hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-19050267/chunk_1/iprscan-20080502-19050267.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA2010 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF04802.5.fs Protein of unknown function (DUF625) 449.1 1.2e-135 1 PF04802.5.ls Protein of unknown function (DUF625) 451.1 1.4e-132 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF04802.5.fs 1/1 264 457 .. 1 210 [] 449.1 1.2e-135 PF04802.5.ls 1/1 264 457 .. 1 210 [] 451.1 1.4e-132 Alignments of top-scoring domains: PF04802.5.fs: domain 1 of 1, from 264 to 457: score 449.1, E = 1.2e-135 *->LknenYIdkLielFhlCEdlentdGLHmLfnIiKgiilLNkaqlLEs L+ne+YI+kL+elFh+CEdlen++GLH+L++IiKgi+lLN +l+E+ KIAA2010 264 LENEGYIKKLLELFHVCEDLENIEGLHHLYEIIKGIFLLNRTALFEV 310 mfsnDelIMdivGcLEYDPevPqsKAnHReyLGkksvkFKEvIPIkdpdl mfs e+IMd++GcLEYDP+++q++ +HRe+L +k++kFKEvIPI dp+l KIAA2010 311 MFS-EECIMDVIGCLEYDPALSQPR-KHREFL-TKTAKFKEVIPISDPEL 357 laKIHQTfRlqYLkDVVLpTPrVlvDdaifstLsSfIffNkaeIvslLQd ++KIHQT+R+qY++D VLpTP+V+ +++++stL SfIffNk+eIv +LQ+ KIAA2010 358 KQKIHQTYRVQYIQDMVLPTPSVF-EENMLSTLHSFIFFNKVEIVGMLQE 406 dekfDRLqElFDArlrdestsdKEKFVqkRkdlVffLqefcnisknLQpq dekf L +lF A+l+de+t++ +kR++lV+fL+efc++s++LQpq KIAA2010 407 DEKF--LTDLF-AQLTDEATDE-----EKRQELVNFLKEFCAFSQTLQPQ 448 sfCnsrsaffKtL<-* + r+affKtL KIAA2010 449 N----RDAFFKTL 457 PF04802.5.ls: domain 1 of 1, from 264 to 457: score 451.1, E = 1.4e-132 *->LknenYIdkLielFhlCEdlentdGLHmLfnIiKgiilLNkaqlLEs L+ne+YI+kL+elFh+CEdlen++GLH+L++IiKgi+lLN +l+E+ KIAA2010 264 LENEGYIKKLLELFHVCEDLENIEGLHHLYEIIKGIFLLNRTALFEV 310 mfsnDelIMdivGcLEYDPevPqsKAnHReyLGkksvkFKEvIPIkdpdl mfs e+IMd++GcLEYDP+++q++ +HRe+L +k++kFKEvIPI dp+l KIAA2010 311 MFS-EECIMDVIGCLEYDPALSQPR-KHREFL-TKTAKFKEVIPISDPEL 357 laKIHQTfRlqYLkDVVLpTPrVlvDdaifstLsSfIffNkaeIvslLQd ++KIHQT+R+qY++D VLpTP+V+ +++++stL SfIffNk+eIv +LQ+ KIAA2010 358 KQKIHQTYRVQYIQDMVLPTPSVF-EENMLSTLHSFIFFNKVEIVGMLQE 406 dekfDRLqElFDArlrdestsdKEKFVqkRkdlVffLqefcnisknLQpq dekf L +lF A+l+de+t++ +kR++lV+fL+efc++s++LQpq KIAA2010 407 DEKF--LTDLF-AQLTDEATDE-----EKRQELVNFLKEFCAFSQTLQPQ 448 sfCnsrsaffKtL<-* + r+affKtL KIAA2010 449 N----RDAFFKTL 457 //