hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17362856/chunk_1/iprscan-20080502-17362856.nocrc
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Query sequence: KIAA1957
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00239                                                  26.0     0.0052   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00239    1/1     381   481 .]     1    92 []    26.0   0.0052

Alignments of top-scoring domains:
SM00239: domain 1 of 1, from 381 to 481: score 26.0, E = 0.0052
                   *->tLtvkiisArnLp.........DPYVkvs.........kTkvvkktl
                      +L+v+++ A++L ++  + ++ ++ V +   +++ +++++ +vk++ 
    KIAA1957   381    RLRVHLLAAEGLYdrlcdarsiNCCVGLClvpgklqkqRSTIVKNSR 427  

                   sgfNPvWnEesetFeFevpp......s.LeieVyDk.......dfiGrvt
                       Pv+nE    F+F+   + + ++  L+i+V +k+++ +++ ++G+ +
    KIAA1957   428 ---RPVFNE---DFFFDGLGpasvrkLaLRIKVVNKgsslkrdTLLGEKE 471  

                   ippnnahqhsadglihlsell.ggrhkl<-*
                   +p              l++ll+         
    KIAA1957   472 LP--------------LTSLLpFL----    481  

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