCEM_RHOCA REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTHETIC REACTION CENTER M
SUBUNIT)
pir||A28771 reaction center protein chain M - Rhodobacter capsulatus
emb|CAA77555.1| (Z11165) 307 aa (34.5 kD) reaction center M protein [Rhodobacter
capsulatus]
gb|AAA26175.1| (K01184) reaction center protein M subunit [Rhodobacter capsulatus]
Length = 307
Score = 57.0 bits (135), Expect = 4e-07
Identities = 57/224 (25%), Positives = 93/224 (41%), Gaps = 28/224 (12%)
Query: 30 IGWFGVLMI-PTLLTATSVFIIAFIAAPPVDIDGIREPVSG--SLLYGNNIISGAIIPTS 86
+GW G I P L +AF AA I +G ++ ++ ++ P
Sbjct: 39 LGWMGNAQIGPIYLGIAGTVSLAFGAAWFFTIGVWYWYQAGFDPFIFMRDLFFFSLEPPP 98
Query: 87 AAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVA 146
A GL P L GG +++ L + V + R + + +LGM +A A
Sbjct: 99 AEYGLAIAP----------LKQGGVWQIASLFMAISVIAWWVRVYTRADQLGMGKHMAWA 148
Query: 147 YSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGV 205
+ + + + + PI GS+S P GI ++ F +H N+ +PFH L +A +
Sbjct: 149 FLSAIWLWSVLGFWRPILMGSWSVAPPYGIFSHLDWTNQFSLDHGNLFYNPFHGLSIAAL 208
Query: 206 FGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIV 249
+G +L AMHG+ + + RFG E E IV
Sbjct: 209 YGSALLFAMHGATILAVT--------------RFGGERELEQIV 238
>dbj|BAA77030.1| (AB026182) photosynthetic reaction center M subunit [Sphingomonas
sp. NT12]
Length = 251
Score = 56.6 bits (134), Expect = 5e-07
Identities = 43/193 (22%), Positives = 83/193 (42%), Gaps = 20/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+GW G L + + FIA + ++ + + + + ++ P +
Sbjct: 51 IYLGWLGTLSL----------LFGFIAFEIIGLNMLASVGWNPIQFVRQLFWLSLEPPAP 100
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
G A V L GG + + F V + R + + LGM ++ A+
Sbjct: 101 KYGFR-------AMVP--LAEGGWFIMTGFFFSASVLLWWARTYRRALALGMGTHVSWAF 151
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
+ + + I P+ GS+S+ +P GI ++ F + N+ +PFH L +A ++
Sbjct: 152 LSAIWLMLVLGFIRPMLMGSWSEAVPYGIFPHLDWTAAFSIRYGNLFYNPFHALSIAFLY 211
Query: 207 GGSLFSAMHGSLV 219
G +L AMHG+ +
Sbjct: 212 GSTLLFAMHGATI 224
>dbj|BAA22797.1| (D50654) photosynthetic reaction center L subunit [Phaeospirillum
molischianum]
Length = 274
Score = 56.6 bits (134), Expect = 5e-07
Identities = 52/223 (23%), Positives = 95/223 (42%), Gaps = 42/223 (18%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAP---PVDIDGIREPVSGSLLYGNNIISGAIIPT 85
Y+G+FGV + L ++ ++A P P +I +I P
Sbjct: 31 YVGFFGVTTVFFTLLGVALIVLAASHGPTWNPWEI--------------------SIAPP 70
Query: 86 SAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAV 145
+ GL F P+ E GG ++ I + + R+ E++ +LGM +
Sbjct: 71 DLSYGLGFAPLNE----------GGFWQFITICATGAFVSWALRQVEIARKLGMGLHVPF 120
Query: 146 AYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVA 203
A+S + A + +I P+ G++ G P GI +++ + +Q H +P HM+ ++
Sbjct: 121 AFSFAILAYVTLVVIRPVLMGAWGYGFPYGIFSHLDWVSNVGYQFLH-FHYNPAHMIAIS 179
Query: 204 GVFGGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
F +L AMHG L+ S+ N E + + E+T+
Sbjct: 180 FFFTNALALAMHGGLILSA------SNPGKGEVVKAAEHEDTF 216
>pir||S68239 photosynthetic reaction center chain L, terbutryn-resistant -
Rubrivivax gelatinosus
gb|AAA73927.1| (U30310) reaction center L subunit [Rubrivivax gelatinosus]
gb|AAB41576.1| (U51298) photosynthetic reaction center L subunit [Rubrivivax
gelatinosus]
prf||2123297A pufL gene [Rubrivivax gelatinosus]
Length = 279
Score = 56.6 bits (134), Expect = 5e-07
Identities = 52/220 (23%), Positives = 93/220 (41%), Gaps = 36/220 (16%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV + + T++ I P ++ I +I P
Sbjct: 31 YVGFFGVTTLFFSVLGTALIIWGASQGPTWNLWQI-----------------SIAPPDLK 73
