Result of FASTA (omim) for pFN21AB5440
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5440, 327 aa
  1>>>pF1KB5440 327 - 327 aa - 327 aa
Library: /omim/omim.rfq.tfa
  60827320 residues in 85289 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.4009+/-0.000278; mu= 17.6626+/- 0.018
 mean_var=88.3276+/-17.878, 0's: 0 Z-trim(120.5): 39  B-trim: 1192 in 1/57
 Lambda= 0.136466
 statistics sampled from 35677 (35716) to 35677 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.763), E-opt: 0.2 (0.419), width:  16
 Scan time:  8.190

The best scores are:                                      opt bits E(85289)
NP_009186 (OMIM: 130070,604327) beta-1,4-galactosy ( 327) 2315 464.9  1e-130
XP_016864488 (OMIM: 130070,604327) PREDICTED: beta ( 213) 1484 301.2 1.3e-81
XP_006714879 (OMIM: 130070,604327) PREDICTED: beta ( 167) 1185 242.2 5.7e-64
XP_016881578 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 338)  433 94.4 3.6e-19
XP_006722642 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 338)  433 94.4 3.6e-19
NP_001317499 (OMIM: 604017) beta-1,4-galactosyltra ( 343)  433 94.4 3.6e-19
XP_006722641 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 344)  433 94.4 3.6e-19
XP_005258444 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 370)  433 94.5 3.8e-19
NP_004766 (OMIM: 604017) beta-1,4-galactosyltransf ( 382)  433 94.5 3.9e-19
NP_001488 (OMIM: 137060,607091) beta-1,4-galactosy ( 398)  430 93.9   6e-19
NP_004767 (OMIM: 604016) beta-1,4-galactosyltransf ( 388)  426 93.1   1e-18
XP_016881580 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 269)  416 91.0 3.1e-18
XP_016881579 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 274)  416 91.0 3.1e-18
NP_003770 (OMIM: 604014) beta-1,4-galactosyltransf ( 393)  405 89.0 1.8e-17
NP_001186803 (OMIM: 604014) beta-1,4-galactosyltra ( 393)  405 89.0 1.8e-17
NP_001186802 (OMIM: 604014) beta-1,4-galactosyltra ( 393)  405 89.0 1.8e-17
XP_005245623 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 393)  405 89.0 1.8e-17
XP_006713864 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344)  396 87.1 5.6e-17
NP_997708 (OMIM: 604015) beta-1,4-galactosyltransf ( 344)  396 87.1 5.6e-17
XP_011511562 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344)  396 87.1 5.6e-17
XP_005247912 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344)  396 87.1 5.6e-17
XP_006713863 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344)  396 87.1 5.6e-17
XP_006713862 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344)  396 87.1 5.6e-17
NP_003769 (OMIM: 604015) beta-1,4-galactosyltransf ( 344)  396 87.1 5.6e-17
XP_006713861 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 344)  396 87.1 5.6e-17
XP_011508395 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 310)  395 86.9   6e-17
XP_016858203 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 310)  395 86.9   6e-17
XP_016858205 (OMIM: 604013) PREDICTED: beta-1,4-ga ( 372)  387 85.4   2e-16
XP_016858206 (OMIM: 604013) PREDICTED: beta-1,4-ga ( 372)  387 85.4   2e-16
NP_003771 (OMIM: 604013) beta-1,4-galactosyltransf ( 372)  387 85.4   2e-16
NP_001005417 (OMIM: 604013) beta-1,4-galactosyltra ( 372)  387 85.4   2e-16
NP_085076 (OMIM: 604013) beta-1,4-galactosyltransf ( 401)  387 85.4 2.1e-16
XP_016881581 (OMIM: 604017) PREDICTED: beta-1,4-ga ( 202)  345 76.9   4e-14
XP_005251497 (OMIM: 137060,607091) PREDICTED: beta ( 357)  232 54.9   3e-07
XP_016862890 (OMIM: 604015) PREDICTED: beta-1,4-ga ( 303)  229 54.2   4e-07
XP_016858204 (OMIM: 604014) PREDICTED: beta-1,4-ga ( 227)  227 53.7 4.3e-07


>>NP_009186 (OMIM: 130070,604327) beta-1,4-galactosyltra  (327 aa)
 initn: 2315 init1: 2315 opt: 2315  Z-score: 2467.9  bits: 464.9 E(85289): 1e-130
Smith-Waterman score: 2315; 100.0% identity (100.0% similar) in 327 aa overlap (1-327:1-327)

