hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11384086/chunk_1/iprscan-20080502-11384086.nocrc
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Query sequence: KIAA1748
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
PF01529.11.ls DHHC zinc finger domain                        120.0    6.2e-33   1
PF01529.11.fs DHHC zinc finger domain                        118.0    7.4e-33   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
PF01529.11.fs   1/1     138   202 ..     1    66 []   118.0  7.4e-33
PF01529.11.ls   1/1     138   202 ..     1    66 []   120.0  6.2e-33

Alignments of top-scoring domains:
PF01529.11.fs: domain 1 of 1, from 138 to 202: score 118.0, E = 7.4e-33
                   *->ldndkfikdnfCskCnsyKVPpRShHCsvCnkCVlrmDHHCpWinnC
                      + +++  + ++C +C++y+ PpR++HCsvC++CV+ +DHHCpW+nnC
    KIAA1748   138    EIKGIQVRMKWCATCRFYR-PPRCSHCSVCDNCVEEFDHHCPWVNNC 183  

                   VGlrNyryFllFlfylill<-*
                   +G+rNyryF+lFl++l+ +   
    KIAA1748   184 IGRRNYRYFFLFLLSLTAH    202  

PF01529.11.ls: domain 1 of 1, from 138 to 202: score 120.0, E = 6.2e-33
                   *->ldndkfikdnfCskCnsyKVPpRShHCsvCnkCVlrmDHHCpWinnC
                      + +++  + ++C +C++y+ PpR++HCsvC++CV+ +DHHCpW+nnC
    KIAA1748   138    EIKGIQVRMKWCATCRFYR-PPRCSHCSVCDNCVEEFDHHCPWVNNC 183  

                   VGlrNyryFllFlfylill<-*
                   +G+rNyryF+lFl++l+ +   
    KIAA1748   184 IGRRNYRYFFLFLLSLTAH    202  

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