# /hgtech/tools/fasta-34.26.5_v890/fasta34_t -T 8 -b50 -d10 -E0.01 -H -O./tmp/hh10052.fasta.nr -Q ../query/KIAA1926.ptfa /cdna2/lib/nr/nr 2 FASTA searches a protein or DNA sequence data bank version 34.26.5 April 26, 2007 Please cite: W.R. Pearson & D.J. Lipman PNAS (1988) 85:2444-2448 KIAA1926, 412 aa vs /cdna2/lib/nr/nr library 2693465022 residues in 7827732 sequences statistics sampled from 60000 to 7825248 sequences Expectation_n fit: rho(ln(x))= 5.2481+/-0.000189; mu= 11.4572+/- 0.011 mean_var=86.3868+/-16.677, 0's: 37 Z-trim: 41 B-trim: 29 in 1/65 Lambda= 0.137991 FASTA (3.5 Sept 2006) function [optimized, BL50 matrix (15:-5)] ktup: 2 join: 37, opt: 25, open/ext: -10/-2, width: 16 The best scores are: opt bits E(7827732) gi|47605684|sp|Q86UW8.1|HPLN4_HUMAN RecName: Full= ( 402) 2874 581.8 9.6e-164 gi|109124008|ref|XP_001115151.1| PREDICTED: simila ( 402) 2840 575.0 1e-161 gi|109124010|ref|XP_001115139.1| PREDICTED: simila ( 437) 2833 573.6 2.9e-161 gi|148696832|gb|EDL28779.1| hyaluronan and proteog ( 413) 2602 527.6 1.9e-147 gi|47605664|sp|Q80WM4.2|HPLN4_MOUSE RecName: Full= ( 400) 2599 527.0 2.9e-147 gi|30349291|gb|AAP22050.1| hyaluronan and proteogl ( 400) 2592 525.6 7.6e-147 gi|149035980|gb|EDL90646.1| hyaluronan and proteog ( 400) 2590 525.2 1e-146 gi|126323426|ref|XP_001365936.1| PREDICTED: simila ( 395) 1246 257.7 3.5e-66 gi|209155810|gb|ACI34137.1| Hyaluronan and proteog ( 390) 1024 213.5 6.9e-53 gi|94733594|emb|CAK05354.1| novel protein similar ( 344) 913 191.3 2.8e-46 gi|109077867|ref|XP_001112341.1| PREDICTED: cartil ( 354) 789 166.6 7.8e-39 gi|130311|sp|P10859.1|HPLN1_PIG RecName: Full=Hyal ( 354) 788 166.4 8.9e-39 gi|73952134|ref|XP_849484.1| PREDICTED: similar to ( 354) 783 165.5 1.8e-38 gi|114599309|ref|XP_517666.2| PREDICTED: cartilage ( 354) 783 165.5 1.8e-38 gi|130309|sp|P07354.1|HPLN1_CHICK RecName: Full=Hy ( 355) 783 165.5 1.8e-38 gi|2499842|sp|Q28381.1|HPLN1_HORSE RecName: Full=H ( 354) 781 165.1 2.4e-38 gi|149408431|ref|XP_001509283.1| PREDICTED: simila ( 354) 781 165.1 2.4e-38 gi|119616320|gb|EAW95914.1| hyaluronan and proteog ( 300) 779 164.6 2.7e-38 gi|130310|sp|P10915.2|HPLN1_HUMAN RecName: Full=Hy ( 354) 779 164.7 3.1e-38 gi|34784736|gb|AAH57808.1| HAPLN1 protein [Homo sa ( 354) 779 164.7 3.1e-38 gi|1709660|sp|P55252.1|HPLN1_BOVIN RecName: Full=H ( 354) 778 164.5 3.6e-38 gi|90075768|dbj|BAE87564.1| unnamed protein produc ( 353) 776 164.1 4.7e-38 gi|4218976|gb|AAD12253.1| link protein [Mus muscul ( 355) 775 163.9 5.4e-38 gi|9978489|sp|Q9QUP5.1|HPLN1_MOUSE RecName: Full=H ( 356) 775 163.9 5.4e-38 gi|149058981|gb|EDM09988.1| hyaluronan and proteog ( 343) 774 163.6 6e-38 gi|1346731|sp|P03994.2|HPLN1_RAT RecName: Full=Hya ( 354) 774 163.7 6.2e-38 gi|44890689|gb|AAH66853.1| Hyaluronan and proteogl ( 356) 773 163.5 7.1e-38 gi|118764374|gb|AAI28741.1| Hyaluronan and proteog ( 354) 770 162.9 1.1e-37 gi|126321494|ref|XP_001363211.1| PREDICTED: simila ( 354) 768 162.5 1.4e-37 gi|189524679|ref|XP_697529.3| PREDICTED: hyalurona ( 353) 766 162.1 1.9e-37 gi|149532144|ref|XP_001515187.1| PREDICTED: simila ( 163) 756 159.8 4.2e-37 gi|149622117|ref|XP_001521634.1| PREDICTED: simila ( 545) 753 159.7 1.5e-36 gi|126273826|ref|XP_001370515.1| PREDICTED: simila ( 362) 748 158.5 2.3e-36 gi|56377975|dbj|BAD74165.1| hyaluronan proteoglyca ( 359) 747 158.3 2.6e-36 gi|47228555|emb|CAG05375.1| unnamed protein produc ( 319) 