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P+ E GG +++I + + + RE E+ +LGM+ + +A+S
Sbjct: 74 YGLGVAPLME----------GGLWQIITVCAIGAFVSWALREVEICRKLGMQYHVPIAFS 123
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206
+ A + +I PI G++ G P GI +++ + +Q H +P HML + F
Sbjct: 124 FAILAYVTLVVIRPILMGAWGHGFPYGIFSHLDWVSNVGYQYLH-FHYNPAHMLAITFFF 182
Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+L +MHG L+ S+ N E + E+T+
Sbjct: 183 TTTLAMSMHGGLILSA------ANPKKGEPMKTTDHEDTF 216
>sp|P51760|RCEL_RHOGE REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L
SUBUNIT)
pir||E49964 photosynthetic reaction center complex L subunit, PufL -
Rhodocyclus gelatinosus
pir||T50889 photosynthetic reaction center complex chain L [imported] -
Rubrivivax gelatinosus
dbj|BAA04100.1| (D16822) photosynthetic reaction center L subunit [Rubrivivax
gelatinosus]
dbj|BAA94042.1| (AB034704) L subunit of photosynthetic reaction center complex
[Rubrivivax gelatinosus]
Length = 279
Score = 56.6 bits (134), Expect = 5e-07
Identities = 52/220 (23%), Positives = 93/220 (41%), Gaps = 36/220 (16%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV + + T++ I P ++ I +I P
Sbjct: 31 YVGFFGVTTLFFSVLGTALIIWGASQGPTWNLWQI-----------------SIAPPDLK 73
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P+ E GG +++I + + + RE E+ +LGM+ + +A+S
Sbjct: 74 YGLGVAPLME----------GGLWQIITVCAIGAFVSWALREVEICRKLGMQYHVPIAFS 123
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206
+ A + +I PI G++ G P GI +++ + +Q H +P HML + F
Sbjct: 124 FAILAYVTLVVIRPILMGAWGHGFPYGIFSHLDWVSNVGYQYLH-FHYNPAHMLAITFFF 182
Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+L +MHG L+ S+ N E + E+T+
Sbjct: 183 TTTLAMSMHGGLILSA------ANPKKGEPMKTTDHEDTF 216
>pdb|1EYS|L Chain L, Crystal Structure Of Photosynthetic Reaction Center From A
Thermophilic Bacterium, Thermochromatium Tepidum
Length = 280
Score = 55.8 bits (132), Expect = 8e-07
Identities = 55/220 (25%), Positives = 93/220 (42%), Gaps = 28/220 (12%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV + T V +I + A G P S Y N+ +I P +
Sbjct: 30 YVGFFGV--VGFCFTLLGVLLIVWGATI-----GPTGPTSDLQTY--NLWRISIAPPDLS 80
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P+ E GG +++I + + RE E+ +LG+ + A+S
Sbjct: 81 YGLRMAPLTE----------GGLWQIITICAAGAFISWALREVEICRKLGIGFHVPFAFS 130
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206
+ A + + P+ G++ G P GI +++ + +Q H +P HML ++ F
Sbjct: 131 FAIGAYLVLVFVRPLLMGAWGHGFPYGILSHLDWVSNVGYQFLH-FHYNPAHMLAISFFF 189
Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
L +MHGSL+ S N E + + E T+
Sbjct: 190 TNCLALSMHGSLILS------VTNPQRGEPVKTSEHENTF 223
>dbj|BAA33002.1| (AB015977) photosynthetic reaction center M subunit
[Rhodopseudomonas palustris]
Length = 243
Score = 55.8 bits (132), Expect = 8e-07
Identities = 49/193 (25%), Positives = 84/193 (43%), Gaps = 21/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+G GV + + A ++ II VD + I + N A+ P A
Sbjct: 50 IYLGVTGV--VSAIFFAFAMLIIGLNMLAQVDWNVIA--------FIKNFCWLALEPPKA 99
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
GL F P+ E WL G + + R + S LGM ++ A+
Sbjct: 100 EYGLSFPPLAEGGW---WLTTG-------FFLTASILLWWVRTYRRSRALGMGTHVSWAF 149
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEHNILMH-PFHMLGVAGVF 206
++ + A+ I P+ G++S+ P GI ++ F ++ L + PFH L +A ++
Sbjct: 150 ASAIFLYLALGFIQPVMMGTWSEAPPFGIFPHLDWTNNFSIKYGSLYYNPFHCLSIAFLY 209
Query: 207 GGSLFSAMHGSLV 219
G +L AMHG+ +
Sbjct: 210 GSALLFAMHGATI 222
>dbj|BAA32993.1| (AB015707) photosynthetic reaction center L subunit [Erythrobacter
sp.]
