hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-13275700/chunk_1/iprscan-20080502-13275700.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1811 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.fs Protein kinase domain 294.0 2.7e-85 1 PF00069.15.ls Protein kinase domain 256.4 5.5e-74 1 PF07714.7.fs Protein tyrosine kinase 55.3 5.8e-16 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.fs 1/1 1 222 [. 31 287 .] 294.0 2.7e-85 PF00069.15.ls 1/1 1 222 [. 1 287 [] 256.4 5.5e-74 PF07714.7.fs 1/1 4 115 .. 37 160 .. 55.3 5.8e-16 Alignments of top-scoring domains: PF00069.15.fs: domain 1 of 1, from 1 to 222: score 294.0, E = 2.7e-85 *->iikkrkekskkdktarrlsEiqilkrLsHpNIvrlidvfedkdhlyl i++++k ++++++ r Ei+ilk + Hp++++l+dv+e+k++lyl KIAA1811 1 IVNREKLSESVLMKVER--EIAILKLIEHPHVLKLHDVYENKKYLYL 45 VlEycegGLrvldLfdylsetrrkgpllfsedeakkialQilrgleYLHs VlE++ gG +Lfdyl +kg+l +++ea+k+++Qi+++l+++Hs KIAA1811 46 VLEHVSGG----ELFDYLV---KKGRL--TPKEARKFFRQIVSALDFCHS 86 ngiiHRDLKPeNILldnngvvdaflKiaDFGlAkklst.sss.lttfvGT +i+HRDLKPeN+Lld+++++ +iaDFG A + +s l t +G+ KIAA1811 87 YSICHRDLKPENLLLDEKNNI----RIADFGMASL--QvGDSlLETSCGS 130 pwYmAPEvllggngygtkvDvWSlGvilyelltGkpPFsgevqdsldqlq p+Y+ PEv++g +++g+++D+WS+Gvil+ ll G +PF+++ + +q KIAA1811 131 PHYACPEVIKGEKYDGRRADMWSCGVILFALLVGALPFDDD-----NLRQ 175 lirkilgpplefdspewdsisrsefrrlpnlseeakdLikkcLnkDPskR l++k++++ ++ + + + +++++L+++++++ P+kR KIAA1811 176 LLEKVKRGVFHMPHFIP---------------PDCQSLLRGMIEVEPEKR 210 ltaeeilqHPwf<-* l+ e+i +HPw KIAA1811 211 LSLEQIQKHPWY 222 PF00069.15.ls: domain 1 of 1, from 1 to 222: score 256.4, E = 5.5e-74 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr i++++k ++++++ r KIAA1811 1 ------------------------------IVNREKLSESVLMKVER 17 lsEiqilkrLsHpNIvrlidvfedkdhlylVlEycegGLrvldLfdylse Ei+ilk + Hp++++l+dv+e+k++lylVlE++ gG +Lfdyl KIAA1811 18 --EIAILKLIEHPHVLKLHDVYENKKYLYLVLEHVSGG----ELFDYLV- 60 trrkgpllfsedeakkialQilrgleYLHsngiiHRDLKPeNILldnngv +kg+l +++ea+k+++Qi+++l+++Hs +i+HRDLKPeN+Lld++++ KIAA1811 61 --KKGRL--TPKEARKFFRQIVSALDFCHSYSICHRDLKPENLLLDEKNN 106 vdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggngygtkvD + +iaDFG A + +s l t +G+p+Y+ PEv++g +++g+++D KIAA1811 107 I----RIADFGMASL--QvGDSlLETSCGSPHYACPEVIKGEKYDGRRAD 150 vWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefdspewdsi +WS+Gvil+ ll G +PF+++ + +ql++k++++ ++ + + + KIAA1811 151 MWSCGVILFALLVGALPFDDD-----NLRQLLEKVKRGVFHMPHFIP--- 192 srsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf<-* +++++L+++++++ P+kRl+ e+i +HPw KIAA1811 193 ------------PDCQSLLRGMIEVEPEKRLSLEQIQKHPWY 222 PF07714.7.fs: domain 1 of 1, from 4 to 115: score 55.3, E = 5.8e-16 *->keigaseeeieredFlrEAsiMkklGdHpNiVrLlGvctkegePggp +e + se+ + + rE++i+k + Hp++++L+ v ++ KIAA1811 4 RE-KLSESV--LMKVEREIAILKLI-EHPHVLKLHDVYEN-KKY--- 42 glyiVtEymegGdLldfLrkhregrpLtlkdLlsfalQiAkGMeYLeskn ly+V+E++ gG L d+L k +++Lt k+ +f +Qi +++++ +s KIAA1811 43 -LYLVLEHVSGGELFDYLVK---KGRLTPKEARKFFRQIVSALDFCHSYS 88 fvHRDLAARNcLVsenlvVKIsDFGLa<-* + HRDL N L++e++ ++I+DFG+a KIAA1811 89 ICHRDLKPENLLLDEKNNIRIADFGMA 115 //