GENSCAN 1.0	Date run:  2-Nov-116	Time: 17:59:25

Sequence gi568815593f:65463311_65687393 : 224083 bp : 37.43% C+G : Isochore 1 ( 0 - 43 C+G%)

Parameter matrix: HumanIso.smat

Predicted genes/exons:

Gn.Ex Type S .Begin ...End .Len Fr Ph I/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------

 1.08 PlyA -   2483   2478    6                               1.05
 1.07 Term -  25309  24422  888  1  0   23   39   438 0.143  23.87
 1.06 Intr -  26270  26182   89  0  2   59  108    47 0.373   2.57
 1.05 Intr -  26825  26670  156  0  0   32   70   108 0.210   2.46
 1.04 Intr -  27812  27658  155  1  2   81   55   100 0.310   4.79
 1.03 Intr -  28553  28462   92  2  2   76   80    50 0.396   0.87
 1.02 Intr -  52834  52767   68  2  2  112   72    65 0.032   5.01
 1.01 Init -  76490  76388  103  2  1   84   74    51 0.137   3.76
 1.00 Prom -  80448  80409   40                              -5.85

 2.03 PlyA -  82721  82716    6                              -0.45
 2.02 Term -  86622  86101  522  0  0   67   39   238 0.950  10.09
 2.01 Init -  91597  91487  111  1  0   26  100   161 0.996  11.36
 2.00 Prom -  97312  97273   40                              -7.35

 3.00 Prom +  97807  97846   40                              -8.05
 3.01 Init + 100001 100196  196  1  1  100   65   306 0.992  28.64
 3.02 Intr + 104203 104294   92  2  2   86   56    57 0.607   1.09
 3.03 Intr + 106540 106688  149  0  2   63   92   102 0.635   6.21
 3.04 Intr + 108529 108976  448  1  1   56   94   316 0.977  21.42
 3.05 Intr + 113569 113759  191  0  2   54  119   190 0.975  16.16
 3.06 Intr + 116114 116303  190  2  1   62   80   140 0.644   9.27
 3.07 Intr + 119728 119909  182  0  2   27   27   265 0.261  12.04
 3.08 Intr + 121704 121785   82  0  1   68  115   -17 0.205  -2.28
 3.09 Intr + 122689 122871  183  0  0   39  127   109 0.200   8.96
 3.10 Term + 123943 124086  144  0  0   55   38   146 0.978   3.23
 3.11 PlyA + 124114 124119    6                               1.05

 4.11 PlyA - 124217 124212    6                               1.05
 4.10 Term - 128638 128459  180  1  0   70   34   201 0.999   9.53
 4.09 Intr - 131335 131211  125  2  2   62   95    54 0.677   2.88
 4.08 Intr - 133870 133741  130  1  1   17  111   131 0.621   7.65
 4.07 Intr - 141735 141601  135  0  0   61   90   152 0.961  12.54
 4.06 Intr - 146148 145933  216  0  0   88   96   198 0.967  18.38
 4.05 Intr - 147733 147551  183  1  0   30   22   215 0.996   8.16
 4.04 Intr - 148571 148293  279  2  0   60   86   126 0.913   6.35
 4.03 Intr - 150909 150788  122  1  2   72   57   121 0.993   6.69
 4.02 Intr - 154945 154783  163  1  1   35   63   154 0.966   6.23
 4.01 Init - 158724 158722    3  0  0  108   81     0 0.552   1.35
 4.00 Prom - 159193 159154   40                              -8.15

 5.02 PlyA - 159342 159337    6                              -0.45
 5.01 Sngl - 160964 160632  333  2  0   88   43   240 0.904  15.49
 5.00 Prom - 163117 163078   40                              -7.15

 6.00 Prom + 164403 164442   40                              -6.65
 6.01 Init + 166278 166629  352  2  1   61   32   168 0.543   5.87
 6.02 Intr + 171991 172059   69  2  0   89   60    52 0.508   0.74
 6.03 Intr + 172634 172733  100  0  1   63   86   101 0.986   5.65
 6.04 Intr + 174386 174470   85  2  1   98  106    33 0.997   5.00
 6.05 Intr + 183745 183872  128  0  2   69   75   131 0.856   8.46
 6.06 Intr + 197389 197587  199  1  1   74  101    95 0.813   7.83
 6.07 Term + 198740 198844  105  1  0   79   38    85 0.539   0.03
 6.08 PlyA + 200202 200207    6                               1.05

