hmmpfam - search one or more sequences against HMM database HMMER 2.3.2 (Oct 2003) Copyright (C) 1992-2003 HHMI/Washington University School of Medicine Freely distributed under the GNU General Public License (GPL) - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - HMM file: /db/iprscan/data/Pfam.bin Sequence file: /db/iprscan/tmp/20080502/iprscan-20080502-11585656/chunk_1/iprscan-20080502-11585656.nocrc - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - Query sequence: KIAA1760 Accession: [none] Description: [none] Scores for sequence family classification (score includes all domains): Model Description Score E-value N -------- ----------- ----- ------- --- PF00069.15.ls Protein kinase domain 213.5 4.5e-61 1 PF00069.15.fs Protein kinase domain 211.6 1.7e-60 1 PF07714.7.fs Protein tyrosine kinase 81.7 1.3e-23 1 PF07714.7.ls Protein tyrosine kinase 77.0 5.4e-20 1 Parsed for domains: Model Domain seq-f seq-t hmm-f hmm-t score E-value -------- ------- ----- ----- ----- ----- ----- ------- PF00069.15.fs 1/1 190 448 .. 1 287 [] 211.6 1.7e-60 PF07714.7.fs 1/1 190 404 .. 1 230 [. 81.7 1.3e-23 PF00069.15.ls 1/1 190 448 .. 1 287 [] 213.5 4.5e-61 PF07714.7.ls 1/1 190 448 .. 1 272 [] 77.0 5.4e-20 Alignments of top-scoring domains: PF00069.15.fs: domain 1 of 1, from 190 to 448: score 211.6, E = 1.7e-60 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr +++ lG+Gsf tVyk+ + t +VA ++ rk + ++++ KIAA1760 190 LKFDIELGRGSFKTVYKGLDTETWVEVAWCELQDRKLTKLERQRFKE 236 lsEiqilkrLsHpNIvrlidvfed....kdhlylVlEycegGLrvldLfd E+++lk L+HpNIvr++d++e++ ++k+ + lV+E++ G L++ KIAA1760 237 --EAEMLKGLQHPNIVRFYDFWESsakgKRCIVLVTELMTSG----TLKT 280 ylsetrrkgpllfsedeakkialQilrgleYLHsn..giiHRDLKPeNIL yl+ r +++ +++++++++Qil+gl +LH +++ iiHRDLK +NI+ KIAA1760 281 YLK---RFKVM--KPKVLRSWCRQILKGLLFLHTRtpPIIHRDLKCDNIF 325 ld.nngvvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggn + + +g v Ki+D GlA +++ s ++++ GTp++mAPE + KIAA1760 326 ITgPTGSV----KIGDLGLAT---LkRASfAKSVIGTPEFMAPEM--YEE 366 gygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefd +y+ +vDv+++G + e++t + P+s++ + q++rk+ +++ + + KIAA1760 367 HYDESVDVYAFGMCMLEMATSEYPYSEC----QNAAQIYRKVTCGIKPAS 412 spewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf< +++ ++ +e k++i c++k+ ++R+ ++++l H +f KIAA1760 413 FEKVHD-------------PEIKEIIGECICKNKEERYEIKDLLSHAFF 448 -* KIAA1760 - - PF07714.7.fs: domain 1 of 1, from 190 to 404: score 81.7, E = 1.3e-23 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei lk++ +LG+G+F +VykG + +t ++VA L+ + + e KIAA1760 190 LKFDIELGRGSFKTVYKGLDT----ETWVEVAWCELqDR-KLTKLE- 230 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpg.lyiVtEymegG