hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-16174578/chunk_1/iprscan-20080502-16174578.nocrc
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Query sequence: KIAA1910
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model     Description                                   Score    E-value  N 
--------  -----------                                   -----    ------- ---
SM00369                                                 142.3    5.1e-38  11
SM00082                                                  62.2    6.6e-14   2

Parsed for domains:
Model     Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------  ------- ----- -----    ----- -----      -----  -------
SM00369     1/11    145   168 ..     1    24 []     3.4  1.6e+02
SM00369     2/11    169   192 ..     1    24 []    11.6       16
SM00369     3/11    193   216 ..     1    24 []    15.5      5.4
SM00369     4/11    217   240 ..     1    24 []    26.7   0.0033
SM00369     5/11    244   264 ..     1    24 []     2.2  2.2e+02
SM00082     1/2     276   326 ..     1    55 []    32.8  4.7e-05
SM00369     6/11    438   461 ..     1    24 []    10.5       22
SM00369     7/11    462   485 ..     1    24 []    11.8       15
SM00369     8/11    486   509 ..     1    24 []     9.2       31
SM00369     9/11    510   533 ..     1    24 []    19.2     0.58
SM00369    10/11    534   557 ..     1    24 []    32.1  7.3e-05
SM00369    11/11    558   581 ..     1    24 []     0.1    4e+02
SM00082     2/2     593   643 ..     1    55 []    29.4   0.0005

Alignments of top-scoring domains:
SM00369: domain 1 of 11, from 145 to 168: score 3.4, E = 1.6e+02
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                        n  +L+ +nN L ++ pgaF g   
    KIAA1910   145    FYNAVSLHMENNGLHEIVPGAFLG    168  

SM00369: domain 2 of 11, from 169 to 192: score 11.6, E = 16
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L   ++L+ +nN+++s   ++F g   
    KIAA1910   169    LQLVKRLHINNNKIKSFRKQTFLG    192  

SM00369: domain 3 of 11, from 193 to 216: score 15.5, E = 5.4
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L  L+ L  ++N L+ + pgaFq+   
    KIAA1910   193    LDDLEYLQADFNLLRDIDPGAFQD    216  

SM00369: domain 4 of 11, from 217 to 240: score 26.7, E = 0.0033
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L +L++L L++N +++LP+++Fq    
    KIAA1910   217    LNKLEVLILNDNLISTLPANVFQY    240  

SM00369: domain 5 of 11, from 244 to 264: score 2.2, E = 2.2e+02
                   *->LpnLreLdLsnNqLtsLP.pgaFqg<-*
                          ++LdL +N+L++LP +++++    
    KIAA1910   244    ----THLDLRGNRLKTLPyEEVLEQ    264  

SM00082: domain 1 of 2, from 276 to 326: score 32.8, E = 4.7e-05
                   *->NPfnCDCeLrwLlrwleaqnnealqdpvs..slrCasPeslrGqpll
                      NP++C+C+L+ L++wle+     ++++++ ++++C+ P +l+G + l
    KIAA1910   276    NPWDCTCDLLSLKEWLEN-----IPKNALigRVVCEAPTRLQG-KDL 316  

                   lllpsefsCp<-*
                     +   + Cp   
    KIAA1910   317 NETTEQDLCP    326  

SM00369: domain 6 of 11, from 438 to 461: score 10.5, E = 22
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L+n +eL L +N++ s+    F +   
    KIAA1910   438    LSNVQELFLRDNKIHSIRKSHFVD    461  

SM00369: domain 7 of 11, from 462 to 485: score 11.8, E = 15
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                        nL  LdL+nN++ ++ +++F +   
    KIAA1910   462    YKNLILLDLGNNNIATVENNTFKN    485  

SM00369: domain 8 of 11, from 486 to 509: score 9.2, E = 31
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L  Lr L+ ++N L +L ++ F+g   
    KIAA1910   486    LLDLRWLYMDSNYLDTLSREKFAG    509  

SM00369: domain 9 of 11, from 510 to 533: score 19.2, E = 0.58
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      L nL+ L+ ++N+++ + pg+F+    
    KIAA1910   510    LQNLEYLNVEYNAIQLILPGTFNA    533  

SM00369: domain 10 of 11, from 534 to 557: score 32.1, E = 7.3e-05
                   *->LpnLreLdLsnNqLtsLPpgaFqg<-*
                      +p+Lr L L+nN L+sLP ++F+g   
    KIAA1910   534    MPKLRILILNNNLLRSLPVDVFAG    557  

SM00369: domain 11 of 11, from 558 to 581: score 0.1, E = 4e+02
                   *->LpnLreLdLsnNqLtsLP.pgaFqg<-*
                       ++L +L+L+nN +  LP +g+++    
    KIAA1910   558    -VSLSKLSLHNNYFMYLPvAGVLDQ    581  

SM00082: domain 2 of 2, from 593 to 643: score 29.4, E = 0.0005
                   *->NPfnCDCeLrwLlrwleaqnnealqdpvsslrCasPeslrGqpllll
                      NP++C+C++ ++++w e + +e+l+    +l+C++P  +   + + l
    KIAA1910   593    NPWECSCTIVPFKQWAERLGSEVLMS---DLKCETPVNFFR-KDFML 635  

                   lpsefsCp<-*
                   l  + +Cp   
    KIAA1910   636 LSNDEICP    643  

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