               10        20        30        40        50        60
pF1KB5 MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 VRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 VRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 RKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 RKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 GPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 QLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
NP_009 QLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTAL
              250       260       270       280       290       300

              310       320       
pF1KB5 SVGGAPCTVLNIMLDCDKTATPWCTFS
       :::::::::::::::::::::::::::
NP_009 SVGGAPCTVLNIMLDCDKTATPWCTFS
              310       320       

>>XP_016864488 (OMIM: 130070,604327) PREDICTED: beta-1,4  (213 aa)
 initn: 1484 init1: 1484 opt: 1484  Z-score: 1586.2  bits: 301.2 E(85289): 1.3e-81
Smith-Waterman score: 1484; 100.0% identity (100.0% similar) in 213 aa overlap (115-327:1-213)

           90       100       110       120       130       140    
pF1KB5 EEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAAL
                                     ::::::::::::::::::::::::::::::
XP_016                               MRRFLSRKKIRHHIYVLNQVDHFRFNRAAL
                                             10        20        30

          150       160       170       180       190       200    
pF1KB5 INVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEAGPFHVASPELHPLYHYKTYVGGIL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 INVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEAGPFHVASPELHPLYHYKTYVGGIL
               40        50        60        70        80        90

          210       220       230       240       250       260    
pF1KB5 LLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWR
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 LLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWR
              100       110       120       130       140       150

          270       280       290       300       310       320    
pF1KB5 KRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWC
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_016 KRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWC
              160       170       180       190       200       210

          
pF1KB5 TFS
       :::
XP_016 TFS
          

>>XP_006714879 (OMIM: 130070,604327) PREDICTED: beta-1,4  (167 aa)
 initn: 1185 init1: 1185 opt: 1185  Z-score: 1269.5  bits: 242.2 E(85289): 5.7e-64
Smith-Waterman score: 1185; 100.0% identity (100.0% similar) in 167 aa overlap (161-327:1-167)

              140       150       160       170       180       190
pF1KB5 LNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEAGPFHVASPEL
                                     ::::::::::::::::::::::::::::::
XP_006                               MHDVDLLPLNEELDYGFPEAGPFHVASPEL
                                             10        20        30

              200       210       220       230       240       250
pF1KB5 HPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITT
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 HPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGITT
               40        50        60        70        80        90

              260       270       280       290       300       310
pF1KB5 GYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTALSVGGAPCTVL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
XP_006 GYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTALSVGGAPCTVL
              100       110       120       130       140       150

              320       
pF1KB5 NIMLDCDKTATPWCTFS
       :::::::::::::::::
XP_006 NIMLDCDKTATPWCTFS
              160       

>>XP_016881578 (OMIM: 604017) PREDICTED: beta-1,4-galact  (338 aa)
 initn: 404 init1: 202 opt: 433  Z-score: 465.3  bits: 94.4 E(85289): 3.6e-19
Smith-Waterman score: 433; 35.0% identity (61.3% similar) in 217 aa overlap (80-292:99-311)

      50        60        70        80        90       100         
pF1KB5 QLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELL
                                     :  ::.        ..:::.:::.: :.: 
XP_016 PYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLP
       70        80        90       100       110       120        

     110       120       130       140       150         160       
pF1KB5 VFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNST--DYIAMHDVDLL
       .:  :.  .:......  .::..:.    :::: :.:::: :. ...  : . .:::: :
XP_016 IFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHL
      130       140       150       160       170       180        

       170       180       190         200       210       220     
pF1KB5 PLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWG
       : :..  ::  :  : : :.   . .:   :: . ::.  :. ...:  ::. : :::::
XP_016 PENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWG
      190       200        210       220       230       240       

         230       240       250       260       270       280     
pF1KB5 REDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREG
        :::... :.. :: .. :: :    ::.. : :    .   . ..   ..:.  .:   
XP_016 GEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYID---
       250       260       270       280       290       300       

         290       300       310       320       
pF1KB5 GLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
       :::.. :                                   
XP_016 GLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY        
          310       320       330                

