hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-13073668/chunk_1/iprscan-20080502-13073668.nocrc
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Query sequence: KIAA1799
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF00036.22.fs EF hand                                         40.3    6.1e-10   3
PF00036.22.ls EF hand                                         43.1    8.6e-10   3

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF00036.22.fs   1/3     110   138 ..     1    29 []    12.4    0.026
PF00036.22.fs   2/3     146   174 ..     1    29 []    12.1    0.029
PF00036.22.fs   3/3     411   432 ..     1    22 [.    15.8    0.003

Alignments of top-scoring domains:
PF00036.22.fs: domain 1 of 3, from 110 to 138: score 12.4, E = 0.026
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      el + Fk++D++ DG I   ++ ++l+k    
    KIAA1799   110    ELLKSFKQLDVNDDGCILHTDLYKFLTKR    138  

PF00036.22.fs: domain 2 of 3, from 146 to 174: score 12.1, E = 0.029
                   *->elkeaFkefDkDgDGkIsfeEfkaalkkl<-*
                      e++++++++D++ DGk ++  f+++++++   
    KIAA1799   146    EVNAIINLADVNADGKFDYIKFCKLYMTT    174  

PF00036.22.fs: domain 3 of 3, from 411 to 432: score 15.8, E = 0.003
                   *->elkeaFkefDkDgDGkIsfeEf<-*
                       l ++F+++D Dg+G +s+eE+   
    KIAA1799   411    TLSDIFEVIDLDGNGLLSLEEY    432  

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