 7.06 PlyA - 200820 200815    6                               1.05
 7.05 Term - 207047 206936  112  1  1   87   34   166 0.960   8.15
 7.04 Intr - 208688 208605   84  1  0   79   94    59 0.481   3.62
 7.03 Intr - 208971 208934   38  0  2   71   87    27 0.477  -2.96
 7.02 Intr - 217484 217346  139  1  1  107   95   122 0.943  14.35
 7.01 Intr - 222162 222058  105  2  0  113   98    92 0.998  11.11

Suboptimal exons with probability > 0.800

Exnum Type S .Begin ...End .Len Fr Ph B/Ac Do/T CodRg P.... Tscr..
----- ---- - ------ ------ ---- -- -- ---- ---- ----- ----- ------



Predicted peptide sequence(s):

Predicted coding sequence(s):


>gi568815593f:65463311_65687393|GENSCAN_predicted_peptide_1|516_aa
MAGSTWVLKEGASWQSLELMTSVQESHGAQAQRYYLYVEALTPSAIVFGDRILEDIKNQC
LAIAHSRFKFLASSRQFPLQLPKARDFRRPLAFYQSNCTGERGMIRLFRDLLDTGSELTF
IPGDPKHHCGPPVKVGAYGVKFLVVQWCGASQDIPSKVKDKLLHLPPPTTKKEGQRLVGL
FGFWRQYIPHSAIKWGMHSGIPSSNRSGIYVIRLEQVLRAQICVCLSCMECLIHHHGILH
SIASDQGTYFTAKEVQQYVHALGIHWSSPYHFEAAGLIERWNGLLKSQLQHQLGDNTLQG
WRRVLQKAVYALNQCPIYGTVSPIARIHGSRNQGVEVEVAPLTITPSGPLEKFLLPVPAT
LRSAGLKVLGPEWRVLPPGHTTMIPLNWKLILPPGHFELLLPLSQQAKKGVTVLPGVIGL
DYQDEISLLLILKSVYSSLPDGGKEEYAWNTGDPLGPLLVLPCPVIKVNGKLQQPNPSRT
KNDPYPSGMKVWVTLPGTKPQPAEVLAEETQGIQNG

>gi568815593f:65463311_65687393|GENSCAN_predicted_CDS_1|1551_bp
atggctggttccacctgggttttaaaggaaggagcctcctggcagagccttgagcttatg
acctcagtccaggagagccatggtgcccaggcacagcgatactatttatatgttgaagcc
ctaacccccagtgcgatagtgtttggagacaggatcttggaagatattaagaatcagtgt
cttgctattgcccactctcgtttcaaattcctggcctcaagccggcaattcccacttcag
cttcccaaagcaagagatttcaggagacctctggccttttaccagagtaactgcactggg
gaaaggggaatgatcagacttttcagggacttactggatactggctctgagctgacattt
attccaggggacccaaaacatcattgtggtcctccagttaaagtaggggcttatggagta
aaatttctagtggtccagtggtgtggggcctctcaagatattccttctaaggtgaaggat
aagttgctgcatttgccccctcctacaaccaagaaagagggacaacgcctagtgggtcta
tttggattttggaggcaatacattcctcattctgccataaagtggggcatgcacagcggc
attccatcatcaaatcgaagtggtatatatgtgatcaggcttgagcaagtcctgagggca
caaatatgcgtttgcctatcctgcatggaatgccttatccaccatcatggtattctgcat
agcattgcctctgaccaaggcacatactttacagctaaagaagtgcagcagtatgttcat
gctcttggaattcactggtcttctccttatcattttgaagcagctggattgatagaacgg
tggaatggccttttgaagtcacaattacaacatcaactaggtgacaatactttgcagggc
tggcgcagagttctccagaaggctgtgtatgctctgaatcagtgtccaatatatggtaca
gtttctcccatagccaggattcacgggtccaggaatcaaggggtggaagtggaagtggca
ccactcaccatcacccctagtggcccattagaaaaatttttgcttcctgttcccgcaaca
ttacgttctgctggcctaaaagtcttaggtccagagtggagagtgctgccaccaggacac
acaacaatgattccattaaactggaagttaatattaccacctggacactttgagctcctc
ctacctttaagtcagcaggctaagaagggagttacagtgttgcctggggtgattggcttg
gactatcaagatgaaatcagtctactactcatcttgaaatcagtctactcttccttacct
gatggaggtaaggaagagtatgcatggaatacaggagatcctttagggcctctcttagta
ttaccatgcccagtgattaaggtcaatgggaaactacaacaacccaatccaagcaggact
aaaaatgacccatacccctccggaatgaaggtttgggtcactctaccaggtacaaaacca
caacctgctgaggtgcttgctgaagagacacagggaatacagaatgggtag

