Result of FASTA (ccds) for pFN21AB5440
FASTA searches a protein or DNA sequence data bank 36.3.4 Apr, 2011
Please cite:
W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448

Query: pF1KB5440, 327 aa
  1>>>pF1KB5440 327 - 327 aa - 327 aa
Library: human.CCDS.faa
  18511270 residues in 32554 sequences

Statistics:  Expectation_n fit: rho(ln(x))= 5.6729+/-0.000636; mu= 15.8750+/- 0.039
 mean_var=87.6984+/-17.248, 0's: 0 Z-trim(113.2): 11  B-trim: 0 in 0/53
 Lambda= 0.136955
 statistics sampled from 13848 (13859) to 13848 sequences
Algorithm: FASTA (3.7 Nov 2010) [optimized]
Parameters: BL50 matrix (15:-5), open/ext: -10/-2
 ktup: 2, E-join: 1 (0.774), E-opt: 0.2 (0.426), width:  16
 Scan time:  2.710

The best scores are:                                      opt bits E(32554)
CCDS4429.1 B4GALT7 gene_id:11285|Hs108|chr5        ( 327) 2315 466.6 1.2e-131
CCDS82245.1 B4GALT6 gene_id:9331|Hs108|chr18       ( 343)  433 94.7 1.1e-19
CCDS11900.1 B4GALT6 gene_id:9331|Hs108|chr18       ( 382)  433 94.7 1.2e-19
CCDS6535.1 B4GALT1 gene_id:2683|Hs108|chr9         ( 398)  430 94.2 1.9e-19
CCDS13420.1 B4GALT5 gene_id:9334|Hs108|chr20       ( 388)  426 93.4 3.2e-19
CCDS1222.1 B4GALT3 gene_id:8703|Hs108|chr1         ( 393)  405 89.2 5.8e-18
CCDS2986.1 B4GALT4 gene_id:8702|Hs108|chr3         ( 344)  396 87.4 1.8e-17
CCDS506.1 B4GALT2 gene_id:8704|Hs108|chr1          ( 372)  387 85.7 6.5e-17
CCDS55596.1 B4GALT2 gene_id:8704|Hs108|chr1        ( 401)  387 85.7 6.9e-17


>>CCDS4429.1 B4GALT7 gene_id:11285|Hs108|chr5             (327 aa)
 initn: 2315 init1: 2315 opt: 2315  Z-score: 2476.7  bits: 466.6 E(32554): 1.2e-131
Smith-Waterman score: 2315; 100.0% identity (100.0% similar) in 327 aa overlap (1-327:1-327)

               10        20        30        40        50        60
pF1KB5 MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 MFPSRRKAAQLPWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARA
               10        20        30        40        50        60

               70        80        90       100       110       120
pF1KB5 VRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLS
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 VRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLS
               70        80        90       100       110       120

              130       140       150       160       170       180
pF1KB5 RKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEA
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 RKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDYIAMHDVDLLPLNEELDYGFPEA
              130       140       150       160       170       180

              190       200       210       220       230       240
pF1KB5 GPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 GPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGL
              190       200       210       220       230       240

              250       260       270       280       290       300
pF1KB5 QLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTAL
       ::::::::::::::::::::::::::::::::::::::::::::::::::::::::::::
CCDS44 QLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTAL
              250       260       270       280       290       300

              310       320       
pF1KB5 SVGGAPCTVLNIMLDCDKTATPWCTFS
       :::::::::::::::::::::::::::
CCDS44 SVGGAPCTVLNIMLDCDKTATPWCTFS
              310       320       

>>CCDS82245.1 B4GALT6 gene_id:9331|Hs108|chr18            (343 aa)
 initn: 404 init1: 202 opt: 433  Z-score: 466.7  bits: 94.7 E(32554): 1.1e-19
Smith-Waterman score: 433; 35.0% identity (61.3% similar) in 217 aa overlap (80-292:104-316)

      50        60        70        80        90       100         
pF1KB5 QLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELL
                                     :  ::.        ..:::.:::.: :.: 
CCDS82 PYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLP
            80        90       100       110       120       130   

     110       120       130       140       150         160       
pF1KB5 VFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNST--DYIAMHDVDLL
       .:  :.  .:......  .::..:.    :::: :.:::: :. ...  : . .:::: :
CCDS82 IFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHL
           140       150       160       170       180       190   

