Result of FASTA (omim) for pFN21AE4357
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KE4357, 374 aa
  1>>>pF1KE4357 374 - 374 aa - 374 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 6.0116+/-0.00033; mu= 14.1976+/- 0.021
 mean_var=105.0256+/-21.445, 0's: 0 Z-trim(117.3): 187  B-trim: 60 in 1/53
 Lambda= 0.125149
 statistics sampled from 29058 (29265) to 29058 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.705), E-opt: 0.2 (0.343), width:  16
 Scan time:  8.680

The best scores are:                                      opt bits E(85289)
XP_016885759 (OMIM: 604937) PREDICTED: killer cell ( 374) 2441 451.2 1.8e-126
XP_016885735 (OMIM: 604937) PREDICTED: killer cell ( 374) 2441 451.2 1.8e-126
XP_016885782 (OMIM: 604936) PREDICTED: killer cell ( 330) 2138 396.5 4.8e-110
XP_016885783 (OMIM: 604936) PREDICTED: killer cell ( 277) 1769 329.8 4.8e-90
XP_016882272 (OMIM: 604936) PREDICTED: killer cell ( 253) 1644 307.2 2.8e-83
NP_055033 (OMIM: 604936) killer cell immunoglobuli ( 348) 1644 307.3 3.5e-83
XP_011546672 (OMIM: 604936) PREDICTED: killer cell ( 304) 1608 300.7 2.9e-81
NP_055327 (OMIM: 604952) killer cell immunoglobuli ( 304) 1602 299.6 6.1e-81
XP_016885764 (OMIM: 604953) PREDICTED: killer cell ( 304) 1534 287.4   3e-77
NP_036444 (OMIM: 604953) killer cell immunoglobuli ( 304) 1534 287.4   3e-77
NP_001278624 (OMIM: 604953) killer cell immunoglob ( 338) 1534 287.4 3.3e-77
XP_016885769 (OMIM: 604956) PREDICTED: killer cell ( 304) 1530 286.6   5e-77
XP_016885770 (OMIM: 604956) PREDICTED: killer cell ( 304) 1529 286.5 5.6e-77
NP_036445 (OMIM: 604954) killer cell immunoglobuli ( 304) 1528 286.3 6.4e-77
XP_016885760 (OMIM: 604954) PREDICTED: LOW QUALITY ( 360) 1528 286.3 7.3e-77
XP_016885758 (OMIM: 604937) PREDICTED: killer cell ( 348) 1522 285.2 1.5e-76
NP_055034 (OMIM: 604937) killer cell immunoglobuli ( 348) 1522 285.2 1.5e-76
XP_016885734 (OMIM: 604937) PREDICTED: killer cell ( 348) 1522 285.2 1.5e-76
XP_011525241 (OMIM: 604936) PREDICTED: killer cell ( 235) 1518 284.4 1.8e-76
NP_055328 (OMIM: 604956) killer cell immunoglobuli ( 304) 1513 283.6 4.2e-76
NP_056952 (OMIM: 604938) killer cell immunoglobuli ( 341) 1510 283.1 6.6e-76
XP_011546673 (OMIM: 604936) PREDICTED: killer cell ( 235) 1472 276.1 5.8e-74
NP_036446 (OMIM: 604955) killer cell immunoglobuli ( 304) 1471 276.0   8e-74
NP_001278630 (OMIM: 604953) killer cell immunoglob ( 287) 1418 266.4 5.8e-71
XP_016885732 (OMIM: 604954) PREDICTED: LOW QUALITY ( 454) 1376 259.0 1.6e-68
XP_016885733 (OMIM: 604956) PREDICTED: LOW QUALITY ( 541) 1362 256.5   1e-67
XP_016885756 (OMIM: 604956) PREDICTED: LOW QUALITY ( 541) 1362 256.5   1e-67
XP_016885771 (OMIM: 604956) PREDICTED: LOW QUALITY ( 541) 1362 256.5   1e-67
XP_016882271 (OMIM: 604936) PREDICTED: killer cell ( 295) 1275 240.6 3.5e-63
NP_001309097 (OMIM: 604946,609423) killer cell imm ( 444) 1207 228.5 2.4e-59
NP_037421 (OMIM: 604946,609423) killer cell immuno ( 444) 1207 228.5 2.4e-59
XP_011525242 (OMIM: 604947) PREDICTED: killer cell ( 420) 1200 227.2 5.5e-59
XP_016882273 (OMIM: 604947) PREDICTED: killer cell ( 342) 1198 226.7   6e-59
NP_006728 (OMIM: 604947) killer cell immunoglobuli ( 455) 1199 227.0 6.6e-59
XP_016885763 (OMIM: 604946,609423) PREDICTED: kill ( 397) 1175 222.6 1.2e-57
XP_016885767 (OMIM: 604956) PREDICTED: LOW QUALITY ( 375) 1093 207.8 3.3e-53
NP_001229796 (OMIM: 604947) killer cell immunoglob ( 438) 1091 207.5 4.8e-53
NP_703144 (OMIM: 610095) killer cell immunoglobuli ( 410) 1012 193.2 8.9e-49
XP_016885757 (OMIM: 615727) PREDICTED: killer cell ( 375)  961 184.0 4.9e-46
NP_065396 (OMIM: 605305) killer cell immunoglobuli ( 375)  959 183.6 6.3e-46
XP_016885731 (OMIM: 615727) PREDICTED: killer cell ( 375)  947 181.5 2.8e-45
XP_016885761 (OMIM: 615727) PREDICTED: killer cell ( 375)  947 181.5 2.8e-45
NP_001018091 (OMIM: 615727) killer cell immunoglob ( 375)  941 180.4   6e-45
NP_001074241 (OMIM: 604945) killer cell immunoglob ( 273)  919 176.3 7.4e-44
NP_002246 (OMIM: 604945) killer cell immunoglobuli ( 377)  919 176.4 9.5e-44
NP_001074239 (OMIM: 604945) killer cell immunoglob ( 342)  916 175.8 1.3e-43
XP_016885768 (OMIM: 615727) PREDICTED: killer cell ( 386)  895 172.1 1.9e-42
NP_001268901 (OMIM: 604955) killer cell immunoglob ( 222)  885 170.1 4.5e-42
NP_001268900 (OMIM: 604955) killer cell immunoglob ( 239)  885 170.1 4.7e-42
XP_016885766 (OMIM: 615727) PREDICTED: killer cell ( 363)  811 156.9 6.8e-38