>gi568815593f:65463311_65687393|GENSCAN_predicted_peptide_2|210_aa
MNQEDLDPDSTTDVGDVTNTEEELIRECEEMWKDMEESPKVQEKFLKEIKDVALVNTQIM
RKQNSLIAVIEKVLLVYLDDQTSHHSLSQSVIHNKALALFNSTKAERDEEAAEEKCEASR
GWFMRFKERSHLHNIKMQGEAASTEAEASTSYPEDLAKILEGGYDKQQIFNVDRTALYWK
KMPSRTLIVREKLMPGSKASKGQVDSLDKD

>gi568815593f:65463311_65687393|GENSCAN_predicted_CDS_2|633_bp
atgaatcaggaggatctagatccggatagtactacagatgtgggagatgttacaaatact
gaagaagaacttattagagaatgtgaagaaatgtggaaagatatggaagaatctcccaaa
gtgcaggaaaaatttttaaaggaaattaaagatgttgctctagtgaacacacaaattatg
agaaaacagaatagccttattgctgttatagagaaagttttactagtctacttagatgat
caaaccagccatcattccctaagccaaagcgtaatccacaacaaagccctagctcttttc
aattctacaaaggctgagagagatgaggaagctgcagaagaaaagtgtgaagctagcaga
ggttggttcatgaggtttaaggaaagaagccatctccataacataaaaatgcaaggggaa
gcagcaagtactgaggcagaagcgtcaacaagttatccagaagatctagctaagatactt
gaaggtggctatgataaacagcaaattttcaatgtagacagaacagccctctattggaag
aagatgccatctaggactcttatagttagagagaagttgatgcctggctccaaagcttca
aaaggacaggttgactctcttgataaggactag

>gi568815593f:65463311_65687393|GENSCAN_predicted_peptide_3|618_aa
MAAESGSDFQQRRRRRRDPEEPEKTELSERELAVAVAVSQENDEENEERWVGPLPVEATL
AKKRKVLEFERVYLDNLPSASMYERSYMHRDVITHVNVLISFIEIGVIESIAVSSEGALF
CSVGDDKAMKVFDVVNFDMINMLKLGYFPGQCEWIYCPGDAISSVAASEKSTGKIFIYDG
RGDNQPLHIFDKLHTSPLTQIRLNPVYKAVVSSDKSGMIEYWTGPPHEYKFPKNVNWEYK
TDTDLYEFAKCKAYPTSVCFSPDGKKIATIGSDRKVRIFRFVTGKLMRVFDESLSMFTEL
QQMRQQLPDMEFGRRMAVERELEKVDAVRLINIVFDETGHFVLYGTMLGIKVINVETNRC
VRILGKQENIRVMQLALFQGIAKKHRAATTIEMKASENPVLQNIQADPTIVCTSFKKNRF
YMFTKREPEDTKSADSDRDVFNEKPSKEEVMAATQAEGPKRVSDSAIIHTSMGDIHTKLF
PVECPKTVENFCVHSRNGYYNGHTFHRIIKGFMIQTGDPTGTGMGGESIWGGEFEDEFHS
TLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVKVN
PKTDKPYEDVSIINITVK

