ARHGEF9 ORF clone FXC00073

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Flexi ORF Clone FXC00073

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Clone info.

Species

human

Clone Name

pF1KA0424 Sequence (with vector) Restriction Map

Product ID

FXC00073

HaloTag Clone PID

FHC00073

ORF Sequence

DNA sequence (1548 bp)
Protein sequence (516 aa)

Linker Type

Flexi type

more Linker info

Vector Type

pF1K Vector sequence

Restriction Map

Cloning Site

SgfI-PmeI

GenBank Accession

ORF sequence is derived from [AB385332]

Gene

KIAA0424

Symbol

ARHGEF9

Alias : COLLYBISTIN, DEE8, EIEE8, HPEM-2, PEM-2, PEM2

Description

Cdc42 guanine nucleotide exchange factor (GEF) 9, transcript variant 1

Original Clone ID

hh01267

Features of the cloned ORF sequence

Description

Length: 1548 bp
Restriction map A Restriction map B
Genomic Structure

Features of the protein sequence

Description

Length: 516 aa
Result of homology search against CCDS protein database ( FASTA output, Multiple alignment) Entry Exp ID% symbol CCDS35315.1 5.5e-152 100.0 ARHGEF9 CCDS83477.1 3.6e-146 100.0 ARHGEF9 CCDS55430.1 8.2e-133 98.5 ARHGEF9 CCDS55429.1 5.9e-120 100.0 ARHGEF9 CCDS66517.1 5.8e-90 61.5 SPATA13 The numbers on the left and right sides of a black line in the graphical overview indicate the lengths (in amino acid residues) of the non-homologous N-terminal and C-terminal portions flanking the homologous region (indicated by the black line), respectively.
Result of motif / domain search (InterProScan and SOSUI) [ zoom out (x2) ]
Result of InterProScan Search method interpro_ID From To Entry Definition HMMPfam IPR011511 23 63 PF07653 Variant SH3 IPR000219 107 286 PF00621 Dbl homology (DH) domain IPR001849 334 422 PF00169 Pleckstrin homology domain HMMSmart IPR001452 11 66 SM00326 Src homology-3 domain IPR000219 107 286 SM00325 Dbl homology (DH) domain IPR001849 319 427 SM00233 Pleckstrin homology domain ProfileScan IPR001452 8 67 PS50002 Src homology-3 domain IPR000219 103 287 PS50010 Dbl homology (DH) domain IPR001849 318 425 PS50003 Pleckstrin homology domain
Result of homology search against disease genes in OMIM database(FASTA output, Multiple alignment) H_id H_len (aa) OMIM_No. ID (%) Q_ali/Q_len (%) NP_056000 516 300429,300607 100.0 100.0 XP_016884855 516 300429,300607 100.0 100.0 XP_005262306 523 300429,300607 99.8 99.6 XP_011529192 516 300429,300607 99.6 100.0 XP_016884854 516 300429,300607 99.6 100.0 Inquiries or Suggestions ? Send a message to flexiclone AT kazusagt.com