746 158.0 2.7e-36 gi|148745013|gb|AAI42410.1| HAPLN3 protein [Bos ta ( 360) 743 157.5 4.5e-36 gi|73951441|ref|XP_851468.1| PREDICTED: similar to ( 362) 738 156.5 9e-36 gi|28277320|gb|AAH46259.1| MGC53495 protein [Xenop ( 359) 733 155.5 1.8e-35 gi|47605665|sp|Q80WM5.2|HPLN3_MOUSE RecName: Full= ( 359) 729 154.7 3.1e-35 gi|194039626|ref|XP_001925657.1| PREDICTED: simila ( 360) 728 154.5 3.6e-35 gi|50417764|gb|AAH78043.1| LOC446245 protein [Xeno ( 394) 728 154.5 3.8e-35 gi|84569921|gb|AAI10475.1| Hyaluronan and proteogl ( 359) 727 154.3 4.1e-35 gi|80477845|gb|AAI08852.1| Unknown (protein for MG ( 359) 727 154.3 4.1e-35 gi|30349289|gb|AAP22049.1| hyaluronan and proteogl ( 359) 727 154.3 4.1e-35 gi|171847130|gb|AAI61517.1| Unknown (protein for M ( 277) 723 153.4 5.9e-35 gi|89269891|emb|CAJ83435.1| hyaluronan and proteog ( 359) 723 153.5 7.1e-35 gi|60552295|gb|AAH91610.1| Usp12 protein [Xenopus ( 383) 723 153.5 7.4e-35 gi|194206305|ref|XP_001916615.1| PREDICTED: simila ( 359) 717 152.3 1.6e-34 gi|109082296|ref|XP_001090582.1| PREDICTED: simila ( 360) 708 150.5 5.6e-34 gi|94732632|emb|CAK11227.1| novel protein similar ( 336) 707 150.3 6.2e-34 >>gi|47605684|sp|Q86UW8.1|HPLN4_HUMAN RecName: Full=Hyal (402 aa) initn: 2874 init1: 2874 opt: 2874 Z-score: 3096.0 bits: 581.8 E(): 9.6e-164 Smith-Waterman score: 2874; 100.000% identity (100.000% similar) in 402 aa overlap (11-412:1-402) 10 20 30 40 50 60 KIAA19 GPLGGGRAGKMVCARAALGPGALWAAAWGVLLLTAPAGAQRGRKKVVHVLEGESGSVVVQ :::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 MVCARAALGPGALWAAAWGVLLLTAPAGAQRGRKKVVHVLEGESGSVVVQ 10 20 30 40 50 70 80 90 100 110 120 KIAA19 TAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRAFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 TAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRAFG 60 70 80 90 100 110 130 140 150 160 170 180 KIAA19 SYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYHPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 SYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYHPR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA19 GGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPREPC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 GGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPREPC 180 190 200 210 220 230 250 260 270 280 290 300 KIAA19 GGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSGAA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 GGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSGAA 240 250 260 270 280 290 310 320 330 340 350 360 KIAA19 RACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVRSLG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 RACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVRSLG 300 310 320 330 340 350 370 380 390 400 410 KIAA19 FPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLHV :::::::::::::::::::::::::::::::::::::::::::::::::::: gi|476 FPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLHV 360 370 380 390 400 >>gi|109124008|ref|XP_001115151.1| PREDICTED: similar to (402 aa) initn: 3063 init1: 2840 opt: 2840 Z-score: 3059.4 bits: 575.0 E(): 1e-161 Smith-Waterman score: 2840; 98.756% identity (99.502% similar) in 402 aa overlap (11-412:1-402) 10 20 30 40 50 60 KIAA19 GPLGGGRAGKMVCARAALGPGALWAAAWGVLLLTAPAGAQRGRKKVVHVLEGESGSVVVQ :::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 MVCARAALGPGALWAAAWGVLLLTAPAGAQRGRKKVVHVLEGESGSVVVQ 