hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-15245286/chunk_1/iprscan-20080502-15245286.nocrc
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Query sequence: KIAA1880
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00225                                                  99.1    5.2e-25   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00225    1/1      66   167 ..     1   114 []    99.1  5.2e-25

Alignments of top-scoring domains:
SM00225: domain 1 of 1, from 66 to 167: score 99.1, E = 5.2e-25
                   *->cDvtlvvggdlggdnaegkkfhasqHkavLaacrrdSpyFkalfes.
                       Dvt+vv+          k+f+a  H+++Laa+   + yF+al++++
    KIAA1880    66    GDVTFVVEK---------KRFPA--HRVILAAR---CQYFRALLYGg 98   

                   .........ieldDeallievspeaFralLnflYt.kldlpeedvenvee
                    ++++++ +i+l+D       ++eaF +lL+++Yt++  l++e++e +++
    KIAA1880    99 mresqpeaeIPLQD------TTAEAFTMLLKYIYTgRATLTDEKEEVLLD 142  

                   lLelAdfldSYGqip.lvelCeefllknl<-*
                   +L lA+++    + p+l +   e+l++ l   
    KIAA1880   143 FLSLAHKY----GFPeLEDSTSEYLCTIL    167  

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