       170       180       190         200       210       220     
pF1KB5 PLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWG
       : :..  ::  :  : : :.   . .:   :: . ::.  :. ...:  ::. : :::::
CCDS82 PENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWG
           200        210       220       230       240       250  

         230       240       250       260       270       280     
pF1KB5 REDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREG
        :::... :.. :: .. :: :    ::.. : :    .   . ..   ..:.  .:   
CCDS82 GEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYID---
            260       270       280       290       300            

         290       300       310       320       
pF1KB5 GLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
       :::.. :                                   
CCDS82 GLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY        
     310       320       330       340           

>>CCDS11900.1 B4GALT6 gene_id:9331|Hs108|chr18            (382 aa)
 initn: 404 init1: 202 opt: 433  Z-score: 466.1  bits: 94.7 E(32554): 1.2e-19
Smith-Waterman score: 433; 35.0% identity (61.3% similar) in 217 aa overlap (80-292:143-355)

      50        60        70        80        90       100         
pF1KB5 QLSCSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELL
                                     :  ::.        ..:::.:::.: :.: 
CCDS11 PYMRGFLNVNVSEVSFDEIHQLFSKDLDIEPGGHWRPKDCKPRWKVAVLIPFRNRHEHLP
            120       130       140       150       160       170  

     110       120       130       140       150         160       
pF1KB5 VFVPHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNST--DYIAMHDVDLL
       .:  :.  .:......  .::..:.    :::: :.:::: :. ...  : . .:::: :
CCDS11 IFFLHLIPMLQKQRLEFAFYVIEQTGTQPFNRAMLFNVGFKEAMKDSVWDCVIFHDVDHL
            180       190       200       210       220       230  

       170       180       190         200       210       220     
pF1KB5 PLNEELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWG
       : :..  ::  :  : : :.   . .:   :: . ::.  :. ...:  ::. : :::::
CCDS11 PENDRNYYGCGEM-PRHFAAKLDKYMYILPYKEFFGGVSGLTVEQFRKINGFPNAFWGWG
            240        250       260       270       280       290 

         230       240       250       260       270       280     
pF1KB5 REDDEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREG
        :::... :.. :: .. :: :    ::.. : :    .   . ..   ..:.  .:   
CCDS11 GEDDDLWNRVHYAGYNVTRPEGDLGKYKSIPHHHRGEVQFLGRYKLLRYSKERQYID---
             300       310       320       330       340           

         290       300       310       320       
pF1KB5 GLNTVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
       :::.. :                                   
CCDS11 GLNNLIYRPKILVDRLYTNISVNLMPELAPIEDY        
      350       360       370       380          

>>CCDS6535.1 B4GALT1 gene_id:2683|Hs108|chr9              (398 aa)
 initn: 398 init1: 193 opt: 430  Z-score: 462.6  bits: 94.2 E(32554): 1.9e-19
Smith-Waterman score: 430; 35.1% identity (64.9% similar) in 208 aa overlap (92-294:175-378)

              70        80        90       100       110       120 
pF1KB5 RGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSR
                                     ::..:...:::.: :.:  .. ...  :.:
CCDS65 FNMPVDLELVAKQNPNVKMGGRYAPRDCVSPHKVAIIIPFRNRQEHLKYWLYYLHPVLQR
          150       160       170       180       190       200    

             130       140       150         160       170         
pF1KB5 KKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDY--IAMHDVDLLPLNEELDYG-FP
       ... . :::.::.    :::: :.:::: :. .. ::  ... ::::.:.:..  :  : 
CCDS65 QQLDYGIYVINQAGDTIFNRAKLLNVGFQEALKDYDYTCFVFSDVDLIPMNDHNAYRCFS
          210       220       230       240       250       260    

      180       190       200       210       220       230        
pF1KB5 EAGPFHVASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGA
       .   . ::  ..     :  : ::.  ::::..   ::. : .:::: :::... :.   
CCDS65 QPRHISVAMDKFGFSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFR
          270       280       290       300       310       320    