>gi568815593f:65463311_65687393|GENSCAN_predicted_CDS_3|1857_bp
atggcggcggaaagtggtagcgattttcagcagagacgtagaaggcgccgggacccggag
gaaccggaaaaaacagaactcagcgaaagagagctggcagtagcagtggcggtgtcccag
gagaacgatgaggagaacgaagagcgctgggttggacctttacctgtggaggcaacactg
gccaagaagaggaaagtcttagagtttgaaagagtctatcttgataatctccccagtgca
tccatgtatgagcgcagttacatgcatagagatgttatcacccatgtgaatgttttaatt
tcatttattgaaataggagttattgagagtattgcagttagctctgagggagcattgttc
tgttctgtgggtgatgataaagcaatgaaggtgtttgatgtagtgaactttgacatgatc
aacatgctgaaacttggctattttcctggacagtgtgagtggatctattgcccaggggat
gcaatttcttcagttgctgcttccgaaaagagtacaggaaaaattttcatttatgatggc
cgaggagataaccagccacttcatatttttgacaaactccatacatcacctcttactcag
atacggctaaacccagtttacaaagcagtagtgtcttctgacaaatctgggatgattgaa
tactggactgggcctcctcatgaatataaattccccaaaaatgtgaactgggaatataaa
actgacactgatttatatgaatttgccaagtgtaaggcttatccaaccagcgtatgtttt
tcaccagatgggaagaaaatagctactattggttctgatagaaaagttagaattttcaga
tttgtaactggaaaactcatgagagtctttgatgaatcactaagcatgtttactgaactg
caacagatgaggcaacagttaccagacatggaatttggccgacgaatggctgtagaacgt
gagttggagaaggttgatgctgtaagattaattaatatagtttttgatgaaactggacac
ttcgtgctgtatggaacaatgctgggcattaaagttataaatgtagagacaaaccggtgt
gtgcggattttaggcaaacaagaaaatattagagtgatgcaattggctttgttccagggg
atagccaaaaagcatcgtgctgcaactactatagaaatgaaagcttctgaaaatcctgtt
cttcagaatattcaagctgacccaacaatagtctgtacatcattcaaaaagaatagattt
tatatgtttaccaaacgagaaccagaagatacgaaaagtgcagattctgatcgagatgtt
tttaatgagaaaccttctaaagaagaagtcatggcagctactcaagctgaaggacctaaa
cgagtttcggacagtgccattatccacaccagcatgggagacattcacaccaaacttttt
cctgttgagtgccctaagacagtggaaaacttctgtgttcacagcagaaatggttattat
aatgggcatacatttcaccgtataattaagggctttatgattcagactggagatccaaca
ggtactggtatgggaggagaaagcatatggggaggagaatttgaagatgaatttcattca
acattacgacatgacaggccatacacactcagcatggctaacgcgggatcaaatactaat
ggatcccagtttttcataacggtagtaccaacgccttggcttgataataagcatacagta
tttggacgagtgactaaaggaatggaagttgtacagaggatctccaacgtcaaagtcaat
cccaaaacagataagccctatgaggatgtcagcatcataaatattactgtcaagtaa

>gi568815593f:65463311_65687393|GENSCAN_predicted_peptide_4|511_aa
MVLECGVCEDVFSLQGDKVPRLLLCGHTVCHDCLTRLPLHGRAIRCPFDRQVTDLGDSGV
WGLKKNFALLELLERLQNGPIGQYGAAEESIGISGESIIRCDEDEAHLASVYCTVCATHL
CSECSQVTHSTKTLAKHRRVPLADKPHEKTMCSQHQVHAIEFVCLEEGCQTSPLMCCVCK
EYGKHQGHKHSVLEPEANQIRASILDMAHCIRTFTEEISDYSRKLVGIVQHIEGGEQIVE
DGIGMAHTEHVPGTAENARSCIRAYFYDLHETLCRQEEMALSVVDAHVREKLIWLRQQQE
DMTILLSEVSAACLHCEKTLQQDDCRVVLAKQEITRLLETLQKQQQQFTEVADHIQLDAS
IPVTFTKDNRVHIGPKMEIRVVTLGLDGAGKTTILFKLKQDEFMQPIPTIAVVFVVDSSH
RDRISEAHSELAKLLTEKELRDALLLIFANKQDVAGALSVEEITELLSLHKLCCGRSWYI
QGCDARSGMGLYEGLDWLSRQLVAAGVLDVA