Length = 245
Score = 55.8 bits (132), Expect = 8e-07
Identities = 52/193 (26%), Positives = 84/193 (42%), Gaps = 38/193 (19%)
Query: 80 GAIIPTSAAIG--LHFYPIWEAASVDEWLYN-----------------GGPYELIVLHFL 120
G SAA+G L F E +++ WL + GG ++ I + L
Sbjct: 2 GVTTAISAALGTMLIFAAALEGPTMNPWLIDIQPPAIEEGLSIMPLKEGGYWQWITVCAL 61
Query: 121 LGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVF------LIYPIGQGSFSDGMPL 174
+ + ++ R+ E+S +LGM Y P+A ATAVF +I P+ G++ P
Sbjct: 62 IAFSSWVMRQAEISRKLGM------TYHVPIAFATAVFAYFTLQVIRPVWMGAWGHAFPY 115
Query: 175 GISGTFNFM-IVFQAEHNILMHPFHMLGVAGVFGGSLFSAMHGSLVTSSLIRETTENESA 233
GI +++ N +P HML + F L A+HG LV S++ N S
Sbjct: 116 GIWTHLDWVSYTGYLYGNFHFNPIHMLAITFFFTNCLALALHGGLVLSAV------NPSG 169
Query: 234 NEGYRFGQEEETY 246
+ + + E+TY
Sbjct: 170 DTEVKTPEYEDTY 182
>dbj|BAA22649.1| (D50653) photosynthetic reaction center L subunit [Thiocystis
gelatinosa]
Length = 257
Score = 55.4 bits (131), Expect = 1e-06
Identities = 54/220 (24%), Positives = 89/220 (39%), Gaps = 31/220 (14%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G FGV L T + + P ++ NI +I P +
Sbjct: 10 YVGLFGVSEFFFALLGTLLIVWGATLGPNAELQTF------------NIWQISIAPPDLS 57
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P+ E GG +++I + + R+ E+S +LG+ + A+S
Sbjct: 58 YGLGMAPMTE----------GGLWQIITFCAIGAFVSWALRQVEISRKLGIGFHVPFAFS 107
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206
+ A + +I PI G++ G P GI +++ + +Q H +P HML + F
Sbjct: 108 FAIGAYITLVVIRPILLGAWGHGFPYGIMSHLDWVSNVGYQFLH-FHYNPAHMLAITFFF 166
Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
+L AMHGSL S N E + + E T+
Sbjct: 167 TNALALAMHGSLNLS------VTNPQEGEPVKTSEHENTF 200
>dbj|BAA22645.1| (D50651) photosynthetic reaction center L subunit [Rhodocyclus
tenuis]
Length = 253
Score = 55.4 bits (131), Expect = 1e-06
Identities = 47/195 (24%), Positives = 86/195 (44%), Gaps = 28/195 (14%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FG+ + L T + ++ P ++ I +I P
Sbjct: 10 YVGFFGITAVMCALMGTLLIVLGASWGPTWNLWQI-----------------SIAPPDLK 52
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P+ E GG ++ I + + + RE E+ +LG+ +I A+S
Sbjct: 53 YGLGVAPLRE----------GGLWQAITVCAIGVFVSWALREVEICRKLGIGFYIPFAFS 102
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFG 207
+ A + +I P+ G++ G P GI +++ ++ + +P HMLG+A F
Sbjct: 103 FAILAYITLVVIRPVLMGAWGHGFPYGIMSHLDWVSNTGYQYLHFHYNPGHMLGIAFFFT 162
Query: 208 GSLFSAMHGSLVTSS 222
+L A+HGSL+ S+
Sbjct: 163 TTLALALHGSLILSA 177
>dbj|BAA76948.1| (AB020784) pufM [Rhodovulum sulfidophilum]
Length = 321
Score = 55.0 bits (130), Expect = 1e-06
Identities = 39/140 (27%), Positives = 63/140 (44%), Gaps = 11/140 (7%)
Query: 81 AIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMR 140
A+ P S GL P+ E GG Y + L+ V + R + L+ M
Sbjct: 94 ALEPPSPEYGLRIPPLKE----------GGWYMVASFFLLISVWAWWARTYMLAVEHKMG 143
Query: 141 PWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHM 199
IA A+ + + + PI GS+S+ +P GI ++ F + N+ +PFH
Sbjct: 144 KHIAWAFLSAIWLFMVLGFFRPILMGSWSEMVPYGIFPHLDWTTAFSIRYGNLYYNPFHA 203
Query: 200 LGVAGVFGGSLFSAMHGSLV 219
L +A ++G +L AMHG +
Sbjct: 204 LSIAFLYGSALLFAMHGGTI 223