>>XP_016885759 (OMIM: 604937) PREDICTED: killer cell imm  (374 aa)
 initn: 2441 init1: 2441 opt: 2441  Z-score: 2391.6  bits: 451.2 E(85289): 1.8e-126
Smith-Waterman score: 2441; 95.5% identity (97.9% similar) in 374 aa overlap (1-374:1-374)

               10        20        30        40        50        60
pF1KE4 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
       :::.::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
XP_016 MSLMVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVRFEHFLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
       :::: :.:::.::::::::::::::::. : :::::::::::::::::::.:::::::::
XP_016 HREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
       :: ::::::::::: ::::::::.:::::::::::::::::::::::: :. ::::::::
XP_016 VITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHECRFSAGPKVNGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTER
       ::::::::::::::::::::::.:::::::.:::::::::::::::::::::::::::::
XP_016 FQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSKTER
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILFILLFFLLHRWCSNKKNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILFILLFFLLHRWCSNKKNA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 AVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYTE
              310       320       330       340       350       360

              370    
pF1KE4 LPNAESRSKVVSCP
       ::::::::::::::
XP_016 LPNAESRSKVVSCP
              370    

>>XP_016885735 (OMIM: 604937) PREDICTED: killer cell imm  (374 aa)
 initn: 2441 init1: 2441 opt: 2441  Z-score: 2391.6  bits: 451.2 E(85289): 1.8e-126
Smith-Waterman score: 2441; 95.5% identity (97.9% similar) in 374 aa overlap (1-374:1-374)

               10        20        30        40        50        60
pF1KE4 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
       :::.::::::::::::::::::::::::::::::::::::::::::::::::: ::::::
XP_016 MSLMVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVRFEHFLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
       :::: :.:::.::::::::::::::::. : :::::::::::::::::::.:::::::::
XP_016 HREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
       :: ::::::::::: ::::::::.:::::::::::::::::::::::: :. ::::::::
XP_016 VITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHECRFSAGPKVNGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTER
       ::::::::::::::::::::::.:::::::.:::::::::::::::::::::::::::::
XP_016 FQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSKTER
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILFILLFFLLHRWCSNKKNA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILFILLFFLLHRWCSNKKNA
              250       260       270       280       290       300

              310       320       330       340       350       360
pF1KE4 AVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 AVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYTE
              310       320       330       340       350       360

