Restriction map for pFN21AA0672
 (Linear) (Six-base) MAPSORT of: KIAA0672.seq  Check: 267  from: 1  to: 2454



KIAA0672.orf

 With 182 enzymes: SgfI * 

                        October 24, 2006 15:07  ..

AccI GT'mk_AC

Cuts at:      0    2311    2362    2454 
   Size:       2311      51      92

  Fragments arranged by size: 

                2311      92      51
 
AcuI CTGAAGnnnnnnnnnnnnnn_nn'

Cuts at:      0      73     470     916    1063    2454 
   Size:         73     397     446     147    1391

  Fragments arranged by size: 

                1391     446     397     147      73
 
AfeI AGC'GCT

Cuts at:      0     193    2454 
   Size:        193    2261
 
AflIII A'CryG_T

Cuts at:      0    1383    2454 
   Size:       1383    1071
 
AloI GAACnnnnnnTCCnnnnnnn_nnnnn'

Cuts at:      0    1295    1327    1333    1365    2454 
   Size:       1295      32       6      32    1089

  Fragments arranged by size: 

                1295    1089      32      32       6
 
AlwNI CAG_nnn'CTG

Cuts at:      0     184     231     324    1692    1795    2410    2454 
   Size:        184      47      93    1368     103     615      44

  Fragments arranged by size: 

                1368     615     184     103      93      47      44
 
ApaI G_GGCC'C

Cuts at:      0    1751    2454 
   Size:       1751     703
 
ApoI r'AATT_y

Cuts at:      0    1147    2454 
   Size:       1147    1307
 
AvaI C'yCGr_G

Cuts at:      0    1453    1750    2103    2356    2454 
   Size:       1453     297     353     253      98

  Fragments arranged by size: 

                1453     353     297     253      98
 
BamHI G'GATC_C

Cuts at:      0    1040    2454 
   Size:       1040    1414
 
BanI G'GyrC_C

Cuts at:      0     517    1445    1879    1953    2454 
   Size:        517     928     434      74     501

  Fragments arranged by size: 

                 928     517     501     434      74
 
BanII G_rGCy'C

Cuts at:      0     368    1751    1860    1872    2357    2454 
   Size:        368    1383     109      12     485      97

  Fragments arranged by size: 

                1383     485     368     109      97      12
 
BbeI G_GCGC'C

Cuts at:      0    1449    1883    2454 
   Size:       1449     434     571

  Fragments arranged by size: 

                1449     571     434
 
BbsI GAAGACnn'nnnn_

Cuts at:      0      86     476    2454 
   Size:         86     390    1978

  Fragments arranged by size: 

                1978     390      86
 
BbvCI CC'TCA_GC

Cuts at:      0    1474    2222    2454 
   Size:       1474     748     232

  Fragments arranged by size: 

                1474     748     232
 
BcgI CGAnnnnnnTGCnnnnnnnnnn_nn'

Cuts at:      0      32    1639    1673    2454 
   Size:         32    1607      34     781

  Fragments arranged by size: 

                1607     781      34      32
 
BglI GCCn_nnn'nGGC

Cuts at:      0    1654    2454 
   Size:       1654     800
 
BglII A'GATC_T

Cuts at:      0    2316    2454 
   Size:       2316     138
 
BlpI GC'TnA_GC

Cuts at:      0    1871    2454 
   Size:       1871     583
 
Bme1580I G_kGCm'C

Cuts at:      0    1751    1831    2454 
   Size:       1751      80     623

  Fragments arranged by size: 

                1751     623      80
 
BmgBI CAC'GTC

Cuts at:      0     357    2454 
   Size:        357    2097
 
BmrI ACTGGGnnnn_n'

Cuts at:      0    1190    1578    2020    2454 
   Size:       1190     388     442     434

  Fragments arranged by size: 

                1190     442     434     388
 
BplI GAGnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:      0    2099    2225    2454 
   Size:       2099     126     229