>gi568815593f:65463311_65687393|GENSCAN_predicted_CDS_4|1536_bp
atggtgctagagtgtggagtttgtgaagatgtcttttctttgcaaggagacaaagttccc
cgtcttttgctttgtggccataccgtctgtcatgactgtctcactcgcctacctcttcat
ggaagagcaatccgttgcccatttgatcgacaagtaacagacctaggtgattcaggtgtc
tggggattgaaaaaaaattttgctttattggagcttttggaacgactgcagaatgggcct
attggtcagtatggagctgcagaagaatccattgggatatctggagagagcatcattcgt
tgtgatgaagatgaagctcaccttgcctctgtatattgcactgtgtgtgcaactcatttg
tgctctgagtgttctcaagttactcattctacaaagacattagcaaagcacaggcgagtt
cctctagctgataaacctcatgagaaaactatgtgctctcagcaccaggtgcatgccatt
gagtttgtttgcttggaagaaggttgtcaaactagcccactcatgtgctgtgtctgcaaa
gaatatggaaaacaccagggtcacaagcattcagtattggaaccagaagctaatcagatc
cgagcatcaattttagatatggctcactgcatacggaccttcacagaggaaatctcagat
tattccagaaaattagttggaattgtgcagcacattgaaggaggagaacaaatcgtggaa
gatggaattggaatggctcacacagaacatgtaccagggactgcagagaatgcccggtca
tgtattcgagcttatttttatgatctacatgaaactctgtgtcgtcaagaagaaatggct
ctaagtgttgttgatgctcatgttcgtgaaaaattgatttggctcaggcagcaacaagaa
gatatgactattttgttgtcagaggtttctgcagcctgcctccactgtgaaaagactttg
cagcaggatgattgtagagttgtcttggcaaaacaggaaattacaaggttactggaaaca
ttgcagaaacagcagcagcagtttacagaagttgcagatcacattcagttggatgccagc
atccctgtcacttttacaaaggataatcgagttcacattggaccaaaaatggaaattcgg
gtcgttacgttaggattggatggtgctggaaaaactactatcttgtttaagttaaaacag
gatgaattcatgcagcccattccaacaattgctgttgtgtttgttgtagatagcagtcat
agagacagaattagtgaagcacacagcgaacttgcaaagttgttaacggaaaaagaactc
cgagatgctctgctcctgatttttgctaacaaacaggatgttgctggagcactgtcagta
gaagaaatcactgaactactcagtctccataaattatgctgtggccgtagctggtatatt
cagggctgtgatgctcgaagtggtatgggactgtatgaagggttggactggctctcacgg
caacttgtagctgctggagtattggatgttgcttga

>gi568815593f:65463311_65687393|GENSCAN_predicted_peptide_5|110_aa
MATLVVNKLGAGVDSGRQGSRGTAVVKVRDLACSILHHRPPFGSSWRPGGIAAAQASIGG
MRGLWAPFGITSLVLSSASFLSYGLKLPGLLLMTCHHRDICEKELAGQWQ

>gi568815593f:65463311_65687393|GENSCAN_predicted_CDS_5|333_bp
atggctaccctggttgtaaacaagctcggagcgggagtagacagtggccggcagggcagc
cgggggacagctgtagtgaaggtgagggaccttgcgtgctctattctccaccatcggcct
cccttcggttcatcctggagacctggcggcatcgccgcggcccaggcttcgataggtggg
atgcgcggcctctgggccccttttggcattacaagtctcgtcctgtcctctgcatccttt
ctctcctatggcctgaaattgcctggtcttctgctcatgacatgtcatcatcgggacatt
tgtgaaaaggagcttgcgggccagtggcagtga