              370    
pF1KE4 LPNAESRSKVVSCP
       ::::::::::::::
XP_016 LPNAESRSKVVSCP
              370    

>>XP_016885782 (OMIM: 604936) PREDICTED: killer cell imm  (330 aa)
 initn: 2403 init1: 1899 opt: 2138  Z-score: 2096.7  bits: 396.5 E(85289): 4.8e-110
Smith-Waterman score: 2138; 95.1% identity (97.6% similar) in 329 aa overlap (1-328:1-329)

               10        20        30        40        50        60
pF1KE4 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
       :::::::::::::::::::::::::::::: :::::::::::::::::::.:::::::::
XP_016 HREGMFNDTLRLIGEHHDGVSKANFSISRMKQDLAGTYRCYGSVTHSPYQLSAPSDPLDI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
       :::::::::::::: ::::::::::::::::::::::::::::::::::::::: :::::
XP_016 VIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGTKVNGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTER
       :::.::::::::::::::::::.:::::::::::::::::::::::::::::::::.:::
XP_016 FQANFPLGPATHGGTYRCFGSFRDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSETER
              190       200       210       220       230       240

              250       260       270       280        290         
pF1KE4 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILF-ILLFFLLHRWCSNKKN
       :::::::::::::::::::::::::::::::.::::::: : : ::::::::::::.:::
XP_016 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHVLIGTSVVKIPFTILLFFLLHRWCSDKKN
              250       260       270       280       290       300

     300       310       320       330       340       350         
pF1KE4 AAVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYT
       ::::::: :::::.::::::::: :::.:                               
XP_016 AAVMDQEPAGNRTVNSEDSDEQDHQEVSYA                              
              310       320       330                              

>>XP_016885783 (OMIM: 604936) PREDICTED: killer cell imm  (277 aa)
 initn: 2034 init1: 1530 opt: 1769  Z-score: 1737.7  bits: 329.8 E(85289): 4.8e-90
Smith-Waterman score: 1769; 94.2% identity (97.1% similar) in 276 aa overlap (54-328:1-276)

            30        40        50        60        70        80   
pF1KE4 GVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLLHREGMFNDTLRLIGEHHDGVSKA
                                     ::::::::::::::::::::::::::::::
XP_016                               MFEHFLLHREGMFNDTLRLIGEHHDGVSKA
                                             10        20        30

            90       100       110       120       130       140   
pF1KE4 NFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDIVIIGLYEKPSLSAQLGPTVLAGE
       ::::::: :::::::::::::::::::.::::::::::::::::::::::: ::::::::
XP_016 NFSISRMKQDLAGTYRCYGSVTHSPYQLSAPSDPLDIVIIGLYEKPSLSAQPGPTVLAGE
               40        50        60        70        80        90

           150       160       170       180       190       200   
pF1KE4 NVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGTFQADFPLGPATHGGTYRCFGSFH
       ::::::::::::::::::::::::::::::: ::::::::.::::::::::::::::::.
XP_016 NVTLSCSSRSSYDMYHLSREGEAHERRLPAGTKVNGTFQANFPLGPATHGGTYRCFGSFR
              100       110       120       130       140       150

           210       220       230       240       250       260   
pF1KE4 DSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTERMFHHVGQACLKLPTSSDPTVSAC
       :::::::::::::::::::::::::::::::::.::::::::::::::::::::::::::
XP_016 DSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSETERMFHHVGQACLKLPTSSDPTVSAC
              160       170       180       190       200       210

           270       280        290       300       310       320  
pF1KE4 QSNPRHLHILIGTSVVIILF-ILLFFLLHRWCSNKKNAAVMDQESAGNRTANSEDSDEQD
       ::::::::.::::::: : : ::::::::::::.:::::::::: :::::.:::::::::
XP_016 QSNPRHLHVLIGTSVVKIPFTILLFFLLHRWCSDKKNAAVMDQEPAGNRTVNSEDSDEQD
              220       230       240       250       260       270

            330       340       350       360       370    
pF1KE4 PQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYTELPNAESRSKVVSCP
        :::.:                                              
XP_016 HQEVSYA                                             
                                                           

>>XP_016882272 (OMIM: 604936) PREDICTED: killer cell imm  (253 aa)
 initn: 1826 init1: 1644 opt: 1644  Z-score: 1616.2  bits: 307.2 E(85289): 2.8e-83
Smith-Waterman score: 1644; 99.6% identity (100.0% similar) in 239 aa overlap (1-239:1-239)

