hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-15364197/chunk_1/iprscan-20080502-15364197.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1886
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF02891.10.ls MIZ/SP-RING zinc finger                        116.2    8.7e-32   1
PF02891.10.fs MIZ/SP-RING zinc finger                        114.3    3.3e-31   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF02891.10.fs   1/1     331   380 ..     1    54 []   114.3  3.3e-31
PF02891.10.ls   1/1     331   380 ..     1    54 []   116.2  8.7e-32

Alignments of top-scoring domains:
PF02891.10.fs: domain 1 of 1, from 331 to 380: score 114.3, E = 3.3e-31
                   *->vsLkCPiSfsRIsiPvRgrfCkHlQCFDlksfLesneqtptFNmRWn
                      vsLkCPi+f+RI +P+Rg+ C+H+QCFDl+s+L++n++++t    W+
    KIAA1886   331    VSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGT----WR 373  

                   CPvCskp<-*
                   CPvC+k    
    KIAA1886   374 CPVCNKT    380  

PF02891.10.ls: domain 1 of 1, from 331 to 380: score 116.2, E = 8.7e-32
                   *->vsLkCPiSfsRIsiPvRgrfCkHlQCFDlksfLesneqtptFNmRWn
                      vsLkCPi+f+RI +P+Rg+ C+H+QCFDl+s+L++n++++t    W+
    KIAA1886   331    VSLKCPITFRRIQLPARGHDCRHIQCFDLESYLQLNCERGT----WR 373  

                   CPvCskp<-*
                   CPvC+k    
    KIAA1886   374 CPVCNKT    380  

//