# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/ah04096.fasta.nr -Q ../query/KIAA2012.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA2012, 555 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7794500 sequences Expectation_n fit: rho(ln(x))= 6.4070+/-0.000212; mu= 6.3853+/- 0.012 mean_var=175.6613+/-33.792, 0's: 37 Z-trim: 158 B-trim: 344 in 1/66 Lambda= 0.096769 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|119590707|gb|EAW70301.1| hCG1776789, isoform CR (1027) 1637 241.4 9.6e-61 gi|124244085|ref|NP_001013793.2| hypothetical prot (1059) 1581 233.6 2.2e-58 gi|109486134|ref|XP_576575.2| PREDICTED: hypotheti (1092) 1458 216.4 3.3e-53 gi|149046057|gb|EDL98950.1| rCG22344 [Rattus norve ( 222) 876 134.3 3.6e-29 gi|148667715|gb|EDL00132.1| mCG142695 [Mus musculu ( 222) 872 133.8 5.2e-29 gi|149426200|ref|XP_001516773.1| PREDICTED: hypoth ( 630) 634 101.1 1e-18 gi|210114005|gb|EEA61768.1| hypothetical protein B (1876) 624 100.3 5.2e-18 gi|148667714|gb|EDL00131.1| mCG116548 [Mus musculu ( 549) 614 98.2 6.4e-18 gi|210102797|gb|EEA50842.1| hypothetical protein B (1943) 612 98.6 1.7e-17 gi|126338045|ref|XP_001372104.1| PREDICTED: simila ( 433) 597 95.7 2.9e-17 gi|198429565|ref|XP_002120170.1| PREDICTED: hypoth (1987) 589 95.5 1.6e-16 gi|115899370|ref|XP_800754.2| PREDICTED: hypotheti (1717) 551 90.1 5.8e-15 gi|149046058|gb|EDL98951.1| rCG22271 [Rattus norve ( 592) 539 87.8 9.5e-15 gi|56471951|gb|EAL49477.1| hypothetical protein EH (1575) 494 82.1 1.4e-12 gi|121907959|gb|EAY12843.1| hypothetical protein T (1578) 478 79.8 6.4e-12 gi|219525739|gb|ACL15288.1| p200 [Babesia bovis] ( 555) 462 77.0 1.6e-11 gi|219525737|gb|ACL15287.1| p200 [Babesia bovis] ( 720) 462 77.2 1.8e-11 gi|219525741|gb|ACL15289.1| p200 [Babesia bovis] ( 647) 460 76.8 2.1e-11 gi|121892196|gb|EAX97497.1| virulent strain associ (1078) 458 76.8 3.5e-11 gi|194173558|gb|EDW87169.1| GE16990 [Drosophila ya ( 561) 452 75.6 4.2e-11 gi|121910014|gb|EAY14867.1| trichohyalin, putative ( 588) 436 73.4 2e-10 gi|83616161|gb|ABC25605.1| anonymous antigen-2 [Ba ( 718) 435 73.4 2.5e-10 gi|115931713|ref|XP_001195048.1| PREDICTED: hypoth ( 293) 426 71.6 3.4e-10 gi|221487681|gb|EEE25913.1| calmodulin-binding dom (2438) 439 74.6 3.6e-10 gi|194123384|gb|EDW45427.1| GM16758 [Drosophila se ( 437) 426 71.9 4.4e-10 gi|165899546|gb|EDR26122.1| trichohyalin, putative (1229) 432 73.3 4.7e-10 gi|121892425|gb|EAX97716.1| smooth muscle caldesmo (1054) 431 73.0 4.7e-10 gi|115898067|ref|XP_800531.2| PREDICTED: hypotheti ( 267) 422 71.0 4.8e-10 gi|169801878|gb|EAL45229.2| hypothetical protein, ( 919) 428 72.6 5.8e-10 gi|49119689|gb|AAH72561.1| Gm973 protein [Mus musc ( 763) 424 71.9 7.6e-10 gi|219525743|gb|ACL15290.1| p200 [Babesia bovis] ( 611) 422 71.5 8e-10 gi|121890427|gb|EAX95803.1| erythrocyte binding pr (1346) 424 72.2 1.1e-09 gi|156070762|gb|ABU45177.1| unknown [Solanum melon ( 814) 420 71.4 1.2e-09 gi|47224421|emb|CAG08671.1| unnamed protein produc ( 441) 416 70.5 