  Fragments arranged by size: 

                2099     229     126
 
BpmI CTGGAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     127     790    1522    1723    1772    1803    1886    2404 
   Size:        127     663     732     201      49      31      83     518

Cuts at:   2404    2454 
   Size:         50

  Fragments arranged by size: 

                 732     663     518     201     127      83      50      49
                  31
 
Bpu10I CC'TnA_GC

Cuts at:      0     317    1474    2189    2222    2454 
   Size:        317    1157     715      33     232

  Fragments arranged by size: 

                1157     715     317     232      33
 
BpuEI CTTGAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     859    2454 
   Size:        859    1595
 
BsaI GGTCTCn'nnnn_

Cuts at:      0    2196    2454 
   Size:       2196     258
 
BsaAI yAC'GTr

Cuts at:      0    1386    2454 
   Size:       1386    1068
 
BsaHI Gr'CG_yC

Cuts at:      0    1446    1880    2454 
   Size:       1446     434     574

  Fragments arranged by size: 

                1446     574     434
 
BsaWI w'CCGG_w

Cuts at:      0    1931    2454 
   Size:       1931     523
 
BsaXI ACnnnnnCTCCnnnnnnn_nnn'

Cuts at:      0     178     208    1211    1241    1333    1363    2419    2449 
   Size:        178      30    1003      30      92      30    1056      30

Cuts at:   2449    2454 
   Size:          5

  Fragments arranged by size: 

                1056    1003     178      92      30      30      30      30
                   5
 
BseRI GAGGAGnnnnnnnn_nn'

Cuts at:      0     787     871    1578    2120    2210    2443    2446    2454 
   Size:        787      84     707     542      90     233       3       8

  Fragments arranged by size: 

                 787     707     542     233      90      84       8       3
            
 
BseYI C'CCAG_C

Cuts at:      0    1888    1894    2050    2118    2454 
   Size:       1888       6     156      68     336

  Fragments arranged by size: 

                1888     336     156      68       6
 
BsgI GTGCAGnnnnnnnnnnnnnn_nn'

Cuts at:      0     958    1781    1859    2454 
   Size:        958     823      78     595

  Fragments arranged by size: 

                 958     823     595      78
 
BsiEI CG_ry'CG

Cuts at:      0     795    1595    1599    2454 
   Size:        795     800       4     855

  Fragments arranged by size: 

                 855     800     795       4
 
BsiHKAI G_wGCw'C

Cuts at:      0     779    1872    2357    2390    2446    2454 
   Size:        779    1093     485      33      56       8

  Fragments arranged by size: 

                1093     779     485      56      33       8
 
BsmI GAATG_Cn'

Cuts at:      0    1098    2454 
   Size:       1098    1356
 
BsmBI CGTCTCn'nnnn_

Cuts at:      0     292     347    2454 
   Size:        292      55    2107

  Fragments arranged by size: 

                2107     292      55
 
Bsp1286I G_dGCh'C

Cuts at:      0     368     779    1751    1831    1860    1872    2357    2390 
   Size:        368     411     972      80      29      12     485      33

Cuts at:   2390    2446    2454 
   Size:         56       8

  Fragments arranged by size: 

                 972     485     411     368      80      56      33      29
                  12       8
 
BspEI T'CCGG_A

Cuts at:      0    1931    2454 
   Size:       1931     523
 
BsrFI r'CCGG_y

Cuts at:      0    1442    1466    1594    2454 
   Size:       1442      24     128     860

  Fragments arranged by size: 

                1442     860     128      24
 
BsrGI T'GTAC_A

Cuts at:      0     602    2454 
   Size:        602    1852
 
BstXI CCAn_nnnn'nTGG

Cuts at:      0     567    1203    2011    2454 
   Size:        567     636     808     443

  Fragments arranged by size: 

                 808     636     567     443
 
BstYI r'GATC_y

Cuts at:      0    1040    2316    2454 
   Size:       1040    1276     138

  Fragments arranged by size: 