      240       250       260         270       280       290      
pF1KB5 GLQLFRPSGITTGYKTFRHLHDPAWRKRDQK--RIAAQKQEQFKVDREGGLNTVKYHVAS
       :... ::....   . .:: .:   .   :.  :::  :. ...     :::.. :.:  
CCDS65 GMSISRPNAVVGRCRMIRHSRDKKNEPNPQRFDRIAHTKETMLS----DGLNSLTYQVLD
          330       340       350       360           370       380

        300       310       320       
pF1KB5 RTALSVGGAPCTVLNIMLDCDKTATPWCTFS
                                      
CCDS65 VQRYPLYTQITVDIGTPS             
              390                     

>>CCDS13420.1 B4GALT5 gene_id:9334|Hs108|chr20            (388 aa)
 initn: 402 init1: 207 opt: 426  Z-score: 458.5  bits: 93.4 E(32554): 3.2e-19
Smith-Waterman score: 426; 34.1% identity (63.1% similar) in 214 aa overlap (83-292:152-361)

             60        70        80        90       100       110  
pF1KB5 CSGDVARAVRGQGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFV
                                     ::. .      ..:.:.:::.: :.: :. 
CCDS13 KGPIDINMSEIGMDYIHELFSKDPTIKLGGHWKPSDCMPRWKVAILIPFRNRHEHLPVLF
             130       140       150       160       170       180 

            120       130       140       150         160       170
pF1KB5 PHMRRFLSRKKIRHHIYVLNQVDHFRFNRAALINVGFLESSNSTDY--IAMHDVDLLPLN
        :.  .:.:....  .::..::    :::: :.:::: :. .. :.  . .:::: .: .
CCDS13 RHLLPMLQRQRLQFAFYVVEQVGTQPFNRAMLFNVGFQEAMKDLDWDCLIFHDVDHIPES
             190       200       210       220       230       240 

              180       190         200       210       220        
pF1KB5 EELDYGFPEAGPFHVASPELHPLY--HYKTYVGGILLLSKQHYRLCNGMSNRFWGWGRED
       ..  ::  .  : : :.   . .:   :  . ::.  :. ...:  ::. : ::::: ::
CCDS13 DRNYYGCGQM-PRHFATKLDKYMYLLPYTEFFGGVSGLTVEQFRKINGFPNAFWGWGGED
             250        260       270       280       290       300

      230       240       250       260       270       280        
pF1KB5 DEFYRRIKGAGLQLFRPSGITTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLN
       :... :...:: .. :: : :  ::.. : :    .   .  .  ...:.  .:   :::
CCDS13 DDLWNRVQNAGYSVSRPEGDTGKYKSIPHHHRGEVQFLGRYALLRKSKERQGLD---GLN
              310       320       330       340       350          

      290       300       310       320       
pF1KB5 TVKYHVASRTALSVGGAPCTVLNIMLDCDKTATPWCTFS
       ...:                                   
CCDS13 NLNYFANITYDALYKNITVNLTPELAQVNEY        
       360       370       380                

>>CCDS1222.1 B4GALT3 gene_id:8703|Hs108|chr1              (393 aa)
 initn: 405 init1: 183 opt: 405  Z-score: 436.0  bits: 89.2 E(32554): 5.8e-18
Smith-Waterman score: 405; 34.0% identity (62.7% similar) in 209 aa overlap (94-297:124-329)

            70        80        90       100       110       120   
pF1KB5 QGQETSGPPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKK
                                     : :..:: : : ..: ... :.. ::.:..
CCDS12 PVPSLAEIVERNPRVEPGGRYRPAGCEPRSRTAIIVPHRAREHHLRLLLYHLHPFLQRQQ
           100       110       120       130       140       150   

           130       140       150         160       170       180 
pF1KB5 IRHHIYVLNQVDHFRFNRAALINVGFLES--SNSTDYIAMHDVDLLPLNEELDYGFPEAG
       . . :::..:. .  :::: :.:::  :.  ..  : . .::::::: :..  :     :
CCDS12 LAYGIYVIHQAGNGTFNRAKLLNVGVREALRDEEWDCLFLHDVDLLPENDHNLYVCDPRG
           160       170       180       190       200       210   

             190         200       210       220       230         
pF1KB5 PFHVASPELHPLYH--YKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAG
       : :::    .  :   :  : ::.  :. ..:   ::. :..:::: :::..  :.. ::
CCDS12 PRHVAVAMNKFGYSLPYPQYFGGVSALTPDQYLKMNGFPNEYWGWGGEDDDIATRVRLAG
           220       230       240       250       260       270   