1.2e-09 gi|165898728|gb|EDR25512.1| hypothetical protein E ( 960) 420 71.5 1.3e-09 gi|7549210|gb|AAF63787.1|AF142406_1 200 kDa antige (1108) 420 71.5 1.4e-09 gi|190660067|gb|EDV57259.1| GG24735 [Drosophila er ( 478) 414 70.2 1.5e-09 gi|121890311|gb|EAX95692.1| trichohyalin, putative (1690) 422 72.0 1.5e-09 gi|115898452|ref|XP_784255.2| PREDICTED: similar t (4378) 427 73.3 1.7e-09 gi|114225799|gb|ABI55598.1| TonB family protein [A ( 333) 410 69.5 1.8e-09 gi|187972113|gb|EDU39612.1| conserved hypothetical (1031) 417 71.1 1.8e-09 gi|115920126|ref|XP_001178312.1| PREDICTED: hypoth ( 533) 411 69.9 2.1e-09 gi|89304731|gb|EAS02719.1| TPR Domain containing p (2086) 415 71.2 3.4e-09 gi|121889999|gb|EAX95395.1| trichohyalin, putative ( 894) 409 69.9 3.6e-09 gi|109472296|ref|XP_001060556.1| PREDICTED: hypoth ( 300) 402 68.3 3.6e-09 gi|89286901|gb|EAR84895.1| hypothetical protein TT (1878) 413 70.8 3.8e-09 gi|116505576|gb|EAU88471.1| predicted protein [Cop ( 640) 406 69.3 3.9e-09 gi|194160170|gb|EDW75071.1| GK19899 [Drosophila wi (1914) 413 70.9 3.9e-09 gi|22945532|gb|AAF51469.2| CG2839 [Drosophila mela ( 826) 407 69.6 4.1e-09 gi|119573775|gb|EAW53390.1| hCG1642996, isoform CR (1696) 408 70.1 5.8e-09 >>gi|119590707|gb|EAW70301.1| hCG1776789, isoform CRA_a (1027 aa) initn: 1960 init1: 1504 opt: 1637 Z-score: 1246.8 bits: 241.4 E(): 9.6e-61 Smith-Waterman score: 2639; 88.613% identity (89.027% similar) in 483 aa overlap (118-555:545-1027) 90 100 110 120 130 140 KIAA20 TPFLKESGNALDYQEEAGRPLRETHHNDQDPEPRSMTLDSPRASRTEHIQTPEADIVQKV : ..: :::::::::::::::::: gi|119 DPSGAYLAWKATADNIEVGIFNEAGFRGLTPTEVKITWLPAGASRTEHIQTPEADIVQKV 520 530 540 550 560 570 150 160 170 180 190 200 KIAA20 GRDYDVHHLHRGLLGYGPESPERLSAVYTSLLPREREGKAEPRLFSQETSANISHERDLI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 GRDYDVHHLHRGLLGYGPESPERLSAVYTSLLPREREGKAEPRLFSQETSANISHERDLI 580 590 600 610 620 630 210 220 230 240 250 260 KIAA20 NEAKRKEKPKKDKTKGPKSEREGKVYGQAEAAIGKSKDSKAKKKLEKKTRPQRKRTQKER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NEAKRKEKPKKDKTKGPKSEREGKVYGQAEAAIGKSKDSKAKKKLEKKTRPQRKRTQKER 640 650 660 670 680 690 270 280 290 300 310 320 KIAA20 NLEIAAELSGPDVSYEETEDTSNRGSFASDSFVEDPWLSPKYDAQESQVSLDGRSSPSQI :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 NLEIAAELSGPDVSYEETEDTSNRGSFASDSFVEDPWLSPKYDAQESQVSLDGRSSPSQI 700 710 720 730 740 750 330 340 KIAA20 ATVTGNMESKEERRCEDPSK---------------------------------------- :::::::::::::::::::: gi|119 ATVTGNMESKEERRCEDPSKLDRGSSVLTWRDCKDGKAAPNYIALTKTARPPNGLIVLLW 760 770 780 790 800 810 350 360 370 380 390 400 KIAA20 -----ALLTKREQEKASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKMEEE ::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 YLLTLALLTKREQEKASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKMEEE 820 830 840 850 860 870 410 420 430 440 450 460 KIAA20 LELEQQRRTEEIRLRKQRLQEEQQRQEEEERKQQLRLKAAQERARQQQEEFRRKLRELQR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 