>gb|AAD41903.1|AF159440_1 (AF159440) photosynthetic reaction center L subunit [Rhodoplanes
elegans]
Length = 235
Score = 54.7 bits (129), Expect = 2e-06
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 76 NIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSF 135
NI I P + GL P+ E GG +++I + L + R+ E++
Sbjct: 22 NIWQINIAPPDLSYGLTLAPLKE----------GGLWQIITVCALGAFCSWALRQAEIAR 71
Query: 136 RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNIL 193
+LGM I VA+ + A A+ +I P+ G++ G P GI +++ + +Q H
Sbjct: 72 KLGMGLHIPVAFGFAIFAYVALVVIRPLLMGAWGHGFPYGIMSHLDWVSNVGYQNLH-FH 130
Query: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSS 222
+P H + + F +L AMHGSL+ S+
Sbjct: 131 YNPAHCIAITFFFTNALALAMHGSLIVSA 159
>pdb|1DS8|M Chain M, Photosynthetic Reaction Center From Rhodobacter
Sphaeroides In The Charge-Neutral Dqaqb State With The
Proton Transfer Inhibitor Cd2+
pdb|1DS8|S Chain S, Photosynthetic Reaction Center From Rhodobacter
Sphaeroides In The Charge-Neutral Dqaqb State With The
Proton Transfer Inhibitor Cd2+
pdb|1DV6|M Chain M, Photosynthetic Reaction Center From Rhodobacter
Sphaeroides In The Charge-Neutral Dqaqb State With The
Proton Transfer Inhibitor Zn2+
pdb|1DV6|S Chain S, Photosynthetic Reaction Center From Rhodobacter
Sphaeroides In The Charge-Neutral Dqaqb State With The
Proton Transfer Inhibitor Zn2+
pdb|1DV3|M Chain M, Photosynthetic Reaction Center From Rhodobacter
Sphaeroides In The Charge-Separated D+qaqb- State With
The Proton Transfer Inhibitor Cd2+
pdb|1DV3|S Chain S, Photosynthetic Reaction Center From Rhodobacter
Sphaeroides In The Charge-Separated D+qaqb- State With
The Proton Transfer Inhibitor Cd2+
Length = 307
Score = 54.3 bits (128), Expect = 2e-06
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + LGM A A+ + + + I PI
Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 223
>pdb|1QOV|M Chain M, Photosynthetic Reaction Center Mutant With Ala M260
Replaced With Trp (Chain M, A260w)
Length = 307
Score = 54.3 bits (128), Expect = 2e-06
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + LGM A A+ + + + I PI
Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 223
>pir||T50761 reaction center protein chain M [imported] - Rhodobacter
sphaeroides
gb|AAF24305.1| (AF195122) PufM [Rhodobacter sphaeroides]
Length = 308
Score = 54.3 bits (128), Expect = 2e-06
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + LGM A A+ + + + I PI
Sbjct: 110 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 169
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 170 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 224
>pdb|1AIJ|S Chain S, Photosynthetic Reaction Center From Rhodobacter
Sphaeroides In The Charge-Neutral Dqaqb State
Length = 301
Score = 54.3 bits (128), Expect = 2e-06
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + LGM A A+ + + + I PI
Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 223
>dbj|BAA09314.1| (D50647) photosynthetic reaction center L subunit [Allochromatium
vinosum]
Length = 257
Score = 54.3 bits (128), Expect = 2e-06