10 20 30 40 50 70 80 90 100 110 120 KIAA19 TAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRAFG :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 TAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRAFG 60 70 80 90 100 110 130 140 150 160 170 180 KIAA19 SYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYHPR :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 SYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYHPR 120 130 140 150 160 170 190 200 210 220 230 240 KIAA19 GGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPREPC :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPREPC 180 190 200 210 220 230 250 260 270 280 290 300 KIAA19 GGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSGAA ::::::::.: :::::::.::::::::::::::::::::::::::::::::::::::::: gi|109 GGLGGTGSTGDGGDANGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSGAA 240 250 260 270 280 290 310 320 330 340 350 360 KIAA19 RACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVRSLG :::::::::::::::::::::::::::::::::::::::::::::: ::::::::::::: gi|109 RACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRMRCGGRRPGVRSLG 300 310 320 330 340 350 370 380 390 400 410 KIAA19 FPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLHV ::::::::::::::::::::::::::::::::::::::::::::::::::.: gi|109 FPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLRV 360 370 380 390 400 >>gi|109124010|ref|XP_001115139.1| PREDICTED: similar to (437 aa) initn: 3056 init1: 2833 opt: 2833 Z-score: 3051.4 bits: 573.6 E(): 2.9e-161 Smith-Waterman score: 2833; 98.753% identity (99.501% similar) in 401 aa overlap (12-412:37-437) 10 20 30 40 KIAA19 GPLGGGRAGKMVCARAALGPGALWAAAWGVLLLTAPAGAQR :::::::::::::::::::::::::::::: gi|109 LAVGKAGPGGSQASERPRLGAGLSPVPVPQVCARAALGPGALWAAAWGVLLLTAPAGAQR 10 20 30 40 50 60 50 60 70 80 90 100 KIAA19 GRKKVVHVLEGESGSVVVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVD :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 GRKKVVHVLEGESGSVVVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVD 70 80 90 100 110 120 110 120 130 140 150 160 KIAA19 PLAFTDVFVALGPQHRAFGSYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELED :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PLAFTDVFVALGPQHRAFGSYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELED 130 140 150 160 170 180 170 180 190 200 210 220 KIAA19 DAGMVKLDLEGVVFPYHPRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNA :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 DAGMVKLDLEGVVFPYHPRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNA 190 200 210 220 230 240 230 240 250 260 270 280 KIAA19 GWLRDGSVQYPVNRPREPCGGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNL :::::::::::::::::::::::::::.: :::::::.:::::::::::::::::::::: gi|109 GWLRDGSVQYPVNRPREPCGGLGGTGSTGDGGDANGGVRNYGYRHNAEERYDAFCFTSNL 250 260 270 280 290 300 290 300 310 320 330 340 KIAA19 PGRVFFLKPLRPVPFSGAARACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYP :::::::::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 PGRVFFLKPLRPVPFSGAARACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYP 310 320 330 340 350 360 350 360 370 380 390 400 KIAA19 IVNPRARCGGRRPGVRSLGFPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGA ::::: :::::::::::::::::::::::::::::::::::::::::::::::::::::: gi|109 IVNPRMRCGGRRPGVRSLGFPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGA 370 380 390 