r+ F +EA+++k l +HpNiVr++ + + g+ + +VtE+m G KIAA1760 231 -RQRFKEEAEMLKGL-QHPNIVRFYDFWES-SAK-GKRcIVLVTELMTSG 276 dLldfLrkhregrpLtlkdLlsfalQiAkGMeYLeskn..fvHRDLAARN L+++L++ + + k L s+++Qi kG+ +L+ + ++++HRDL + N KIAA1760 277 TLKTYLKR---FKVMKPKVLRSWCRQILKGLLFLHTRTppIIHRDLKCDN 323 cLVsenl.vVKIsDFGLaRdiynddyYvrkkgggklPv...kWmAPEslk + ++ + + VKI+D GLa + r++ +k ++++ mAPE + KIAA1760 324 IFITGPTgSVKIGDLGLATLK-------RASF-AKSVIgtpEFMAPE--M 363 ygk.FtskSDVWSFGVlLWEiftlGeqPFYpgm.sneevlell<-* y +++ + DV++FG ++ E+ t e P Y +++ ++++ ++ KIAA1760 364 YEEhYDESVDVYAFGMCMLEMAT-SEYP-YSECqNAAQIYRKV 404 PF00069.15.ls: domain 1 of 1, from 190 to 448: score 213.5, E = 4.5e-61 *->yelleklGsGsfGtVykakhkgtgkiVAvKiikkrkekskkdktarr +++ lG+Gsf tVyk+ + t +VA ++ rk + ++++ KIAA1760 190 LKFDIELGRGSFKTVYKGLDTETWVEVAWCELQDRKLTKLERQRFKE 236 lsEiqilkrLsHpNIvrlidvfed....kdhlylVlEycegGLrvldLfd E+++lk L+HpNIvr++d++e++ ++k+ + lV+E++ G L++ KIAA1760 237 --EAEMLKGLQHPNIVRFYDFWESsakgKRCIVLVTELMTSG----TLKT 280 ylsetrrkgpllfsedeakkialQilrgleYLHsn..giiHRDLKPeNIL yl+ r +++ +++++++++Qil+gl +LH +++ iiHRDLK +NI+ KIAA1760 281 YLK---RFKVM--KPKVLRSWCRQILKGLLFLHTRtpPIIHRDLKCDNIF 325 ld.nngvvdaflKiaDFGlAkklst.sss.lttfvGTpwYmAPEvllggn + + +g v Ki+D GlA +++ s ++++ GTp++mAPE + KIAA1760 326 ITgPTGSV----KIGDLGLAT---LkRASfAKSVIGTPEFMAPEM--YEE 366 gygtkvDvWSlGvilyelltGkpPFsgevqdsldqlqlirkilgpplefd +y+ +vDv+++G + e++t + P+s++ + q++rk+ +++ + + KIAA1760 367 HYDESVDVYAFGMCMLEMATSEYPYSEC----QNAAQIYRKVTCGIKPAS 412 spewdsisrsefrrlpnlseeakdLikkcLnkDPskRltaeeilqHPwf< +++ ++ +e k++i c++k+ ++R+ ++++l H +f KIAA1760 413 FEKVHD-------------PEIKEIIGECICKNKEERYEIKDLLSHAFF 448 -* KIAA1760 - - PF07714.7.ls: domain 1 of 1, from 190 to 448: score 77.0, E = 5.4e-20 *->lklgkkLGeGaFGeVykGtlkgsgdgteikVAVKtL.keigaseeei lk++ +LG+G+F +VykG + +t ++VA L+ + + e KIAA1760 190 LKFDIELGRGSFKTVYKGLDT----ETWVEVAWCELqDR-KLTKLE- 230 eredFlrEAsiMkklGdHpNiVrLlGvctkegePggpg.lyiVtEymegG r+ F +EA+++k l +HpNiVr++ + + g+ + +VtE+m G KIAA1760 231 -RQRFKEEAEMLKGL-QHPNIVRFYDFWES-SAK-GKRcIVLVTELMTSG 276 dLldfLrkhregrpLtlkdLlsfalQiAkGMeYLeskn..fvHRDLAARN L+++L++ + + k L s+++Qi kG+ +L+ + ++++HRDL + N KIAA1760 277 TLKTYLKR---FKVMKPKVLRSWCRQILKGLLFLHTRTppIIHRDLKCDN 323 cLVsenl.vVKIsDFGLaRdiynddyYvrkkgggklPv...kWmAPEslk + ++ + + VKI+D GLa + r++ +k ++++ mAPE + KIAA1760 324 IFITGPTgSVKIGDLGLATLK-------RASF-AKSVIgtpEFMAPE--M 363 ygk.FtskSDVWSFGVlLWEiftlGeqPFYpgm.sneevlellyedGyRL y +++ + DV++FG ++ E+ t e P Y +++ ++++ +++ KIAA1760 364 YEEhYDESVDVYAFGMCMLEMAT-SEYP-YSECqNAAQIYRKVTCGIKPA 411 prPenCPdelYdlMlqCWaedPedRPtFsel..veeL<-* + +e+ +++ +C ++ e+R ++l ++ ++ KIAA1760 412 SFEKVHDPEIKEIIGECICKNKEERYEIKDLlsHAFF 448 //