Identities = 52/219 (23%), Positives = 87/219 (38%), Gaps = 29/219 (13%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV L + + P ++ NI +I P +
Sbjct: 10 YVGFFGVAGFFFALLVVLLIVWGATIGPNAELQTY------------NIWQISIAPPDLS 57
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P+ E GG +++I + + + RE E+ +LG+ I A++
Sbjct: 58 YGLGMAPMTE----------GGLWQIITICAIGAFVSWALREVEICRKLGIGFHIPFAFA 107
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMI-VFQAEHNILMHPFHMLGVAGVFG 207
P+ A + ++ PI G++ G P GI +++ V N +P HML + F
Sbjct: 108 FPIGAYLVLVVVRPILMGAWGHGFPYGILSHLDWVSNVGYQFLNFHYNPAHMLAITFFFT 167
Query: 208 GSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
L +MHGSL S N E + + E T+
Sbjct: 168 NCLALSMHGSLNLS------VTNPQKGEEVKTSEHENTF 200
>pdb|1PSS|M Chain M, Photosynthetic Reaction Center (Wild-Type)
Length = 296
Score = 54.3 bits (128), Expect = 2e-06
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + LGM A A+ + + + I PI
Sbjct: 104 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 163
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 164 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 218
>pdb|2RCR|M Chain M, Photosynthetic Reaction Center From (Rhodobacter
sphaeroides)
pdb|1PCR|M Chain M, Photosynthetic Reaction Center
pdb|1AIJ|M Chain M, Photosynthetic Reaction Center From Rhodobacter
Sphaeroides In The Charge-Neutral Dqaqb State
pdb|1AIG|M Chain M, Photosynthetic Reaction Center From Rhodobacter
Sphaeroides In The D+qb- Charge Separated State
pdb|1AIG|O Chain O, Photosynthetic Reaction Center From Rhodobacter
Sphaeroides In The D+qb- Charge Separated State
pdb|4RCR|M Chain M, Photosynthetic Reaction Center
Length = 307
Score = 54.3 bits (128), Expect = 2e-06
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + LGM A A+ + + + I PI
Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 223
>prf||1703253B photosyn reaction center M [Chloroflexus aurantiacus]
Length = 307
Score = 54.3 bits (128), Expect = 2e-06
Identities = 35/140 (25%), Positives = 64/140 (45%), Gaps = 13/140 (9%)
Query: 82 IIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFL-LGVACYMGREWELSFRLGMR 140
I P S+ GL F P+ N G + LI FL + + + + + LG++
Sbjct: 85 IDPPSSRYGLSFPPL-----------NEGGWWLIATFFLTVSIFAWYMHIYTRAKALGIK 133
Query: 141 PWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHM 199
P++A ++ +A +++I P+ G +S+ GI ++ + N +PFHM
Sbjct: 134 PYLAYGFTGAIALYLVIYIIRPVWMGDWSEAPAHGIKALLDWTNNVSVRYGNFYYNPFHM 193
Query: 200 LGVAGVFGGSLFSAMHGSLV 219
L + + G + F AMH +
Sbjct: 194 LSIFFLLGSTFFFAMHAGTI 213
>sp|P02953|RCEM_RHOSH REACTION CENTER PROTEIN M CHAIN (PHOTOSYNTHETIC REACTION CENTER M
SUBUNIT)
pir||WNRFMS reaction center protein chain M - Rhodobacter sphaeroides
gb|AAA26179.1| (K00827) reaction center subunit m [Rhodobacter sphaeroides]
emb|CAB38755.1| (AJ010302) reaction centre M protein [Rhodobacter sphaeroides]
prf||0911309A protein M,reaction center [Rhodobacter sphaeroides]
Length = 308
Score = 54.3 bits (128), Expect = 2e-06
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + LGM A A+ + + + I PI
Sbjct: 110 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 169