400 410 420 410 KIAA19 RDPAAWTPLHV :::::::::.: gi|109 RDPAAWTPLRV 430 >>gi|148696832|gb|EDL28779.1| hyaluronan and proteoglyca (413 aa) initn: 2613 init1: 1428 opt: 2602 Z-score: 2803.2 bits: 527.6 E(): 1.9e-147 Smith-Waterman score: 2602; 90.370% identity (96.543% similar) in 405 aa overlap (10-412:13-413) 10 20 30 40 50 KIAA19 GPLGGGRAGKMVCARAALGPGALWAAAWGVLLLTAP--AGAQRGRKKVVHVLEGESG .:.:: .::: ::::.:::.:::. : ::::::::::::::::::: gi|148 GKRTGRSARATTRMACAPGALGHRALWAVAWGLLLLV-PVLAGAQRGRKKVVHVLEGESG 10 20 30 40 50 60 70 80 90 100 110 KIAA19 SVVVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQ ::::::::::::::::::::::::::::::::::::::::::::::::::.::::::::: gi|148 SVVVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQ 60 70 80 90 100 110 120 130 140 150 160 170 KIAA19 HRAFGSYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVF ::::: ::::::::.::::::::::::::::::::::::::::::::.:::::::::::: gi|148 HRAFGPYRGRAELQNDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVF 120 130 140 150 160 170 180 190 200 210 220 230 KIAA19 PYHPRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNR ::::::::::.::.::::::::::::::::::::::::::::::::::::::::::::.. gi|148 PYHPRGGRYKMTFVEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSH 180 190 200 210 220 230 240 250 260 270 280 290 KIAA19 PREPCGGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVP ::::: ::::.:.:: .:::.::::::::::::::::::::::::::::::::::: gi|148 AREPCG---GTGSTGAGGGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVA 240 250 260 270 280 290 300 310 320 330 340 350 KIAA19 FSGAARACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPG ..::.::::::::.:::::::::::::::::::::::::::::::::::::.:::: ::: gi|148 LAGAVRACAARGATVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPG 300 310 320 330 340 350 360 370 380 390 400 410 KIAA19 VRSLGFPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLHV :::::::::.:::::::::::::::::::::::::::::::::::.:::::::::.: gi|148 VRSLGFPDASRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV 360 370 380 390 400 410 >>gi|47605664|sp|Q80WM4.2|HPLN4_MOUSE RecName: Full=Hyal (400 aa) initn: 2613 init1: 1428 opt: 2599 Z-score: 2800.1 bits: 527.0 E(): 2.9e-147 Smith-Waterman score: 2599; 90.594% identity (96.535% similar) in 404 aa overlap (11-412:1-400) 10 20 30 40 50 KIAA19 GPLGGGRAGKMVCARAALGPGALWAAAWGVLLLTAP--AGAQRGRKKVVHVLEGESGSVV :.:: .::: ::::.:::.:::. : :::::::::::::::::::::: gi|476 MACAPGALGHRALWAVAWGLLLLV-PVLAGAQRGRKKVVHVLEGESGSVV 10 20 30 40 60 70 80 90 100 110 KIAA19 VQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRA :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|476 VQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRA 50 60 70 80 90 100 120 130 140 150 160 170 KIAA19 FGSYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYH :: ::::::::.::::::::::::::::::::::::::::::::.::::::::::::::: gi|476 FGPYRGRAELQNDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYH 110 120 130 140 150 160 180 190 200 210 220 230 KIAA19 PRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPRE :::::::.::.::::::::::::::::::::::::::::::::::::::::::::.. :: gi|476 PRGGRYKMTFVEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHARE 170 180 190 200 210 220 240 250 260 270 280 290 KIAA19 PCGGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSG :::: :::.:.:: .:::.::::::::::::::::::::::::::::::::::: ..: gi|476 