                1276    1040     138
 
Bsu36I CC'TnA_GG

Cuts at:      0     535    1525    2084    2454 
   Size:        535     990     559     370

  Fragments arranged by size: 

                 990     559     535     370
 
BtgI C'CryG_G

Cuts at:      0    1484    1703    2264    2454 
   Size:       1484     219     561     190

  Fragments arranged by size: 

                1484     561     219     190
 
CspCI CAAnnnnnGTGGnnnnnnnnnn_nn'

Cuts at:      0    1553    1588    2454 
   Size:       1553      35     866

  Fragments arranged by size: 

                1553     866      35
 
DrdI GACnn_nn'nnGTC

Cuts at:      0     480    1275    2454 
   Size:        480     795    1179

  Fragments arranged by size: 

                1179     795     480
 
EaeI y'GGCC_r

Cuts at:      0      32     614     792    1234    1592    1980    2013    2454 
   Size:         32     582     178     442     358     388      33     441

  Fragments arranged by size: 

                 582     442     441     388     358     178      33      32
            
 
EagI C'GGCC_G

Cuts at:      0     792    1592    2454 
   Size:        792     800     862

  Fragments arranged by size: 

                 862     800     792
 
EarI CTCTTCn'nnn_

Cuts at:      0     545     871    1575    2454 
   Size:        545     326     704     879

  Fragments arranged by size: 

                 879     704     545     326
 
EciI GGCGGAnnnnnnnnn_nn'

Cuts at:      0     397    2359    2454 
   Size:        397    1962      95

  Fragments arranged by size: 

                1962     397      95
 
EcoICRI GAG'CTC

Cuts at:      0    1870    2355    2454 
   Size:       1870     485      99

  Fragments arranged by size: 

                1870     485      99
 
Eco57MI CTGrAGnnnnnnnnnnnnnn_nn'

Cuts at:      0      73     127     470     790     916    1063    1522    1723 
   Size:         73      54     343     320     126     147     459     201

Cuts at:   1723    1772    1803    1886    2404    2454 
   Size:         49      31      83     518      50

  Fragments arranged by size: 

                 518     459     343     320     201     147     126      83
                  73      54      50      49      31
 
EcoNI CCTnn'n_nnAGG

Cuts at:      0      88    2454 
   Size:         88    2366
 
EcoO109I rG'GnC_Cy

Cuts at:      0    1219    1971    2271    2454 
   Size:       1219     752     300     183

  Fragments arranged by size: 

                1219     752     300     183
 
FalI AAGnnnnnCTTnnnnnnnn_nnnnn'

Cuts at:      0     103     771    1992    2454 
   Size:        103     668    1221     462

  Fragments arranged by size: 

                1221     668     462     103
 
HaeII r_GCGC'y

Cuts at:      0     195    1449    1883    2454 
   Size:        195    1254     434     571

  Fragments arranged by size: 

                1254     571     434     195
 
Hin4I GAynnnnnvTCnnnnnnnn_nnnnn'

Cuts at:      0     178     210     574     606    1211    1243    2275    2307 
   Size:        178      32     364      32     605      32    1032      32

Cuts at:   2307    2323    2344    2355    2376    2419    2451    2454 
   Size:         16      21      11      21      43      32       3

  Fragments arranged by size: 

                1032     605     364     178      43      32      32      32
                  32      32      21      21      16      11       3
 
HincII GTy'rAC

Cuts at:      0    2363    2454 
   Size:       2363      91
 
HindIII A'AGCT_T

Cuts at:      0    1075    2454 
   Size:       1075    1379
 
KasI G'GCGC_C

Cuts at:      0    1445    1879    2454 
   Size:       1445     434     575

  Fragments arranged by size: 

                1445     575     434
 
MfeI C'AATT_G

Cuts at:      0     965    1208    2454 
   Size:        965     243    1246

  Fragments arranged by size: 