     240       250       260        270       280       290        
pF1KB5 LQLFRPSGITTGYKTFRHLHDPAWRKRDQK-RIAAQKQEQFKVDREGGLNTVKYHVASRT
       ... ::   .  ::  .:  : . ..  ..  . .. :...  :   :.:.. :.. .: 
CCDS12 MKISRPPTSVGHYKMVKHRGDKGNEENPHRFDLLVRTQNSWTQD---GMNSLTYQLLARE
           280       290       300       310          320       330

      300       310       320                                      
pF1KB5 ALSVGGAPCTVLNIMLDCDKTATPWCTFS                               
                                                                   
CCDS12 LGPLYTNITADIGTDPRGPRAPSGPRYPPGSSQAFRQEMLQRRPPARPGPLSTANHTALR
              340       350       360       370       380       390

>>CCDS2986.1 B4GALT4 gene_id:8702|Hs108|chr3              (344 aa)
 initn: 374 init1: 187 opt: 396  Z-score: 427.2  bits: 87.4 E(32554): 1.8e-17
Smith-Waterman score: 396; 30.2% identity (61.2% similar) in 258 aa overlap (49-296:72-326)

       20        30        40        50        60        70        
pF1KB5 GLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARAVRGQGQETSGPP------
                                     ..:.   .:.  .:::..    :       
CCDS29 PKAKEFMANFHKTLILGKGKTLTNEASTKKVELDNCPSVSPYLRGQSKLIFKPDLTLEEV
              50        60        70        80        90       100 

             80        90       100       110       120       130  
pF1KB5 RACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYVLN
       .:  :.    ... .   . .:.:.::: :.: ..:. .. :.. ::.:... . :::..
CCDS29 QAENPKVSRGRYRPQECKALQRVAILVPHRNREKHLMYLLEHLHPFLQRQQLDYGIYVIH
             110       120       130       140       150       160 

            140       150         160       170       180       190
pF1KB5 QVDHFRFNRAALINVGFLES--SNSTDYIAMHDVDLLPLNEELDYGFPEAGPFHVASPEL
       :..  .:::: :.:::.::.   .. : . .:::::.: :.   :   :  : :..  . 
CCDS29 QAEGKKFNRAKLLNVGYLEALKEENWDCFIFHDVDLVPENDFNLYKCEEH-PKHLVVGRN
             170       180       190       200       210        220

                200       210       220       230       240        
pF1KB5 HPLYH--YKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRPSGI
          :.  :. : ::.  ::....   ::.:: .:::: :::..  :..   ... ::   
CCDS29 STGYRLRYSGYFGGVTALSREQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPE
              230       240       250       260       270       280

      250       260       270       280       290       300        
pF1KB5 TTGYKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTALSVGGAPCT
       .  :    : .: .  . . .:.   .: . .: :  ::.. .:...:            
CCDS29 VGKYTMVFHTRDKG-NEVNAERMKLLHQVS-RVWRTDGLSSCSYKLVSVEHNPLYINITV
              290        300        310       320       330        

      310       320       
pF1KB5 VLNIMLDCDKTATPWCTFS
                          
CCDS29 DFWFGA             
      340                 

>>CCDS506.1 B4GALT2 gene_id:8704|Hs108|chr1               (372 aa)
 initn: 364 init1: 183 opt: 387  Z-score: 417.1  bits: 85.7 E(32554): 6.5e-17
Smith-Waterman score: 389; 29.4% identity (58.8% similar) in 289 aa overlap (42-323:103-368)

              20        30        40        50        60         70
pF1KB5 PWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARAVR-GQGQETSG
                                     :. . : ....    . :. : . :   .:
CCDS50 TASSSGLPEVPSALPGPTAPTLPPCPDSPPGLVGRLLIEFTSPMPLERVQRENPGVLMGG
             80        90       100       110       120       130  

               80        90       100       110       120       130
pF1KB5 PPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYV
         :  ::.  : .           .::..:::.: ..:  .. ... .: :...:. .::
CCDS50 --RYTPPDCTPAQ----------TVAVIIPFRHREHHLRYWLHYLHPILRRQRLRYGVYV
              140                 150       160       170       180