>>XP_006722642 (OMIM: 604017) PREDICTED: beta-1,4-galact  (338 aa)
 initn: 404 init1: 202 opt: 433  Z-score: 465.3  bits: 94.4 E(85289): 3.6e-19
Smith-Waterman score: 433; 35.0% identity (61.3% similar) in 217 aa overlap (80-292:99-311)

      50        60        70        80        90       100         
pF1KB5 QLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELL
                                     :  ::.        ..:::.:::.: :.: 
XP_006 PYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLP
       70        80        90       100       110       120        

     110       120       130       140       150         160       
pF1KB5 VFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNST--DYIAMHDVDLL
       .:  :.  .:......  .::..:.    :::: :.:::: :. ...  : . .:::: :
XP_006 IFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHL
      130       140       150       160       170       180        

       170       180       190         200       210       220     
pF1KB5 PLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWG
       : :..  ::  :  : : :.   . .:   :: . ::.  :. ...:  ::. : :::::
XP_006 PENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWG
      190       200        210       220       230       240       

         230       240       250       260       270       280     
pF1KB5 REDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREG
        :::... :.. :: .. :: :    ::.. : :    .   . ..   ..:.  .:   
XP_006 GEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYID---
       250       260       270       280       290       300       

         290       300       310       320       
pF1KB5 GLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
       :::.. :                                   
XP_006 GLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY        
          310       320       330                

>>NP_001317499 (OMIM: 604017) beta-1,4-galactosyltransfe  (343 aa)
 initn: 404 init1: 202 opt: 433  Z-score: 465.2  bits: 94.4 E(85289): 3.6e-19
Smith-Waterman score: 433; 35.0% identity (61.3% similar) in 217 aa overlap (80-292:104-316)

      50        60        70        80        90       100         
pF1KB5 QLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELL
                                     :  ::.        ..:::.:::.: :.: 
NP_001 PYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLP
            80        90       100       110       120       130   

     110       120       130       140       150         160       
pF1KB5 VFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNST--DYIAMHDVDLL
       .:  :.  .:......  .::..:.    :::: :.:::: :. ...  : . .:::: :
NP_001 IFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHL
           140       150       160       170       180       190   

       170       180       190         200       210       220     
pF1KB5 PLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWG
       : :..  ::  :  : : :.   . .:   :: . ::.  :. ...:  ::. : :::::
NP_001 PENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWG
           200        210       220       230       240       250  

         230       240       250       260       270       280     
pF1KB5 REDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREG
        :::... :.. :: .. :: :    ::.. : :    .   . ..   ..:.  .:   
NP_001 GEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYID---
            260       270       280       290       300            

         290       300       310       320       
pF1KB5 GLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
       :::.. :                                   
NP_001 GLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY        
     310       320       330       340           

>>XP_006722641 (OMIM: 604017) PREDICTED: beta-1,4-galact  (344 aa)
 initn: 404 init1: 202 opt: 433  Z-score: 465.2  bits: 94.4 E(85289): 3.6e-19
Smith-Waterman score: 433; 35.0% identity (61.3% similar) in 217 aa overlap (80-292:105-317)

      50        60        70        80        90       100         
pF1KB5 QLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELL
                                     :  ::.        ..:::.:::.: :.: 
XP_006 NGTGGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLP
           80        90       100       110       120       130    

     110       120       130       140       150         160       
pF1KB5 VFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNST--DYIAMHDVDLL
       .:  :.  .:......  .::..:.    :::: :.:::: :. ...  : . .:::: :
XP_006 IFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHL
          140       150       160       170       180       190    

       170       180       190         200       210       220     
pF1KB5 PLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWG
       : :..  ::  :  : : :.   . .:   :: . ::.  :. ...:  ::. : :::::
XP_006 PENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWG
          200        210       220       230       240       250   

         230       240       250       260       270       280     
pF1KB5 REDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREG
        :::... :.. :: .. :: :    ::.. : :    .   . ..   ..:.  .:   
XP_006 GEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYID---
           260       270       280       290       300       310   

         290       300       310       320       
pF1KB5 GLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
       :::.. :                                   
XP_006 GLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY        
              320       330       340            

>>XP_005258444 (OMIM: 604017) PREDICTED: beta-1,4-galact  (370 aa)
 initn: 404 init1: 202 opt: 433  Z-score: 464.7  bits: 94.5 E(85289): 3.8e-19
Smith-Waterman score: 433; 35.0% identity (61.3% similar) in 217 aa overlap (80-292:131-343)