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 170 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 224
>pdb|1E6D|M Chain M, Photosynthetic Reaction Center Mutant With Trp M115
Replaced With Phe (Chain M, Wm115f) Phe M197 Replaced
With Arg (Chain M, Fm197r)
Length = 307
Score = 53.9 bits (127), Expect = 3e-06
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + LGM A A+ + + + I PI
Sbjct: 109 LKEGGLFLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLRYNPFHGLSIAFLYGSALLFAMHGATI 223
>pdb|1MPS|M Chain M, Photosynthetic Reaction Center Mutant With Phe M 197
Replaced With Arg And Tyr M 177 Replaced With Phe (Chain
M, Y177f, F197r)
Length = 307
Score = 53.9 bits (127), Expect = 3e-06
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + LGM A A+ + + + I PI
Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 169 GSWSEAVPFGIFSHLDWTNNFSLVHGNLRYNPFHGLSIAFLYGSALLFAMHGATI 223
>sp|P51762|RCEL_CHRVI REACTION CENTER PROTEIN L CHAIN (PHOTOSYNTHETIC REACTION CENTER L
SUBUNIT)
dbj|BAA32740.1| (AB011811) L subunit of reaction center complex [Allochromatium
vinosum]
Length = 278
Score = 53.9 bits (127), Expect = 3e-06
Identities = 51/220 (23%), Positives = 89/220 (40%), Gaps = 31/220 (14%)
Query: 29 YIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAA 88
Y+G+FGV L + + P ++ NI +I P +
Sbjct: 31 YVGFFGVAGFFFALLGVLLIVWGATIGPNAELQTY------------NIWQISIAPPDLS 78
Query: 89 IGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYS 148
GL P+ E GG +++I + + + RE E+ +LG+ I A++
Sbjct: 79 YGLGMAPMTE----------GGLWQIITICAIGAFVSWALREVEICRKLGIGFHIPFAFA 128
Query: 149 APVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFM--IVFQAEHNILMHPFHMLGVAGVF 206
+ A + ++ PI G++ G P GI +++ + +Q H +P HML + F
Sbjct: 129 FAIGAYLVLVVVRPILMGAWGHGFPYGILSHLDWVSNVGYQFLH-FHYNPAHMLAITFFF 187
Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETY 246
L +MHGSL+ S N E + + E T+
Sbjct: 188 TNCLALSMHGSLILS------VTNPQKGEEVKTSEHENTF 221
>dbj|BAA26099.1| (AB013379) M subunit of photosynthetic reaction center
[Acidiphilium acidophilum]
Length = 256
Score = 53.9 bits (127), Expect = 3e-06
Identities = 55/223 (24%), Positives = 94/223 (41%), Gaps = 35/223 (15%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+G GV I L+ A + + A+ V+ + IR + ++ A+ P +
Sbjct: 51 IYLGTLGVASIICLVVAFEIIGLNMWAS--VNWNPIR--------FVRDLPWLALEPPAP 100
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
A GL P L +GG + L L + + R + S +LG+ A A+
Sbjct: 101 AYGLSLPP----------LQHGGWWLLAGLFLTSSLILWWARIYRRSRQLGIGTHTAWAF 150
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
++ + + I P+ GS+ + P GI ++ + F + N+ PFHML + ++
Sbjct: 151 ASGIWLFLVLGFIRPLLMGSWGEAPPFGIFPHLDWTVSFSLRYGNLYYDPFHMLSIVFLY 210
Query: 207 GGSLFSAMHGSLVTSSLIRETTENESANEGYRFGQEEETYNIV 249
G L AMHG+ + + RFG E E IV
Sbjct: 211 GSVLLFAMHGATILAV--------------SRFGGEREAEQIV 239
>dbj|BAA22648.1| (D50652) photosynthetic reaction center M subunit [Rhodomicrobium
vannielii]
Length = 257
Score = 53.9 bits (127), Expect = 3e-06
Identities = 41/179 (22%), Positives = 78/179 (42%), Gaps = 11/179 (6%)
