hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12554619/chunk_1/iprscan-20080502-12554619.nocrc
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Query sequence: KIAA1792
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF08368.2.fs FAST kinase-like protein, subdomain 2          130.5    6.1e-38   1
PF08368.2.ls FAST kinase-like protein, subdomain 2          132.5    1.1e-36   1
PF06743.5.ls FAST kinase-like protein, subdomain 1          111.4    2.4e-30   1
PF06743.5.fs FAST kinase-like protein, subdomain 1          109.5    9.3e-30   1
PF08373.1.ls RAP domain                                      80.6    4.5e-21   1
PF08373.1.fs RAP domain                                      78.7    7.1e-21   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF06743.5.fs   1/1     474   546 ..     1    75 []   109.5  9.3e-30
PF06743.5.ls   1/1     474   546 ..     1    75 []   111.4  2.4e-30
PF08368.2.fs   1/1     553   646 ..     1    95 []   130.5  6.1e-38
PF08368.2.ls   1/1     553   646 ..     1    95 []   132.5  1.1e-36
PF08373.1.fs   1/1     743   802 ..     1    70 []    78.7  7.1e-21
PF08373.1.ls   1/1     743   802 ..     1    70 []    80.6  4.5e-21

Alignments of top-scoring domains:
PF06743.5.fs: domain 1 of 1, from 474 to 546: score 109.5, E = 9.3e-30
                   *->vaalLlpFgrLNYkykPpnkeeFfsklvqkLlreLhtlsqYPeslln
                      va++L++Fg+LNYk  Ppn+eeF+s+l+++++r++++++qYPe+l +
    KIAA1792   474    VAKILWSFGTLNYK--PPNAEEFYSSLISEIHRKMPEFNQYPEHLPT 518  

                   lvwSLclleyfPeellnkVlspdFlqrL<-*
                   ++++L++leyfP+el+ ++lsp+F++     
    KIAA1792   519 CLLGLAFLEYFPVELIDFALSPGFVRLA    546  

PF06743.5.ls: domain 1 of 1, from 474 to 546: score 111.4, E = 2.4e-30
                   *->vaalLlpFgrLNYkykPpnkeeFfsklvqkLlreLhtlsqYPeslln
                      va++L++Fg+LNYk  Ppn+eeF+s+l+++++r++++++qYPe+l +
    KIAA1792   474    VAKILWSFGTLNYK--PPNAEEFYSSLISEIHRKMPEFNQYPEHLPT 518  

                   lvwSLclleyfPeellnkVlspdFlqrL<-*
                   ++++L++leyfP+el+ ++lsp+F++     
    KIAA1792   519 CLLGLAFLEYFPVELIDFALSPGFVRLA    546  

PF08368.2.fs: domain 1 of 1, from 553 to 646: score 130.5, E = 6.1e-38
                   *->rvrkkLlqLnaavkLEcPeYkgplLptryqvpqfpqplpkkrtplDs
                      +++k+L++L+++v +EcP+Y+g++L t++q++++ + l++++++ D+
    KIAA1792   553    DLLKELYTLDGTVGIECPDYRGNRLSTHLQQEGS-ELLWYLAEK-DM 597  

                   ssqkellev.yLLkeLLGgeqyfkhsvttPygytiDfEvvLDkngkpLP<
                   +s++e+le+ +LL+++LGg+qy+kh++++P+++++D+Ev+LD n kpLP 
    KIAA1792   598 NSKPEFLETvFLLETMLGGPQYVKHHMILPHTRSSDLEVQLDVNLKPLP  646  

                   -*
                     
    KIAA1792     -    -    

PF08368.2.ls: domain 1 of 1, from 553 to 646: score 132.5, E = 1.1e-36
                   *->rvrkkLlqLnaavkLEcPeYkgplLptryqvpqfpqplpkkrtplDs
                      +++k+L++L+++v +EcP+Y+g++L t++q++++ + l++++++ D+
    KIAA1792   553    DLLKELYTLDGTVGIECPDYRGNRLSTHLQQEGS-ELLWYLAEK-DM 597  

                   ssqkellev.yLLkeLLGgeqyfkhsvttPygytiDfEvvLDkngkpLP<
                   +s++e+le+ +LL+++LGg+qy+kh++++P+++++D+Ev+LD n kpLP 
    KIAA1792   598 NSKPEFLETvFLLETMLGGPQYVKHHMILPHTRSSDLEVQLDVNLKPLP  646  

                   -*
                     
    KIAA1792     -    -    

PF08373.1.fs: domain 1 of 1, from 743 to 802: score 78.7, E = 7.1e-21
                   *->IeidGpshfyrLinqanskslkydlintgntklKkRlLsalGykVIs
                      +++  ++++++     +s++l      +g++++K+R L+ lGy+V++
    KIAA1792   743    VQFTNRNQYCY-----GSRDL------LGLHNMKRRQLARLGYRVVE 778  

                   IpyyEWnkm.lktelqKkeYlkkk<-*
                   ++y+EW+++  +t+l+K ++l++k   
    KIAA1792   779 LSYWEWLPLlKRTRLEKLAFLHEK    802  

PF08373.1.ls: domain 1 of 1, from 743 to 802: score 80.6, E = 4.5e-21
                   *->IeidGpshfyrLinqanskslkydlintgntklKkRlLsalGykVIs
                      +++  ++++++     +s++l      +g++++K+R L+ lGy+V++
    KIAA1792   743    VQFTNRNQYCY-----GSRDL------LGLHNMKRRQLARLGYRVVE 778  

                   IpyyEWnkm.lktelqKkeYlkkk<-*
                   ++y+EW+++  +t+l+K ++l++k   
    KIAA1792   779 LSYWEWLPLlKRTRLEKLAFLHEK    802  

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