               10        20        30        40        50        60
pF1KE4 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::. 
XP_016 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTDT
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KE4 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILFILLFFLLHRWCSNKKNA
                                                                   
XP_016 PTAKGIWAQHRAQ                                               
              250                                                  

>>NP_055033 (OMIM: 604936) killer cell immunoglobulin-li  (348 aa)
 initn: 1642 init1: 1642 opt: 1644  Z-score: 1614.3  bits: 307.3 E(85289): 3.5e-83
Smith-Waterman score: 2311; 92.8% identity (93.0% similar) in 374 aa overlap (1-374:1-348)

               10        20        30        40        50        60
pF1KE4 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTER
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::  
NP_055 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKT--
              190       200       210       220       230          

              250       260       270       280       290       300
pF1KE4 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILFILLFFLLHRWCSNKKNA
                               .:::::::::::::::::::::::::::::::::::
NP_055 ------------------------GNPRHLHILIGTSVVIILFILLFFLLHRWCSNKKNA
                              240       250       260       270    

              310       320       330       340       350       360
pF1KE4 AVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYTE
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 AVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYTE
          280       290       300       310       320       330    

              370    
pF1KE4 LPNAESRSKVVSCP
       ::::::::::::::
NP_055 LPNAESRSKVVSCP
          340        

>>XP_011546672 (OMIM: 604936) PREDICTED: killer cell imm  (304 aa)
 initn: 2171 init1: 1591 opt: 1608  Z-score: 1580.0  bits: 300.7 E(85289): 2.9e-81
Smith-Waterman score: 1886; 86.9% identity (89.7% similar) in 329 aa overlap (1-328:1-303)

               10        20        30        40        50        60
pF1KE4 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_011 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
       :::::::::::::::::::::::::::::: :::::::::::::::::::.:::::::::
XP_011 HREGMFNDTLRLIGEHHDGVSKANFSISRMKQDLAGTYRCYGSVTHSPYQLSAPSDPLDI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
       :::::::::::::: ::::::::::::::::::::::::::::::::::::::: :::::
XP_011 VIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGTKVNGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTER
       :::.::::::::::::::::::.:::::::::::::::::::::::::::::::::.:  
XP_011 FQANFPLGPATHGGTYRCFGSFRDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSET--
              190       200       210       220       230          

              250       260       270       280        290         
pF1KE4 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILF-ILLFFLLHRWCSNKKN
                               .::::::.::::::: : : ::::::::::::.:::
XP_011 ------------------------GNPRHLHVLIGTSVVKIPFTILLFFLLHRWCSDKKN
                              240       250       260       270    

     300       310       320       330       340       350         
pF1KE4 AAVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYT
       ::::::: :::::.::::::::: :::.:                               
XP_011 AAVMDQEPAGNRTVNSEDSDEQDHQEVSYA                              
          280       290       300                                  

>>NP_055327 (OMIM: 604952) killer cell immunoglobulin-li  (304 aa)
 initn: 2165 init1: 1585 opt: 1602  Z-score: 1574.2  bits: 299.6 E(85289): 6.1e-81
Smith-Waterman score: 1880; 86.6% identity (89.4% similar) in 329 aa overlap (1-328:1-303)

               10        20        30        40        50        60
pF1KE4 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
       ::: ::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_055 MSLTVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
       :::::::::::::::::::::::::::::: :::::::::::::::::::.:::::::::
NP_055 HREGMFNDTLRLIGEHHDGVSKANFSISRMKQDLAGTYRCYGSVTHSPYQLSAPSDPLDI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
       :::::::::::::: ::::::::::::::::::::::::::::::::::::::: :::::
NP_055 VIIGLYEKPSLSAQPGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGTKVNGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTER
       :::.::::::::::::::::::.:::::::::::::::::::::::::::::::::.:  
NP_055 FQANFPLGPATHGGTYRCFGSFRDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSET--
              190       200       210       220       230          

              250       260       270       280        290         
pF1KE4 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILF-ILLFFLLHRWCSNKKN
                               .::::::.::::::: : : ::::::::::::.:::
NP_055 ------------------------GNPRHLHVLIGTSVVKIPFTILLFFLLHRWCSDKKN
                              240       250       260       270    

     300       310       320       330       340       350         
pF1KE4 AAVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYT
       ::::::: :::::.::::::::: :::.:                               
NP_055 AAVMDQEPAGNRTVNSEDSDEQDHQEVSYA                              
          280       290       300                                  