PCGG---TGSTGAGGGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAG 230 240 250 260 270 280 300 310 320 330 340 350 KIAA19 AARACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVRS :.::::::::.:::::::::::::::::::::::::::::::::::::.:::: :::::: gi|476 AVRACAARGATVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRS 290 300 310 320 330 340 360 370 380 390 400 410 KIAA19 LGFPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLHV ::::::.:::::::::::::::::::::::::::::::::::.:::::::::.: gi|476 LGFPDASRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV 350 360 370 380 390 400 >>gi|30349291|gb|AAP22050.1| hyaluronan and proteoglycan (400 aa) initn: 2606 init1: 1421 opt: 2592 Z-score: 2792.6 bits: 525.6 E(): 7.6e-147 Smith-Waterman score: 2592; 90.347% identity (96.287% similar) in 404 aa overlap (11-412:1-400) 10 20 30 40 50 KIAA19 GPLGGGRAGKMVCARAALGPGALWAAAWGVLLLTAP--AGAQRGRKKVVHVLEGESGSVV :.:: .::: ::::.:::.:::. : :::::::::::::::::::::: gi|303 MACAPGALGHRALWAVAWGLLLLV-PVLAGAQRGRKKVVHVLEGESGSVV 10 20 30 40 60 70 80 90 100 110 KIAA19 VQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRA :::::::::::::::::::::::::: ::::::::::::::::::::.:::::::::::: gi|303 VQTAPGQVVSHRGGTIVLPCRYHYEADAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRA 50 60 70 80 90 100 120 130 140 150 160 170 KIAA19 FGSYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYH :: ::::::::.::::::::::::::::::::::::::::::::.::::::::::::::: gi|303 FGPYRGRAELQNDGPGDASLVLRNVTLQDYGRYECEVTNELEDDVGMVKLDLEGVVFPYH 110 120 130 140 150 160 180 190 200 210 220 230 KIAA19 PRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPRE :::::::.::.::::::::::::::::::::::::::::::::::::::::::::.. :: gi|303 PRGGRYKMTFVEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVSHARE 170 180 190 200 210 220 240 250 260 270 280 290 KIAA19 PCGGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSG :::: :::.:.:: .:::.::::::::::::::::::::::::::::::::::: ..: gi|303 PCGG---TGSTGAGGGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAG 230 240 250 260 270 280 300 310 320 330 340 350 KIAA19 AARACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVRS :.::::::::.:::::::::::::::::::::::::::::::::::::.:::: :::::: gi|303 AVRACAARGATVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRS 290 300 310 320 330 340 360 370 380 390 400 410 KIAA19 LGFPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLHV ::::::.:::::::::::::::::::::::::::::::::::.:::::::::.: gi|303 LGFPDASRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV 350 360 370 380 390 400 >>gi|149035980|gb|EDL90646.1| hyaluronan and proteoglyca (400 aa) initn: 2596 init1: 1415 opt: 2590 Z-score: 2790.5 bits: 525.2 E(): 1e-146 Smith-Waterman score: 2590; 90.347% identity (96.040% similar) in 404 aa overlap (11-412:1-400) 10 20 30 40 50 KIAA19 GPLGGGRAGKMVCARAALGPGALWAAAWGVLLLTAP--AGAQRGRKKVVHVLEGESGSVV :.:: .::: ::::.:::.:::. : :::::::::::::::::::::: gi|149 MACAPGALGHRALWAVAWGLLLLV-PVLAGAQRGRKKVVHVLEGESGSVV 10 20 30 40 60 70 80 90 100 110 KIAA19 VQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRA :::::::::::::::::::::::::::::::::::::::::::::::.:::::::::::: gi|149 VQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFADVFVALGPQHRA 50 60 70 80 90 100 120 130 140 150 160 170 KIAA19 FGSYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYH :: ::::::::.:::::::::::::::::::::::::::::::::::::::::::::::: gi|149 FGPYRGRAELQNDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYH 110 120 130 140 150 160 180 190 200 210 220 230 KIAA19 PRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPRE :::::::.:::::::::::::::::::::::.:::::::::::::::::::::::.. :: gi|149 PRGGRYKMTFAEAQRACAEQDGILASAEQLHTAWRDGLDWCNAGWLRDGSVQYPVSQARE 170 180 190 200 210 220 240 250 260 270 280 290 KIAA19 PCGGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSG ::: .:: :.:: .:::.::::::::::::::::::::::::::::::::::: ..: gi|149 ACGG---SGSPGAGGGTNGGVRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVALAG 230 240 250 260 270 280 300 310 320 330 340 350 KIAA19 AARACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVRS :.::::::::.:::::::::::::::::::::::::::::::::::::.:::: :::::: gi|149 AVRACAARGATVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRTRCGGPRPGVRS 290 300 310 320 330 340 360 370 380 390 400 410 KIAA19 LGFPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLHV ::::::.:::::::::::::::::::::::::::::::::::.:::::::::.: gi|149 LGFPDASRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGSRDPAAWTPLRV 350 360 370 380 390 400 >>gi|126323426|ref|XP_001365936.1| PREDICTED: similar to (395 aa) initn: 1971 init1: 1208 opt: 1246 Z-score: 1344.5 bits: 257.7 E(): 3.5e-66 Smith-Waterman score: 2000; 73.385% identity (85.530% similar) in 387 aa overlap (28-412:29-395) 10 20 30 40 50 KIAA19 GPLGGGRAGKMVCARAALGPGALWAAAWGVLLLTAPA--GAQRGRKKVVHVLEGESGSV : .:...: : :..:::::.::::: :::.: gi|126 MDMSLGFICLQPNLQGMGPFCQPVGIIIWILLVFAASALGGSDRGRKKIVHVLEDESGAV 10 20 30 40 50 60 60 70 80 90 100 110 KIAA19 VVQTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHR :::::::.::.::::::::::::::. .:: .: .:::::::.::::: :::::.: ..: gi|126 VVQTAPGKVVTHRGGTIVLPCRYHYDISAHDEDEIRLKWTKVTDPLAFRDVFVAMGKERR 70 80 90 100 110 120 120 130 140 150 160 170 KIAA19 AFGSYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPY ::::::::. :: ::::::::..::::::::::::::::::::::::::.::::::.::: gi|126 AFGSYRGRTSLQEDGPGDASLIIRNVTLQDYGRYECEVTNELEDDAGMVSLDLEGVIFPY 130 140 150 160 170 180 180 190 200 210 220 230 KIAA19 HPRGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPR ::: ::: ::. ::::::::::::::: ::::::::.::::::::::.::::::::..:: gi|126 HPRLGRYTLTYPEAQRACAEQDGILASYEQLHAAWREGLDWCNAGWLQDGSVQYPVGQPR 190 200 210 220 230 240 240 250 260 270 280 290 KIAA19 EPCGGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFS : :: .. :.:::::::. .:::::::::::: ..:::::: : : : gi|126 EECGRR----------ESPVGVRNYGYRHKEDERYDAFCFTSNLQSQVFFLKPYRKVSFP 250 260 270 280 290 300 310 320 330 340 350 KIAA19 GAARACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVR :.::::. ::::::::::.::::::::::: ::::.:::.:::::::::::::.::::: gi|126 EAVRACAGSGAAVAKVGQLYAAWKLQLLDRCEAGWLGDGSVRYPIVNPRARCGGQRPGVR 300 310 320 330 340 350 360 370 380 390 400 410 KIAA19 SLGFPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLHV .::::: .::::::::::::. ::. . ::::: :::.:: :::: gi|126 NLGFPDKKHRLFGVYCYRAPGSRDPGAARWGWGW----------RDPSAWRPLHV 360 370 380 390 >>gi|209155810|gb|ACI34137.1| Hyaluronan and proteoglyca (390 aa) initn: 1593 init1: 1022 opt: 1024 Z-score: 1105.7 bits: 213.5 E(): 6.9e-53 Smith-Waterman score: 1589; 63.401% identity (83.862% similar) in 347 aa overlap (30-375:20-356) 10 20 30 40 50 KIAA19 GPLGGGRAGKMVCARAALGPGALWAAAWGVLLLTA-PAGAQRGRKKVVHVLEGESGSVVV :: .:. :: :..::.::::::: ..:.:.: gi|209 MLSSQPLFLGTVTCLVLTFVLSVTSLPADAEKGRRKVVHVLEDDTGAVIV 10 20 30 40 50 60 70 80 90 100 110 KIAA19 