hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-14021316/chunk_1/iprscan-20080502-14021316.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1831
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00698                                                 141.5    8.7e-38   6

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00698    1/6      48    69 ..     1    22 []    12.5      1.6
SM00698    2/6      94   115 ..     1    22 []    20.0     0.16
SM00698    3/6     139   160 ..     1    22 []    22.8    0.046
SM00698    4/6     162   183 ..     1    22 []    29.3  0.00052
SM00698    5/6     315   336 ..     1    22 []    23.6    0.028
SM00698    6/6     338   359 ..     1    22 []    33.3  3.3e-05

Alignments of top-scoring domains:
SM00698: domain 1 of 6, from 48 to 69: score 12.5, E = 1.6
                   *->drYeGeWvnGkrHGkGvytyad<-*
                       +Y G W +G+ HG+Gv t +    
    KIAA1831    48    GCYVGGWEAGRAHGYGVCTGPG    69   

SM00698: domain 2 of 6, from 94 to 115: score 20.0, E = 0.16
                   *->drYeGeWvnGkrHGkGvytyad<-*
                        Y+G+W+ Gkr G Gv + +    
    KIAA1831    94    HSYQGHWQQGKREGLGVERKSR    115  

SM00698: domain 3 of 6, from 139 to 160: score 22.8, E = 0.046
                   *->drYeGeWvnGkrHGkGvytyad<-*
                       rY G W++G ++G+G+ ty+d   
    KIAA1831   139    LRYAGLWKDGFQDGYGTETYSD    160  

SM00698: domain 4 of 6, from 162 to 183: score 29.3, E = 0.00052
                   *->drYeGeWvnGkrHGkGvytyad<-*
                       +Y+G+W++GkrHG+Gv +      
    KIAA1831   162    GTYQGQWQAGKRHGYGVRQSVP    183  

SM00698: domain 5 of 6, from 315 to 336: score 23.6, E = 0.028
                   *->drYeGeWvnGkrHGkGvytyad<-*
                       +Y GeW++++r+G+Gv ++++   
    KIAA1831   315    EVYAGEWRADRRSGFGVSQRSN    336  

SM00698: domain 6 of 6, from 338 to 359: score 33.3, E = 3.3e-05
                   *->drYeGeWvnGkrHGkGvytyad<-*
                       rYeGeW  ++rHG+G+ t++d   
    KIAA1831   338    LRYEGEWLGNRRHGYGRTTRPD    359  

//