hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13312702/chunk_1/iprscan-20080502-13312702.nocrc
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Query sequence: KIAA1813
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF06818.5.fs Fez1                                           436.5   5.6e-137   2
PF06818.5.ls Fez1                                           437.4   1.8e-128   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF06818.5.fs   2/2     443   641 ..     1   220 []   435.4 1.2e-136
PF06818.5.ls   1/1     443   641 ..     1   220 []   437.4 1.8e-128

Alignments of top-scoring domains:
PF06818.5.fs: domain 2 of 2, from 443 to 641: score 435.4, E = 1.2e-136
                   *->TkWEVCQKsGEISLLKQQLKESQAEVnQKaSEilaLraqLrdtRAqL
                      TkWEVCQKsGEISLLKQQLKESQAE++QK+SE++aLr++Lr++RA+L
    KIAA1813   443    TKWEVCQKSGEISLLKQQLKESQAELVQKGSELVALRVALREARATL 489  

                   rekEerllgLrdAlrtKeLELEvCEgELqRklqEaallPvDLvEPrEkvg
                   r++E+r++gL++A+r++eLELE+C++ELqR++qEa++l       rEk+g
    KIAA1813   490 RVSEGRARGLQEAARARELELEACSQELQRHRQEAEQL-------REKAG 532  

                   slEadeaklReqadaaaaadvRmRqDAqGrPelllesdeAkvdqeGeGgt
                   +l+a++a+lRe+++++a+ad          P+ll+esdeAkv+++++G++
    KIAA1813   533 QLDAEAAGLREPPVPPATAD----------PFLLAESDEAKVQRAAAGVG 572  

                   eAqlreLRrelERLRAELreERqrrerQalsFeqERlvWqeEKEkVirYQ
                   ++    LR+++ERLR+EL++ER+r+e+Q++sFe+ERl+Wq+EKE+VirYQ
    KIAA1813   573 GS----LRAQVERLRVELQRERRRGEEQRDSFEGERLAWQAEKEQVIRYQ 618  

                   kQLQlSYveMYqRNQaLEkeLqq<-*
                   kQLQ++Y++MY+RN++LE+eLqq   
    KIAA1813   619 KQLQHNYIQMYRRNRQLEQELQQ    641  

PF06818.5.ls: domain 1 of 1, from 443 to 641: score 437.4, E = 1.8e-128
                   *->TkWEVCQKsGEISLLKQQLKESQAEVnQKaSEilaLraqLrdtRAqL
                      TkWEVCQKsGEISLLKQQLKESQAE++QK+SE++aLr++Lr++RA+L
    KIAA1813   443    TKWEVCQKSGEISLLKQQLKESQAELVQKGSELVALRVALREARATL 489  

                   rekEerllgLrdAlrtKeLELEvCEgELqRklqEaallPvDLvEPrEkvg
                   r++E+r++gL++A+r++eLELE+C++ELqR++qEa++l       rEk+g
    KIAA1813   490 RVSEGRARGLQEAARARELELEACSQELQRHRQEAEQL-------REKAG 532  

                   slEadeaklReqadaaaaadvRmRqDAqGrPelllesdeAkvdqeGeGgt
                   +l+a++a+lRe+++++a+ad          P+ll+esdeAkv+++++G++
    KIAA1813   533 QLDAEAAGLREPPVPPATAD----------PFLLAESDEAKVQRAAAGVG 572  

                   eAqlreLRrelERLRAELreERqrrerQalsFeqERlvWqeEKEkVirYQ
                   ++    LR+++ERLR+EL++ER+r+e+Q++sFe+ERl+Wq+EKE+VirYQ
    KIAA1813   573 GS----LRAQVERLRVELQRERRRGEEQRDSFEGERLAWQAEKEQVIRYQ 618  

                   kQLQlSYveMYqRNQaLEkeLqq<-*
                   kQLQ++Y++MY+RN++LE+eLqq   
    KIAA1813   619 KQLQHNYIQMYRRNRQLEQELQQ    641  

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