hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-17275951/chunk_1/iprscan-20080502-17275951.nocrc
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Query sequence: KIAA1952
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF05699.5.ls hAT family dimerisation domain                  18.4    0.00035   1
PF05699.5.fs hAT family dimerisation domain                  16.6    0.00036   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00096.16.ls   1/1     173   195 ..     1    24 []    18.8    0.018
PF05699.5.fs   1/1     654   734 ..     1    94 []    16.6  0.00036
PF05699.5.ls   1/1     654   734 ..     1    94 []    18.4  0.00035

Alignments of top-scoring domains:
PF00096.16.ls: domain 1 of 1, from 173 to 195: score 18.8, E = 0.018
                   *->ykCpfdCgksFsrksnLkrHlrtH<-*
                      y+C   Cg  F    nL  H+++H   
    KIAA1952   173    YTCG-ACGIQFQFYNNLLEHMQSH    195  

PF05699.5.fs: domain 1 of 1, from 654 to 734: score 16.6, E = 0.00036
                   *->ELdkYlselpvlprnteprgledfdvLeWWkeaqnssryPiLsklAr
                      E+ +Yl+e p+++  +        d+ ++W+  +  ++   L klA+
    KIAA1952   654    EVYDYLQE-PLFQATP--------DLFQYWS--CVTQKHTKLAKLAF 689  

                   diLsiPvssaasErsFStgklgrvldesrnrlepenveaLlcledwl<-*
                    +L++P+  a s  +        +l ++r+ l pe  ++L++l++++   
    KIAA1952   690 WLLAVPAVGARSGCVNMCE--QALLIKRRRLLSPEDMNKLMFLKSNM    734  

PF05699.5.ls: domain 1 of 1, from 654 to 734: score 18.4, E = 0.00035
                   *->ELdkYlselpvlprnteprgledfdvLeWWkeaqnssryPiLsklAr
                      E+ +Yl+e p+++  +        d+ ++W+  +  ++   L klA+
    KIAA1952   654    EVYDYLQE-PLFQATP--------DLFQYWS--CVTQKHTKLAKLAF 689  

                   diLsiPvssaasErsFStgklgrvldesrnrlepenveaLlcledwl<-*
                    +L++P+  a s  +        +l ++r+ l pe  ++L++l++++   
    KIAA1952   690 WLLAVPAVGARSGCVNMCE--QALLIKRRRLLSPEDMNKLMFLKSNM    734  

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