ORF DNA

Cloned ORF Nucleotide sequence for pF1KA0424 Download

>KIAA0424  1548 bp
ATGACGTTGCTGATCACTGGAGATTCCATCGTTAGTGCTGAGGCAGTATGGGATCACGTC
ACCATGGCCAACCGGGAGTTGGCATTTAAAGCTGGCGACGTCATCAAAGTCTTGGATGCT
TCCAACAAGGATTGGTGGTGGGGCCAGATCGACGATGAGGAGGGATGGTTTCCTGCCAGC
TTTGTGAGGCTCTGGGTGAACCAGGAGGATGAGGTGGAGGAGGGGCCCAGCGATGTGCAG
AACGGACACCTGGACCCCAATTCAGACTGCCTCTGTCTGGGGCGGCCACTACAGAACCGG
GACCAGATGCGGGCCAATGTCATCAATGAGATAATGAGCACTGAGCGTCACTACATCAAG
CACCTCAAGGATATTTGTGAGGGCTATCTGAAGCAGTGCCGGAAGAGAAGGGACATGTTC
AGTGACGAGCAACTGAAGGTAATCTTTGGGAACATTGAAGATATCTACAGATTTCAGATG
GGCTTTGTGAGAGACCTGGAGAAACAGTATAACAATGATGACCCCCACCTCAGCGAGATA
GGACCCTGCTTCCTAGAGCACCAAGATGGATTCTGGATATACTCTGAGTATTGTAACAAC
CACCTGGATGCTTGCATGGAGCTCTCCAAACTGATGAAGGACAGCCGCTACCAGCACTTC
TTTGAGGCCTGTCGCCTCTTGCAGCAGATGATTGACATTGCTATCGATGGTTTCCTTTTG
ACTCCAGTGCAGAAGATCTGCAAGTATCCCTTACAGTTGGCTGAGCTCCTAAAGTATACT
GCCCAAGACCACAGTGACTACAGGTATGTGGCAGCTGCTTTGGCTGTCATGAGAAATGTG
ACTCAGCAGATCAACGAACGCAAGCGACGTTTAGAGAATATTGACAAGATTGCTCAGTGG
CAGGCTTCTGTCCTAGACTGGGAGGGCGAGGACATCCTAGACAGGAGCTCGGAGCTGATC
TACACTGGGGAGATGGCCTGGATCTACCAGCCCTACGGCCGCAACCAGCAGCGGGTCTTC
TTCCTGTTTGACCACCAGATGGTCCTCTGCAAGAAGGACCTAATCCGGAGAGACATCCTG
TACTACAAAGGCCGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGA
GATGATGACTTCAATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAG
GAGATACATCTGTTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTC
AGAGAAGAGAGGAAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAAC
CAGAAGAGGCAGGCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCT
GCCCGCTCAGTTCCTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTAC
CTGGTCCCCGACGGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGC
CAGTCACCATTCTGGCAAAACTTCAGCAGGTTAACCCCCTTCAAAAAA

ORF Protein

Cloned ORF protein sequence for pF1KA0424 Download

>KIAA0424  516 aa
MTLLITGDSIVSAEAVWDHVTMANRELAFKAGDVIKVLDASNKDWWWGQIDDEEGWFPAS
FVRLWVNQEDEVEEGPSDVQNGHLDPNSDCLCLGRPLQNRDQMRANVINEIMSTERHYIK
HLKDICEGYLKQCRKRRDMFSDEQLKVIFGNIEDIYRFQMGFVRDLEKQYNNDDPHLSEI
GPCFLEHQDGFWIYSEYCNNHLDACMELSKLMKDSRYQHFFEACRLLQQMIDIAIDGFLL
TPVQKICKYPLQLAELLKYTAQDHSDYRYVAAALAVMRNVTQQINERKRRLENIDKIAQW
QASVLDWEGEDILDRSSELIYTGEMAWIYQPYGRNQQRVFFLFDHQMVLCKKDLIRRDIL
YYKGRIDMDKYEVVDIEDGRDDDFNVSMKNAFKLHNKETEEIHLFFAKKLEEKIRWLRAF
REERKMVQEDEKIGFEISENQKRQAAMTVRKVPKQKGVNSARSVPPSYPPPQDPLNHGQY
LVPDGIAQSQVFEFTEPKRSQSPFWQNFSRLTPFKK