                1246     965     243
 
MmeI TCCrACnnnnnnnnnnnnnnnnnn_nn'

Cuts at:      0    1579    2454 
   Size:       1579     875
 
MscI TGG'CCA

Cuts at:      0      34     616    1236    1982    2015    2454 
   Size:         34     582     620     746      33     439

  Fragments arranged by size: 

                 746     620     582     439      34      33
 
MslI CAynn'nnrTG

Cuts at:      0    1546    2454 
   Size:       1546     908
 
MspA1I CmG'CkG

Cuts at:      0      30     595     768     791    1677    1705    2011    2019 
   Size:         30     565     173      23     886      28     306       8

Cuts at:   2019    2122    2454 
   Size:        103     332

  Fragments arranged by size: 

                 886     565     332     306     173     103      30      28
                  23       8
 
NaeI GCC'GGC

Cuts at:      0    1468    2454 
   Size:       1468     986
 
NarI GG'CG_CC

Cuts at:      0    1446    1880    2454 
   Size:       1446     434     574

  Fragments arranged by size: 

                1446     574     434
 
NgoMIV G'CCGG_C

Cuts at:      0    1466    2454 
   Size:       1466     988
 
NspI r_CATG'y

Cuts at:      0      24     158    1321    2292    2310    2394    2454 
   Size:         24     134    1163     971      18      84      60

  Fragments arranged by size: 

                1163     971     134      84      60      24      18
 
PasI CC'CwG_GG

Cuts at:      0    1336    2296    2454 
   Size:       1336     960     158

  Fragments arranged by size: 

                1336     960     158
 
PflMI CCAn_nnn'nTGG

Cuts at:      0      45    1542    2454 
   Size:         45    1497     912

  Fragments arranged by size: 

                1497     912      45
 
PfoI T'CCnGG_A

Cuts at:      0    1058    2454 
   Size:       1058    1396
 
PmlI CAC'GTG

Cuts at:      0    1386    2454 
   Size:       1386    1068
 
PpiI GAACnnnnnCTCnnnnnnnn_nnnnn'

Cuts at:      0    1333    1365    2454 
   Size:       1333      32    1089

  Fragments arranged by size: 

                1333    1089      32
 
PpuMI rG'GwC_Cy

Cuts at:      0    1219    1971    2454 
   Size:       1219     752     483

  Fragments arranged by size: 

                1219     752     483
 
PshAI GACnn'nnGTC

Cuts at:      0    1916    2454 
   Size:       1916     538
 
PspOMI G'GGCC_C

Cuts at:      0    1747    2454 
   Size:       1747     707
 
PstI C_TGCA'G

Cuts at:      0     164    1911    2127    2454 
   Size:        164    1747     216     327

  Fragments arranged by size: 

                1747     327     216     164
 
PvuII CAG'CTG

Cuts at:      0      30     595    2019    2122    2454 
   Size:         30     565    1424     103     332

  Fragments arranged by size: 

                1424     565     332     103      30
 
SacI G_AGCT'C

Cuts at:      0    1872    2357    2454 
   Size:       1872     485      97

  Fragments arranged by size: 

                1872     485      97
 
SacII CC_GC'GG

Cuts at:      0    1706    2454 
   Size:       1706     748
 
SalI G'TCGA_C

Cuts at:      0    2361    2454 
   Size:       2361      93
 
ScaI AGT'ACT

Cuts at:      0     946    2454 
   Size:        946    1508
 
SexAI A'CCwGG_T

Cuts at:      0     460    2454 
   Size:        460    1994
 
SfcI C'TryA_G

Cuts at:      0     160    1404    1907    2123    2312    2454 
   Size:        160    1244     503     216     189     142

  Fragments arranged by size: 

                1244     503     216     189     160     142
 
SfoI GGC'GCC

Cuts at:      0    1447    1881    2454 
   Size:       1447     434     573

  Fragments arranged by size: 