      50        60        70        80        90       100         
pF1KB5 QLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELL
                                     :  ::.        ..:::.:::.: :.: 
XP_005 PYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLP
              110       120       130       140       150       160

     110       120       130       140       150         160       
pF1KB5 VFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNST--DYIAMHDVDLL
       .:  :.  .:......  .::..:.    :::: :.:::: :. ...  : . .:::: :
XP_005 IFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHL
              170       180       190       200       210       220

       170       180       190         200       210       220     
pF1KB5 PLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWG
       : :..  ::  :  : : :.   . .:   :: . ::.  :. ...:  ::. : :::::
XP_005 PENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWG
              230        240       250       260       270         

         230       240       250       260       270       280     
pF1KB5 REDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREG
        :::... :.. :: .. :: :    ::.. : :    .   . ..   ..:.  .:   
XP_005 GEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYID---
     280       290       300       310       320       330         

         290       300       310       320       
pF1KB5 GLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
       :::.. :                                   
XP_005 GLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY        
        340       350       360       370        

>>NP_004766 (OMIM: 604017) beta-1,4-galactosyltransferas  (382 aa)
 initn: 404 init1: 202 opt: 433  Z-score: 464.5  bits: 94.5 E(85289): 3.9e-19
Smith-Waterman score: 433; 35.0% identity (61.3% similar) in 217 aa overlap (80-292:143-355)

      50        60        70        80        90       100         
pF1KB5 QLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELL
                                     :  ::.        ..:::.:::.: :.: 
NP_004 PYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLP
            120       130       140       150       160       170  

     110       120       130       140       150         160       
pF1KB5 VFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNST--DYIAMHDVDLL
       .:  :.  .:......  .::..:.    :::: :.:::: :. ...  : . .:::: :
NP_004 IFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHL
            180       190       200       210       220       230  

       170       180       190         200       210       220     
pF1KB5 PLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWG
       : :..  ::  :  : : :.   . .:   :: . ::.  :. ...:  ::. : :::::
NP_004 PENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWG
            240        250       260       270       280       290 

         230       240       250       260       270       280     
pF1KB5 REDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREG
        :::... :.. :: .. :: :    ::.. : :    .   . ..   ..:.  .:   
NP_004 GEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYID---
             300       310       320       330       340           

         290       300       310       320       
pF1KB5 GLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
       :::.. :                                   
NP_004 GLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY        
      350       360       370       380          

>>NP_001488 (OMIM: 137060,607091) beta-1,4-galactosyltra  (398 aa)
 initn: 398 init1: 193 opt: 430  Z-score: 461.1  bits: 93.9 E(85289): 6e-19
Smith-Waterman score: 430; 35.1% identity (64.9% similar) in 208 aa overlap (92-294:175-378)

              70        80        90       100       110       120 
pF1KB5 RGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSR
                                     ::..:...:::.: :.:  .. ...  :.:
NP_001 FNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQR
          150       160       170       180       190       200    

             130       140       150         160       170         
pF1KB5 KKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDY--IAMHDVDLLPLNEELDYG-FP
       ... . :::.::.    :::: :.:::: :. .. ::  ... ::::.:.:..  :  : 
NP_001 QQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFS
          210       220       230       240       250       260    

      180       190       200       210       220       230        
pF1KB5 EAGPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGA
       .   . ::  ..     :  : ::.  ::::..   ::. : .:::: :::... :.   
NP_001 QPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFR
          270       280       290       300       310       320    

      240       250       260         270       280       290      
pF1KB5 GLQLFRPSGITTGYKTFRHLHDPAWRKRDQK--RIAAQKQEQFKVDREGGLNTVKYHVAS
       :... ::....   . .:: .:   .   :.  :::  :. ...     :::.. :.:  
NP_001 GMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMLS----DGLNSLTYQVLD
          330       340       350       360           370       380

        300       310       320       
pF1KB5 RTALSVGGAPCTVLNIMLDCDKTATPWCTFS
                                      
NP_001 VQRYPLYTQITVDIGTPS             
              390                     




327 residues in 1 query   sequences
60827320 residues in 85289 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 12:48:02 2016 done: Sat Nov  5 12:48:04 2016
 Total Scan time:  8.190 Total Display time:  0.010

Function used was FASTA [36.3.4 Apr, 2011]
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