hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-11333438/chunk_1/iprscan-20080502-11333438.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1745
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00630                                                 637.5   4.2e-187   1
SM00423                                                  41.8      9e-08   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00630    1/1     126   563 ..     1   532 []   637.5 4.2e-187
SM00423    1/1     581   635 ..     1    56 []    41.8    9e-08

Alignments of top-scoring domains:
SM00630: domain 1 of 1, from 126 to 563: score 637.5, E = 4.2e-187
                   *->fnhllldedsgierlyVGArNriysLslpnlsllsevvtgpvldwps
                      +++lll++d++  +lyVGAr+++++Ls +nls l  ++++  l w +
    KIAA1745   126    YTALLLSRDGR--TLYVGAREALFALS-SNLSFLPGGEYQELL-WGA 168  

                   ceepnekclkceeCaakgkeeCssneteCdNyirvLlvdndhiadthLyv
                     e      k++ C+ kgk    +++++C+Nyi++Ll+ +     +hL++
    KIAA1745   169 DAE------KKQQCSFKGK----DPQRDCQNYIKILLPLSG----SHLFT 204  

                   CGTnafgPdVtCrlinlgdlepadeseaedqiltlclyskevnlsesgrg
                   CGT af+P  +C++in+++             +tl+ ++k + l+e+g+g
    KIAA1745   205 CGTAAFSP--MCTYINMEN-------------FTLARDEKGNVLLEDGKG 239  

                   kCPydPlgsstsvvvdggvPgggeLYsgtsadfsgvalsysssdpiifRs
                   +CP+dP+  st++vvdg      eLY+gt+  f g        dp+i+Rs
    KIAA1745   240 RCPFDPNFKSTALVVDG------ELYTGTVSSFQG-------NDPAISRS 276  

                   lgttqdgfefefhslrttiydskwgydlnepnFVyaFeipes.g....dg
                           +++++   +t+++  w   l++p FV++++ipes g+ ++d+
    KIAA1745   277 --------QSLRPT--KTESSLNW---LQDPAFVASAYIPESlGslqgDD 313  

                   dfVYFFFrEtaveainrdcssekavvsRVARvCknDvGGqrlLqkkWtSF
                   d++YFFF+Et  e+    +++e ++vsR+AR+Ck+D+GG+r+Lq++WtSF
    KIAA1745   314 DKIYFFFSETGQEF----EFFENTIVSRIARICKGDEGGERVLQQRWTSF 359  

                   LKarLnCsvpgkggvrefyFneLQavfllppGaLArelgiesddvlYgVF
                   LKa+L Cs p+ g    f+Fn+LQ+vf l p       ++ +d+++YgVF
    KIAA1745   360 LKAQLLCSRPDDG----FPFNVLQDVFTLSP----SPQDW-RDTLFYGVF 400  

                   sqgqqtssrdaanpipgSAVCaFslkdInavFneGpfkcyegpnsawlpv
                   +  +q+ +    +++ gSAVC+F++kd+++vF+ G +k+ ++++++w +v
    KIAA1745   401 T--SQWHR----GTTEGSAVCVFTMKDVQRVFS-GLYKEVNRETQQWYTV 443  

                   egnkvPyprPGtCisntfregrndssskdlPddvlnfikdhpLmdeavpP
                   ++ +vP prPG Ci+n++re r++ ss+ lPd+vlnf kdh+Lmd+ v  
    KIAA1745   444 TH-PVPTPRPGACITNSARE-RKINSSLQLPDRVLNFLKDHFLMDGQVR- 490  

                   ltgrPllvktgtdyrlTsiaVdrvrgldGgkneytVlFlGTsdGrvlKvv
                     +r ll +++++y  +++aV+rv gl+ +   y+VlFlGT dGr++K+v
    KIAA1745   491 --SRMLLLQPQARY--QRVAVHRVPGLHHT---YDVLFLGTGDGRLHKAV 533  

                   vsrsssssssaglesvlleelqvfppgsepirdmvlsskk<-*
                   +          g+ ++++eelq+f+ g +p+++++l++++   
    KIAA1745   534 S---------VGPRVHIIEELQIFSSG-QPVQNLLLDTHR    563  

SM00423: domain 1 of 1, from 581 to 635: score 41.8, E = 9e-08
                   *->rCsqygvtsCseCllardpygCgWCssegrCtrg......erCderr
                      +Cs y  +sC++Cllardpy C+W   ++ C + +  +++ ++ +  
    KIAA1745   581    NCSLY--RSCGDCLLARDPY-CAWS--GSSCKHVslyqpqLATRP-- 620  

                   gsrqnwssg.pssqCp<-*
                    ++q+++ ++  + C+   
    KIAA1745   621 -WIQDIEGAsAKDLCS    635  

//