                1447     573     434
 
SmlI C'TyrA_G

Cuts at:      0     838    2454 
   Size:        838    1616
 
SphI G_CATG'C

Cuts at:      0      24    1321    2454 
   Size:         24    1297    1133

  Fragments arranged by size: 

                1297    1133      24
 
SspI AAT'ATT

Cuts at:      0     402    2454 
   Size:        402    2052
 
StuI AGG'CCT

Cuts at:      0     736    2454 
   Size:        736    1718
 
StyI C'CwwG_G

Cuts at:      0     521    1112    1967    2096    2454 
   Size:        521     591     855     129     358

  Fragments arranged by size: 

                 855     591     521     358     129
 
TaqII GACCGAnnnnnnnnn_nn'

Cuts at:      0    1534    1560    1980    2454 
   Size:       1534      26     420     474

  Fragments arranged by size: 

                1534     474     420      26
 
TatI w'GTAC_w

Cuts at:      0     602     944    1380    2454 
   Size:        602     342     436    1074

  Fragments arranged by size: 

                1074     602     436     342
 
TstI CACnnnnnnTCCnnnnnnn_nnnnn'

Cuts at:      0     667     699    1083    1115    1955    1987    2454 
   Size:        667      32     384      32     840      32     467

  Fragments arranged by size: 

                 840     667     467     384      32      32      32
 
XcmI CCAnnnn_n'nnnnTGG

Cuts at:      0      42     435    2454 
   Size:         42     393    2019

  Fragments arranged by size: 

                2019     393      42
 
XmnI GAAnn'nnTTC

Cuts at:      0      10      83    2454 
   Size:         10      73    2371

  Fragments arranged by size: 

                2371      73      10
 

 Enzymes that do cut:

     AccI     AcuI     AfeI   AflIII     AloI    AlwNI     ApaI     ApoI
     AvaI    BamHI     BanI    BanII     BbeI     BbsI    BbvCI     BcgI
     BglI    BglII     BlpI Bme1580I    BmgBI     BmrI     BplI     BpmI
   Bpu10I    BpuEI     BsaI    BsaAI    BsaHI    BsaWI    BsaXI    BseRI
    BseYI     BsgI    BsiEI  BsiHKAI     BsmI    BsmBI Bsp1286I    BspEI
    BsrFI    BsrGI    BstXI    BstYI   Bsu36I     BtgI    CspCI     DrdI
     EaeI     EagI     EarI     EciI  EcoICRI  Eco57MI    EcoNI EcoO109I
     FalI    HaeII    Hin4I   HincII  HindIII     KasI     MfeI     MmeI
     MscI     MslI   MspA1I     NaeI     NarI   NgoMIV     NspI     PasI
    PflMI     PfoI     PmlI     PpiI    PpuMI    PshAI   PspOMI     PstI
    PvuII     SacI    SacII     SalI     ScaI    SexAI     SfcI     SfoI
     SmlI     SphI     SspI     StuI     StyI    TaqII     TatI     TstI
     XcmI     XmnI

 Enzymes that do not cut: 

     AarI    AatII   Acc65I     AclI    AflII     AgeI     AhdI     AleI
     AlfI    ApaLI     AscI     AseI    AsiSI    AvrII     BaeI    BciVI
     BclI    BfrBI     BmtI    BsaBI    BsiWI    BspHI    BspMI    BsrBI
    BsrDI   BssHII    BssSI   BstAPI    BstBI   BstEII  BstZ17I    BtgZI
     BtsI     ClaI     DraI   DraIII    EcoRI    EcoRV     FseI     FspI
    FspAI     HpaI     KpnI     MluI     NcoI     NdeI     NheI     NotI
     NruI     NsiI     PacI     PciI     PmeI     PsiI    PspXI     PsrI
     PvuI    RsrII    SanDI     SapI     SbfI     SfiI     SgfI    SgrAI
     SmaI    SnaBI     SpeI     SrfI     SwaI  Tth111I     XbaI     XhoI
     XmaI     ZraI
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