LELEQQRRTEEIRLRKQRLQEEQQRQEEEERKQQLRLKAAQERARQQQEEFRRKLRELQR 880 890 900 910 920 930 470 480 490 500 510 520 KIAA20 KKQQEEAERAEAEKQRQEELEMQLEEEQKHLMEMAEEERLEYQRRKQEAEEKARLEAEER :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|119 KKQQEEAERAEAEKQRQEELEMQLEEEQKHLMEMAEEERLEYQRRKQEAEEKARLEAEER 940 950 960 970 980 990 530 540 550 KIAA20 RQKEEEAARLALEEATKQAQEQARYWIFGQQLP ::::::::::::::::::::::::::::::::: gi|119 RQKEEEAARLALEEATKQAQEQARYWIFGQQLP 1000 1010 1020 >>gi|124244085|ref|NP_001013793.2| hypothetical protein (1059 aa) initn: 1295 init1: 1106 opt: 1581 Z-score: 1204.4 bits: 233.6 E(): 2.2e-58 Smith-Waterman score: 1581; 58.658% identity (79.004% similar) in 462 aa overlap (92-547:591-1045) 70 80 90 100 110 120 KIAA20 PQSCINKALICSNRKEFYTRKLHIDMTPFLKESGNALDYQEEAGRPLRETHHNDQDPEPR .: :. :: .:: : ::: . ...:::: : gi|124 PLGQANAGAGASLHGNLYETSSRLAQAAESQERGSELDSHEEPGGPLRGNAKDSQDPELR 570 580 590 600 610 620 130 140 150 160 170 180 KIAA20 SMTLDSPRASRTEHIQTPEADIVQKVGRDYDVHHLHRGLLGYGPESPERLSAVYTSLLPR . :: .: .:. : ::: .... ::.::::::: : : :..:. : :: gi|124 NKTLACLSTSLAEYNQPSEADTLKSMDGDYNVHHLHRGPLKREPAFPKKLA----SETPR 630 640 650 660 670 190 200 210 220 230 240 KIAA20 EREGKAEPRLFSQETSANISHERDLINEAKRKEKPKKDKTKGPKSEREGKVYGQAEAAIG ... : . .:..:.:...:.: .::...::::.. : ..:. :.::: . :::::: : gi|124 KKK-KRRSKLLNQKTGVGINHGKDLVDKAKRKKRTKTHQAKALKKEREERGLGQAEAAGG 680 690 700 710 720 730 250 260 270 280 290 KIAA20 KSKDSKAKKKLE---KKTRPQRK--RTQKERNLEIAAELSGPDVSY-EETEDTSNRGSFA : : :: ::: : :: . :: ::.::::.:.:: :: :.. .:. ::..: . gi|124 KPKHSKIKKKSELTPKKEKLGRKMKRTHKERNMEMAAGLSKSDITNSKEAGGTSHQGLLR 740 750 760 770 780 790 300 310 320 330 340 350 KIAA20 SDSFVEDPWLSPKYDAQESQVSLDGRSSPSQIATVTGNMESKEERRCEDPSKALLTKREQ : : . . :: . :: ::::..::: : : . :...:: .::: ::::::: :..: gi|124 SHSAAGQ--LSLELDALESQVAIDGRLSSIQATDVASDMECEEERSHEDPSKALQDKKQQ 800 810 820 830 840 850 360 370 380 390 400 410 KIAA20 EKASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKMEEELELEQQRRTEEIR :::: ::.: :.::::::.::..:::::: :..::::.:.::.::::::::::::: : gi|124 EKASRDRIRIEKAEMRWLKVEQRRREQEELTWLHKEQLEKAEKMKEELELEQQRRTEENR 860 870 880 890 900 910 420 430 440 450 460 470 KIAA20 LRKQRLQEEQQRQEEEERKQQLRLKAAQERARQQQEEFRRKLRELQRKKQQEEAERAEAE ::::::.::.:.::: :.:..:.:.::.:::::::::.::::.:.::::::: ::::::: gi|124 LRKQRLEEERQQQEEAEKKRRLQLQAARERARQQQEELRRKLQEIQRKKQQEAAERAEAE 920 930 940 950 960 970 480 490 500 510 520 530 KIAA20 KQRQEELEMQLEEEQKHLMEMAEEERLEYQRRKQEAEEKARLEAEERRQKEEEAARLALE ::::.:::::: ::::.:::::::::::::..: :::::: ::::::..:::::.:::: gi|124 KQRQKELEMQLAEEQKRLMEMAEEERLEYQQQKLAAEEKARQEAEERRKQEEEAAKLALE 980 990 1000 1010 1020 1030 540 550 KIAA20 EATKQAQEQARYWIFGQQLP :::: :::: :: gi|124 EATKLAQEQIRYLDRGTTAVRACSEA 1040 1050 >>gi|109486134|ref|XP_576575.2| PREDICTED: hypothetical (1092 aa) initn: 1696 init1: 926 opt: 1458 Z-score: 1111.4 bits: 216.4 E(): 3.3e-53 Smith-Waterman score: 1548; 56.745% identity (77.302% similar) in 467 aa overlap (92-546:591-1047) 70 80 90 100 110 120 KIAA20 