ORF+Vector

Nucleotide Sequence (with vector) for pF1KA0424 Download

>pF1KA0424  4661 bp
GGATCTCGATCCCGCGAAATTAATACGACTCACTATAGGGGAATTGTGAGCGGATAACAA
TTCCCCACTAGTAATAATTTTCTTTAACTTTAGTAAGGAGCGATCGCCATGACGTTGCTG
ATCACTGGAGATTCCATCGTTAGTGCTGAGGCAGTATGGGATCACGTCACCATGGCCAAC
CGGGAGTTGGCATTTAAAGCTGGCGACGTCATCAAAGTCTTGGATGCTTCCAACAAGGAT
TGGTGGTGGGGCCAGATCGACGATGAGGAGGGATGGTTTCCTGCCAGCTTTGTGAGGCTC
TGGGTGAACCAGGAGGATGAGGTGGAGGAGGGGCCCAGCGATGTGCAGAACGGACACCTG
GACCCCAATTCAGACTGCCTCTGTCTGGGGCGGCCACTACAGAACCGGGACCAGATGCGG
GCCAATGTCATCAATGAGATAATGAGCACTGAGCGTCACTACATCAAGCACCTCAAGGAT
ATTTGTGAGGGCTATCTGAAGCAGTGCCGGAAGAGAAGGGACATGTTCAGTGACGAGCAA
CTGAAGGTAATCTTTGGGAACATTGAAGATATCTACAGATTTCAGATGGGCTTTGTGAGA
GACCTGGAGAAACAGTATAACAATGATGACCCCCACCTCAGCGAGATAGGACCCTGCTTC
CTAGAGCACCAAGATGGATTCTGGATATACTCTGAGTATTGTAACAACCACCTGGATGCT
TGCATGGAGCTCTCCAAACTGATGAAGGACAGCCGCTACCAGCACTTCTTTGAGGCCTGT
CGCCTCTTGCAGCAGATGATTGACATTGCTATCGATGGTTTCCTTTTGACTCCAGTGCAG
AAGATCTGCAAGTATCCCTTACAGTTGGCTGAGCTCCTAAAGTATACTGCCCAAGACCAC
AGTGACTACAGGTATGTGGCAGCTGCTTTGGCTGTCATGAGAAATGTGACTCAGCAGATC
AACGAACGCAAGCGACGTTTAGAGAATATTGACAAGATTGCTCAGTGGCAGGCTTCTGTC
CTAGACTGGGAGGGCGAGGACATCCTAGACAGGAGCTCGGAGCTGATCTACACTGGGGAG
ATGGCCTGGATCTACCAGCCCTACGGCCGCAACCAGCAGCGGGTCTTCTTCCTGTTTGAC
CACCAGATGGTCCTCTGCAAGAAGGACCTAATCCGGAGAGACATCCTGTACTACAAAGGC
CGCATTGACATGGATAAATATGAGGTAGTTGACATTGAGGATGGCAGAGATGATGACTTC
AATGTCAGCATGAAGAATGCCTTTAAGCTTCACAACAAGGAGACTGAGGAGATACATCTG
TTCTTTGCCAAGAAGCTGGAGGAAAAAATACGCTGGCTCAGGGCTTTCAGAGAAGAGAGG
AAAATGGTACAGGAAGATGAAAAAATTGGCTTTGAAATTTCTGAAAACCAGAAGAGGCAG
GCTGCAATGACTGTGAGAAAAGTCCCTAAGCAAAAAGGTGTCAACTCTGCCCGCTCAGTT
CCTCCTTCCTACCCACCACCGCAGGACCCGTTAAACCACGGCCAGTACCTGGTCCCCGAC
GGCATCGCTCAGTCGCAGGTCTTTGAGTTCACCGAACCCAAGCGCAGCCAGTCACCATTC
TGGCAAAACTTCAGCAGGTTAACCCCCTTCAAAAAAGTTTAAACGAATTCGAGCTCGGTA
CCCGGGGATCCTCTAGAGTCGACCTGCAGGCATGCAAGCTGATCCGGCTGCTAACAAAGC
CCGAAAGGAAGCTGAGTTGGCTGCTGCCACCGCTGAGCAATAACTAGCATAACCCCTTGG
GGCCTCTAAACGGGTCTTGAGGGGTTTTTTGCTGAAAGGAGGAACTATATCCGGTTCGCT
TGCTGTCCATAAAACCGCCCAGTCTAGCTATCGCCATGTAAGCCCACTGCAAGCTACCTG
CTTTCTCTTTGCGCTTGCGTTTTCCCTTGTCCAGATAGCCCAGTAGCTGACATTCATCCG
GGGTCAGCACCGTTTCTGCGGACTGGCTTTCTACGTGTTCCGCTTCCTTTAGCAGCCCTT
GCGCCCTGAGTGCTTGCGGCAGCGTGAGCTTCAAAAGAATTGCCAGCTGGGGCGCCCTCT
GGTAAGGTTGGGAAGCCCTGCAAAGTAAACTGGATGGCTTTCTTGCCGCCAAGGATCTGA
TGGCGCAGGGGATCAAGATCTGATCAAGAGACAGGATGACGGTCGTTTCGCATGCTTGAA
CAAGATGGATTGCACGCAGGTTCTCCGGCCGCTTGGGTGGAGAGGCTATTCGGCTATGAC