QTAPGQVVSHRGGTIVLPCRYHYEAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRAF :::::.:..::::.:.::::::.: . . .:.:::::.: :.: ::::::: :.:.: gi|209 QTAPGKVITHRGGSITLPCRYHHEPESSDPNRIRIKWTKVTDALVFEDVFVALGLQQRVF 60 70 80 90 100 110 120 130 140 150 160 170 KIAA19 GSYRGRAELQGDGPGDASLVLRNVTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYHP : ::::. :. .::::::....::::.:::::::::::..:::.:.:.::::::::::.: gi|209 GLYRGRVSLEQNGPGDASVIIHNVTLEDYGRYECEVTNDMEDDTGFVNLDLEGVVFPYYP 120 130 140 150 160 170 180 190 200 210 220 230 KIAA19 RGGRYKLTFAEAQRACAEQDGILASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPREP : :::::.. .:. .: :::.:::: ::: :: .::::::::::.:::::::...::. gi|209 RVGRYKLNYHQAEDVCKEQDAILASHAQLHKAWLEGLDWCNAGWLEDGSVQYPISHPRDQ 180 190 200 210 220 230 240 250 260 270 280 290 KIAA19 CGGLGGTGSAGGGGDANGGLRNYGYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSGA :: :. .:.:::::::. .:::::::::::: :.:.::: .. : .. : gi|209 CGR----------KDTPAGVRNYGYRHKEDERYDAFCFTSNLNGKVYFLKRFKKVNYAEA 240 250 260 270 280 300 310 320 330 340 350 KIAA19 ARACAARGAAVAKVGQLFAAWKLQLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVRSL ..:: .. :::::::.::::.:::::: :::: :.: ::::::::.:::: .:::: : gi|209 VKACLRDSSMVAKVGQLYAAWKIQLLDRCEAGWLEDASIRYPIVNPRTRCGGPQPGVRHL 290 300 310 320 330 340 360 370 380 390 400 410 KIAA19 GFPDATRRLFGVYCYRAPGAPDPAPGGWGWGWAGGGGWAGGARDPAAWTPLHV :::: ::.::::.: gi|209 GFPDLKFRLYGVYCFRKNQENVNVDVVKLTQRQGKSSKDIPMNTTSTRTI 350 360 370 380 390 >>gi|94733594|emb|CAK05354.1| novel protein similar to v (344 aa) initn: 1502 init1: 913 opt: 913 Z-score: 987.0 bits: 191.3 E(): 2.8e-46 Smith-Waterman score: 1495; 63.777% identity (82.353% similar) in 323 aa overlap (53-375:7-319) 30 40 50 60 70 80 KIAA19 LWAAAWGVLLLTAPAGAQRGRKKVVHVLEGESGSVVVQTAPGQVVSHRGGTIVLPCRYHY ..:.:.::::::.::.::::::.::::::. gi|947 MFNGKDDTGAVIVQTAPGKVVTHRGGTITLPCRYHH 10 20 30 90 100 110 120 130 140 KIAA19 EAAAHGHDGVRLKWTKVVDPLAFTDVFVALGPQHRAFGSYRGRAELQGDGPGDASLVLRN : . .:.::::: : . : ::::::: :..:::::. :. :. ::::::....: gi|947 EPEDIDPNRIRIKWTKVSDAFQFEDVFVALGRQQKAFGSYQERVSLEQAGPGDASVIIHN 40 50 60 70 80 90 150 160 170 180 190 200 KIAA19 VTLQDYGRYECEVTNELEDDAGMVKLDLEGVVFPYHPRGGRYKLTFAEAQRACAEQDGIL .::.:::::::::::..:::.:.:.::::::::::.: .:::::.. .:...: :::.:: gi|947 ITLEDYGRYECEVTNDMEDDTGFVNLDLEGVVFPYYPPSGRYKLNYHQAEEVCREQDAIL 100 110 120 130 140 150 210 220 230 240 250 260 KIAA19 ASAEQLHAAWRDGLDWCNAGWLRDGSVQYPVNRPREPCGGLGGTGSAGGGGDANGGLRNY :: ::: :: .::::::::::.:::::::...::. :: :. :.::: gi|947 ASHPQLHKAWLEGLDWCNAGWLEDGSVQYPISHPRDQCGR----------KDSPPGVRNY 160 170 180 190 200 270 280 290 300 310 320 KIAA19 GYRHNAEERYDAFCFTSNLPGRVFFLKPLRPVPFSGAARACAARGAAVAKVGQLFAAWKL ::::. .:::::::::::: :::.::: .. : . :..:: :: .::::::.::::. gi|947 GYRHKDDERYDAFCFTSNLNGRVYFLKRFKKVNYLEAVKACQRDGAFIAKVGQLYAAWKI 210 220 230 240 250 260 330 340 350 360 370 380 KIAA19 QLLDRCTAGWLADGSARYPIVNPRARCGGRRPGVRSLGFPDATRRLFGVYCYRAPGAPDP :::::: :::. ::: ::::::::::::: ::::.::::: ::.::::.: gi|947 QLLDRCEAGWVEDGSIRYPIVNPRARCGGPDPGVRNLGFPDKKFRLYGVYCFRKNTDIQS 270 280 290 300 310 320 390 400 410 KIAA19 APGGWGWGWAGGGGWAGGARDPAAWTPLHV gi|947 TQTPTETTSKMANSTRSI 330 340 412 residues in 1 query sequences 2693465022 residues in 7827732 library sequences Tcomplib [34.26] (8 proc) start: Fri Mar 6 03:46:43 2009 done: Fri Mar 6 03:51:25 2009 Total Scan time: 1495.920 Total Display time: 0.130 Function used was FASTA [version 34.26.5 April 26, 2007]