>>XP_016885764 (OMIM: 604953) PREDICTED: killer cell imm  (304 aa)
 initn: 1884 init1: 1517 opt: 1534  Z-score: 1507.8  bits: 287.4 E(85289): 3e-77
Smith-Waterman score: 1817; 83.9% identity (88.1% similar) in 329 aa overlap (1-328:1-303)

               10        20        30        40        50        60
pF1KE4 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
       :::.:::::::::::::::::::::::::::::::: :::::::::::::::: ::::::
XP_016 MSLMVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGPLVKSEETVILQCWSDVRFEHFLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
       :::: ..:::.::::::::::::::::. : :::::::::::::::::::.:::::::::
XP_016 HREGKYKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
       :: ::::::::::: ::::::::.::::::::::::::::::::::::::. ::::::::
XP_016 VITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKVNGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTER
       ::::::::::::::::::::::.:::::::.:::::::::::::::::::::::::::  
XP_016 FQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSKT--
              190       200       210       220       230          

              250       260       270       280        290         
pF1KE4 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILF-ILLFFLLHRWCSNKKN
                               .::::::.::::::: : : ::::::::::::::::
XP_016 ------------------------GNPRHLHVLIGTSVVKIPFTILLFFLLHRWCSNKKN
                              240       250       260       270    

     300       310       320       330       340       350         
pF1KE4 AAVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYT
       ::::::: :::::.::::::::: :::.:                               
XP_016 AAVMDQEPAGNRTVNSEDSDEQDHQEVSYA                              
          280       290       300                                  

>>NP_036444 (OMIM: 604953) killer cell immunoglobulin-li  (304 aa)
 initn: 1884 init1: 1517 opt: 1534  Z-score: 1507.8  bits: 287.4 E(85289): 3e-77
Smith-Waterman score: 1817; 83.9% identity (88.1% similar) in 329 aa overlap (1-328:1-303)

               10        20        30        40        50        60
pF1KE4 MSLLVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGRLVKSEETVILQCWSDVMFEHFLL
       :::.:::::::::::::::::::::::::::::::: :::::::::::::::: ::::::
NP_036 MSLMVVSMACVGFFLLQGAWPHEGVHRKPSLLAHPGPLVKSEETVILQCWSDVRFEHFLL
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KE4 HREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTHSPYQVSAPSDPLDI
       :::: ..:::.::::::::::::::::. : :::::::::::::::::::.:::::::::
NP_036 HREGKYKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTHSPYQLSAPSDPLDI
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KE4 VIIGLYEKPSLSAQLGPTVLAGENVTLSCSSRSSYDMYHLSREGEAHERRLPAGPKVNGT
       :: ::::::::::: ::::::::.::::::::::::::::::::::::::. ::::::::
NP_036 VITGLYEKPSLSAQPGPTVLAGESVTLSCSSRSSYDMYHLSREGEAHERRFSAGPKVNGT
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KE4 FQADFPLGPATHGGTYRCFGSFHDSPYEWSKSSDPLLVSVTGNPSNSWPSPTEPSSKTER
       ::::::::::::::::::::::.:::::::.:::::::::::::::::::::::::::  
NP_036 FQADFPLGPATHGGTYRCFGSFRDSPYEWSNSSDPLLVSVTGNPSNSWPSPTEPSSKT--
              190       200       210       220       230          

              250       260       270       280        290         
pF1KE4 MFHHVGQACLKLPTSSDPTVSACQSNPRHLHILIGTSVVIILF-ILLFFLLHRWCSNKKN
                               .::::::.::::::: : : ::::::::::::::::
NP_036 ------------------------GNPRHLHVLIGTSVVKIPFTILLFFLLHRWCSNKKN
                              240       250       260       270    

     300       310       320       330       340       350         
pF1KE4 AAVMDQESAGNRTANSEDSDEQDPQEVTYTQLNHCVFTQRKITRPSQRPKTPPTDIIVYT
       ::::::: :::::.::::::::: :::.:                               
NP_036 AAVMDQEPAGNRTVNSEDSDEQDHQEVSYA                              
          280       290       300                                  




374 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sun Nov  6 02:05:52 2016 done: Sun Nov  6 02:05:54 2016
 Total Scan time:  8.680 Total Display time:  0.030

Function used was FASTA [36.3.4 Apr, 2011]
Inquiries or Suggestions ?
Send a message to flexiclone AT kazusagt.com