PQSCINKALICSNRKEFYTRKLHIDMTPFLKESGNALDYQEEAGRPLRETHHNDQDPEPR .: :. : :.:::: : : . ...:::::: gi|109 LGQANTGARASLRGSLYEKTSSCSAEAAESQERGDELAYREEAGGPHRGNVEGSQDPEPR 570 580 590 600 610 620 130 140 150 160 170 180 KIAA20 SMTLDSPRASRTEHIQTPEADIVQKVGRDYDVHHLHRGLLGYGPESPERLSAVYTSLLPR ..:.. .: .: : ::: .... :::.::::::: : . : ..:.. :::::: gi|109 NVTFEPLSTSLAEDNQPSEADTLKNMDRDYNVHHLHRGPLEHEPAFQKKLDSENTSLLPR 630 640 650 660 670 680 190 200 210 220 230 240 KIAA20 EREGKAEPRLFSQETSANISHERDLINEAKRKEKPKKDKTKGPKSEREGKVYGQAEAAIG ... : .:.:. :. . : : :::...::::.. : ..:.::.::::. ::::: : gi|109 KKK-KRRPKLIHQKILVAIHHGRDLVDKAKRKKRTKTHQAKAPKKEREGRGLRQAEAAGG 690 700 710 720 730 250 260 270 280 290 KIAA20 KSKDSKAKKKL-----EKKTRPQRKRTQKERNLEIAAELSGPDVS-YEETEDTSNRGSFA : : ::.::: :.. . :::.::::.:.:: :: : . .:. ::.:: . gi|109 KPKHSKTKKKSDLTPNEQELGTKVKRTHKERNMELAAGLSTSDSTDSKEAGGTSHRGLLR 740 750 760 770 780 790 300 310 320 330 340 KIAA20 SDSFV------EDPWLSPKYDAQESQVSLDGRSSPSQIATVTGNMESKEERRCEDPSKAL : . ::: . :: .:::..::: : :: . ::...::.:. : gi|109 PHSAAGRLHSRSAKWLSLELDALDSQVAIDGRLSRSQATDVTSDVESEED---------L 800 810 820 830 840 850 350 360 370 380 390 400 KIAA20 LTKREQEKASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKMEEELELEQQR :..:.::: ::.: . ::::: ::. :::::: .:. ::::.:.::.::::::.:: gi|109 QDKKQQQKASQDRIRIQNAEMRWKAVEQGRREQEELIRLHWEQLEKAEKMNEELELEHQR 860 870 880 890 900 910 410 420 430 440 450 460 KIAA20 RTEEIRLRKQRLQEEQQRQEEEERKQQLRLKAAQERARQQQEEFRRKLRELQRKKQQEEA ::::::::::::.::.:.::: :::..:.:.::.:::::::::.::::.:.::::::::: gi|109 RTEEIRLRKQRLEEERQQQEEAERKRRLQLQAARERARQQQEELRRKLQEMQRKKQQEEA 920 930 940 950 960 970 470 480 490 500 510 520 KIAA20 ERAEAEKQRQEELEMQLEEEQKHLMEMAEEERLEYQRRKQEAEEKARLEAEERRQKEEEA ::::::::::.:::.:: .:::.::::::::::::::.::::::::. ::::::..:::: gi|109 ERAEAEKQRQKELELQLADEQKRLMEMAEEERLEYQRQKQEAEEKAKQEAEERRKQEEEA 980 990 1000 1010 1020 1030 530 540 550 KIAA20 ARLALEEATKQAQEQARYWIFGQQLP :.:::::::: :::: : gi|109 AKLALEEATKLAQEQIRQKAALEKHLHFHQELSKEASGLQWTQNISRPWVYSYFQSLQTP 1040 1050 1060 1070 1080 1090 >>gi|149046057|gb|EDL98950.1| rCG22344 [Rattus norvegicu (222 aa) initn: 1110 init1: 876 opt: 876 Z-score: 680.0 bits: 134.3 E(): 3.6e-29 Smith-Waterman score: 876; 78.531% identity (93.785% similar) in 177 aa overlap (370-546:1-177) 340 350 360 370 380 390 KIAA20 RRCEDPSKALLTKREQEKASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKM ::: ::. :::::: .:. ::::.:.:: gi|149 MRWKAVEQGRREQEELIRLHWEQLEKAEKM 10 20 30 400 410 420 430 440 450 KIAA20 EEELELEQQRRTEEIRLRKQRLQEEQQRQEEEERKQQLRLKAAQERARQQQEEFRRKLRE .::::::.::::::::::::::.::.:.::: :::..:.:.::.:::::::::.::::.: gi|149 NEELELEHQRRTEEIRLRKQRLEEERQQQEEAERKRRLQLQAARERARQQQEELRRKLQE 40 50 60 70 80 90 460 470 480 490 500 510 KIAA20 LQRKKQQEEAERAEAEKQRQEELEMQLEEEQKHLMEMAEEERLEYQRRKQEAEEKARLEA .:::::::::::::::::::.:::.:: .:::.::::::::::::::.::::::::. :: gi|149 MQRKKQQEEAERAEAEKQRQKELELQLADEQKRLMEMAEEERLEYQRQKQEAEEKAKQEA 100 110 120 130 140 150 520 530 540 550 KIAA20 EERRQKEEEAARLALEEATKQAQEQARYWIFGQQLP ::::..:::::.:::::::: :::: : gi|149 EERRKQEEEAAKLALEEATKLAQEQIRQKAALEKHLHFHQELSKEASGLQWTQNISRPWV 160 170 180 190 200 210 >>gi|148667715|gb|EDL00132.1| mCG142695 [Mus musculus] (222 aa) initn: 1173 init1: 872 opt: 872 Z-score: 677.0 bits: 133.8 E(): 5.2e-29 Smith-Waterman score: 872; 77.966% identity (93.220% similar) in 177 aa overlap (370-546:1-177) 340 350 360 370 380 390 KIAA20 RRCEDPSKALLTKREQEKASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKM ::::.::..:::::: :..::::.:.:: gi|148 MRWLKVEQRRREQEELTWLHKEQLEKAEKM 10 20 30 400 410 420 430 440 450 KIAA20 EEELELEQQRRTEEIRLRKQRLQEEQQRQEEEERKQQLRLKAAQERARQQQEEFRRKLRE .::::::::::::: :::::::.::.:.::: :.:..:.:.::.:::::::::.::::.: gi|148 KEELELEQQRRTEENRLRKQRLEEERQQQEEAEKKRRLQLQAARERARQQQEELRRKLQE 40 50 60 70 80 90 460 470 480 490 500 510 KIAA20 LQRKKQQEEAERAEAEKQRQEELEMQLEEEQKHLMEMAEEERLEYQRRKQEAEEKARLEA .::::::: :::::::::::.:::::: ::::.:::::::::::::..: :::::: :: gi|148 IQRKKQQEAAERAEAEKQRQKELEMQLAEEQKRLMEMAEEERLEYQQQKLAAEEKARQEA 100 110 120 130 140 150 520 530 540 550 KIAA20 EERRQKEEEAARLALEEATKQAQEQARYWIFGQQLP ::::..:::::.:::::::: :::: : gi|148 EERRKQEEEAAKLALEEATKLAQEQIRQKAALDKHLHFHQELSKEASGLQWTQNISRPWV 160 170 180 190 200 210 >>gi|149426200|ref|XP_001516773.1| PREDICTED: hypothetic (630 aa) initn: 604 init1: 457 opt: 634 Z-score: 492.4 bits: 101.1 E(): 1e-18 Smith-Waterman score: 786; 40.984% identity (60.656% similar) in 427 aa overlap (157-546:46-461) 130 140 150 160 170 180 KIAA20 SPRASRTEHIQTPEADIVQKVGRDYDVHHLHRGLLGYGPESPERLSAVYTSLLPREREGK ::: : : : : . . .: .: gi|149 YPEKVEERPGQESSKSQLRITSAQTEKSPGHRGE-GRDPGRP---SPASDGAAAEELRGT 20 30 40 50 60 70 190 200 210 220 230 KIAA20 AEPRLFSQETSANISHERDLINEAKRKEKPKKDKTKGPKSE-------REGKVYGQAEAA : :. .: .: : : :...:: ..::. :: ::.. . gi|149 RAPAGRSSSSSPKILDPR-----APRSKSPKISETKNTGSENPKFQEARESRPEIREPQI 80 90 100 110 120 240 250 260 270 280 290 KIAA20 IG-KSKDSKAKKKLEKKTR-PQRK------RTQKERNLEIAAELSGPDV-SYEETEDTSN : .:. .. .. :... :.: : ..: . :. ::. : ... .. gi|149 PGSQSRPKEERRAGENRSAAPKRAAAAAGVRKGERRRRRPAGGPETPDAPSRGDADHPAQ 130 140 150 160 170 180 300 310 320 330 340 350 KIAA20 RGSFASDSFVEDPWLSPKYDAQESQVSLDGRSSPSQIATVTGNMESKEERRCEDPSKALL ::. : .:: : : :.: : : .: : : :. :.: :: :.:: gi|149 RGDSPRDPGPRDPQLRPP-PAHEPQGPAVERPGPPPPAPVPGTPGSEEGRRG-GASEALP 190 200 210 220 230 240 360 370 380 390 400 410 KIAA20 TKREQEKASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKMEEELELEQQRR .: :::.: ::.:::::: : ::::.:::::::: . .:::::: ....::.: :: :: gi|149 GNRWQEKTSRDRIRAERAERRRLEVERKRREQEEQTRQRQEQLERMERIKEEFEREQLRR 250 260 270 280 290 300 420 430 440 450 460 470 KIAA20 TEEIRLRKQRLQEEQQRQEEEERKQQLRLKAAQERARQQQEEFRRKLRELQRKKQQEEAE .:: ::..:: . :..::: : .. . .:.::.: .::...:.::.: :::.::::: gi|149 AEENRLQRQRSEAERRRQEAEAAGREQQERAVQEQALRQQDQLRQKLKEAQRKRQQEEAA 310 320 330 340 350 360 480 490 500 KIAA20 RA---------------------EAEKQRQEELEMQLEEEQKHLMEMAEEERLEYQRRKQ :: :::.::.:: :::..: ::::::::: ..:.. gi|149 RAVLCPPRRAHPPPPNAPCSVPAEAERQRREESATLAAEEQRRLREMAEEERLEREKRRR 