hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-18382055/chunk_1/iprscan-20080502-18382055.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1994
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01166.9.fs TSC-22/dip/bun family                          150.9    8.5e-47   1
PF01166.9.ls TSC-22/dip/bun family                          152.9    7.9e-43   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01166.9.fs   1/1    1032  1091 ..     1    60 []   150.9  8.5e-47
PF01166.9.ls   1/1    1032  1091 ..     1    60 []   152.9  7.9e-43

Alignments of top-scoring domains:
PF01166.9.fs: domain 1 of 1, from 1032 to 1091: score 150.9, E = 8.5e-47
                   *->MDLVKsHLmyAVREEVEvLkeqIkeLveklnqLeeENtLLktnvSpE
                      MDLVKsHLmyAVREEVEvLkeqIkeL+ek++qLe+EN LLkt++SpE
    KIAA1994  1032    MDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPE 1078 

                   qLaqlqaqlqlae<-*
                   qLaq+qaqlq+++   
    KIAA1994  1079 QLAQFQAQLQTGS    1091 

PF01166.9.ls: domain 1 of 1, from 1032 to 1091: score 152.9, E = 7.9e-43
                   *->MDLVKsHLmyAVREEVEvLkeqIkeLveklnqLeeENtLLktnvSpE
                      MDLVKsHLmyAVREEVEvLkeqIkeL+ek++qLe+EN LLkt++SpE
    KIAA1994  1032    MDLVKSHLMYAVREEVEVLKEQIKELIEKNSQLEQENNLLKTLASPE 1078 

                   qLaqlqaqlqlae<-*
                   qLaq+qaqlq+++   
    KIAA1994  1079 QLAQFQAQLQTGS    1091 

//