hmmpfam - search one or more sequences against HMM database
HMMER 2.3.2 (Oct 2003)
Copyright (C) 1992-2003 HHMI/Washington University School of Medicine
Freely distributed under the GNU General Public License (GPL)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
HMM file:                 /db/iprscan/data/Pfam.bin
Sequence file:            /db/iprscan/tmp/20080502/iprscan-20080502-10145567/chunk_1/iprscan-20080502-10145567.nocrc
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Query sequence: KIAA1700
Accession:      [none]
Description:    [none]

Scores for sequence family classification (score includes all domains):
Model         Description                               Score    E-value  N 
--------      -----------                               -----    ------- ---
PF00782.11.ls Dual specificity phosphatase, catalytic   245.4    1.1e-70   1
PF00782.11.fs Dual specificity phosphatase, catalytic   243.5    4.1e-70   1
PF00581.10.fs Rhodanese-like domain                      49.0    2.3e-14   1
PF00581.10.ls Rhodanese-like domain                      50.9    3.9e-12   1
PF00102.17.fs Protein-tyrosine phosphatase               17.4    0.00015   1

Parsed for domains:
Model         Domain  seq-f seq-t    hmm-f hmm-t      score  E-value
--------      ------- ----- -----    ----- -----      -----  -------
PF00581.10.fs   1/1      36   156 ..     1   132 []    49.0  2.3e-14
PF00581.10.ls   1/1      36   156 ..     1   132 []    50.9  3.9e-12
PF00782.11.fs   1/1     183   322 ..     1   173 []   243.5  4.1e-70
PF00782.11.ls   1/1     183   322 ..     1   173 []   245.4  1.1e-70
PF00102.17.fs   1/1     252   285 ..   179   232 ..    17.4  0.00015

Alignments of top-scoring domains:
PF00581.10.fs: domain 1 of 1, from 36 to 156: score 49.0, E = 2.3e-14
                   *->tagelkalles.apkliliDvRspefGeryeyegGHIpgAvNvplee
                      + + l alles+ +k++liD R++      ey+ +HI  A+N++   
    KIAA1700    36    VTERLVALLESgTEKVLLIDSRPF-----VEYNTSHILEAININCSK 77   

                   eiealldrsgilpdieklhllkdpeelaklfgelgsskd..krvivycrs
                   + +  l ++  l             el++    ++++ d + +v+vy++s
    KIAA1700    78 LMKRRLQQDKVL-----------ITELIQHSAKHKVDIDcsQKVVVYDQS 116  

                   grdl.lrnrrsalaalllkklg.ypeVyiLkGGykeWlak<-*
                   + d+   + ++ l +ll k+  +++ V++L GG+ e++++   
    KIAA1700   117 SQDVaSLSSDCFLTVLLGKLEKsFNSVHLLAGGFAEFSRC    156  

PF00581.10.ls: domain 1 of 1, from 36 to 156: score 50.9, E = 3.9e-12
                   *->tagelkalles.apkliliDvRspefGeryeyegGHIpgAvNvplee
                      + + l alles+ +k++liD R++      ey+ +HI  A+N++   
    KIAA1700    36    VTERLVALLESgTEKVLLIDSRPF-----VEYNTSHILEAININCSK 77   

                   eiealldrsgilpdieklhllkdpeelaklfgelgsskd..krvivycrs
                   + +  l ++  l             el++    ++++ d + +v+vy++s
    KIAA1700    78 LMKRRLQQDKVL-----------ITELIQHSAKHKVDIDcsQKVVVYDQS 116  

                   grdl.lrnrrsalaalllkklg.ypeVyiLkGGykeWlak<-*
                   + d+   + ++ l +ll k+  +++ V++L GG+ e++++   
    KIAA1700   117 SQDVaSLSSDCFLTVLLGKLEKsFNSVHLLAGGFAEFSRC    156  

PF00782.11.fs: domain 1 of 1, from 183 to 322: score 243.5, E = 4.1e-70
                   *->gpveilphnlYLGsystasadlaflsklgItyviNvteevpnpfelc
                      gp++ilp+ lYLG++ +++ ++++++++gI yv+N+++ +p+p+++ 
    KIAA1700   183    GPTRILPN-LYLGCQRDVL-NKELMQQNGIGYVLNASNTCPKPDFI- 226  

                   kNdRhyteayflknsgilylriPhveDhIeYyhiawnhetkiskylpeav
                                 ++ ++lr+P v+D         ++++ki ++l+++v
    KIAA1700   227 --------------PESHFLRVP-VND---------SFCEKILPWLDKSV 252  

                   eFIdkarqkggkVLVHCqAGiSRSAtliiAYLMktrnmslneAysfvyvY
                   +FI+ka++++g VLVHC+AGiSRSAt++iAY+Mk++ msl+eAy+fv   
    KIAA1700   253 DFIEKAKASNGCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFV--- 299  

                   hikerRcpaisPNfgFlrQLleyerk<-*
                     ke+R p isPNf+Fl+QLl+ye+k   
    KIAA1700   300 --KEKR-PTISPNFNFLGQLLDYEKK    322  

PF00782.11.ls: domain 1 of 1, from 183 to 322: score 245.4, E = 1.1e-70
                   *->gpveilphnlYLGsystasadlaflsklgItyviNvteevpnpfelc
                      gp++ilp+ lYLG++ +++ ++++++++gI yv+N+++ +p+p+++ 
    KIAA1700   183    GPTRILPN-LYLGCQRDVL-NKELMQQNGIGYVLNASNTCPKPDFI- 226  

                   kNdRhyteayflknsgilylriPhveDhIeYyhiawnhetkiskylpeav
                                 ++ ++lr+P v+D         ++++ki ++l+++v
    KIAA1700   227 --------------PESHFLRVP-VND---------SFCEKILPWLDKSV 252  

                   eFIdkarqkggkVLVHCqAGiSRSAtliiAYLMktrnmslneAysfvyvY
                   +FI+ka++++g VLVHC+AGiSRSAt++iAY+Mk++ msl+eAy+fv   
    KIAA1700   253 DFIEKAKASNGCVLVHCLAGISRSATIAIAYIMKRMDMSLDEAYRFV--- 299  

                   hikerRcpaisPNfgFlrQLleyerk<-*
                     ke+R p isPNf+Fl+QLl+ye+k   
    KIAA1700   300 --KEKR-PTISPNFNFLGQLLDYEKK    322  

PF00102.17.fs: domain 1 of 1, from 252 to 285: score 17.4, E = 0.00015
                   *->ldllrkvrksqpsnvelgerspdsgprSystaPivVHCSAGvGRTGt
                      +d+++k + s++                     ++VHC AG++R++t
    KIAA1700   252    VDFIEKAKASNG--------------------CVLVHCLAGISRSAT 278  

                   fiaidil<-*
                   ++ + i+   
    KIAA1700   279 IAIAYIM    285  

//