>gi568815593f:65463311_65687393|GENSCAN_predicted_peptide_6|345_aa
MTTEVILHYRPCESDPTQLPKIAEKAIQDFPTRPLSRFIPWFPYDGSKLPLRPKRSPPVI
SEEAAEDVKQYLTISEHDAKSHSYDCTVDLLEFQPSLKKQHLTWSHTLKEQTNSGNLVMR
LTKPTLFTNIPVTCEEKDLPGDLFNQLMRDDPSTVNGAEVLMLGEMLTLPQNFGNIFLGE
TFSSYISVHNDSNQVVKDILVKADLQTSSQRLNLSASNAAVAELKPDCCIDDVIHHEVKE
IGTHIVSTFGSRAYLQPMDTRQYLYCLKPKNEFAEKAGIIKGVTVIGKLDIVWKTNLGER
GRLQTSQLQRMAPGYGDVRLSLEAIPDTVNLEEPFHITCKITNCR

>gi568815593f:65463311_65687393|GENSCAN_predicted_CDS_6|1038_bp
atgactacagaagtaatattacattatcgaccatgtgagagtgatcccacacaactgcca
aaaattgcagaaaaagcaattcaagactttcctactcgtccgctatcaagatttatacct
tggtttccatatgatgggtccaagcttccactcagacctaaaagatcaccacctgtgatt
tctgaagaggcagctgaagatgtgaaacagtacttaaccatttcagaacatgatgctaag
tcacacagttatgattgcacagtagatctattggagtttcaacctagcttgaaaaagcag
catttaacctggtcacacacactgaaggaacagactaattctggaaatctggtgatgcgg
ctgactaagcctactttattcaccaatatcccagtaacatgtgaagagaaagacttacct
ggagatctctttaaccagctgatgagagatgatccttcaaccgttaatggtgcagaagtt
ttaatgttgggagaaatgctgactttaccacagaattttgggaatatatttttgggagag
accttttccagttatatcagcgttcataatgatagcaatcaagttgtaaaagacatatta
gtaaaagctgatcttcagacaagttctcagcgtttaaatctttcagcctccaatgctgca
gtggctgaacttaaaccggattgttgtattgatgatgtcatacatcatgaagtcaaagaa
attggaacacacattgtgtctacgtttgggtcaagagcatatttgcaaccaatggataca
cgccagtacttatactgcctaaagccaaagaatgaatttgcagaaaaagcaggcatcatt
aagggagtaacagtaattggaaaattggatatagtatggaaaacaaatctaggtgaaagg
ggaaggttacagaccagccaacttcaaagaatggctccaggttatggagatgttaggttg
tctttggaggcaataccagataccgtaaaccttgaagaaccttttcatattacctgtaaa
ataacaaactgcaggtaa

>gi568815593f:65463311_65687393|GENSCAN_predicted_peptide_7|159_aa
XAAAQSKLGHYTDAIKDCEKAIAIDSKYSKAYGRMGLALTALNKFEEAVTSYQKALDLDP
ENDSYKSNLKIAEQKLREVSSPAASLMQNPQVQQLMSGMMTNAIGGPAAGVGGLTDLSSL
IQAGQQFAQQIQQQNPELIEQLRNHIRSRSFSSSAEEHS

>gi568815593f:65463311_65687393|GENSCAN_predicted_CDS_7|480_bp
nnggctgctgctcagagcaaattaggtcactacacagatgcgataaaggattgtgaaaaa
gcaatagcaattgattcaaagtacagcaaggcctatgggagaatggggctggccctcact
gccttgaataaatttgaagaagcagttacaagttatcaaaaggcattagatcttgaccct
gaaaatgattcctataagtcaaatctgaaaatagcagaacagaagttaagagaggtatcc
agtcctgcggcaagtttaatgcagaaccctcaagttcaacagctaatgtcaggaatgatg
acaaatgccattgggggacctgctgctggagttgggggcctaactgacctgtcaagcctc
atccaagcgggacagcagtttgctcagcagatacagcaacaaaatcctgaacttatagag
caactgagaaatcacatccggagcagatcattcagcagcagcgctgaagagcattcctga