              140       150          160       170       180       
pF1KB5 LNQVDHFRFNRAALINVGFLES---SNSTDYIAMHDVDLLPLNEELDYGFPEAGPFH--V
       .::  .  :::: :.::::::.   . . : . . ::::.:....  :   .  : :  .
CCDS50 INQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQ-PRHFAI
              190       200       210       220       230          

         190       200       210       220       230       240     
pF1KB5 ASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRP
       :  ..     :  : ::.  ::: ..   ::. :..:::: :::... ::. .:... ::
CCDS50 AMDKFGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRP
     240       250       260       270       280       290         

         250        260       270       280       290       300    
pF1KB5 SGITTG-YKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTALSVGG
       . :  : :. ..: .:    . . .:..  .. .. . :.: ...:.:.:     : :. 
CCDS50 D-IRIGRYRMIKHDRDKH-NEPNPQRFTKIQNTKLTMKRDG-IGSVRYQV-----LEVSR
     300        310        320       330        340            350 

          310       320       
pF1KB5 APCTVLNIMLDCDKTATPWCTFS
        :    :: .:  .  . :    
CCDS50 QP-LFTNITVDIGRPPS-WPPRG
              360        370  

>>CCDS55596.1 B4GALT2 gene_id:8704|Hs108|chr1             (401 aa)
 initn: 364 init1: 183 opt: 387  Z-score: 416.6  bits: 85.7 E(32554): 6.9e-17
Smith-Waterman score: 389; 29.4% identity (58.8% similar) in 289 aa overlap (42-323:132-397)

              20        30        40        50        60         70
pF1KB5 PWEDGRSGLLSGGLPRKCSVFHLFVACLSLGFFSLLWLQLSCSGDVARAVR-GQGQETSG
                                     :. . : ....    . :. : . :   .:
CCDS55 TASSSGLPEVPSALPGPTAPTLPPCPDSPPGLVGRLLIEFTSPMPLERVQRENPGVLMGG
             110       120       130       140       150       160 

               80        90       100       110       120       130
pF1KB5 PPRACPPEPPPEHWEEDASWGPHRLAVLVPFRERFEELLVFVPHMRRFLSRKKIRHHIYV
         :  ::.  : .           .::..:::.: ..:  .. ... .: :...:. .::
CCDS55 --RYTPPDCTPAQ----------TVAVIIPFRHREHHLRYWLHYLHPILRRQRLRYGVYV
               170                 180       190       200         

              140       150          160       170       180       
pF1KB5 LNQVDHFRFNRAALINVGFLES---SNSTDYIAMHDVDLLPLNEELDYGFPEAGPFH--V
       .::  .  :::: :.::::::.   . . : . . ::::.:....  :   .  : :  .
CCDS55 INQHGEDTFNRAKLLNVGFLEALKEDAAYDCFIFSDVDLVPMDDRNLYRCGDQ-PRHFAI
     210       220       230       240       250       260         

         190       200       210       220       230       240     
pF1KB5 ASPELHPLYHYKTYVGGILLLSKQHYRLCNGMSNRFWGWGREDDEFYRRIKGAGLQLFRP
       :  ..     :  : ::.  ::: ..   ::. :..:::: :::... ::. .:... ::
CCDS55 AMDKFGFRLPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRP
      270       280       290       300       310       320        

         250        260       270       280       290       300    
pF1KB5 SGITTG-YKTFRHLHDPAWRKRDQKRIAAQKQEQFKVDREGGLNTVKYHVASRTALSVGG
       . :  : :. ..: .:    . . .:..  .. .. . :.: ...:.:.:     : :. 
CCDS55 D-IRIGRYRMIKHDRDKH-NEPNPQRFTKIQNTKLTMKRDG-IGSVRYQV-----LEVSR
       330       340        350       360        370            380

          310       320       
pF1KB5 APCTVLNIMLDCDKTATPWCTFS
        :    :: .:  .  . :    
CCDS55 QP-LFTNITVDIGRPPS-WPPRG
               390        400 




327 residues in 1 query   sequences
18511270 residues in 32554 library sequences
 Tcomplib [36.3.4 Apr, 2011] (8 proc)
 start: Sat Nov  5 12:48:02 2016 done: Sat Nov  5 12:48:02 2016
 Total Scan time:  2.710 Total Display time:  0.020

Function used was FASTA [36.3.4 Apr, 2011]
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