Query: 42 LTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAS 101
LT + I FIA + ++ + + A+ P + GL P+ +
Sbjct: 55 LTGVASIIFGFIAIEIIGLNMAASVDWSPAQFVKQLPWLALEPPAPENGLKIPPLNQGGW 114
Query: 102 VDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIY 161
WL+ G V + R + + +LGM IA A+++ + ++ L
Sbjct: 115 ---WLWAG-------FFMTASVLLWWARTYLRARKLGMGTHIAWAFASAIFLMLSLGLFR 164
Query: 162 PIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
P+ G++ + +P GI ++ F + N+ +PFHML +A ++G +L MHG+ +
Sbjct: 165 PVLMGTWGEAVPFGIFPHLDWTTAFSIRYGNLYYNPFHMLSIAFLYGSALLFGMHGATI 223
>dbj|BAA22643.1| (D50650) photosynthetic reaction center L subunit [Rhodoferax
fermentans]
Length = 253
Score = 53.9 bits (127), Expect = 3e-06
Identities = 38/149 (25%), Positives = 71/149 (47%), Gaps = 13/149 (8%)
Query: 76 NIISGAIIPTSAAIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSF 135
N+ +I P + GL P+ E GG ++L+ + + +M RE E+
Sbjct: 40 NLWQISIAPPDLSYGLGIAPLME----------GGLWQLVTVCAIGAFVSWMLREVEICR 89
Query: 136 RLGMRPWIAVAYSAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNF--MIVFQAEHNIL 193
+LGM + +A+ + A + +I P+ G++ G P GI ++ + +Q H
Sbjct: 90 KLGMGLHVPLAFGVAIFAYVTLVVIRPVLMGAWGHGFPYGIYSHLDWGSNVGYQYLH-FH 148
Query: 194 MHPFHMLGVAGVFGGSLFSAMHGSLVTSS 222
+P HML ++ FG + ++H SL+ S+
Sbjct: 149 YNPAHMLAISFSFGTTFALSLHSSLIVSA 177
>emb|CAA30070.1| (X07018) psbD gene product (123 AA) [Synechocystis PCC6803]
Length = 123
Score = 53.9 bits (127), Expect = 3e-06
Identities = 27/62 (43%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 241 QEEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVVGIWFTALGISTMAFNLNGF 300
Q EETY++V A+ ++ + IF A F+N R LHFF+ PV G+W +++GI +A NL +
Sbjct: 10 QAEETYSMVTANRFWSQ-IFGIA-FSNKRWLHFFMLFVPVTGLWMSSVGIVGLALNLRAY 67
Query: 301 NF 302
+F
Sbjct: 68 DF 69
>pdb|1E14|M Chain M, Photosynthetic Reaction Center Mutant With Phe M197
Replaced With Arg (Chain M, Fm197r) And Gly M203
Replaced With Asp (Chain M, Gm203d)
Length = 307
Score = 53.5 bits (126), Expect = 4e-06
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + LGM A A+ + + + I PI
Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLSAIWLWMVLGFIRPILM 168
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLRYNPFHDLSIAFLYGSALLFAMHGATI 223
>dbj|BAA25790.1| (AB010830) photosynthetic reaction center M subunit [Rhodomicrobium
vannielii]
Length = 250
Score = 53.5 bits (126), Expect = 4e-06
Identities = 41/179 (22%), Positives = 78/179 (42%), Gaps = 11/179 (6%)
Query: 42 LTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSAAIGLHFYPIWEAAS 101
LT + I FIA + ++ + + A+ P + GL P+ +
Sbjct: 55 LTGVASIIFGFIAIEIIGLNMAASVDWSPAQFVKQLPWLALEPPAPENGLKIPPLNQGGW 114
Query: 102 VDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIY 161
WL+ G V + R + + +LGM IA A+++ + ++ L
Sbjct: 115 ---WLWAG-------FFMTASVLLWWARTYLRARQLGMGTHIAWAFASAIFLMLSLGLFR 164
Query: 162 PIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
P+ G++ + +P GI ++ F + N+ +PFHML +A ++G +L MHG+ +
Sbjct: 165 PVLMGTWGEAVPFGIFPHLDWTTAFSIRYGNLYYNPFHMLSIAFLYGSALLFGMHGATI 223
>dbj|BAA25552.1| (AB005218) M subunit of photosynthetic reaction center complex
