hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
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HMM file:                 /db/iprscan/data/smart.HMMs.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10553446/chunk_1/iprscan-20080502-10553446.nocrc
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Query sequence: KIAA1723
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model    Description                                    Score    E-value  N 
-------- -----------                                    -----    ------- ---
SM00234                                                 209.4    3.1e-58   1
SM00324                                                 204.1    1.2e-56   1

Parsed for domains:
Model    Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
-------- ------- ----- -----    ----- -----      -----  -------
SM00324    1/1    1115  1307 ..     1   193 []   204.1  1.2e-56
SM00234    1/1    1349  1550 ..     1   248 []   209.4  3.1e-58

Alignments of top-scoring domains:
SM00324: domain 1 of 1, from 1115 to 1307: score 204.1, E = 1.2e-56
                   *->spiPiivekCieylekrGldteGIYRvsGsksrvkeLreafdsged.
                      +p+P+ ++++++yl++++ld++G++R+sG+ksr+++Lr++ +   d 
    KIAA1723  1115    QPLPQSIQQAMRYLRNHCLDQVGLFRKSGVKSRIQALRQMNEGAIDc 1161 

                   dldsldesiteesedleeydvhdvAglLKlyLReLPePLltfelyeefie
                   +             ++e ++++dvA++LK+y+R+LPePL+t +l+e f++
    KIAA1723  1162 V-------------NYEGQSAYDVADMLKQYFRDLPEPLMTNKLSETFLQ 1198 

                   aaklyqieatsrkqseksedeeerlralrellslLPpanratLryLl.HL
                   +++                 +++rl+a++ ++ lLP++nr++L+ Ll +L
    KIAA1723  1199 IYQY--------------VPKDQRLQAIKAAIMLLPDENREVLQTLLyFL 1234 

                   nrVaehsevNkMtarNLAivFgPtLlrpp.....................
                   + V +  ++N Mt+ NLA++++P+L++ ++ ++++++++  +++++ +++
    KIAA1723  1235 SDVTAAVKENQMTPTNLAVCLAPSLFHLNtlkrenssprvmqrkqslgkp 1284 

                   ....ltdikhqnkvvetlienad<-*
                   ++++l ++   ++ + ++i ++    
    KIAA1723  1285 dqkdLNENLAATQGLAHMIAECK    1307 

SM00234: domain 1 of 1, from 1349 to 1550: score 209.4, E = 3.1e-58
                   *->evaeeaanellklaassekgWvlspetgeiengdevlsiledgqnpk
                      ++ +++  +l+k++++++kgWv+++  ++++ ++ + +         
    KIAA1723  1349    HFLQDCVDGLFKEVKEKFKGWVSYS--TSEQAELSYKKVS------- 1386 

                   qglkvsgealravgvvpmvcaedlvaellddgey.rkeWdknfagivska
                        +g +lr+++ v++v+a  +++e+l+++++++++Wd ++     + 
    KIAA1723  1387 -----EGPPLRLWRSVIEVPA--VPEEILKRLLKeQHLWDVDLL----DS 1425 

                   evvevissgtGgnrngviyhyvaksvapgpvsPtRDfvfvRywreddeHR
                   +v+e ++s+      ++iy+yv++s+a  p+++ RD+v++R wr +    
    KIAA1723  1426 KVIEILDSQ------TEIYQYVQNSMA--PHPA-RDYVVLRTWRTN---- 1462 

                   alvdgsyvivsvSvthetspptGpssgvvRaellpsgllieplgngpekd
                    l+ g +++++ Sv+h++ p       +vR+++l+s++liep+g g+   
    KIAA1723  1463 -LPKGACALLLTSVDHDRAP-----VVGVRVNVLLSRYLIEPCGPGK--- 1503 

                   dvkskvtwvsqaDlkGwlPvvhwllrsliksglaefaktRDsvatlqksc
                      sk+t+++++Dl+G++P  +w+ +s+++ ++ae++k+RDs+ ++  ++
    KIAA1723  1504 ---SKLTYMCRVDLRGHMP--EWYTKSFGHLCAAEVVKIRDSFSNQNTET 1548 

                   ek<-*
                   ++   
    KIAA1723  1549 KD    1550 

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