hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-12435750/chunk_1/iprscan-20080502-12435750.nocrc
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Query sequence: KIAA1785
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00248                                                 214.5    9.3e-60   9

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00248    1/9       2    33 ..     1    30 []     1.4  3.1e+03
SM00248    2/9      40    70 ..     1    30 []    30.3  0.00027
SM00248    3/9      82   111 ..     1    30 []    26.1   0.0047
SM00248    4/9     115   144 ..     1    30 []    27.4   0.0019
SM00248    5/9     148   177 ..     1    30 []    38.0  1.3e-06
SM00248    6/9     181   210 ..     1    30 []    27.7   0.0016
SM00248    7/9     213   243 ..     1    30 []    15.1       10
SM00248    8/9     481   523 ..     1    30 []    15.1      9.8
SM00248    9/9     527   556 ..     1    30 []    33.3  3.2e-05

Alignments of top-scoring domains:
SM00248: domain 1 of 9, from 2 to 33: score 1.4, E = 3.1e+03
                   *->dGrTpLHlAaengnlevvklLldkga..dina<-*
                      d +T+   Aa+ g l ++  Ll ++ ++++     
    KIAA1785     2    DLKTAVFNAARDGKLRLLTKLLASKSkeEVSS    33   

SM00248: domain 2 of 9, from 40 to 70: score 30.3, E = 0.00027
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      +G TpL +Aa++g+l++v++Ll+    +i++   
    KIAA1785    40    NGATPLLMAARYGHLDMVEFLLEQCSaSIEV    70   

SM00248: domain 3 of 9, from 82 to 111: score 26.1, E = 0.0047
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G  pL+ A + g+l+vv+ Ll++ga++n    
    KIAA1785    82    EGAPPLWAASAAGHLKVVQSLLNHGASVNN    111  

SM00248: domain 4 of 9, from 115 to 144: score 27.4, E = 0.0019
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       + TpL  A+  g+le+vk+L++++ad+++   
    KIAA1785   115    TNSTPLRAACFDGHLEIVKYLVEHKADLEV    144  

SM00248: domain 5 of 9, from 148 to 177: score 38.0, E = 1.3e-06
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      +G+T+L++ +++g++e++++Ll+kgad+n    
    KIAA1785   148    HGHTCLMISCYKGHKEIAQYLLEKGADVNR    177  

SM00248: domain 6 of 9, from 181 to 210: score 27.7, E = 0.0016
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                       G+T+LH +ae+g+l+++k+Ll + a +++   
    KIAA1785   181    KGNTALHDCAESGSLDIMKMLLMYCAKMEK    210  

SM00248: domain 7 of 9, from 213 to 243: score 15.1, E = 10
                   *->dGrTpLHlAaengnlevvklLldkga.dina<-*
                      +G+TpL  A  +g+ ++v +L  +  ++ ++   
    KIAA1785   213    YGMTPLLSASVTGHTNIVDFLTHHAQtSKTE    243  

SM00248: domain 8 of 9, from 481 to 523: score 15.1, E = 9.8
                   *->dGrTpLHlAaen.............gnlevvklLldkgadina<-*
                      ++++pLHlA+ ++++  ++ +  +  +l v  +L++ gad+n+   
    KIAA1785   481    NNFSPLHLAVDKnttcvgrypvckfPSLQVTAILIECGADVNV    523  

SM00248: domain 9 of 9, from 527 to 556: score 33.3, E = 3.2e-05
                   *->dGrTpLHlAaengnlevvklLldkgadina<-*
                      d+++pLH+Aa n+++++++lL+++ga ++a   
    KIAA1785   527    DDNSPLHIAALNNHPDIMNLLIKSGAHFDA    556  

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