[Acidiphilium rubrum]
dbj|BAA25559.1| (AB005219) M subunit of photosynthetic reaction center complex
[Acidiphilium angustum]
Length = 326
Score = 53.5 bits (126), Expect = 4e-06
Identities = 44/193 (22%), Positives = 86/193 (43%), Gaps = 21/193 (10%)
Query: 28 LYIGWFGVLMIPTLLTATSVFIIAFIAAPPVDIDGIREPVSGSLLYGNNIISGAIIPTSA 87
+Y+G G+ I T + A + + +A+ V+ + IR + ++ A+ P +
Sbjct: 51 IYLGTLGIASIATFVIAFEIIGLNMLAS--VNWNPIR--------FVRDLPWLALEPPAP 100
Query: 88 AIGLHFYPIWEAASVDEWLYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAY 147
+ GL P L +GG + + + + R + S +LG+ A A+
Sbjct: 101 SYGLRLPP----------LQHGGWWLMAGFFLTTSLILWWARIYRRSRQLGIGTHTAWAF 150
Query: 148 SAPVAAATAVFLIYPIGQGSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVF 206
++ + + I P+ GS+ + P GI ++ + F + N+ PFHML + ++
Sbjct: 151 ASAIWLYLVLGFIRPLLMGSWGEAPPFGIFPHLDWTVSFSLRYGNLYYDPFHMLSIVFLY 210
Query: 207 GGSLFSAMHGSLV 219
G L AMHG+ +
Sbjct: 211 GSVLLFAMHGATI 223
>pdb|1YST|M Chain M, Photosynthetic Reaction Center (Wild Type)
Length = 305
Score = 53.5 bits (126), Expect = 4e-06
Identities = 33/115 (28%), Positives = 57/115 (48%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + +GM A A+ + + + I PI
Sbjct: 109 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQAMGMGKHTAWAFLSAIWLWMVLGFIRPILM 168
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 169 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 223
>pir||S24213 reaction center protein chain M - Rhodobacter sphaeroides
emb|CAA45001.1| (X63405) polypeptide M of reaction centre [Rhodobacter sphaeroides]
Length = 308
Score = 53.5 bits (126), Expect = 4e-06
Identities = 33/115 (28%), Positives = 57/115 (48%), Gaps = 1/115 (0%)
Query: 106 LYNGGPYELIVLHFLLGVACYMGREWELSFRLGMRPWIAVAYSAPVAAATAVFLIYPIGQ 165
L GG + + + V + GR + + +GM A A+ + + + I PI
Sbjct: 110 LKEGGLWLIASFFMFVAVWSWWGRTYLRAQAMGMGKHTAWAFLSAIWLWMVLGFIRPILM 169
Query: 166 GSFSDGMPLGISGTFNFMIVFQAEH-NILMHPFHMLGVAGVFGGSLFSAMHGSLV 219
GS+S+ +P GI ++ F H N+ +PFH L +A ++G +L AMHG+ +
Sbjct: 170 GSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFHGLSIAFLYGSALLFAMHGATI 224
Database: nr
Posted date: Mar 14, 2001 1:25 PM
Number of letters in database: 201,912,487
Number of sequences in database: 640,428
Lambda K H
0.324 0.140 0.439
Gapped
Lambda K H
0.270 0.0470 0.230
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 144866406
Number of Sequences: 640428
Number of extensions: 6251454
Number of successful extensions: 17910
Number of sequences better than 10.0: 334
Number of HSP's better than 10.0 without gapping: 277
Number of HSP's successfully gapped in prelim test: 57
Number of HSP's that attempted gapping in prelim test: 17378
Number of HSP's gapped (non-prelim): 340
length of query: 353
length of database: 201,912,487
effective HSP length: 50
effective length of query: 303
effective length of database: 169,891,087
effective search space: 51476999361
effective search space used: 51476999361
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.8 bits)
X3: 64 (24.9 bits)
S1: 40 (21.6 bits)
S2: 72 (32.5 bits)
Lotus japonicus(Cp)