370 380 390 400 410 420 510 520 530 540 550 KIAA20 EAEEKARLEAEERRQKEEEAARLALEEATKQAQEQARYWIFGQQLP : :::::::::::.::: :: :::::: ::.. :: gi|149 EEAEKARLEAEERRRKEEAAASLALEEARIQARQPARPRGFDCRVYYFFEVSEPRQNSAS 430 440 450 460 470 480 gi|149 LLDKAGHPHGHPPRCPVYRYLCDKFTPAELRDGNETPGSPLTGQRPCSEAVTSSRRRRGP 490 500 510 520 530 540 >>gi|210114005|gb|EEA61768.1| hypothetical protein BRAFL (1876 aa) initn: 542 init1: 542 opt: 624 Z-score: 479.6 bits: 100.3 E(): 5.2e-18 Smith-Waterman score: 627; 29.580% identity (56.870% similar) in 524 aa overlap (35-546:1332-1818) 10 20 30 40 50 60 KIAA20 SRSDHLDLFSSLIFTTANTEPRANLHMNLYETSPLTQTTEKQGAQQSLEAAAQKTGEPQS : .: : :.. . : :.:. :. gi|210 EKPEKDEQKARVPLAPVAETKKEVKPTPKKEEAPKKVETPKKAEPPKKEEPAKKVETPKP 1310 1320 1330 1340 1350 1360 70 80 90 100 110 120 KIAA20 CINKALICSNRKEFYTRKLHIDMTPFLKESGNALDYQEEAGRPLRETHHNDQDPEP-RSM .: ..: .: . ::. . . : .:.... . : . . gi|210 AKEKKEKVVAKEEPAPKKEE-------KEKEKESPAKAEKHPKEKESKKKKKPKSPVKEV 1370 1380 1390 1400 1410 130 140 150 160 170 180 KIAA20 TLDSPRASRTEHIQTPEADIVQKVGRDYDVHHLHRGLLGYGPESPERLSAVYTSLLPRER . . :. . : ::: ..: :.. : : . . . ..:: : gi|210 AKEEPEPPKEE---TPEPP-AEKPGKS-----------GKGSAKSGKSTKSHSSLEDRPT 1420 1430 1440 1450 190 200 210 220 230 240 KIAA20 EGKAEPRL-FSQETSANISHERDLINEAKRKEKPKKDKTKGPKSEREGKVYGQAEAAIGK ..:. . : . ... . .: . :: : :.:.: : ::: gi|210 FVIGQPKTEVKAEEPLPVLPKKEAVPKATKAAPAKKGGKKKGKKEKEKK---PEEAAPEA 1460 1470 1480 1490 1500 1510 250 260 270 280 290 300 KIAA20 SKDSKA-KKKLEKKTRPQRKRTQKERNLEIAAELSGPDVSYEETEDTSNRGSFASDSFVE ... : .... .. :. .. . : . : :. :: :.: .. : . . gi|210 EEEAPAPEEEIVRSPTPEPEEPEPEPEPEPE-----PEPEPEEEEETPSE----SPTKAS 1520 1530 1540 1550 1560 310 320 330 340 350 KIAA20 DPWLSPKYDAQESQVSLDGRSSPSQIATVTGNMESKEERRCE-------DPSKALLTKRE : .:. . :. :. . .: ..::.. .: : : . ..: . . gi|210 IPSATPSRASPEKTVT-PALVQPLPFGTVNAPPSTKSEDSAEADHGVDEEAAEAAKAAAR 1570 1580 1590 1600 1610 1620 360 370 380 390 400 410 KIAA20 QEKASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKMEEELELEQQRRTEEI ...:. . :: :. : :::.::.:.:::.. .::..:: ..:..::: :..:: :: gi|210 EKRAQREAARAAAAQKRKEEVERKRKEREEQKRREQEEIERQERMKQELEDERKRRDEEH 1630 1640 1650 1660 1670 1680 420 430 440 450 460 470 KIAA20 RLRKQRLQEEQQRQEEEERKQQLRLKAAQERARQQQEEFRRKLRELQRKKQQEEAERAE- . ::....::...: .::.:.. : :: :.::.:.:: . :.::::..:: ..:: gi|210 KRRKEQMEEEKKKQADEEEKRRQAEIARLERERRQQDEYRRMMAEMQRKKKEEEQRKAEI 1690 1700 1710 1720 1730 1740 480 490 500 510 520 530 KIAA20 -AEKQRQEELEMQLEEEQKHLMEMAEEERLEYQRRKQEAEEKARLEAEERRQKEEEAARL ::: :.:: : . :::.: . .: :::::::.:.:.: ::. : : :::: .::: ::. gi|210 AAEKAREEE-ERRREEEEK-MAQMEEEERLEYERQKREEEERRRKEEEERRIREEEEARI 1750 1760 1770 1780 1790 1800 540 550 KIAA20 ALEEATKQAQEQARYWIFGQQLP .::: :...:. gi|210 RMEEARLLAERMAKERAILEEKLKFQRGLASESSNLEHGQNLNPAFTFSYFELLQLLGIQ 1810 1820 1830 1840 1850 1860 >>gi|148667714|gb|EDL00131.1| mCG116548 [Mus musculus] (549 aa) initn: 372 init1: 247 opt: 614 Z-score: 478.0 bits: 98.2 E(): 6.4e-18 Smith-Waterman score: 614; 45.038% identity (68.702% similar) in 262 aa overlap (92-347:281-535) 70 80 90 100 110 120 KIAA20 PQSCINKALICSNRKEFYTRKLHIDMTPFLKESGNALDYQEEAGRPLRETHHNDQDPEPR .: :. :: .:: : ::: . ...:::: : gi|148 PLGQANAGAGASLHGNLYETSSRLAQAAESQERGSELDSHEEPGGPLRGNAKDSQDPELR 260 270 280 290 300 310 130 140 150 160 170 180 KIAA20 SMTLDSPRASRTEHIQTPEADIVQKVGRDYDVHHLHRGLLGYGPESPERLSAVYTSLLPR . :: .: .:. : ::: .... ::.::::::: : : :..:. : :: gi|148 NKTLACLSTSLAEYNQPSEADTLKSMDGDYNVHHLHRGPLKREPAFPKKLA----SETPR 320 330 340 350 360 190 200 210 220 230 240 KIAA20 EREGKAEPRLFSQETSANISHERDLINEAKRKEKPKKDKTKGPKSEREGKVYGQAEAAIG ... : . .:..:.:...:.: .::...::::.. : ..:. :.::: . :::::: : gi|148 KKK-KRRSKLLNQKTGVGINHGKDLVDKAKRKKRTKTHQAKALKKEREERGLGQAEAAGG 370 380 390 400 410 420 250 260 270 280 290 KIAA20 KSKDSKAKKKLE---KKTRPQRK--RTQKERNLEIAAELSGPDVSY-EETEDTSNRGSFA : : :: ::: : :: . :: ::.::::.:.:: :: :.. .:. ::..: . gi|148 KPKHSKIKKKSELTPKKEKLGRKMKRTHKERNMEMAAGLSKSDITNSKEAGGTSHQGLLR 430 440 450 460 470 480 300 310 320 330 340 350 KIAA20 SDSFVEDPWLSPKYDAQESQVSLDGRSSPSQIATVTGNMESKEERRCEDPSKALLTKREQ : : . :: . :: ::::..::: : : . :...:: .::: ::::: gi|148 SHSAA--GQLSLELDALESQVAIDGRLSSIQATDVASDMECEEERSHEDPSKVWTGVLTR 490 500 510 520 530 540 360 370 380 390 400 410 KIAA20 EKASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKMEEELELEQQRRTEEIR gi|148 GSSVLT >>gi|210102797|gb|EEA50842.1| hypothetical protein BRAFL (1943 aa) initn: 546 init1: 546 opt: 612 Z-score: 470.3 bits: 98.6 E(): 1.7e-17 Smith-Waterman score: 620; 28.727% identity (57.818% similar) in 550 aa overlap (24-546:1370-1885) 10 20 30 40 50 KIAA20 KVMRSRSDHLDLFSSLIFTTANTEPRANLHMNLYETSPLTQTTEKQGAQQSLE .:. . . .:...: .. . : gi|210 PAAKPAAKPSEPLKPDVTNYGKADAPEKEEKPEKDEQKARVPLAPVAETKKEVKPTPKKE 1340 1350 1360 1370 1380 1390 60 70 80 90 100 110 KIAA20 AAAQKTGEPQSCINKALICSNRKEFYTRKLHIDMTPFLKESGNALDYQEEAGRPLRETHH : .:. :. :: .:: ..: .. ::. . . .:: . : .: .. gi|210 EAPKKVETPK----KA--EPPKKEEPAKK--VETPKPAKEKKEKVVAKEEPA-PKKEEKE 1400 1410 1420 1430 1440 1450 120 130 140 150 160 170 KIAA20 NDQDPEPRSMTLDSPRASRTEHIQTPEADIVQKVGRDYDVHHLHRGLLGYGPESPERLSA .... .. :. ..... . :.. :..:... :: :.. gi|210 KEKESPAKAE--KHPKEKESKKKKKPKSP-VKEVAKEE-------------PEPPKE--- 1460 1470 1480 1490 180 190 200 210 220 KIAA20 VYTSLLPREREGK-AEPRLFSQETSANISHERD----LINEAKRKEKPKKDKTKGPKSER : : :. :: :. : ... . : .: .:.. : . : .. ::.: gi|210 -ETPEPPAEKPGKSAKGSAKSGKSTKSHSSLEDRPTFVIGQPKTEVKAEEPLPVLPKKEA 1500 1510 1520 1530 1540 1550 230 240 250 260 270 KIAA20 EGKVYGQAEAAIG-KSKDSKAKKKLEKKTRPQ-------------RKRTQKERNLEIAAE :. : : : :.: .: :.: ... :. :. : . ..:: : gi|210 VPKATKAAPAKKGGKKKGKKEKEKKPEEAAPEAEEEAPAPEEEIVRSPTPEPEELEPEPE 1560 1570 1580 1590 1600 1610 280 290 300 310 320 330 KIAA20 LSG-PDVSYEETEDTSNRGSFASDSFVEDPWLSPKYDAQESQVSLDGRSSPSQIATVTGN :. :: :.: .. : . . : .:. . : ... . .: ..::.. gi|210 PEPEPEPEPEEEEETPSE----SPTKASIPSATPSRASPE-KTATPALVQPLPFGTVNAP 1620 1630 1640 1650 1660 340 350 360 370 380 KIAA20 MESKEERRCE-------DPSKALLTKREQEKASWDRLRAERAEMRWLEVEKKRREQEEQR .: : : . ..: . ....:. . :: :. : :::.::.:.:::. gi|210 PSTKSEDSAEADHGVDEEAAEAAKAAAREKRAQREAARAAAAQKRKEEVERKRKEREEQK 1670 1680 1690 1700 1710 1720 390 400 410 420 430 440 KIAA20 QLQQEQLERAKKMEEELELEQQRRTEEIRLRKQRLQEEQQRQEEEERKQQLRLKAAQERA . .::..:: ..:..::: :..:: :: . ::....::...: .::.:.. : :: gi|210 RREQEEIERQERMKQELEDERKRRDEEHKRRKEQMEEEKKKQADEEEKRRQAEIARLERE 1730 1740 1750 1760 1770 1780 450 460 470 480 490 500 KIAA20 RQQQEEFRRKLRELQRKKQQEEAERAEAEKQRQEELEMQLEEEQKHLMEMAEEERLEYQR :.::.:.:: . :.::::..:: ..:: .: .: : . .::.... .: :::::::.: gi|210 RRQQDEYRRMMAEMQRKKKEEEQRKAEIAAERAREEEERRREEEEKMAQMEEEERLEYER 1790 1800 1810 1820 1830 1840 510 520 530 540 550 KIAA20 RKQEAEEKARLEAEERRQKEEEAARLALEEATKQAQEQARYWIFGQQLP .:.: ::. : : :::: .::: ::. .::: :...:. gi|210 QKREEEERRRKEEEERRIREEEEARIRMEEARLLAERMAKERAILEEKLKFQRGLASESS 1850 1860 1870 1880 1890 1900 gi|210 NLEHGQNLNPAFTFSYFELLQLLGLQFPTEEGDKDVNG 1910 1920 1930 1940 >>gi|126338045|ref|XP_001372104.1| PREDICTED: similar to (433 aa) initn: 811 init1: 533 opt: 597 Z-score: 466.3 bits: 95.7 E(): 2.9e-17 Smith-Waterman score: 804; 42.706% identity (65.517% similar) in 377 aa overlap (220-546:4-375) 190 200 210 220 230 240 KIAA20 RLFSQETSANISHERDLINEAKRKEKPKKDKTKGPKSEREGKVYGQAEAAIGKSKDSKAK : : ...: : ... ::. : . gi|126 MPPKMAGSRKNRTEK-QPLSRSRKGKDAPPKLS 10 20 30 250 260 270 280 290 KIAA20 KKLEKKTRPQRK---RTQKERNLEIAAELSGPDVSYEETEDTSNRGSFA----SD---SF :. : . :.:. .:.... :. ..:..: . : .::. :. :: :: gi|126 KQAEDRISPERQMPEKTKRRKRNEVNKS-KAPNTS--KGEKIKNRSEFVGEEPSDEDSSF 40 50 60 70 80 300 310 320 330 340 350 KIAA20 ----VEDPWLSPKYDAQESQVSLDGRSSPSQIATVTGNMESKEERRCEDPSKALLTKREQ .:: . :.: ::::: : .: :.: ..: :. : :: . : :: . ..: gi|126 SAFSLEDFEVPLKFDDPESQVSRDEKSFPTQPINTTENIGS-EEDQSADTSKMSPVTQHQ 90 100 110 120 130 140 360 370 380 390 400 410 KIAA20 EKASWDRLRAERAEMRWLEVEKKRREQEEQRQLQQEQLERAKKMEEELELEQQRRTEEIR :: ... .:::::: :::..:.:.::... ::: .: .:..:::: :::::.:: : gi|126 EKIPREKILTERAEMRLREVERRRKEKEEKKRQQQEAQKRLEKLKEELEQEQQRRAEEKR 150 160 170 180 190 200 420 430 KIAA20 L------------------------------------RKQRLQEEQQRQEEEERKQQLRL : ..:::.::.:.::::::.. . gi|126 LAGLEFQLAGRCREAKGQGMAGPQPRESGFWALFMDLQRQRLEEERQEQEEEERRKLQQE 210 220 230 240 250 260 440 450 460 470 480 490 KIAA20 KAAQERARQQQEEFRRKLRELQRKKQQEEAERAEAEKQRQEELEMQLEEEQKHLMEMAEE .::. ::.: :::.::::.:.::..:..::.:::::::::.::. .::::: .:::::.: gi|126 QAAEARAKQLQEEYRRKLQEMQRRRQEDEARRAEAEKQRQKELKRMLEEEQLKLMEMAKE 270 280 290 300 310 320 500 510 520 530 540 550 KIAA20 ERLEYQRRKQEAEEKARLEAEERRQKEEEAARLALEEATKQAQEQARYWIFGQQLP ::: ::..:.: ::::: ::: .:::::: ::::::.: :.:.. : gi|126 ERLLYQKKKEEEEEKAREEAEAKRQKEEEKARLALEKAQKEAEQLEREKADLEPYQNFNQ 330 340 350 360 370 380 gi|126 DLLKEVNELKHIQNISRPWVYSYFRLLKMPGAKAVMKRELRSKLD 390 400 410 420 430 555 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 09:34:51 2009 done: Fri Mar 6 09:38:41 2009 Total Scan time: 1489.240 Total Display time: 0.220 Function used was FASTA [version 34.26.5 April 26, 2007]