TGGGCACAACAGACAATCGGCTGCTCTGATGCCGCCGTGTTCCGGCTGTCAGCGCAGGGG
CGCCCGGTTCTTTTTGTCAAGACCGACCTGTCCGGTGCCCTGAATGAACTGCAGGACGAG
GCAGCGCGGCTATCGTGGCTGGCCACGACGGGCGTTCCTTGCGCAGCTGTGCTCGACGTT
GTCACTGAAGCGGGAAGGGACTGGCTGCTATTGGGCGAAGTGCCGGGGCAGGATCTCCTG
TCATCTCACCTTGCTCCTGCCGAGAAAGTATCCATCATGGCTGATGCAATGCGGCGGCTG
CATACGCTTGATCCGGCTACCTGCCCATTCGACCACCAAGCGAAACATCGCATCGAGCGA
GCACGCACTCGGATGGAAGCCGGTCTTGTCGATCAGGATGATCTGGACGAAGAGCATCAG
GGGCTCGCGCCAGCCGAACTGTTCGCCAGGCTCAAGGCGCGTATGCCGGATGGTGAGGAT
CTCGTCGTGACTCATGGCGATGCCTGCTTGCCGAATATCATGGTGGAAAATGGCCGCTTT
TCTGGATTCATCGACTGTGGCCGGCTGGGTGTGGCGGACCGCTATCAGGACATAGCGTTG
GCTACCCGTGATATTGCTGAAGAGCTTGGCGGCGAATGGGCTGACCGCTTCCTCGTGCTT
TACGGTATCGCCGCTCCCGATTCGCAGCGCATCGCCTTCTATCGCCTTCTTGACGAGTTC
TTCTGAGCGGGACTCTGGGGTTCGAAATGACCGACCAAGCGACGCCCAACCGGTATCAGC
TCACTCAAAGGCGGTAATACGGTTATCCACAGAATCAGGGGATAACGCAGGAAAGAACAT
GTGAGCAAAAGGCCAGCAAAAGGCCAGGAACCGTAAAAAGGCCGCGTTGCTGGCGTTTTT
CCATAGGCTCCGCCCCCCTGACGAGCATCACAAAAATCGACGCTCAAGTCAGAGGTGGCG
AAACCCGACAGGACTATAAAGATACCAGGCGTTTCCCCCTGGAAGCTCCCTCGTGCGCTC
TCCTGTTCCGACCCTGCCGCTTACCGGATACCTGTCCGCCTTTCTCCCTTCGGGAAGCGT
GGCGCTTTCTCATAGCTCACGCTGTAGGTATCTCAGTTCGGTGTAGGTCGTTCGCTCCAA
GCTGGGCTGTGTGCACGAACCCCCCGTTCAGCCCGACCGCTGCGCCTTATCCGGTAACTA
TCGTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACTGGCAGCAGCCACTGGTAA
CAGGATTAGCAGAGCGAGGTATGTAGGCGGTGCTACAGAGTTCTTGAAGTGGTGGCCTAA
CTACGGCTACACTAGAAGGACAGTATTTGGTATCTGCGCTCTGCTGAAGCCAGTTACCTT
CGGAAAAAGAGTTGGTAGCTCTTGATCCGGCAAACAAACCACCGCTGGTAGCGGTGGTTT
TTTTGTTTGCAAGCAGCAGATTACGCGCAGAAAAAAAGGATTTCAAGAAGATCCTTTGAT
CTTTTCTACGGGGTCTGACGCTCAGTGGAACGAAAACTCACGTTAAGGGATTTTGGTCAT
GAGATTATCAAAAAGGATCTTCACCTAGATCCTTTTATAGTCCGGAAATACAGGAACGCA
CGCTGGATGGCCCTTCGCTGGGATGGTGAAACCATGAAAAATGGCAGCTTCAGTGGATTA
AGTGGGGGTAATGTGGCCTGTACCCTCTGGTTGCATAGGTATTCATACGGTTAAAATTTA
TCAGGCGCGATTGCGGCAGTTTTTCGGGTGGTTTGTTGCCATTTTTACCTGTCTGCTGCC
GTGATCGCGCTGAACGCGTTTTAGCGGTGCGTACAATTAAGGGATTATGGTAAATCCACT
TACTGTCTGCCCTCGTAGCCATCGAGATAAACCGCAGTACTCCGGCCACGATGCGTCCGG
CGTAGAGGATCGAGATCTTTTCAGCCTGATACAGATTAAATCAGAACGCAGAAGCGGTCT
GATAAAACAGAATTTGCCTGGCGGCAGTAGCGCGGTGGTCCCACCTGACCCCATGCCGAA
CTCAGAAGTGAAACGCCGTAGCGCCGATGGTAGTGTGGGGTCTCCCCATGCGAGAGTAGG
GAACTGCCAGGCATCAAATAAAACGAAAGGCTCAGTCGAAAGACTGGGCCTTTCGTTTTA
TCTGTTGTTTGTCGGTGAACGCTCTCCTGAGTAGGACAAATCCGCCGGGAGCGGATTTGA
ACGTTGCGAAGCAACGGCCCGGAGGGTGGCGGGCAGGACGCCCGCCATAAACTGCCAGGC
ATCAAATTAAGCAGAAGGCCATCCTGACGGATGGCCTTTTTGCGTTTCTACAAACTCTTT
TGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCAT